Rh2CG160500

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000822
Physical Location & Seq
Reverse (-)
14031578 .. 14031895
318 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG160500.1

Sequence Viewer

Length: 318 bp
ATGAAGCTCTGTCCTACCATGCTCATTGTGGACTTCTTCGGCACAGAATCTCTGCCCATTGCCGAAGAGTTTGGGATTTCCAAGTACGTCTACATTGCTTCCAATGCATGGTTCCTTTCTCTCATGGTTTATTCTCCTACATTGGATGAAGAAGTGAAAGGAGAATTCGTTGACGAGAAAGAGCCGCTGAAAATCCCTGGTTGTAGGTCTGTACATCCCCAAATCGACATCGTCGACGGCATGCAGGACAGAACTAGCCAACAATACAACGAGCATTTGGGGATCGCCAGACGGCTCTTGCTTCAAGTGATGGAATAG

Protein Analysis

105

Amino Acids

12.01

Weight (kDa)

4.71

Isoelectric Point (pI)

30.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 108
AccI GTMKAC 2 cut(s) 90, 234
AciI CCGC 1 cut(s) 185
AclWI GGATC 1 cut(s) 290
AcsI RAATTY 1 cut(s) 164
AfaI GTAC 2 cut(s) 86, 213
AfiI CCNNNNNNNGG 1 cut(s) 108
AgsI TTSAA 1 cut(s) 305
AjnI CCWGG 1 cut(s) 196
AjuI GAANNNNNNNTTGG 2 cut(s) 95, 127
AluBI AGCT 1 cut(s) 7
AluI AGCT 1 cut(s) 7
AlwI GGATC 1 cut(s) 290
ApoI RAATTY 1 cut(s) 164
BccI CCATC 1 cut(s) 304
BceAI ACGGC 2 cut(s) 253, 308
BciT130I CCWGG 1 cut(s) 198
BfaI CTAG 1 cut(s) 255
BisI GCNGC 1 cut(s) 185
BlsI GCNGC 1 cut(s) 186
Bme1390I CCNGG 1 cut(s) 198
BmiI GGNNCC 1 cut(s) 113
BmrFI CCNGG 1 cut(s) 198
BsaJI CCNNGG 1 cut(s) 196
BsaXI ACNNNNNCTCC 2 cut(s) 153, 183
Bsc4I CCNNNNNNNGG 1 cut(s) 108
Bse3DI GCAATG 2 cut(s) 57, 93
BseBI CCWGG 1 cut(s) 198
BseDI CCNNGG 1 cut(s) 196
BseGI GGATG 2 cut(s) 151, 214
BseLI CCNNNNNNNGG 1 cut(s) 108
BseMI GCAATG 2 cut(s) 57, 93
BslI CCNNNNNNNGG 1 cut(s) 108
Bsp1407I TGTACA 1 cut(s) 211
Bsp143I GATC 1 cut(s) 282
BspACI CCGC 1 cut(s) 185
BspLI GGNNCC 1 cut(s) 113
BspPI GGATC 1 cut(s) 290
BsrDI GCAATG 2 cut(s) 57, 93
BsrGI TGTACA 1 cut(s) 211
BssECI CCNNGG 1 cut(s) 196
BssMI GATC 1 cut(s) 282
Bst2UI CCWGG 1 cut(s) 198
Bst6I CTCTTC 1 cut(s) 60
BstAUI TGTACA 1 cut(s) 211
BstC8I GCNNGC 1 cut(s) 242
BstF5I GGATG 2 cut(s) 151, 214
BstKTI GATC 1 cut(s) 285
BstMBI GATC 1 cut(s) 282
BstMWI GCNNNNNNNGC 1 cut(s) 104
BstNI CCWGG 1 cut(s) 198
BstNSI RCATGY 1 cut(s) 244
BstSCI CCNGG 1 cut(s) 196
BtsCI GGATG 2 cut(s) 151, 214
Cac8I GCNNGC 1 cut(s) 242
Csp6I GTAC 2 cut(s) 85, 212
CviAII CATG 4 cut(s) 19, 108, 124, 241
CviJI RGCY 4 cut(s) 7, 184, 258, 295
CviKI_1 RGCY 4 cut(s) 7, 184, 258, 295
CviQI GTAC 2 cut(s) 85, 212
DpnI GATC 1 cut(s) 284
DpnII GATC 1 cut(s) 282
Eam1104I CTCTTC 1 cut(s) 60
EarI CTCTTC 1 cut(s) 60
EcoRI GAATTC 1 cut(s) 164
EcoRII CCWGG 1 cut(s) 196
EcoT22I ATGCAT 1 cut(s) 109
FaeI CATG 4 cut(s) 22, 111, 127, 244
FaiI YATR 4 cut(s) 20, 109, 125, 242
FatI CATG 4 cut(s) 18, 107, 123, 240
FblI GTMKAC 2 cut(s) 90, 234
Fnu4HI GCNGC 1 cut(s) 185
FokI GGATG 2 cut(s) 158, 201
Fsp4HI GCNGC 1 cut(s) 185
FspBI CTAG 1 cut(s) 255
GluI GCNGC 1 cut(s) 185
Hin1II CATG 4 cut(s) 22, 111, 127, 244
HincII GTYRAC 2 cut(s) 172, 235
HindII GTYRAC 2 cut(s) 172, 235
HinfI GANTC 1 cut(s) 47
Hpy166II GTNNAC 4 cut(s) 31, 91, 172, 235
Hpy8I GTNNAC 4 cut(s) 31, 91, 172, 235
Hpy99I CGWCG 2 cut(s) 236, 239
HpyCH4IV ACGT 1 cut(s) 87
HpyCH4V TGCA 2 cut(s) 107, 244
HpyF10VI GCNNNNNNNGC 1 cut(s) 104
HpySE526I ACGT 1 cut(s) 87
Hsp92II CATG 4 cut(s) 22, 111, 127, 244
Kzo9I GATC 1 cut(s) 282
LpnPI CCDG 4 cut(s) 183, 210, 230, 301
MaeI CTAG 1 cut(s) 255
MaeII ACGT 1 cut(s) 87
MalI GATC 1 cut(s) 284
MboI GATC 1 cut(s) 282
MboII GAAGA 3 cut(s) 28, 77, 161
MluCI AATT 1 cut(s) 164
Mph1103I ATGCAT 1 cut(s) 109
MspA1I CMGCKG 1 cut(s) 187
MspR9I CCNGG 1 cut(s) 198
MvaI CCWGG 1 cut(s) 198
MwoI GCNNNNNNNGC 1 cut(s) 104
NdeII GATC 1 cut(s) 282
NlaIII CATG 4 cut(s) 22, 111, 127, 244
NlaIV GGNNCC 1 cut(s) 113
NsiI ATGCAT 1 cut(s) 109
NspI RCATGY 1 cut(s) 244
PaeI GCATGC 1 cut(s) 244
PcsI WCGNNNNNNNCGW 1 cut(s) 231
PfeI GAWTC 1 cut(s) 47
PflFI GACNNNGTC 1 cut(s) 230
PflMI CCANNNNNTGG 1 cut(s) 108
PkrI GCNGC 1 cut(s) 186
Psp6I CCWGG 1 cut(s) 196
PspGI CCWGG 1 cut(s) 196
PspN4I GGNNCC 1 cut(s) 113
PsyI GACNNNGTC 1 cut(s) 230
RsaI GTAC 2 cut(s) 86, 213
RsaNI GTAC 2 cut(s) 85, 212
SalI GTCGAC 1 cut(s) 233
SatI GCNGC 1 cut(s) 185
Sau3AI GATC 1 cut(s) 282
ScrFI CCNGG 1 cut(s) 198
SetI ASST 3 cut(s) 9, 90, 209
SgrDI CGTCGACG 1 cut(s) 233
SphI GCATGC 1 cut(s) 244
Sse9I AATT 1 cut(s) 164
SsiI CCGC 1 cut(s) 185
SspMI CTAG 1 cut(s) 255
StyD4I CCNGG 1 cut(s) 196
TaiI ACGT 1 cut(s) 90
TaqI TCGA 2 cut(s) 225, 234
TasI AATT 1 cut(s) 164
TatI WGTACW 1 cut(s) 211
TauI GCSGC 1 cut(s) 187
TfiI GAWTC 1 cut(s) 47
TspDTI ATGAA 2 cut(s) 17, 162
Tth111I GACNNNGTC 1 cut(s) 230
Van91I CCANNNNNTGG 1 cut(s) 108
XapI RAATTY 1 cut(s) 164
XceI RCATGY 1 cut(s) 244
XcmI CCANNNNNNNNNTGG 1 cut(s) 25
XmiI GTMKAC 2 cut(s) 90, 234
XspI CTAG 1 cut(s) 255
Zsp2I ATGCAT 1 cut(s) 109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.