MD02G1153800.v1.1

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
Physical Location & Seq
Reverse (-)
12748518 .. 12748745
228 bp
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UTR
Exon/CDS
Intron
MD02G1153800.v1.1.491

Sequence Viewer

Length: 228 bp
ATGATGCGTGAAGCACGACATGCGTTTCTGTCAGCCATACTTGGAATAGAGTTTTCTTTTCGTCCTATAGTGCTTATCGTGGACCTCTTCAGCACCGAATCTCTGTCTATCGACGACGAGCTTGGGATTCCTAAGTACGTTTACATTGCTAGCACTGCATGGTTCATAGCCTTGACTGTCTACATGCCAGTTTTTGATAAAGAAGTGGAAGGAGAGTACGTGGACTAG

Protein Analysis

76

Amino Acids

8.58

Weight (kDa)

4.37

Isoelectric Point (pI)

30.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 180
AcuI CTGAAG 1 cut(s) 73
AfaI GTAC 2 cut(s) 137, 218
AluBI AGCT 1 cut(s) 121
AluI AGCT 1 cut(s) 121
AspS9I GGNCC 1 cut(s) 82
AsuNHI GCTAGC 1 cut(s) 149
AvaII GGWCC 1 cut(s) 82
BfaI CTAG 2 cut(s) 150, 226
BfmI CTRYAG 1 cut(s) 66
Bme18I GGWCC 1 cut(s) 82
BmgT120I GGNCC 1 cut(s) 82
BmtI GCTAGC 1 cut(s) 153
BsaAI YACGTR 1 cut(s) 220
BsaXI ACNNNNNCTCC 1 cut(s) 204
Bse1I ACTGG 1 cut(s) 188
Bse3DI GCAATG 1 cut(s) 144
BseMI GCAATG 1 cut(s) 144
BseNI ACTGG 1 cut(s) 188
BspOI GCTAGC 1 cut(s) 153
BsrDI GCAATG 1 cut(s) 144
BsrI ACTGG 1 cut(s) 188
Bst4CI ACNGT 1 cut(s) 178
Bst6I CTCTTC 1 cut(s) 92
BstAPI GCANNNNNTGC 1 cut(s) 20
BstBAI YACGTR 1 cut(s) 220
BstC8I GCNNGC 1 cut(s) 151
BstDEI CTNAG 1 cut(s) 132
BstMWI GCNNNNNNNGC 2 cut(s) 20, 155
BstNSI RCATGY 2 cut(s) 23, 187
BstSFI CTRYAG 1 cut(s) 66
BtsI GCAGTG 1 cut(s) 153
BtsIMutI CAGTG 1 cut(s) 153
Cac8I GCNNGC 1 cut(s) 151
Cfr13I GGNCC 1 cut(s) 82
Csp6I GTAC 2 cut(s) 136, 217
CviAII CATG 3 cut(s) 20, 159, 184
CviJI RGCY 3 cut(s) 35, 121, 170
CviKI_1 RGCY 3 cut(s) 35, 121, 170
CviQI GTAC 2 cut(s) 136, 217
DdeI CTNAG 1 cut(s) 132
Eam1104I CTCTTC 1 cut(s) 92
EarI CTCTTC 1 cut(s) 92
Eco47I GGWCC 1 cut(s) 82
Eco57I CTGAAG 1 cut(s) 73
FaeI CATG 3 cut(s) 23, 162, 187
FaiI YATR 6 cut(s) 21, 38, 68, 160, 167, 185
FatI CATG 3 cut(s) 19, 158, 183
FblI GTMKAC 1 cut(s) 180
FspBI CTAG 2 cut(s) 150, 226
Hin1II CATG 3 cut(s) 23, 162, 187
HinfI GANTC 2 cut(s) 98, 127
Hpy166II GTNNAC 4 cut(s) 82, 142, 181, 223
Hpy8I GTNNAC 4 cut(s) 82, 142, 181, 223
Hpy99I CGWCG 2 cut(s) 116, 119
HpyAV CCTTC 1 cut(s) 203
HpyCH4III ACNGT 1 cut(s) 178
HpyCH4IV ACGT 2 cut(s) 138, 219
HpyCH4V TGCA 1 cut(s) 158
HpyF10VI GCNNNNNNNGC 2 cut(s) 20, 155
HpyF3I CTNAG 1 cut(s) 132
HpySE526I ACGT 2 cut(s) 138, 219
Hsp92II CATG 3 cut(s) 23, 162, 187
LpnPI CCDG 1 cut(s) 201
MaeI CTAG 2 cut(s) 150, 226
MaeII ACGT 2 cut(s) 138, 219
MboII GAAGA 1 cut(s) 79
MnlI CCTC 1 cut(s) 95
MwoI GCNNNNNNNGC 2 cut(s) 20, 155
NheI GCTAGC 1 cut(s) 149
NlaIII CATG 3 cut(s) 23, 162, 187
NspI RCATGY 2 cut(s) 23, 187
PfeI GAWTC 2 cut(s) 98, 127
Ppu21I YACGTR 1 cut(s) 220
PspPI GGNCC 1 cut(s) 82
RsaI GTAC 2 cut(s) 137, 218
RsaNI GTAC 2 cut(s) 136, 217
Sau96I GGNCC 1 cut(s) 82
SetI ASST 4 cut(s) 87, 123, 141, 222
SfcI CTRYAG 1 cut(s) 66
SinI GGWCC 1 cut(s) 82
SspMI CTAG 2 cut(s) 150, 226
TaaI ACNGT 1 cut(s) 178
TaiI ACGT 2 cut(s) 141, 222
TaqI TCGA 1 cut(s) 111
TfiI GAWTC 2 cut(s) 98, 127
TscAI CASTG 1 cut(s) 160
TspDTI ATGAA 1 cut(s) 154
TspRI CASTG 1 cut(s) 160
VpaK11BI GGWCC 1 cut(s) 82
XceI RCATGY 2 cut(s) 23, 187
XmiI GTMKAC 1 cut(s) 180
XspI CTAG 2 cut(s) 150, 226
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.