Rh2DG160800

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Reverse (-)
13695771 .. 13696073
303 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG160800.1

Sequence Viewer

Length: 303 bp
ATGCTGATGGGAAGAGGAATCCCAAAGGGTGATGGGATTTTGATAAACATATGGGAGGAACTAGAGCCCAAGTCCCTCGCAGCACTAAGAGATGAGAAATTCTTGGGCCGATTTGCGAATGTGCCTGTCTTTCCAATTGGGCCGTTGATGAGGCCCAACGTGTATTCCAGCTTGAGGGGTGATGTGTTTGATTGGCTAGATGAGCAGCCCAATGAATCTGTGATTTACGTGTCCTTTGGAAGCGGTGGGGCCCTGTCGTATGAACAAATGGTCGAGCTAGCTTGGGGTTTGGAGATGAGTTAA

Protein Analysis

100

Amino Acids

11.16

Weight (kDa)

4.45

Isoelectric Point (pI)

42.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 243
AcsI RAATTY 1 cut(s) 98
AfiI CCNNNNNNNGG 1 cut(s) 174
AflIII ACRYGT 2 cut(s) 159, 228
AluBI AGCT 3 cut(s) 171, 277, 281
AluI AGCT 3 cut(s) 171, 277, 281
AoxI GGCC 4 cut(s) 106, 140, 152, 249
ApaI GGGCCC 1 cut(s) 253
ApeKI GCWGC 2 cut(s) 80, 205
ApoI RAATTY 1 cut(s) 98
AspS9I GGNCC 5 cut(s) 106, 140, 153, 249, 250
AsuHPI GGTGA 2 cut(s) 41, 191
AsuNHI GCTAGC 1 cut(s) 277
BaeGI GKGCMC 1 cut(s) 253
BanII GRGCYC 2 cut(s) 69, 253
BbvI GCAGC 2 cut(s) 92, 217
BccI CCATC 1 cut(s) 26
BceAI ACGGC 1 cut(s) 127
BfaI CTAG 3 cut(s) 62, 197, 278
BisI GCNGC 2 cut(s) 81, 206
BlsI GCNGC 2 cut(s) 82, 207
BmgT120I GGNCC 5 cut(s) 106, 140, 153, 249, 250
BmiI GGNNCC 2 cut(s) 250, 251
BmtI GCTAGC 1 cut(s) 281
BpuEI CTTGAG 1 cut(s) 193
BsaAI YACGTR 1 cut(s) 229
Bsc4I CCNNNNNNNGG 1 cut(s) 174
BseLI CCNNNNNNNGG 1 cut(s) 174
BseSI GKGCMC 1 cut(s) 253
BseXI GCAGC 2 cut(s) 92, 217
BshFI GGCC 4 cut(s) 108, 142, 154, 251
BslFI GGGAC 1 cut(s) 58
BslI CCNNNNNNNGG 1 cut(s) 174
BsmFI GGGAC 1 cut(s) 58
BsnI GGCC 4 cut(s) 108, 142, 154, 251
Bsp120I GGGCCC 1 cut(s) 249
Bsp1286I GDGCHC 2 cut(s) 69, 253
BspACI CCGC 1 cut(s) 243
BspANI GGCC 4 cut(s) 108, 142, 154, 251
BspLI GGNNCC 2 cut(s) 250, 251
BspOI GCTAGC 1 cut(s) 281
Bst6I CTCTTC 1 cut(s) 7
BstBAI YACGTR 1 cut(s) 229
BstC8I GCNNGC 1 cut(s) 279
BstDEI CTNAG 1 cut(s) 86
BstMWI GCNNNNNNNGC 1 cut(s) 202
BstSLI GKGCMC 1 cut(s) 253
BstV1I GCAGC 2 cut(s) 92, 217
BsuRI GGCC 4 cut(s) 108, 142, 154, 251
Cac8I GCNNGC 1 cut(s) 279
Cfr13I GGNCC 5 cut(s) 106, 140, 153, 249, 250
DdeI CTNAG 1 cut(s) 86
Eam1104I CTCTTC 1 cut(s) 7
EarI CTCTTC 1 cut(s) 7
Eco24I GRGCYC 2 cut(s) 69, 253
EcoO109I RGGNCCY 2 cut(s) 249, 250
EcoT38I GRGCYC 2 cut(s) 69, 253
FaiI YATR 3 cut(s) 50, 52, 261
FaqI GGGAC 1 cut(s) 58
FauNDI CATATG 1 cut(s) 50
Fnu4HI GCNGC 2 cut(s) 81, 206
FriOI GRGCYC 2 cut(s) 69, 253
Fsp4HI GCNGC 2 cut(s) 81, 206
FspBI CTAG 3 cut(s) 62, 197, 278
GluI GCNGC 2 cut(s) 81, 206
HaeIII GGCC 4 cut(s) 108, 142, 154, 251
HinfI GANTC 2 cut(s) 18, 215
HphI GGTGA 2 cut(s) 41, 191
HpyCH4IV ACGT 2 cut(s) 159, 228
HpyF10VI GCNNNNNNNGC 1 cut(s) 202
HpyF3I CTNAG 1 cut(s) 86
HpySE526I ACGT 2 cut(s) 159, 228
LpnPI CCDG 3 cut(s) 138, 181, 266
Lsp1109I GCAGC 2 cut(s) 92, 217
MaeI CTAG 3 cut(s) 62, 197, 278
MaeII ACGT 2 cut(s) 159, 228
MboII GAAGA 1 cut(s) 24
MfeI CAATTG 1 cut(s) 135
MhlI GDGCHC 2 cut(s) 69, 253
MluCI AATT 2 cut(s) 98, 135
MnlI CCTC 5 cut(s) 8, 49, 86, 144, 168
MseI TTAA 1 cut(s) 301
MunI CAATTG 1 cut(s) 135
MwoI GCNNNNNNNGC 1 cut(s) 202
NdeI CATATG 1 cut(s) 50
NheI GCTAGC 1 cut(s) 277
NlaIV GGNNCC 2 cut(s) 250, 251
PfeI GAWTC 2 cut(s) 18, 215
PkrI GCNGC 2 cut(s) 82, 207
Ppu21I YACGTR 1 cut(s) 229
PspN4I GGNNCC 2 cut(s) 250, 251
PspOMI GGGCCC 1 cut(s) 249
PspPI GGNCC 5 cut(s) 106, 140, 153, 249, 250
SaqAI TTAA 1 cut(s) 301
SatI GCNGC 2 cut(s) 81, 206
Sau96I GGNCC 5 cut(s) 106, 140, 153, 249, 250
SduI GDGCHC 2 cut(s) 69, 253
SetI ASST 5 cut(s) 162, 173, 231, 279, 283
SmlI CTYRAG 1 cut(s) 172
SmoI CTYRAG 1 cut(s) 172
Sse9I AATT 2 cut(s) 98, 135
SsiI CCGC 1 cut(s) 243
SspMI CTAG 3 cut(s) 62, 197, 278
TaiI ACGT 2 cut(s) 162, 231
TaqI TCGA 1 cut(s) 273
TasI AATT 2 cut(s) 98, 135
TfiI GAWTC 2 cut(s) 18, 215
Tru1I TTAA 1 cut(s) 301
Tru9I TTAA 1 cut(s) 301
TseI GCWGC 2 cut(s) 80, 205
TspDTI ATGAA 2 cut(s) 228, 276
XapI RAATTY 1 cut(s) 98
XspI CTAG 3 cut(s) 62, 197, 278
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.