Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0000936

Physical Location & Seq

Genomic Coordinates Reverse (-)

10749340 .. 10756941

Gene Structure 7602 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g17020.t6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2226 bp

ATGGATATAACAGAGGTGACACTGATGCACCATATGGGGATTGTGTTGGGTGTGCTTTGGTTGCTCTCTTACTACAATTGCTGCCATGCAATTGCCTACTTTCTCTCTCTGATTTATCTCTTTGCGGTTCATGAGCGGTATGTTATGCGACTGCGGAAGAAGCTACAGTTTGAAGAAACCAGGCAGGGCAATCAGAGAAGGGTACTTTCTGATTCTGAAACAGTGCGGTGGCTGAACCATGCAGTTGAAAAGATATGGCCTATATGTATGGAACAGATTGCTTCCCAGAGAGTTCTCCTCCCAATCATACCTTGGTTTTTGGAGAAGTACAAACCATGGACTGTTAGTAAAGGTGTAGTACAGCACCTTTATTTGGGAAGGAACCCACCTATGTTCACAGAGATGAGAGTTCTTCGCCAGTCTACTGGTGATGACCATTTGGTTCTGGAGTTGGGAATGAATTTTCTGACAGCTGATGATATGCTTGGAATACTTGCTGTCAAGCTAAAGAAAAGGCTGGGCTTTGGAATTTGGGCGAAGTTGCATATTACCGGCATGCATGTTGAAGGCAAGGTCATGATTGGAGTGAAGTTCCTTCGCAAGTGGCCTTTTCTTGGCCGTGTGCGGTTATGCTTCGTCGAGCCTCCATATTTTCAAATGACCGTCAAGCCTATTTTTACTCGTGGGCTTGATGTTACAGAAGTCCCAGGGATTGATGGATGGCTGGATAAGCTTCTCTCAATTGCCTTCGAGCAGACACTTGTTCAGGTATTTGGTAAGCTTGTCTACATTGCCTTGAAGAAGACACTTATTCAGCCTAATATGCTAGTTGTTGACATGGAGAAATTCACCACACCAGAAGAGGAAAATTGGTTCTCTGTGGATGAGAAGGAGCCTGTTGCGCATCTCAAAGTAGAAGTTATTGAAGCATCCGACATGAAAGTCTCCGACTTAAATGGGTTTGCTGATCCTTATGTGAAGGGCCAATTCGGTGTTTATCAATTCAAAACTAAGATACAAAAGAAGACACTGACCCCAAAATGGTTTGAGGAATTTAAGATCCCGATTATTACTTGGGATTCACCTAATGTGCTAGCTATTGAAGTTCATGACAAAGATATTTTTGTTGATGATACCCTGGGGAACTGTTCCATTAACATTGGTGAACTTAGGGATGGTGTGAGACATGACATGTGGTTGCCTCTTCAGAACATCAAAACAGCAGGGAGGCTGCATCTTGCAGTAACTGTGCTCGAAGTCAGTGGGGAGGGCAGTGATCCCCCAAATGTTCGGGAATCGGAAATGCCAAATATGGAAGATAAAAGAAATTCCTTTTCCAGTGAGACTGCTAATAAAAATTCCTTCTCGTCTTTATCATCAGAGAAATCTCCTAGGGTGGCCGATAATTATGAGCCCATTGATGTTGAAGGACAAAAAGAAACTGGTATATGGGTCCATCACCCAGGAAGTGAAGTTTCACAAACTTGGGAGGCTAGAAAAGGAAAGGGTCGACGTCTTAGTACCCAAATTCAAGGGGAGCCTAATGGGAGCAGCGGCACTGATGATACTCAAGATGATAAACATCCAATGCAATCAGTTCGCCGTGGTCTACGTAAACTTGGTTCAGTATTCCAGAAGAATCCCAAAAAGGAGGATAATTCAAGCAGCTTTACAGAGTCACTCCAAAGCCCAGTTACTCCACGTGTCAATCTAAGGGCGGTTAATGAAAAGGACATTGCGGTAAAATTTGTTGTCGAAGATGAAATTTCTGGTAAAGTTTCAAGTTCTGGAGAGAGTAGCTCAGGTAGCCCAGGAAAGGGCAGGGTGAAAGGCATGGCAAAGAGTTTCTTCAAACATGCTGAAAAATCAGTGAAGCATGCACTTTCACGTAAAGGTTCAAGAAAGTCACAGACTGGTTCTTGTGAGAGGGAAATCATAGCAGATTCCAACTCTTCTGATGATGATGATACTCCTCCCTCCCCAATAGTTGAATTGATACCAGTTGTCTCCAGGGATATACCTCATCCCCCTGTTAATGATTCGTTCACGTCAGATGAGAATTTGGTTCAGCCGCTTGCAAGTGCTCTAAGTAACATTCCAGAGGATACTGAGGACGAGGTGAAGAAGGTTGAACATAAAGACACAGAAAACATGCTTGAGAAGCCGGACGACCCTGAAAAAAGTGACAAGGGATTGTCTGAGCCATTAAAAGTTGAAGCTAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0005886 GO:0012505 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00290 ko00650 ko00660 ko00770 ko01100 ko01110 ko01130 ko01210 ko01230 map00290 map00650 map00660 map00770 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

C2 SMP_LBD

Protein Analysis

742

Amino Acids

83.76

Weight (kDa)

6.18

Isoelectric Point (pI)

37.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SMP_MUG190-like	PF25669	68 - 160	2.4e-09	MUG190-like SMP domain
C2	PF00168	179 - 279	1.5e-19	C2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000936)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53590 AT3G14590 AT3G14590 AT3G14590 AT3G14590 AT3G14590
fragaria_vesca	FvH4_3g16980 FvH4_3g16980 FvH4_3g16980 FvH4_3g16980 FvH4_3g16980 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020
malus_domestica	MD00G1185500.v1.1 MD00G1185600.v1.1 MD03G1254200.v1.1 MD03G1254900.v1.1 MD11G1275800.v1.1 MD11G1276000.v1.1
prunus_persica	Prupe.4G152200_v2.0.a1 Prupe.4G152200_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1
pyrus_communis	pycom03g20170 pycom03g20190 pycom11g24400
rosa_chinensis	RchiOBHm_Chr2g0135571 RchiOBHm_Chr2g0159501 RchiOBHm_Chr2g0159511 RchiOBHm_Chr5g0028301 RchiOBHm_Chr5g0028351 RchiOBHm_Chr5g0039631
rosa_laevigata	RLG00000033080 RLG00000033088
rosa_multiflora	Rmu_sc0001020.1_g000001 Rmu_sc0002481.1_g000040 Rmu_sc0008526.1_g000010
rosa_roxburghii	Rroxscaffold_1G00051350 Rroxscaffold_1G00051420 Rroxscaffold_1G00051430
rosa_rugosa	Rorug05G0105600
rosa_samantha	Rh1AG292900 Rh4AG059100 Rh5AG199100 Rh5AG199600 Rh5BG197700 Rh5BG198100 Rh5CG217400 Rh5CG218100 Rh5DG199400 Rh5DG200000 Rh7DG370100
rosa_wichuraiana	Rw4G016870 Rw5G018160 Rw5G018190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	941
AatII	GACGTC	1 cut(s)	1516
Acc16I	TGCGCA	1 cut(s)	903
AccBSI	CCGCTC	1 cut(s)	136
AccI	GTMKAC	4 cut(s)	422, 786, 1510, 1609
AciI	CCGC	9 cut(s)	125, 136, 154, 226, 625, 1554, 1718, 1739, 2072
AclWI	GGATC	3 cut(s)	962, 1054, 1271
AcoI	YGGCCR	2 cut(s)	616, 1398
AcuI	CTGAAG	1 cut(s)	1190
AcvI	CACGTG	1 cut(s)	1703
AcyI	GRCGYC	1 cut(s)	1513
AfaI	GTAC	4 cut(s)	204, 329, 360, 1522
AfiI	CCNNNNNNNGG	5 cut(s)	373, 614, 1041, 1816, 1817
AflIII	ACRYGT	2 cut(s)	1191, 1702
AjiI	CACGTC	1 cut(s)	2049
AjnI	CCWGG	6 cut(s)	179, 706, 1137, 1462, 1810, 2009
AloI	GAACNNNNNNTCC	2 cut(s)	857, 889
AluBI	AGCT	9 cut(s)	163, 473, 505, 733, 781, 1097, 1668, 1800, 2219
AluI	AGCT	9 cut(s)	163, 473, 505, 733, 781, 1097, 1668, 1800, 2219
Alw21I	GWGCWC	2 cut(s)	1254, 2086
Alw26I	GTCTC	4 cut(s)	949, 1177, 1337, 2011
AlwI	GGATC	3 cut(s)	962, 1054, 1271
AlwNI	CAGNNNCTG	1 cut(s)	1247
AoxI	GGCC	5 cut(s)	257, 605, 616, 982, 1398
ApeKI	GCWGC	4 cut(s)	81, 1231, 1551, 1665
AspA2I	CCTAGG	1 cut(s)	1391
AspLEI	GCGC	1 cut(s)	904
AspS9I	GGNCC	2 cut(s)	982, 1453
AsuHPI	GGTGA	8 cut(s)	28, 440, 841, 1074, 1175, 1451, 1837, 2131
AsuNHI	GCTAGC	1 cut(s)	1093
AvaII	GGWCC	1 cut(s)	1453
AvrII	CCTAGG	1 cut(s)	1391
BanII	GRGCYC	1 cut(s)	1416
BauI	CACGAG	1 cut(s)	681
BbrPI	CACGTG	1 cut(s)	1703
BbsI	GAAGAC	2 cut(s)	809, 1031
Bbv12I	GWGCWC	2 cut(s)	1254, 2086
BbvI	GCAGC	4 cut(s)	68, 1218, 1563, 1677
BccI	CCATC	4 cut(s)	710, 714, 1169, 1464
BceAI	ACGGC	2 cut(s)	603, 1587
BcgI	CGANNNNNNTGC	2 cut(s)	1580, 1614
BciT130I	CCWGG	6 cut(s)	181, 708, 1139, 1464, 1812, 2011
BciVI	GTATCC	1 cut(s)	2098
BcoDI	GTCTC	4 cut(s)	949, 1177, 1337, 2011
BfaI	CTAG	5 cut(s)	827, 1094, 1392, 1494, 2220
BfmI	CTRYAG	1 cut(s)	164
BfuI	GTATCC	1 cut(s)	2098
BisI	GCNGC	6 cut(s)	82, 1232, 1552, 1555, 1666, 2072
BlnI	CCTAGG	1 cut(s)	1391
BlsI	GCNGC	6 cut(s)	83, 1233, 1553, 1556, 1667, 2073
Bme1390I	CCNGG	6 cut(s)	181, 708, 1139, 1464, 1812, 2011
Bme18I	GGWCC	1 cut(s)	1453
BmgBI	CACGTC	1 cut(s)	2049
BmgT120I	GGNCC	2 cut(s)	982, 1453
BmiI	GGNNCC	4 cut(s)	383, 894, 1454, 1539
BmrFI	CCNGG	6 cut(s)	181, 708, 1139, 1464, 1812, 2011
BmrI	ACTGGG	1 cut(s)	1685
BmsI	GCATC	4 cut(s)	15, 913, 938, 1243
BmtI	GCTAGC	1 cut(s)	1097
BmuI	ACTGGG	1 cut(s)	1685
BpiI	GAAGAC	2 cut(s)	809, 1031
BplI	GAGNNNNNCTC	4 cut(s)	282, 314, 1784, 1816
BpmI	CTGGAG	3 cut(s)	467, 1809, 1993
Bpu10I	CCTNAGC	1 cut(s)	1801
BpuEI	CTTGAG	2 cut(s)	1554, 2177
BsaAI	YACGTR	3 cut(s)	1613, 1703, 1889
BsaBI	GATNNNNATC	1 cut(s)	1581
BsaHI	GRCGYC	1 cut(s)	1513
Bsc4I	CCNNNNNNNGG	5 cut(s)	373, 614, 1041, 1816, 1817
Bse118I	RCCGGY	1 cut(s)	551
Bse1I	ACTGG	7 cut(s)	418, 430, 1338, 1447, 1691, 1918, 2000
Bse3DI	GCAATG	2 cut(s)	789, 1734
Bse8I	GATNNNNATC	1 cut(s)	1581
BseBI	CCWGG	6 cut(s)	181, 708, 1139, 1464, 1812, 2011
BseGI	GGATG	6 cut(s)	725, 889, 929, 1180, 1582, 2023
BseJI	GATNNNNATC	1 cut(s)	1581
BseLI	CCNNNNNNNGG	5 cut(s)	373, 614, 1041, 1816, 1817
BseMI	GCAATG	2 cut(s)	789, 1734
BseMII	CTCAG	3 cut(s)	1815, 2100, 2190
BseNI	ACTGG	7 cut(s)	418, 430, 1338, 1447, 1691, 1918, 2000
BseRI	GAGGAG	2 cut(s)	287, 1962
BseXI	GCAGC	4 cut(s)	68, 1218, 1563, 1677
BseYI	CCCAGC	1 cut(s)	517
BshFI	GGCC	5 cut(s)	259, 607, 618, 984, 1400
BsiHKAI	GWGCWC	2 cut(s)	1254, 2086
BsiSI	CCGG	2 cut(s)	552, 2165
BslFI	GGGAC	1 cut(s)	689
BslI	CCNNNNNNNGG	5 cut(s)	373, 614, 1041, 1816, 1817
BsmAI	GTCTC	4 cut(s)	949, 1177, 1337, 2011
BsmFI	GGGAC	1 cut(s)	689
BsnI	GGCC	5 cut(s)	259, 607, 618, 984, 1400
Bsp1286I	GDGCHC	3 cut(s)	1254, 1416, 2086
Bsp143I	GATC	3 cut(s)	967, 1059, 1276
Bsp19I	CCATGG	1 cut(s)	335
BspACI	CCGC	9 cut(s)	125, 136, 154, 226, 625, 1554, 1718, 1739, 2072
BspANI	GGCC	5 cut(s)	259, 607, 618, 984, 1400
BspCNI	CTCAG	3 cut(s)	1814, 2101, 2191
BspHI	TCATGA	3 cut(s)	130, 576, 1108
BspLI	GGNNCC	4 cut(s)	383, 894, 1454, 1539
BspOI	GCTAGC	1 cut(s)	1097
BspPI	GGATC	3 cut(s)	962, 1054, 1271
BsrBI	CCGCTC	1 cut(s)	136
BsrDI	GCAATG	2 cut(s)	789, 1734
BsrFI	RCCGGY	1 cut(s)	551
BsrI	ACTGG	7 cut(s)	418, 430, 1338, 1447, 1691, 1918, 2000
BssAI	RCCGGY	1 cut(s)	551
BssMI	GATC	3 cut(s)	967, 1059, 1276
BssNI	GRCGYC	1 cut(s)	1513
BssSI	CACGAG	1 cut(s)	681
BssT1I	CCWWGG	3 cut(s)	311, 335, 1391
Bst2BI	CACGAG	1 cut(s)	681
Bst2UI	CCWGG	6 cut(s)	181, 708, 1139, 1464, 1812, 2011
Bst4CI	ACNGT	6 cut(s)	168, 223, 343, 664, 1148, 1249
Bst6I	CTCTTC	3 cut(s)	855, 1209, 1957
BstACI	GRCGYC	1 cut(s)	1513
BstBAI	YACGTR	3 cut(s)	1613, 1703, 1889
BstC8I	GCNNGC	4 cut(s)	557, 1095, 1878, 2076
BstDEI	CTNAG	8 cut(s)	1011, 1169, 1517, 1712, 1801, 2087, 2109, 2199
BstDSI	CCRYGG	2 cut(s)	335, 1603
BstF5I	GGATG	6 cut(s)	725, 889, 929, 1180, 1582, 2023
BstHHI	GCGC	1 cut(s)	904
BstKTI	GATC	3 cut(s)	970, 1062, 1279
BstMAI	GTCTC	4 cut(s)	949, 1177, 1337, 2011
BstMBI	GATC	3 cut(s)	967, 1059, 1276
BstMWI	GCNNNNNNNGC	7 cut(s)	61, 160, 730, 823, 901, 1806, 2161
BstNI	CCWGG	6 cut(s)	181, 708, 1139, 1464, 1812, 2011
BstNSI	RCATGY	6 cut(s)	559, 563, 1195, 1859, 1880, 2155
BstSCI	CCNGG	6 cut(s)	179, 706, 1137, 1462, 1810, 2009
BstSFI	CTRYAG	1 cut(s)	164
BstSNI	TACGTA	1 cut(s)	1613
BstV1I	GCAGC	4 cut(s)	68, 1218, 1563, 1677
BstV2I	GAAGAC	2 cut(s)	809, 1031
BstX2I	RGATCY	1 cut(s)	1059
BstXI	CCANNNNNNTGG	1 cut(s)	425
BstYI	RGATCY	1 cut(s)	1059
BsuI	GTATCC	1 cut(s)	2098
BsuRI	GGCC	5 cut(s)	259, 607, 618, 984, 1400
BtgI	CCRYGG	2 cut(s)	335, 1603
BtrI	CACGTC	1 cut(s)	2049
BtsCI	GGATG	6 cut(s)	725, 889, 929, 1180, 1582, 2023
BtsI	GCAGTG	1 cut(s)	1279
BtsIMutI	CAGTG	8 cut(s)	20, 228, 1028, 1267, 1279, 1345, 1557, 1875
Cac8I	GCNNGC	4 cut(s)	557, 1095, 1878, 2076
CaiI	CAGNNNCTG	1 cut(s)	1247
CciI	TCATGA	3 cut(s)	130, 576, 1108
CfoI	GCGC	1 cut(s)	904
Cfr10I	RCCGGY	1 cut(s)	551
Cfr13I	GGNCC	2 cut(s)	982, 1453
Csp6I	GTAC	4 cut(s)	203, 328, 359, 1521
CviQI	GTAC	4 cut(s)	203, 328, 359, 1521
DdeI	CTNAG	8 cut(s)	1011, 1169, 1517, 1712, 1801, 2087, 2109, 2199
DpnI	GATC	3 cut(s)	969, 1061, 1278
DpnII	GATC	3 cut(s)	967, 1059, 1276
DrdI	GACNNNNNNGTC	1 cut(s)	941
DseDI	GACNNNNNNGTC	1 cut(s)	941
EaeI	YGGCCR	2 cut(s)	616, 1398
Eam1104I	CTCTTC	3 cut(s)	855, 1209, 1957
EarI	CTCTTC	3 cut(s)	855, 1209, 1957
Eco105I	TACGTA	1 cut(s)	1613
Eco130I	CCWWGG	3 cut(s)	311, 335, 1391
Eco24I	GRGCYC	1 cut(s)	1416
Eco47I	GGWCC	1 cut(s)	1453
Eco57I	CTGAAG	1 cut(s)	1190
Eco72I	CACGTG	1 cut(s)	1703
EcoRII	CCWGG	6 cut(s)	179, 706, 1137, 1462, 1810, 2009
EcoT14I	CCWWGG	3 cut(s)	311, 335, 1391
EcoT22I	ATGCAT	1 cut(s)	561
EcoT38I	GRGCYC	1 cut(s)	1416
ErhI	CCWWGG	3 cut(s)	311, 335, 1391
FalI	AAGNNNNNCTT	2 cut(s)	1832, 1864
FaqI	GGGAC	1 cut(s)	689
FauNDI	CATATG	1 cut(s)	33
FblI	GTMKAC	4 cut(s)	422, 786, 1510, 1609
Fnu4HI	GCNGC	6 cut(s)	82, 1232, 1552, 1555, 1666, 2072
FokI	GGATG	6 cut(s)	732, 896, 916, 1187, 1569, 2010
FriOI	GRGCYC	1 cut(s)	1416
Fsp4HI	GCNGC	6 cut(s)	82, 1232, 1552, 1555, 1666, 2072
FspBI	CTAG	5 cut(s)	827, 1094, 1392, 1494, 2220
FspI	TGCGCA	1 cut(s)	903
GlaI	GCGC	1 cut(s)	903
GluI	GCNGC	6 cut(s)	82, 1232, 1552, 1555, 1666, 2072
GsaI	CCCAGC	1 cut(s)	521
GsuI	CTGGAG	3 cut(s)	467, 1809, 1993
HaeIII	GGCC	5 cut(s)	259, 607, 618, 984, 1400
HapII	CCGG	2 cut(s)	552, 2165
HhaI	GCGC	1 cut(s)	904
Hin1I	GRCGYC	1 cut(s)	1513
Hin6I	GCGC	1 cut(s)	902
HinP1I	GCGC	1 cut(s)	902
HincII	GTYRAC	2 cut(s)	835, 1511
HindII	GTYRAC	2 cut(s)	835, 1511
HindIII	AAGCTT	2 cut(s)	731, 779
HinfI	GANTC	7 cut(s)	212, 1079, 1295, 1639, 1676, 1943, 2039
HpaII	CCGG	2 cut(s)	552, 2165
HphI	GGTGA	8 cut(s)	28, 440, 841, 1074, 1175, 1451, 1837, 2131
Hpy166II	GTNNAC	9 cut(s)	396, 423, 787, 835, 1166, 1511, 1610, 1616, 2046
Hpy8I	GTNNAC	9 cut(s)	396, 423, 787, 835, 1166, 1511, 1610, 1616, 2046
Hpy99I	CGWCG	2 cut(s)	641, 1515
HpyCH4III	ACNGT	6 cut(s)	168, 223, 343, 664, 1148, 1249
HpyCH4IV	ACGT	5 cut(s)	1513, 1612, 1702, 1888, 2048
HpyF10VI	GCNNNNNNNGC	7 cut(s)	61, 160, 730, 823, 901, 1806, 2161
HpyF3I	CTNAG	8 cut(s)	1011, 1169, 1517, 1712, 1801, 2087, 2109, 2199
HpySE526I	ACGT	5 cut(s)	1513, 1612, 1702, 1888, 2048
Hsp92I	GRCGYC	1 cut(s)	1513
HspAI	GCGC	1 cut(s)	902
Kzo9I	GATC	3 cut(s)	967, 1059, 1276
LmnI	GCTCC	3 cut(s)	892, 1537, 1548
Lsp1109I	GCAGC	4 cut(s)	68, 1218, 1563, 1677
LweI	GCATC	4 cut(s)	15, 913, 938, 1243
MaeI	CTAG	5 cut(s)	827, 1094, 1392, 1494, 2220
MaeII	ACGT	5 cut(s)	1513, 1612, 1702, 1888, 2048
MaeIII	GTNAC	8 cut(s)	16, 694, 1243, 1677, 1693, 1905, 2090, 2183
MalI	GATC	3 cut(s)	969, 1061, 1278
MbiI	CCGCTC	1 cut(s)	136
MboI	GATC	3 cut(s)	967, 1059, 1276
MfeI	CAATTG	3 cut(s)	76, 90, 741
MflI	RGATCY	1 cut(s)	1059
MhlI	GDGCHC	3 cut(s)	1254, 1416, 2086
MlyI	GAGTC	1 cut(s)	1685
MmeI	TCCRAC	3 cut(s)	957, 972, 1971
Mph1103I	ATGCAT	1 cut(s)	561
MseI	TTAA	6 cut(s)	953, 1056, 1155, 1722, 2034, 2207
MslI	CAYNNNNRTG	1 cut(s)	401
MspA1I	CMGCKG	2 cut(s)	473, 1554
MspI	CCGG	2 cut(s)	552, 2165
MspR9I	CCNGG	6 cut(s)	181, 708, 1139, 1464, 1812, 2011
MunI	CAATTG	3 cut(s)	76, 90, 741
MvaI	CCWGG	6 cut(s)	181, 708, 1139, 1464, 1812, 2011
MwoI	GCNNNNNNNGC	7 cut(s)	61, 160, 730, 823, 901, 1806, 2161
NcoI	CCATGG	1 cut(s)	335
NdeI	CATATG	1 cut(s)	33
NdeII	GATC	3 cut(s)	967, 1059, 1276
NheI	GCTAGC	1 cut(s)	1093
NlaIV	GGNNCC	4 cut(s)	383, 894, 1454, 1539
NmuCI	GTSAC	4 cut(s)	16, 1677, 1905, 2183
NsbI	TGCGCA	1 cut(s)	903
NsiI	ATGCAT	1 cut(s)	561
NspI	RCATGY	6 cut(s)	559, 563, 1195, 1859, 1880, 2155
PaeI	GCATGC	2 cut(s)	559, 1880
PagI	TCATGA	3 cut(s)	130, 576, 1108
PasI	CCCWGGG	2 cut(s)	707, 1138
PciI	ACATGT	1 cut(s)	1191
PfeI	GAWTC	6 cut(s)	212, 1079, 1295, 1639, 1943, 2039
PkrI	GCNGC	6 cut(s)	83, 1233, 1553, 1556, 1667, 2073
PleI	GAGTC	1 cut(s)	1684
PmaCI	CACGTG	1 cut(s)	1703
PmlI	CACGTG	1 cut(s)	1703
PpsI	GAGTC	1 cut(s)	1684
Ppu21I	YACGTR	3 cut(s)	1613, 1703, 1889
PscI	ACATGT	1 cut(s)	1191
Psp6I	CCWGG	6 cut(s)	179, 706, 1137, 1462, 1810, 2009
PspCI	CACGTG	1 cut(s)	1703
PspFI	CCCAGC	1 cut(s)	517
PspGI	CCWGG	6 cut(s)	179, 706, 1137, 1462, 1810, 2009
PspN4I	GGNNCC	4 cut(s)	383, 894, 1454, 1539
PspPI	GGNCC	2 cut(s)	982, 1453
PsrI	GAACNNNNNNTAC	2 cut(s)	1606, 1638
PstNI	CAGNNNCTG	1 cut(s)	1247
PsuI	RGATCY	1 cut(s)	1059
PvuII	CAGCTG	1 cut(s)	473
RsaI	GTAC	4 cut(s)	204, 329, 360, 1522
RsaNI	GTAC	4 cut(s)	203, 328, 359, 1521
RseI	CAYNNNNRTG	1 cut(s)	401
SalI	GTCGAC	1 cut(s)	1509
SaqAI	TTAA	6 cut(s)	953, 1056, 1155, 1722, 2034, 2207
SatI	GCNGC	6 cut(s)	82, 1232, 1552, 1555, 1666, 2072
Sau3AI	GATC	3 cut(s)	967, 1059, 1276
Sau96I	GGNCC	2 cut(s)	982, 1453
SchI	GAGTC	1 cut(s)	1685
ScrFI	CCNGG	6 cut(s)	181, 708, 1139, 1464, 1812, 2011
SduI	GDGCHC	3 cut(s)	1254, 1416, 2086
SfaNI	GCATC	4 cut(s)	15, 913, 938, 1243
SfcI	CTRYAG	1 cut(s)	164
SinI	GGWCC	1 cut(s)	1453
SmiMI	CAYNNNNRTG	1 cut(s)	401
SmlI	CTYRAG	2 cut(s)	1569, 2156
SmoI	CTYRAG	2 cut(s)	1569, 2156
SnaBI	TACGTA	1 cut(s)	1613
SphI	GCATGC	2 cut(s)	559, 1880
SsiI	CCGC	9 cut(s)	125, 136, 154, 226, 625, 1554, 1718, 1739, 2072
SspMI	CTAG	5 cut(s)	827, 1094, 1392, 1494, 2220
StyD4I	CCNGG	6 cut(s)	179, 706, 1137, 1462, 1810, 2009
StyI	CCWWGG	3 cut(s)	311, 335, 1391
TaaI	ACNGT	6 cut(s)	168, 223, 343, 664, 1148, 1249
TaiI	ACGT	5 cut(s)	1516, 1615, 1705, 1891, 2051
TaqI	TCGA	5 cut(s)	639, 750, 1254, 1510, 1755
TatI	WGTACW	2 cut(s)	327, 358
TauI	GCSGC	2 cut(s)	1557, 2074
TfiI	GAWTC	6 cut(s)	212, 1079, 1295, 1639, 1943, 2039
Tru1I	TTAA	6 cut(s)	953, 1056, 1155, 1722, 2034, 2207
Tru9I	TTAA	6 cut(s)	953, 1056, 1155, 1722, 2034, 2207
TscAI	CASTG	8 cut(s)	27, 228, 1035, 1267, 1279, 1345, 1564, 1875
TseFI	GTSAC	4 cut(s)	16, 1677, 1905, 2183
TseI	GCWGC	4 cut(s)	81, 1231, 1551, 1665
Tsp45I	GTSAC	4 cut(s)	16, 1677, 1905, 2183
TspDTI	ATGAA	6 cut(s)	119, 473, 953, 1097, 1740, 1776
TspRI	CASTG	8 cut(s)	27, 228, 1035, 1267, 1279, 1345, 1564, 1875
VpaK11BI	GGWCC	1 cut(s)	1453
XceI	RCATGY	6 cut(s)	559, 563, 1195, 1859, 1880, 2155
XcmI	CCANNNNNNNNNTGG	1 cut(s)	309
XmaJI	CCTAGG	1 cut(s)	1391
XmiI	GTMKAC	4 cut(s)	422, 786, 1510, 1609
XspI	CTAG	5 cut(s)	827, 1094, 1392, 1494, 2220
ZraI	GACGTC	1 cut(s)	1514
Zsp2I	ATGCAT	1 cut(s)	561

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.