Rroxscaffold_2G00140510

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
Physical Location & Seq
Forward (+)
78729588 .. 78731072
1485 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00140510.1

Sequence Viewer

Length: 1485 bp
ATGGAGATCACAAACCAGCATGCAGCATTACTCTGCAGCCCAGGTATGGGCCACCTCATCCCTGTCCTTGAGCTCGGGAAACGACTCGTCACCCACCAAAACTTCACTGTCACAATCTTCGTCCTCCCATTGCACACTTCCAAGGCCGAATATGAACTCCTCGACGCATCTGCCTTCCCACGTAGTCTGGACATCATCGAGCTCCCATCACCTGATGTTTCTGGCCTTGTCGACCCCGATGCTGTCGTCGTCACACGCCTCGCAGAAATGATGCGACAAGTACGATCTGCGTTTCGTGCCGCCTTACACGACATGATCAAGTTTCGTCATCGTCGCCCCACCATGCTCATCGTGGACCTATTCGGCACCGAATCTTTGCCCATTGCCGAGGAGTTTGGGATTCCAAAGTATGTGTACATTGCTTCCAACGCATGGTTCCTTTCTGTAATGATTTATTCTCCAACACTAGATGAGCAAGTCAAGGGTAAATTTGTTGACCTCGAAGATCCACTAGAAATTCCTGGATGTAGACAATTATTCCCAGAACTTGATATCGTTGACGCTTTGCTGGACCGGAGTAATCAACAGTACGACGAGCACATGCTGATGGGAAGAGGAATCCCAAAGGGTGATGGAATTTTGATAAACATATGGGAGGAACTAGAGCCCAAGTCCCTAGCAGCACTAAGAGATGAGAAATTCTTGGGCCGTTTTGCGAATGTGCCTGTCTTTCCAATTGGGCCTTTGATGAGGCCCAATGTATCTTCCAGCTTGAGGGGTGATGTGTTTGATTGGCTAGATGAGCAGCCTAATGACTCTGTGATTTACGTGTCCTTCGGAAGCGGTGGGGCCTTGTCGTATGAACAAATGGTCGAGCTAGCTTGGGGTTTGGAGATGAGTCAACAGAGGTTTGTTTGGGTCATCCGGCCGCCTATCATATCATCTGCCGACGAAATATTTTTCACGGCAGGGAATCACAATGGCGAGAACAACAATCTAACTAAATACTTGCCCAAGGGATTTTTGGGCCGAACCAAGGACATTGGGTTTATCATCCCTTTGTGGGCTCCACAAGTGGATATCTTGGCCCATCCATCAGTCGGAGGATTTTTGACACGTTGCGGGTGGAACTCAACCCTTGAAAGCATCACCAACGGAGTACCAATGATCGCTTGGCCGCTCTACGCTGAGCAGAGGTTGAATGCTACGTTGCTGACGGAGGAGCTAGGGGTGGCAGTTCGGTCAAAGATACCCCCATGGAAGAACGTGGTGGAGAGAGAAGAGTTAGAGGAAATGGTAAGGAAAATTATGGAGGACAAAGAAGGTTTTGCATTGAGAGATAGAGCCAAGAATCTTAAATTCAGTGGTGCAAAAGCTTTGGAACAAGGTGGTTCGTCTTATGATACTCTTTCTCAGTTCACTAAACATGCTGACATGTTCGTGCAATTTGCAAATGGTGCTGATCCTTCTTCCCTAGTTCCGTGA

Protein Analysis

494

Amino Acids

55.31

Weight (kDa)

5.09

Isoelectric Point (pI)

36.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 271 - 440 3.8e-20 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 365
AccB7I CCANNNNNTGG 1 cut(s) 432
AccBSI CCGCTC 1 cut(s) 1180
AccI GTMKAC 2 cut(s) 231, 529
AciI CCGC 5 cut(s) 300, 843, 929, 1122, 1178
AclWI GGATC 2 cut(s) 500, 1457
AcoI YGGCCR 2 cut(s) 926, 1175
AcsI RAATTY 5 cut(s) 488, 516, 636, 698, 1358
AfaI GTAC 4 cut(s) 282, 416, 590, 1161
AfiI CCNNNNNNNGG 7 cut(s) 46, 47, 432, 774, 1036, 1063, 1100
AflIII ACRYGT 3 cut(s) 828, 1115, 1434
AgsI TTSAA 2 cut(s) 1142, 1201
AjnI CCWGG 2 cut(s) 40, 520
AjuI GAANNNNNNNTTGG 2 cut(s) 419, 451
AluBI AGCT 7 cut(s) 73, 202, 771, 877, 881, 1225, 1376
AluI AGCT 7 cut(s) 73, 202, 771, 877, 881, 1225, 1376
Alw21I GWGCWC 3 cut(s) 75, 204, 600
AlwI GGATC 2 cut(s) 500, 1457
Ama87I CYCGRG 1 cut(s) 74
ApeKI GCWGC 4 cut(s) 23, 36, 680, 805
ApoI RAATTY 5 cut(s) 488, 516, 636, 698, 1358
AspS9I GGNCC 9 cut(s) 49, 355, 571, 706, 740, 753, 849, 1027, 1087
AsuHPI GGTGA 5 cut(s) 82, 201, 641, 791, 1141
AsuNHI GCTAGC 1 cut(s) 877
AvaI CYCGRG 1 cut(s) 74
AvaII GGWCC 2 cut(s) 355, 571
BanI GGYRCC 1 cut(s) 365
BanII GRGCYC 4 cut(s) 75, 204, 669, 1069
Bbv12I GWGCWC 3 cut(s) 75, 204, 600
BbvI GCAGC 4 cut(s) 35, 48, 692, 817
BccI CCATC 5 cut(s) 214, 601, 626, 1098, 1102
BceAI ACGGC 2 cut(s) 693, 981
BcgI CGANNNNNNTGC 4 cut(s) 152, 186, 221, 255
BciT130I CCWGG 2 cut(s) 42, 522
BclI TGATCA 1 cut(s) 315
BfaI CTAG 8 cut(s) 467, 512, 662, 677, 797, 878, 1226, 1475
BfmI CTRYAG 1 cut(s) 34
BisI GCNGC 7 cut(s) 24, 37, 300, 681, 806, 929, 1178
BlpI GCTNAGC 1 cut(s) 1188
BlsI GCNGC 7 cut(s) 25, 38, 301, 682, 807, 930, 1179
Bme1390I CCNGG 2 cut(s) 42, 522
Bme18I GGWCC 2 cut(s) 355, 571
BmeT110I CYCGRG 1 cut(s) 74
BmgT120I GGNCC 9 cut(s) 49, 355, 571, 706, 740, 753, 849, 1027, 1087
BmiI GGNNCC 4 cut(s) 367, 437, 850, 1068
BmrFI CCNGG 2 cut(s) 42, 522
BmsI GCATC 4 cut(s) 176, 229, 261, 1155
BmtI GCTAGC 1 cut(s) 881
Bpu1102I GCTNAGC 1 cut(s) 1188
BpuEI CTTGAG 2 cut(s) 89, 793
BsaAI YACGTR 2 cut(s) 182, 829
BsaJI CCNNGG 6 cut(s) 40, 141, 387, 1014, 1035, 1256
BsaWI WCCGGW 1 cut(s) 573
Bsc4I CCNNNNNNNGG 7 cut(s) 46, 47, 432, 774, 1036, 1063, 1100
Bse3DI GCAATG 3 cut(s) 128, 381, 417
BseBI CCWGG 2 cut(s) 42, 522
BseDI CCNNGG 6 cut(s) 40, 141, 387, 1014, 1035, 1256
BseGI GGATG 5 cut(s) 57, 530, 921, 1053, 1090
BseLI CCNNNNNNNGG 7 cut(s) 46, 47, 432, 774, 1036, 1063, 1100
BseMI GCAATG 3 cut(s) 128, 381, 417
BseMII CTCAG 2 cut(s) 1179, 1427
BseRI GAGGAG 3 cut(s) 149, 404, 1235
BseX3I CGGCCG 1 cut(s) 926
BseXI GCAGC 4 cut(s) 35, 48, 692, 817
Bsh1285I CGRYCG 1 cut(s) 929
BshNI GGYRCC 1 cut(s) 365
BsiEI CGRYCG 1 cut(s) 929
BsiHKAI GWGCWC 3 cut(s) 75, 204, 600
BsiHKCI CYCGRG 1 cut(s) 74
BsiSI CCGG 2 cut(s) 574, 925
BslFI GGGAC 1 cut(s) 658
BslI CCNNNNNNNGG 7 cut(s) 46, 47, 432, 774, 1036, 1063, 1100
BsmFI GGGAC 1 cut(s) 658
BsmI GAATGC 1 cut(s) 1207
BsoBI CYCGRG 1 cut(s) 74
Bsp1286I GDGCHC 5 cut(s) 75, 204, 600, 669, 1069
Bsp1407I TGTACA 1 cut(s) 414
Bsp143I GATC 6 cut(s) 6, 284, 315, 505, 1167, 1462
Bsp1720I GCTNAGC 1 cut(s) 1188
Bsp19I CCATGG 1 cut(s) 1256
BspACI CCGC 5 cut(s) 300, 843, 929, 1122, 1178
BspCNI CTCAG 2 cut(s) 1180, 1426
BspLI GGNNCC 4 cut(s) 367, 437, 850, 1068
BspMAI CTGCAG 1 cut(s) 38
BspOI GCTAGC 1 cut(s) 881
BspPI GGATC 2 cut(s) 500, 1457
BspT107I GGYRCC 1 cut(s) 365
BsrBI CCGCTC 1 cut(s) 1180
BsrDI GCAATG 3 cut(s) 128, 381, 417
BsrGI TGTACA 1 cut(s) 414
BssECI CCNNGG 6 cut(s) 40, 141, 387, 1014, 1035, 1256
BssMI GATC 6 cut(s) 6, 284, 315, 505, 1167, 1462
BssT1I CCWWGG 4 cut(s) 141, 1014, 1035, 1256
Bst2UI CCWGG 2 cut(s) 42, 522
Bst4CI ACNGT 2 cut(s) 109, 588
Bst6I CTCTTC 2 cut(s) 607, 1275
BstAPI GCANNNNNTGC 1 cut(s) 1457
BstAUI TGTACA 1 cut(s) 414
BstBAI YACGTR 2 cut(s) 182, 829
BstC8I GCNNGC 2 cut(s) 21, 879
BstDEI CTNAG 3 cut(s) 686, 1188, 1413
BstDSI CCRYGG 1 cut(s) 1256
BstF5I GGATG 5 cut(s) 57, 530, 921, 1053, 1090
BstKTI GATC 6 cut(s) 9, 287, 318, 508, 1170, 1465
BstMBI GATC 6 cut(s) 6, 284, 315, 505, 1167, 1462
BstMCI CGRYCG 1 cut(s) 929
BstMWI GCNNNNNNNGC 4 cut(s) 296, 428, 802, 1457
BstNI CCWGG 2 cut(s) 42, 522
BstNSI RCATGY 4 cut(s) 23, 604, 1430, 1438
BstSCI CCNGG 2 cut(s) 40, 520
BstSFI CTRYAG 1 cut(s) 34
BstV1I GCAGC 4 cut(s) 35, 48, 692, 817
BstX2I RGATCY 1 cut(s) 505
BstYI RGATCY 1 cut(s) 505
BstZI CGGCCG 1 cut(s) 926
BtgI CCRYGG 1 cut(s) 1256
BtsCI GGATG 5 cut(s) 57, 530, 921, 1053, 1090
BtsIMutI CAGTG 2 cut(s) 105, 1369
Cac8I GCNNGC 2 cut(s) 21, 879
Cfr13I GGNCC 9 cut(s) 49, 355, 571, 706, 740, 753, 849, 1027, 1087
CseI GACGC 2 cut(s) 173, 569
Csp6I GTAC 4 cut(s) 281, 415, 589, 1160
CviAII CATG 8 cut(s) 20, 313, 343, 432, 601, 1257, 1427, 1435
CviQI GTAC 4 cut(s) 281, 415, 589, 1160
DdeI CTNAG 3 cut(s) 686, 1188, 1413
DpnI GATC 6 cut(s) 8, 286, 317, 507, 1169, 1464
DpnII GATC 6 cut(s) 6, 284, 315, 505, 1167, 1462
EaeI YGGCCR 2 cut(s) 926, 1175
EagI CGGCCG 1 cut(s) 926
Eam1104I CTCTTC 2 cut(s) 607, 1275
EarI CTCTTC 2 cut(s) 607, 1275
Ecl136II GAGCTC 2 cut(s) 73, 202
EclXI CGGCCG 1 cut(s) 926
Eco130I CCWWGG 4 cut(s) 141, 1014, 1035, 1256
Eco24I GRGCYC 4 cut(s) 75, 204, 669, 1069
Eco32I GATATC 2 cut(s) 553, 1081
Eco47I GGWCC 2 cut(s) 355, 571
Eco52I CGGCCG 1 cut(s) 926
Eco53kI GAGCTC 2 cut(s) 73, 202
Eco88I CYCGRG 1 cut(s) 74
EcoICRI GAGCTC 2 cut(s) 73, 202
EcoO109I RGGNCCY 1 cut(s) 849
EcoRII CCWGG 2 cut(s) 40, 520
EcoRV GATATC 2 cut(s) 553, 1081
EcoT14I CCWWGG 4 cut(s) 141, 1014, 1035, 1256
EcoT38I GRGCYC 4 cut(s) 75, 204, 669, 1069
ErhI CCWWGG 4 cut(s) 141, 1014, 1035, 1256
FaeI CATG 8 cut(s) 23, 316, 346, 435, 604, 1260, 1430, 1438
FaqI GGGAC 1 cut(s) 658
FatI CATG 8 cut(s) 19, 312, 342, 431, 600, 1256, 1426, 1434
FauI CCCGC 1 cut(s) 1115
FauNDI CATATG 1 cut(s) 650
FbaI TGATCA 1 cut(s) 315
FblI GTMKAC 2 cut(s) 231, 529
Fnu4HI GCNGC 7 cut(s) 24, 37, 300, 681, 806, 929, 1178
FokI GGATG 5 cut(s) 44, 537, 908, 1040, 1077
FriOI GRGCYC 4 cut(s) 75, 204, 669, 1069
Fsp4HI GCNGC 7 cut(s) 24, 37, 300, 681, 806, 929, 1178
FspBI CTAG 8 cut(s) 467, 512, 662, 677, 797, 878, 1226, 1475
GluI GCNGC 7 cut(s) 24, 37, 300, 681, 806, 929, 1178
HapII CCGG 2 cut(s) 574, 925
HgaI GACGC 2 cut(s) 173, 569
Hin1II CATG 8 cut(s) 23, 316, 346, 435, 604, 1260, 1430, 1438
HincII GTYRAC 4 cut(s) 232, 496, 559, 902
HindII GTYRAC 4 cut(s) 232, 496, 559, 902
HindIII AAGCTT 1 cut(s) 1374
HinfI GANTC 8 cut(s) 84, 371, 400, 618, 815, 898, 973, 1351
HpaII CCGG 2 cut(s) 574, 925
HphI GGTGA 5 cut(s) 82, 201, 641, 791, 1141
Hpy166II GTNNAC 8 cut(s) 232, 355, 415, 496, 530, 559, 902, 1419
Hpy188I TCNGA 2 cut(s) 839, 1103
Hpy188III TCNNGA 2 cut(s) 76, 188
Hpy8I GTNNAC 8 cut(s) 232, 355, 415, 496, 530, 559, 902, 1419
Hpy99I CGWCG 5 cut(s) 167, 251, 336, 596, 953
HpyAV CCTTC 4 cut(s) 184, 844, 1316, 1476
HpyCH4III ACNGT 2 cut(s) 109, 588
HpyCH4IV ACGT 5 cut(s) 181, 828, 1117, 1208, 1266
HpyCH4V TGCA 7 cut(s) 23, 36, 133, 1331, 1370, 1444, 1451
HpyF10VI GCNNNNNNNGC 4 cut(s) 296, 428, 802, 1457
HpyF3I CTNAG 3 cut(s) 686, 1188, 1413
HpySE526I ACGT 5 cut(s) 181, 828, 1117, 1208, 1266
Hsp92II CATG 8 cut(s) 23, 316, 346, 435, 604, 1260, 1430, 1438
Ksp22I TGATCA 1 cut(s) 315
Kzo9I GATC 6 cut(s) 6, 284, 315, 505, 1167, 1462
LmnI GCTCC 3 cut(s) 207, 1072, 1222
Lsp1109I GCAGC 4 cut(s) 35, 48, 692, 817
LweI GCATC 4 cut(s) 176, 229, 261, 1155
MaeI CTAG 8 cut(s) 467, 512, 662, 677, 797, 878, 1226, 1475
MaeII ACGT 5 cut(s) 181, 828, 1117, 1208, 1266
MaeIII GTNAC 3 cut(s) 88, 109, 250
MalI GATC 6 cut(s) 8, 286, 317, 507, 1169, 1464
MbiI CCGCTC 1 cut(s) 1180
MboI GATC 6 cut(s) 6, 284, 315, 505, 1167, 1462
MboII GAAGA 7 cut(s) 109, 515, 624, 756, 1273, 1292, 1461
MfeI CAATTG 1 cut(s) 735
MflI RGATCY 1 cut(s) 505
MhlI GDGCHC 5 cut(s) 75, 204, 600, 669, 1069
MluCI AATT 9 cut(s) 488, 516, 533, 636, 698, 735, 1305, 1358, 1445
MlyI GAGTC 3 cut(s) 78, 809, 907
MmeI TCCRAC 3 cut(s) 450, 485, 1081
MseI TTAA 1 cut(s) 1356
MslI CAYNNNNRTG 2 cut(s) 605, 1439
MspI CCGG 2 cut(s) 574, 925
MspR9I CCNGG 2 cut(s) 42, 522
MunI CAATTG 1 cut(s) 735
Mva1269I GAATGC 1 cut(s) 1207
MvaI CCWGG 2 cut(s) 42, 522
MwoI GCNNNNNNNGC 4 cut(s) 296, 428, 802, 1457
NcoI CCATGG 1 cut(s) 1256
NdeI CATATG 1 cut(s) 650
NdeII GATC 6 cut(s) 6, 284, 315, 505, 1167, 1462
NheI GCTAGC 1 cut(s) 877
NlaIII CATG 8 cut(s) 23, 316, 346, 435, 604, 1260, 1430, 1438
NlaIV GGNNCC 4 cut(s) 367, 437, 850, 1068
NmeAIII GCCGAG 1 cut(s) 412
NmuCI GTSAC 3 cut(s) 88, 109, 250
NspI RCATGY 4 cut(s) 23, 604, 1430, 1438
PaeI GCATGC 1 cut(s) 23
PciI ACATGT 1 cut(s) 1434
PctI GAATGC 1 cut(s) 1207
PfeI GAWTC 5 cut(s) 371, 400, 618, 973, 1351
PflMI CCANNNNNTGG 1 cut(s) 432
PfoI TCCNGGA 1 cut(s) 520
PkrI GCNGC 7 cut(s) 25, 38, 301, 682, 807, 930, 1179
PleI GAGTC 3 cut(s) 78, 809, 906
PpsI GAGTC 3 cut(s) 78, 809, 906
Ppu21I YACGTR 2 cut(s) 182, 829
PscI ACATGT 1 cut(s) 1434
Psp124BI GAGCTC 2 cut(s) 75, 204
Psp6I CCWGG 2 cut(s) 40, 520
PspGI CCWGG 2 cut(s) 40, 520
PspN4I GGNNCC 4 cut(s) 367, 437, 850, 1068
PspPI GGNCC 9 cut(s) 49, 355, 571, 706, 740, 753, 849, 1027, 1087
PstI CTGCAG 1 cut(s) 38
PsuI RGATCY 1 cut(s) 505
RsaI GTAC 4 cut(s) 282, 416, 590, 1161
RsaNI GTAC 4 cut(s) 281, 415, 589, 1160
RseI CAYNNNNRTG 2 cut(s) 605, 1439
SacI GAGCTC 2 cut(s) 75, 204
SalI GTCGAC 1 cut(s) 230
SaqAI TTAA 1 cut(s) 1356
SatI GCNGC 7 cut(s) 24, 37, 300, 681, 806, 929, 1178
Sau3AI GATC 6 cut(s) 6, 284, 315, 505, 1167, 1462
Sau96I GGNCC 9 cut(s) 49, 355, 571, 706, 740, 753, 849, 1027, 1087
SchI GAGTC 3 cut(s) 78, 809, 907
ScrFI CCNGG 2 cut(s) 42, 522
SduI GDGCHC 5 cut(s) 75, 204, 600, 669, 1069
SfaNI GCATC 4 cut(s) 176, 229, 261, 1155
SfcI CTRYAG 1 cut(s) 34
SinI GGWCC 2 cut(s) 355, 571
SmiMI CAYNNNNRTG 2 cut(s) 605, 1439
SmlI CTYRAG 2 cut(s) 68, 772
SmoI CTYRAG 2 cut(s) 68, 772
SphI GCATGC 1 cut(s) 23
Sse9I AATT 9 cut(s) 488, 516, 533, 636, 698, 735, 1305, 1358, 1445
SsiI CCGC 5 cut(s) 300, 843, 929, 1122, 1178
SspI AATATT 1 cut(s) 957
SspMI CTAG 8 cut(s) 467, 512, 662, 677, 797, 878, 1226, 1475
SstI GAGCTC 2 cut(s) 75, 204
StyD4I CCNGG 2 cut(s) 40, 520
StyI CCWWGG 4 cut(s) 141, 1014, 1035, 1256
TaaI ACNGT 2 cut(s) 109, 588
TaiI ACGT 5 cut(s) 184, 831, 1120, 1211, 1269
TaqI TCGA 5 cut(s) 162, 198, 231, 501, 873
TaqII GACCGA 1 cut(s) 1230
TasI AATT 9 cut(s) 488, 516, 533, 636, 698, 735, 1305, 1358, 1445
TatI WGTACW 1 cut(s) 414
TauI GCSGC 3 cut(s) 302, 931, 1180
TfiI GAWTC 5 cut(s) 371, 400, 618, 973, 1351
Tru1I TTAA 1 cut(s) 1356
Tru9I TTAA 1 cut(s) 1356
TscAI CASTG 2 cut(s) 112, 1369
TseFI GTSAC 3 cut(s) 88, 109, 250
TseI GCWGC 4 cut(s) 23, 36, 680, 805
Tsp45I GTSAC 3 cut(s) 88, 109, 250
TspDTI ATGAA 2 cut(s) 168, 876
TspGWI ACGGA 3 cut(s) 1170, 1232, 1470
TspRI CASTG 2 cut(s) 112, 1369
Van91I CCANNNNNTGG 1 cut(s) 432
VpaK11BI GGWCC 2 cut(s) 355, 571
XapI RAATTY 5 cut(s) 488, 516, 636, 698, 1358
XceI RCATGY 4 cut(s) 23, 604, 1430, 1438
XcmI CCANNNNNNNNNTGG 3 cut(s) 349, 1021, 1170
XmiI GTMKAC 2 cut(s) 231, 529
XspI CTAG 8 cut(s) 467, 512, 662, 677, 797, 878, 1226, 1475
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.