Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005055.1

Orthogroup ID

OG0000822

Physical Location & Seq

Genomic Coordinates Forward (+)

8099 .. 11501

Gene Structure 3403 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005055.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1473 bp

atgctgcagctcctctctgggtgcgacggagcgacggggcctgccggacggacatgtctgcagtcggtggagttgccggcaacgtggttgcagcacttcccagaaacctgcaactccgacctcctccgacctcaaacactgcccagaactatccggggtgcctccggcctccgtcagccaagccccgagccgcctggaacgccgttgctacgtcatcgtccacactttagcaaagtgcggacgtccgctttggaacaggcctcactgctctgcagcccaggaatgggccatctgatcatccctttgctcgagctcggaaagcgacttgtcgtccaccaaaacttcatcggcacaatcttcgtcgtcccttccaacacttccaaggtcgaaagactcgaaaccgagctcctccaggcagacgcagtcctcgaaaccatcgaactcccgccaccagacatttccggcgtcgctaaccctgatgctgacgtcgtcacccgcatagcggcaacgatgcgagaagtacgaccagcgtttcggtcagctctgaacgacatgaagctctgtcctaccatgctcattgtggacttcttcggcacagaatctctgcccattgccgaagagtttgggatttccaagtacgtctatattgcttccattgcatggttcctttctctcatgacggctcttgcttcaagtgatggaattttactaaacatatgggaggagctcgagccgaagacactggcatcacttagatctgagaaactcctgggccgatttacgaaggtgccagtttatccaatcgggccattgatcaggcccaaatccaatgcatcatttggtccaaaggagaaggtattgtttgattggctagacaagcagcccaacgagtcagtaacggttacgacttacgacgatgacaataacccattgaagttcatgcctaaggggttcttggcaatggcggatccaggattggaaccttggggtgcccgtttatccaatcgggccattaatcaggcccaaatccaatgcatcatttggtccaaaggagaaggtattgtaacggttacgacttacgacgatgacaataacccattaaagttcatgcctaaggggttcttggatcggaccaggggcattggtcttgtcatccctgtatgggctcctcaagtggacatcttggcgcatcgatcagtgtatgtagatccgccactggttcttggatcggaccaggggcattggtcttgtcatccctgtatgggctcctcaagtggacatcttggcgcatcgatcagtcggagggtttttgtcacattgtggatggaactcaacattggagagcatcgccaatggagtgccgatgattgcttggccgctctacgccgagcagaggatgagcgccacgttgctgacggaggagcttggcgtggcagttcggtcgaggaaacagccgtgggagagggtggttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044

KEGG Pathways

Metabolic & Signaling

ko00940 map00940

Pfam Domains

Protein Families

UDPGT

Protein Analysis

490

Amino Acids

53.75

Weight (kDa)

5.73

Isoelectric Point (pI)

43.38

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000822)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G18560 AT2G18570 AT3G50740 AT5G26310 AT5G66690
fragaria_vesca	FvH4_1g14012 FvH4_1g14013
malus_domestica	MD02G1153000.v1.1 MD02G1153100.v1.1 MD02G1153200.v1.1 MD02G1153300.v1.1 MD02G1153400.v1.1 MD02G1153500.v1.1 MD02G1153700.v1.1 MD02G1153800.v1.1 MD02G1153900.v1.1 MD15G1267300.v1.1
prunus_persica	Prupe.7G149100_v2.0.a1 Prupe.7G149200_v2.0.a1
pyrus_communis	pycom02g12070 pycom02g12100 pycom02g12110 pycom15g23300
rosa_chinensis	RchiOBHm_Chr2g0102351 RchiOBHm_Chr2g0102361 RchiOBHm_Chr2g0102371 RchiOBHm_Chr2g0102411 RchiOBHm_Chr2g0102421 RchiOBHm_Chr2g0102591
rosa_laevigata	RLG00000017148 RLG00000017157 RLG00000029634 RLG00000029636
rosa_multiflora	Rmu_co8411463.1_g000001 Rmu_sc0003277.1_g000008 Rmu_sc0003804.1_g000011 Rmu_sc0003804.1_g000024 Rmu_sc0003804.1_g000033 Rmu_sc0005055.1_g000003
rosa_roxburghii	Rroxscaffold_2G00140450 Rroxscaffold_2G00140510 Rroxscaffold_2G00140530
rosa_rugosa	Rorug02G0106900 Rorug02G0107200 Rorug02G0107600 Rorug02G0107900
rosa_samantha	Rh2AG154800 Rh2AG155000 Rh2AG155200 Rh2AG155800 Rh2AG156900 Rh2BG161000 Rh2BG161400 Rh2BG161600 Rh2BG162200 Rh2BG163200 Rh2CG160500 Rh2CG160600 Rh2CG160900 Rh2CG162000 Rh2DG160400 Rh2DG160600 Rh2DG160800 Rh2DG161300 Rh2DG161500 Rh2DG162100
rosa_wichuraiana	Rw2G012120 Rw2G012170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	54
AatII	GACGTC	2 cut(s)	245, 489
Acc36I	ACCTGC	1 cut(s)	116
AccB1I	GGYRCC	3 cut(s)	158, 787, 989
AccB7I	CCANNNNNTGG	1 cut(s)	660
AccBSI	CCGCTC	1 cut(s)	1379
AciI	CCGC	9 cut(s)	191, 238, 246, 446, 496, 503, 965, 1211, 1377
AclWI	GGATC	5 cut(s)	962, 975, 1134, 1202, 1234
AcoI	YGGCCR	1 cut(s)	1374
AcsI	RAATTY	1 cut(s)	702
AcyI	GRCGYC	3 cut(s)	242, 465, 486
AdeI	CACNNNGTG	1 cut(s)	1320
AfaI	GTAC	2 cut(s)	522, 638
AfiI	CCNNNNNNNGG	7 cut(s)	283, 284, 502, 660, 1162, 1262, 1393
AflIII	ACRYGT	1 cut(s)	53
AgsI	TTSAA	2 cut(s)	693, 934
AhdI	GACNNNNNGTC	1 cut(s)	329
AjnI	CCWGG	7 cut(s)	193, 277, 411, 768, 970, 1133, 1233
AjuI	GAANNNNNNNTTGG	2 cut(s)	1320, 1352
AluBI	AGCT	7 cut(s)	10, 313, 406, 542, 559, 727, 1424
AluI	AGCT	7 cut(s)	10, 313, 406, 542, 559, 727, 1424
Alw21I	GWGCWC	3 cut(s)	315, 408, 729
AlwI	GGATC	5 cut(s)	962, 975, 1134, 1202, 1234
Ama87I	CYCGRG	3 cut(s)	185, 308, 728
ApeKI	GCWGC	5 cut(s)	4, 7, 91, 273, 880
ApoI	RAATTY	1 cut(s)	702
ArsI	GACNNNNNNTTYG	4 cut(s)	232, 264, 516, 548
AseI	ATTAAT	1 cut(s)	1014
AspLEI	GCGC	3 cut(s)	1189, 1289, 1404
AsuC2I	CCSGG	1 cut(s)	155
AsuHPI	GGTGA	1 cut(s)	484
AvaI	CYCGRG	3 cut(s)	185, 308, 728
AvaII	GGWCC	4 cut(s)	842, 1044, 1131, 1231
AxyI	CCTNAGG	2 cut(s)	945, 1113
BaeGI	GKGCMC	1 cut(s)	994
BamHI	GGATCC	1 cut(s)	967
BanI	GGYRCC	3 cut(s)	158, 787, 989
BanII	GRGCYC	5 cut(s)	315, 408, 729, 1168, 1268
BbsI	GAAGAC	1 cut(s)	743
Bbv12I	GWGCWC	3 cut(s)	315, 408, 729
BbvI	GCAGC	4 cut(s)	19, 103, 285, 892
BccI	CCATC	4 cut(s)	297, 443, 692, 1318
BceAI	ACGGC	3 cut(s)	187, 696, 1439
BcgI	CGANNNNNNTGC	4 cut(s)	340, 374, 1423, 1457
BciT130I	CCWGG	7 cut(s)	195, 279, 413, 770, 972, 1135, 1235
BclI	TGATCA	2 cut(s)	294, 813
BcnI	CCSGG	1 cut(s)	155
BfaI	CTAG	1 cut(s)	872
BfmI	CTRYAG	3 cut(s)	5, 59, 271
BfoI	RGCGCY	1 cut(s)	1405
BfuAI	ACCTGC	1 cut(s)	116
BglII	AGATCT	1 cut(s)	755
BisI	GCNGC	8 cut(s)	5, 8, 92, 191, 274, 504, 881, 1377
BlsI	GCNGC	8 cut(s)	6, 9, 93, 192, 275, 505, 882, 1378
Bme1390I	CCNGG	8 cut(s)	155, 195, 279, 413, 770, 972, 1135, 1235
Bme18I	GGWCC	4 cut(s)	842, 1044, 1131, 1231
BmeRI	GACNNNNNGTC	1 cut(s)	329
BmeT110I	CYCGRG	3 cut(s)	185, 308, 728
BmiI	GGNNCC	9 cut(s)	39, 160, 665, 789, 969, 981, 991, 1167, 1267
BmrFI	CCNGG	8 cut(s)	155, 195, 279, 413, 770, 972, 1135, 1235
BmsI	GCATC	8 cut(s)	469, 501, 755, 842, 1044, 1198, 1298, 1354
BpiI	GAAGAC	1 cut(s)	743
BpmI	CTGGAG	1 cut(s)	395
BpuEI	CTTGAG	2 cut(s)	1155, 1255
BpuMI	CCSGG	1 cut(s)	155
Bsa29I	ATCGAT	2 cut(s)	1192, 1292
BsaHI	GRCGYC	3 cut(s)	242, 465, 486
BsaJI	CCNNGG	8 cut(s)	154, 277, 381, 769, 983, 1134, 1234, 1455
Bsc4I	CCNNNNNNNGG	7 cut(s)	283, 284, 502, 660, 1162, 1262, 1393
Bse118I	RCCGGY	1 cut(s)	76
Bse1I	ACTGG	3 cut(s)	747, 791, 1221
Bse21I	CCTNAGG	2 cut(s)	945, 1113
Bse3DI	GCAATG	3 cut(s)	609, 654, 966
BseBI	CCWGG	7 cut(s)	195, 279, 413, 770, 972, 1135, 1235
BseCI	ATCGAT	2 cut(s)	1192, 1292
BseDI	CCNNGG	8 cut(s)	154, 277, 381, 769, 983, 1134, 1234, 1455
BseGI	GGATG	5 cut(s)	297, 1152, 1252, 1329, 1402
BseLI	CCNNNNNNNGG	7 cut(s)	283, 284, 502, 660, 1162, 1262, 1393
BseMI	GCAATG	3 cut(s)	609, 654, 966
BseMII	CTCAG	1 cut(s)	750
BseNI	ACTGG	3 cut(s)	747, 791, 1221
BseRI	GAGGAG	6 cut(s)	113, 398, 737, 1158, 1258, 1434
BseSI	GKGCMC	1 cut(s)	994
BseXI	GCAGC	4 cut(s)	19, 103, 285, 892
Bsh1285I	CGRYCG	1 cut(s)	1443
BshNI	GGYRCC	3 cut(s)	158, 787, 989
BshVI	ATCGAT	2 cut(s)	1192, 1292
BsiEI	CGRYCG	1 cut(s)	1443
BsiHKAI	GWGCWC	3 cut(s)	315, 408, 729
BsiHKCI	CYCGRG	3 cut(s)	185, 308, 728
BsiSI	CCGG	5 cut(s)	45, 77, 154, 165, 462
BslFI	GGGAC	1 cut(s)	350
BslI	CCNNNNNNNGG	7 cut(s)	283, 284, 502, 660, 1162, 1262, 1393
BsmFI	GGGAC	1 cut(s)	350
BsoBI	CYCGRG	3 cut(s)	185, 308, 728
Bsp1286I	GDGCHC	6 cut(s)	315, 408, 729, 994, 1168, 1268
Bsp143I	GATC	9 cut(s)	294, 755, 813, 967, 1126, 1193, 1207, 1226, 1293
BspACI	CCGC	9 cut(s)	191, 238, 246, 446, 496, 503, 965, 1211, 1377
BspCNI	CTCAG	1 cut(s)	751
BspDI	ATCGAT	2 cut(s)	1192, 1292
BspHI	TCATGA	1 cut(s)	675
BspLI	GGNNCC	9 cut(s)	39, 160, 665, 789, 969, 981, 991, 1167, 1267
BspMAI	CTGCAG	3 cut(s)	9, 63, 275
BspMI	ACCTGC	1 cut(s)	116
BspPI	GGATC	5 cut(s)	962, 975, 1134, 1202, 1234
BspT107I	GGYRCC	3 cut(s)	158, 787, 989
BsrBI	CCGCTC	1 cut(s)	1379
BsrDI	GCAATG	3 cut(s)	609, 654, 966
BsrFI	RCCGGY	1 cut(s)	76
BsrI	ACTGG	3 cut(s)	747, 791, 1221
BssAI	RCCGGY	1 cut(s)	76
BssECI	CCNNGG	8 cut(s)	154, 277, 381, 769, 983, 1134, 1234, 1455
BssMI	GATC	9 cut(s)	294, 755, 813, 967, 1126, 1193, 1207, 1226, 1293
BssNI	GRCGYC	3 cut(s)	242, 465, 486
BssT1I	CCWWGG	2 cut(s)	381, 983
Bst2UI	CCWGG	7 cut(s)	195, 279, 413, 770, 972, 1135, 1235
Bst4CI	ACNGT	2 cut(s)	901, 1069
Bst6I	CTCTTC	1 cut(s)	612
BstACI	GRCGYC	3 cut(s)	242, 465, 486
BstC8I	GCNNGC	2 cut(s)	42, 78
BstDEI	CTNAG	4 cut(s)	752, 759, 945, 1113
BstDSI	CCRYGG	1 cut(s)	1455
BstF5I	GGATG	5 cut(s)	297, 1152, 1252, 1329, 1402
BstH2I	RGCGCY	1 cut(s)	1405
BstHHI	GCGC	3 cut(s)	1189, 1289, 1404
BstKTI	GATC	9 cut(s)	297, 758, 816, 970, 1129, 1196, 1210, 1229, 1296
BstMBI	GATC	9 cut(s)	294, 755, 813, 967, 1126, 1193, 1207, 1226, 1293
BstMCI	CGRYCG	1 cut(s)	1443
BstMWI	GCNNNNNNNGC	4 cut(s)	199, 319, 656, 877
BstNI	CCWGG	7 cut(s)	195, 279, 413, 770, 972, 1135, 1235
BstNSI	RCATGY	1 cut(s)	57
BstSCI	CCNGG	8 cut(s)	153, 193, 277, 411, 768, 970, 1133, 1233
BstSFI	CTRYAG	3 cut(s)	5, 59, 271
BstSLI	GKGCMC	1 cut(s)	994
BstV1I	GCAGC	4 cut(s)	19, 103, 285, 892
BstV2I	GAAGAC	1 cut(s)	743
BstX2I	RGATCY	3 cut(s)	755, 967, 1207
BstYI	RGATCY	3 cut(s)	755, 967, 1207
Bsu15I	ATCGAT	2 cut(s)	1192, 1292
Bsu36I	CCTNAGG	2 cut(s)	945, 1113
BsuTUI	ATCGAT	2 cut(s)	1192, 1292
BtgI	CCRYGG	1 cut(s)	1455
BtgZI	GCGATG	1 cut(s)	1331
BtsCI	GGATG	5 cut(s)	297, 1152, 1252, 1329, 1402
BtsI	GCAGTG	2 cut(s)	137, 263
BtsIMutI	CAGTG	5 cut(s)	137, 263, 740, 1203, 1214
BveI	ACCTGC	1 cut(s)	116
Cac8I	GCNNGC	2 cut(s)	42, 78
CciI	TCATGA	1 cut(s)	675
CfoI	GCGC	3 cut(s)	1189, 1289, 1404
Cfr10I	RCCGGY	1 cut(s)	76
ClaI	ATCGAT	2 cut(s)	1192, 1292
CseI	GACGC	2 cut(s)	428, 454
Csp6I	GTAC	2 cut(s)	521, 637
CviAII	CATG	7 cut(s)	54, 553, 571, 660, 676, 940, 1108
CviQI	GTAC	2 cut(s)	521, 637
DdeI	CTNAG	4 cut(s)	752, 759, 945, 1113
DpnI	GATC	9 cut(s)	296, 757, 815, 969, 1128, 1195, 1209, 1228, 1295
DpnII	GATC	9 cut(s)	294, 755, 813, 967, 1126, 1193, 1207, 1226, 1293
DraIII	CACNNNGTG	1 cut(s)	1320
DrdI	GACNNNNNNGTC	1 cut(s)	54
DriI	GACNNNNNGTC	1 cut(s)	329
DseDI	GACNNNNNNGTC	1 cut(s)	54
EaeI	YGGCCR	1 cut(s)	1374
Eam1104I	CTCTTC	1 cut(s)	612
Eam1105I	GACNNNNNGTC	1 cut(s)	329
EarI	CTCTTC	1 cut(s)	612
EciI	GGCGGA	2 cut(s)	980, 1200
Ecl136II	GAGCTC	3 cut(s)	313, 406, 727
Eco130I	CCWWGG	2 cut(s)	381, 983
Eco147I	AGGCCT	1 cut(s)	260
Eco24I	GRGCYC	5 cut(s)	315, 408, 729, 1168, 1268
Eco47I	GGWCC	4 cut(s)	842, 1044, 1131, 1231
Eco53kI	GAGCTC	3 cut(s)	313, 406, 727
Eco81I	CCTNAGG	2 cut(s)	945, 1113
Eco88I	CYCGRG	3 cut(s)	185, 308, 728
EcoICRI	GAGCTC	3 cut(s)	313, 406, 727
EcoO109I	RGGNCCY	1 cut(s)	38
EcoRII	CCWGG	7 cut(s)	193, 277, 411, 768, 970, 1133, 1233
EcoT14I	CCWWGG	2 cut(s)	381, 983
EcoT22I	ATGCAT	2 cut(s)	835, 1037
EcoT38I	GRGCYC	5 cut(s)	315, 408, 729, 1168, 1268
ErhI	CCWWGG	2 cut(s)	381, 983
FaeI	CATG	7 cut(s)	57, 556, 574, 663, 679, 943, 1111
FalI	AAGNNNNNCTT	4 cut(s)	938, 970, 1106, 1138
FaqI	GGGAC	1 cut(s)	350
FatI	CATG	7 cut(s)	53, 552, 570, 659, 675, 939, 1107
FauI	CCCGC	2 cut(s)	453, 503
FauNDI	CATATG	1 cut(s)	716
FbaI	TGATCA	2 cut(s)	294, 813
Fnu4HI	GCNGC	8 cut(s)	5, 8, 92, 191, 274, 504, 881, 1377
FokI	GGATG	5 cut(s)	284, 1139, 1239, 1336, 1409
FriOI	GRGCYC	5 cut(s)	315, 408, 729, 1168, 1268
Fsp4HI	GCNGC	8 cut(s)	5, 8, 92, 191, 274, 504, 881, 1377
FspBI	CTAG	1 cut(s)	872
GlaI	GCGC	3 cut(s)	1188, 1288, 1403
GluI	GCNGC	8 cut(s)	5, 8, 92, 191, 274, 504, 881, 1377
GsuI	CTGGAG	1 cut(s)	395
HaeII	RGCGCY	1 cut(s)	1405
HapII	CCGG	5 cut(s)	45, 77, 154, 165, 462
HgaI	GACGC	2 cut(s)	428, 454
HhaI	GCGC	3 cut(s)	1189, 1289, 1404
Hin1I	GRCGYC	3 cut(s)	242, 465, 486
Hin1II	CATG	7 cut(s)	57, 556, 574, 663, 679, 943, 1111
Hin6I	GCGC	3 cut(s)	1187, 1287, 1402
HinP1I	GCGC	3 cut(s)	1187, 1287, 1402
HinfI	GANTC	3 cut(s)	393, 599, 890
HpaII	CCGG	5 cut(s)	45, 77, 154, 165, 462
HphI	GGTGA	1 cut(s)	484
Hpy166II	GTNNAC	5 cut(s)	221, 334, 583, 1177, 1277
Hpy188I	TCNGA	9 cut(s)	118, 128, 294, 317, 546, 760, 1131, 1231, 1302
Hpy188III	TCNNGA	1 cut(s)	676
Hpy8I	GTNNAC	5 cut(s)	221, 334, 583, 1177, 1277
Hpy99I	CGWCG	7 cut(s)	29, 37, 365, 470, 491, 917, 1085
HpyAV	CCTTC	4 cut(s)	378, 778, 847, 1049
HpyCH4III	ACNGT	2 cut(s)	901, 1069
HpyCH4IV	ACGT	6 cut(s)	83, 211, 242, 486, 639, 1407
HpyCH4V	TGCA	8 cut(s)	7, 61, 91, 111, 273, 659, 833, 1035
HpyF10VI	GCNNNNNNNGC	4 cut(s)	199, 319, 656, 877
HpyF3I	CTNAG	4 cut(s)	752, 759, 945, 1113
HpySE526I	ACGT	6 cut(s)	83, 211, 242, 486, 639, 1407
Hsp92I	GRCGYC	3 cut(s)	242, 465, 486
Hsp92II	CATG	7 cut(s)	57, 556, 574, 663, 679, 943, 1111
HspAI	GCGC	3 cut(s)	1187, 1287, 1402
KroI	GCCGGC	1 cut(s)	76
KroNI	GCCGGC	1 cut(s)	78
Ksp22I	TGATCA	2 cut(s)	294, 813
Kzo9I	GATC	9 cut(s)	294, 755, 813, 967, 1126, 1193, 1207, 1226, 1293
LmnI	GCTCC	7 cut(s)	15, 29, 411, 724, 1171, 1271, 1421
Lsp1109I	GCAGC	4 cut(s)	19, 103, 285, 892
LweI	GCATC	8 cut(s)	469, 501, 755, 842, 1044, 1198, 1298, 1354
MaeI	CTAG	1 cut(s)	872
MaeII	ACGT	6 cut(s)	83, 211, 242, 486, 639, 1407
MaeIII	GTNAC	6 cut(s)	490, 895, 901, 1063, 1069, 1312
MalI	GATC	9 cut(s)	296, 757, 815, 969, 1128, 1195, 1209, 1228, 1295
MbiI	CCGCTC	1 cut(s)	1379
MboI	GATC	9 cut(s)	294, 755, 813, 967, 1126, 1193, 1207, 1226, 1293
MboII	GAAGA	4 cut(s)	349, 580, 629, 748
MflI	RGATCY	3 cut(s)	755, 967, 1207
MhlI	GDGCHC	6 cut(s)	315, 408, 729, 994, 1168, 1268
MluCI	AATT	1 cut(s)	702
MlyI	GAGTC	2 cut(s)	387, 899
MmeI	TCCRAC	4 cut(s)	141, 151, 396, 1280
Mph1103I	ATGCAT	2 cut(s)	835, 1037
MroNI	GCCGGC	1 cut(s)	76
MseI	TTAA	2 cut(s)	1014, 1100
MspI	CCGG	5 cut(s)	45, 77, 154, 165, 462
MspR9I	CCNGG	8 cut(s)	155, 195, 279, 413, 770, 972, 1135, 1235
MvaI	CCWGG	7 cut(s)	195, 279, 413, 770, 972, 1135, 1235
MwoI	GCNNNNNNNGC	4 cut(s)	199, 319, 656, 877
NaeI	GCCGGC	1 cut(s)	78
NciI	CCSGG	1 cut(s)	155
NdeI	CATATG	1 cut(s)	716
NdeII	GATC	9 cut(s)	294, 755, 813, 967, 1126, 1193, 1207, 1226, 1293
NgoMIV	GCCGGC	1 cut(s)	76
NlaIII	CATG	7 cut(s)	57, 556, 574, 663, 679, 943, 1111
NlaIV	GGNNCC	9 cut(s)	39, 160, 665, 789, 969, 981, 991, 1167, 1267
NmeAIII	GCCGAG	1 cut(s)	1412
NmuCI	GTSAC	2 cut(s)	490, 1312
NsiI	ATGCAT	2 cut(s)	835, 1037
NspI	RCATGY	1 cut(s)	57
PaeR7I	CTCGAG	2 cut(s)	308, 728
PagI	TCATGA	1 cut(s)	675
PceI	AGGCCT	1 cut(s)	260
PciI	ACATGT	1 cut(s)	53
PcsI	WCGNNNNNNNCGW	3 cut(s)	393, 426, 435
PdiI	GCCGGC	1 cut(s)	78
PfeI	GAWTC	1 cut(s)	599
PflFI	GACNNNGTC	2 cut(s)	422, 488
PflMI	CCANNNNNTGG	1 cut(s)	660
PfoI	TCCNGGA	1 cut(s)	970
PkrI	GCNGC	8 cut(s)	6, 9, 93, 192, 275, 505, 882, 1378
PleI	GAGTC	2 cut(s)	387, 898
PpsI	GAGTC	2 cut(s)	387, 898
PscI	ACATGT	1 cut(s)	53
PshBI	ATTAAT	1 cut(s)	1014
Psp124BI	GAGCTC	3 cut(s)	315, 408, 729
Psp6I	CCWGG	7 cut(s)	193, 277, 411, 768, 970, 1133, 1233
PspGI	CCWGG	7 cut(s)	193, 277, 411, 768, 970, 1133, 1233
PspN4I	GGNNCC	9 cut(s)	39, 160, 665, 789, 969, 981, 991, 1167, 1267
PspXI	VCTCGAGB	2 cut(s)	308, 728
PstI	CTGCAG	3 cut(s)	9, 63, 275
PsuI	RGATCY	3 cut(s)	755, 967, 1207
PsyI	GACNNNGTC	2 cut(s)	422, 488
RsaI	GTAC	2 cut(s)	522, 638
RsaNI	GTAC	2 cut(s)	521, 637
SacI	GAGCTC	3 cut(s)	315, 408, 729
SaqAI	TTAA	2 cut(s)	1014, 1100
SatI	GCNGC	8 cut(s)	5, 8, 92, 191, 274, 504, 881, 1377
Sau3AI	GATC	9 cut(s)	294, 755, 813, 967, 1126, 1193, 1207, 1226, 1293
SchI	GAGTC	2 cut(s)	387, 899
ScrFI	CCNGG	8 cut(s)	155, 195, 279, 413, 770, 972, 1135, 1235
SduI	GDGCHC	6 cut(s)	315, 408, 729, 994, 1168, 1268
SfaNI	GCATC	8 cut(s)	469, 501, 755, 842, 1044, 1198, 1298, 1354
SfcI	CTRYAG	3 cut(s)	5, 59, 271
Sfr274I	CTCGAG	2 cut(s)	308, 728
SinI	GGWCC	4 cut(s)	842, 1044, 1131, 1231
SlaI	CTCGAG	2 cut(s)	308, 728
SmlI	CTYRAG	4 cut(s)	308, 728, 1170, 1270
SmoI	CTYRAG	4 cut(s)	308, 728, 1170, 1270
Sse9I	AATT	1 cut(s)	702
SseBI	AGGCCT	1 cut(s)	260
SsiI	CCGC	9 cut(s)	191, 238, 246, 446, 496, 503, 965, 1211, 1377
SspMI	CTAG	1 cut(s)	872
SstI	GAGCTC	3 cut(s)	315, 408, 729
StuI	AGGCCT	1 cut(s)	260
StyD4I	CCNGG	8 cut(s)	153, 193, 277, 411, 768, 970, 1133, 1233
StyI	CCWWGG	2 cut(s)	381, 983
TaaI	ACNGT	2 cut(s)	901, 1069
TaiI	ACGT	6 cut(s)	86, 214, 245, 489, 642, 1410
TaqI	TCGA	9 cut(s)	309, 387, 396, 429, 438, 729, 1192, 1292, 1443
TaqII	GACCGA	2 cut(s)	525, 1429
TasI	AATT	1 cut(s)	702
TauI	GCSGC	3 cut(s)	193, 506, 1379
TfiI	GAWTC	1 cut(s)	599
Tru1I	TTAA	2 cut(s)	1014, 1100
Tru9I	TTAA	2 cut(s)	1014, 1100
TscAI	CASTG	5 cut(s)	144, 270, 747, 1203, 1221
TseFI	GTSAC	2 cut(s)	490, 1312
TseI	GCWGC	5 cut(s)	4, 7, 91, 273, 880
Tsp45I	GTSAC	2 cut(s)	490, 1312
TspDTI	ATGAA	4 cut(s)	334, 569, 928, 1096
TspGWI	ACGGA	4 cut(s)	42, 64, 161, 1431
TspRI	CASTG	5 cut(s)	144, 270, 747, 1203, 1221
Tth111I	GACNNNGTC	2 cut(s)	422, 488
Van91I	CCANNNNNTGG	1 cut(s)	660
VpaK11BI	GGWCC	4 cut(s)	842, 1044, 1131, 1231
VspI	ATTAAT	1 cut(s)	1014
XapI	RAATTY	1 cut(s)	702
XceI	RCATGY	1 cut(s)	57
XcmI	CCANNNNNNNNNTGG	1 cut(s)	577
XhoI	CTCGAG	2 cut(s)	308, 728
XspI	CTAG	1 cut(s)	872
ZraI	GACGTC	2 cut(s)	243, 487
Zsp2I	ATGCAT	2 cut(s)	835, 1037

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.