Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0000936

Physical Location & Seq

Genomic Coordinates Reverse (-)

22180025 .. 22186032

Gene Structure 6008 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG199400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1983 bp

ATGGACATTACAGAGGTTTCAATCTTACACCATGTGGGATTTGTGTTATTTGTGCTTTGGTTGCTTGCTCAGCACAATTGCTGCTACCCAGTTGCCTACTTTGTCTCTTTGATTTATCTCTACCTGGTTCATGAGCGCTATGTTATGAGATTGCGAAAGAAACTACAATTCGAGGAAAGGAAACAGTCTAATCAGAGAAGGGTACTTTCTGATTCTGAAACAGTGCGATGGTTGAACCATGCACTTGAAAAGATATGGCCTATATGTATAGAACAGATTGCTTCACAGAAGATTCTCCTCCCTATTATACCTTGGTTTTTGGAGAAGTACAAACCATGGACTGCCAAGGAAGCAGTGGTTCAGCACCTTTACTTAGGAAGAAATGCACCTATGCTCACAGATATTAGAGTTGTTCGCGAGTCTAATGATGATGACCACTTGGTTTTGGAGTTGGGACTGAATTTTCTGACAGCTGATGATATGATTGCAATACTTGCTGTGAAGTTGAGGAAAAGACTGGGTTTCGGGATGTGGGCAAAGTTGCATATTACAGGCATGCATGTTGAGGGGAAGCTGTTGATTGGGGTTAAGTTTCTTCGTAGGTGGCCTTTCCTTGGCCGTTTGCGGATATGCTTCATTGAGCCTCCATATTTTCAGATGACCGTCAAGCCTATTTTTACACATGGCCTTGATGTTACAGTTCTTCCAGGAATTGCTGGGTGGCTGGAAAAGCTTCTTTCCATTGCCTTTGAGCAGACCCTTGTTGAGCCAAATATGCTGGTTGTTGACATGGAGAAATTCGCCTCACCACAGCAAGAGAGTTGGTTCTCTGTGAATGAAAAGGAATCTCTTGGACATGTCAGAGTAGAAGTTATTGAAGCATCTGACATCAAAGCTGCAGATCTAAATGGATTATCTGACCCTTATGTTAAGGGTCAATTGGGCCTTTACCGGTTCAGGACGAAGACACAAAAGAAAACACTGGCTCCAAAATGGCATGAAGAATTCAAGATGCCCATTATTACATGGGATTCATCTACTGTGCTATCTATTGAAGTTCGTGACAAGGACCGATTTGTTGATGATTGCCTTGGATTCTGCTGCATTAACATTGGTGAATATAGAGATGGCCAGAGGCATGACATGTGGTTGCCTCTTCAGAATATTAAAACAGGAAGGATCCATCTTGCAGTAACTGTGGTTGAAGATAATCCCAAGGGGGGTGATAATCCAAATGTTGAGGAAACACCAAATGTGGAAGATGAAAGAAAAAGGTTTGCCAATGACACTAGTAATAAAAGTTCCTTCTCATCTGCATCATCAGAAAAGTTTGACAAAGTGGCAGATAACTTTGAGCCAATTGATGTTGATGGGCAAAGAGAGACTGGAATATGGGTACATCACCCAGGAAGTGAAGTTTCACAAACTTGGGAGAGTAGAAAAGGAAAGAGTCGGCTCCTTGATAATGAGATTCAAAATGATACTGGTGGCCATAGTTCAGTCACCTCTGTCTCCCCAACTAATGAGGACAGTGGCACTGAAAAGAATCACGAGGATAAACACAGGATGAGAGCAGTTCGCAAGGGTCTAAACAGGATCTGCTCGGTATTCCACAAGAATTCCAAAAAGGAGAATGATTCAAGCAGCTTTAGAGAGACTGTTGGATCTGGACATGCTAATATTCAGGAAATTAGTGAAAAAGATATTGCGGTAAGATTTATTGTGGAGGATGATCTTTCCAACCCTCAAGAGGGCAAGGGTTTGAAGGAAGAAGGGGTTGTCACTTCTGGAGGGAGTGGTTCAAAGGGAAAGGGCAAGGGCAAGGGTTTAGACAAGGCAAAGAGTTTCCTTAAACCAGCAAAAAAATCTTCTCGAGATTTTAGGAAGTGTCAAAGTGATTCTTACAAAGGGAGGGAAAGAAAAACATTAGAAGAATTTAACTCTACTGATGAGGATGATGCTCCTCCAAAACGGTTGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0005886 GO:0012505 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00290 ko00650 ko00660 ko00770 ko01100 ko01110 ko01130 ko01210 ko01230 map00290 map00650 map00660 map00770 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

C2 SMP_LBD

Protein Analysis

660

Amino Acids

75.38

Weight (kDa)

7.95

Isoelectric Point (pI)

39.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SMP_MUG190-like	PF25669	189 - 267	1.1e-07	MUG190-like SMP domain
C2	PF00168	285 - 386	2.8e-22	C2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000936)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53590 AT3G14590 AT3G14590 AT3G14590 AT3G14590 AT3G14590
fragaria_vesca	FvH4_3g16980 FvH4_3g16980 FvH4_3g16980 FvH4_3g16980 FvH4_3g16980 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020
malus_domestica	MD00G1185500.v1.1 MD00G1185600.v1.1 MD03G1254200.v1.1 MD03G1254900.v1.1 MD11G1275800.v1.1 MD11G1276000.v1.1
prunus_persica	Prupe.4G152200_v2.0.a1 Prupe.4G152200_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1
pyrus_communis	pycom03g20170 pycom03g20190 pycom11g24400
rosa_chinensis	RchiOBHm_Chr2g0135571 RchiOBHm_Chr2g0159501 RchiOBHm_Chr2g0159511 RchiOBHm_Chr5g0028301 RchiOBHm_Chr5g0028351 RchiOBHm_Chr5g0039631
rosa_laevigata	RLG00000033080 RLG00000033088
rosa_multiflora	Rmu_sc0001020.1_g000001 Rmu_sc0002481.1_g000040 Rmu_sc0008526.1_g000010
rosa_roxburghii	Rroxscaffold_1G00051350 Rroxscaffold_1G00051420 Rroxscaffold_1G00051430
rosa_rugosa	Rorug05G0105600
rosa_samantha	Rh1AG292900 Rh4AG059100 Rh5AG199100 Rh5AG199600 Rh5BG197700 Rh5BG198100 Rh5CG217400 Rh5CG218100 Rh5DG199400 Rh5DG200000 Rh7DG370100
rosa_wichuraiana	Rw4G016870 Rw5G018160 Rw5G018190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	417
AciI	CCGC	2 cut(s)	625, 1709
AclWI	GGATC	4 cut(s)	1174, 1187, 1604, 1672
AcoI	YGGCCR	3 cut(s)	616, 1129, 1489
AcsI	RAATTY	5 cut(s)	460, 797, 1004, 1618, 1934
AcuI	CTGAAG	1 cut(s)	1142
AdeI	CACNNNGTG	1 cut(s)	34
AfaI	GTAC	3 cut(s)	204, 329, 1398
AfeI	AGCGCT	1 cut(s)	137
AfiI	CCNNNNNNNGG	4 cut(s)	614, 1220, 1750, 1751
AflIII	ACRYGT	2 cut(s)	856, 1143
AgeI	ACCGGT	1 cut(s)	951
AhlI	ACTAGT	1 cut(s)	1289
AjnI	CCWGG	3 cut(s)	123, 706, 1405
AluBI	AGCT	5 cut(s)	473, 574, 733, 896, 1647
AluI	AGCT	5 cut(s)	473, 574, 733, 896, 1647
Alw26I	GTCTC	4 cut(s)	109, 1376, 1516, 1649
AlwI	GGATC	4 cut(s)	1174, 1187, 1604, 1672
AlwNI	CAGNNNCTG	2 cut(s)	1196, 1599
Ama87I	CYCGRG	1 cut(s)	1872
Aor51HI	AGCGCT	1 cut(s)	137
AoxI	GGCC	7 cut(s)	257, 605, 616, 685, 943, 1129, 1489
ApeKI	GCWGC	4 cut(s)	81, 896, 1101, 1644
ApoI	RAATTY	5 cut(s)	460, 797, 1004, 1618, 1934
AsiGI	ACCGGT	1 cut(s)	951
Asp700I	GAANNNNTTC	1 cut(s)	732
AspLEI	GCGC	1 cut(s)	138
AspS9I	GGNCC	2 cut(s)	943, 1069
AsuHPI	GGTGA	5 cut(s)	798, 1127, 1235, 1394, 1495
AvaI	CYCGRG	1 cut(s)	1872
AvaII	GGWCC	1 cut(s)	1069
BalI	TGGCCA	2 cut(s)	1131, 1491
BamHI	GGATCC	1 cut(s)	1179
BauI	CACGAG	1 cut(s)	1550
BbsI	GAAGAC	1 cut(s)	971
BbvI	GCAGC	4 cut(s)	68, 883, 1088, 1656
BccI	CCATC	4 cut(s)	222, 1121, 1191, 1364
BceAI	ACGGC	1 cut(s)	603
BciT130I	CCWGG	3 cut(s)	125, 708, 1407
BcoDI	GTCTC	4 cut(s)	109, 1376, 1516, 1649
BcuI	ACTAGT	1 cut(s)	1289
BfaI	CTAG	1 cut(s)	1290
BfmI	CTRYAG	1 cut(s)	897
BfoI	RGCGCY	1 cut(s)	139
BglII	AGATCT	1 cut(s)	901
BisI	GCNGC	4 cut(s)	82, 897, 1102, 1645
BlpI	GCTNAGC	1 cut(s)	69
BlsI	GCNGC	4 cut(s)	83, 898, 1103, 1646
Bme1390I	CCNGG	3 cut(s)	125, 708, 1407
Bme18I	GGWCC	1 cut(s)	1069
BmeT110I	CYCGRG	1 cut(s)	1872
BmgT120I	GGNCC	2 cut(s)	943, 1069
BmiI	GGNNCC	3 cut(s)	987, 1181, 1457
BmrFI	CCNGG	3 cut(s)	125, 708, 1407
BmrI	ACTGGG	2 cut(s)	83, 527
BmsI	GCATC	4 cut(s)	890, 1002, 1325, 1948
BmuI	ACTGGG	2 cut(s)	83, 527
BpiI	GAAGAC	1 cut(s)	971
BpmI	CTGGAG	1 cut(s)	1809
Bpu1102I	GCTNAGC	1 cut(s)	69
BpuEI	CTTGAG	1 cut(s)	1731
BsaJI	CCNNGG	7 cut(s)	311, 335, 345, 613, 1090, 1215, 1405
BsaWI	WCCGGW	1 cut(s)	951
BsaXI	ACNNNNNCTCC	2 cut(s)	970, 1000
Bsc4I	CCNNNNNNNGG	4 cut(s)	614, 1220, 1750, 1751
Bse118I	RCCGGY	1 cut(s)	951
Bse1I	ACTGG	5 cut(s)	89, 522, 987, 1390, 1489
Bse3DI	GCAATG	1 cut(s)	741
BseBI	CCWGG	3 cut(s)	125, 708, 1407
BseDI	CCNNGG	7 cut(s)	311, 335, 345, 613, 1090, 1215, 1405
BseGI	GGATG	4 cut(s)	534, 1572, 1735, 1960
BseLI	CCNNNNNNNGG	4 cut(s)	614, 1220, 1750, 1751
BseMI	GCAATG	1 cut(s)	741
BseMII	CTCAG	1 cut(s)	83
BseNI	ACTGG	5 cut(s)	89, 522, 987, 1390, 1489
BseRI	GAGGAG	2 cut(s)	287, 1953
BseXI	GCAGC	4 cut(s)	68, 883, 1088, 1656
BseYI	CCCAGC	1 cut(s)	716
Bsh1236I	CGCG	1 cut(s)	417
BshFI	GGCC	7 cut(s)	259, 607, 618, 687, 945, 1131, 1491
BshTI	ACCGGT	1 cut(s)	951
BsiHKCI	CYCGRG	1 cut(s)	1872
BsiSI	CCGG	1 cut(s)	952
BslFI	GGGAC	1 cut(s)	468
BslI	CCNNNNNNNGG	4 cut(s)	614, 1220, 1750, 1751
BsmAI	GTCTC	4 cut(s)	109, 1376, 1516, 1649
BsmFI	GGGAC	1 cut(s)	468
BsnI	GGCC	7 cut(s)	259, 607, 618, 687, 945, 1131, 1491
BsoBI	CYCGRG	1 cut(s)	1872
Bsp143I	GATC	5 cut(s)	901, 1179, 1596, 1664, 1732
Bsp1720I	GCTNAGC	1 cut(s)	69
Bsp19I	CCATGG	1 cut(s)	335
Bsp68I	TCGCGA	1 cut(s)	417
BspACI	CCGC	2 cut(s)	625, 1709
BspANI	GGCC	7 cut(s)	259, 607, 618, 687, 945, 1131, 1491
BspCNI	CTCAG	1 cut(s)	82
BspFNI	CGCG	1 cut(s)	417
BspHI	TCATGA	1 cut(s)	130
BspLI	GGNNCC	3 cut(s)	987, 1181, 1457
BspMAI	CTGCAG	1 cut(s)	901
BspPI	GGATC	4 cut(s)	1174, 1187, 1604, 1672
BsrDI	GCAATG	1 cut(s)	741
BsrFI	RCCGGY	1 cut(s)	951
BsrI	ACTGG	5 cut(s)	89, 522, 987, 1390, 1489
BssAI	RCCGGY	1 cut(s)	951
BssECI	CCNNGG	7 cut(s)	311, 335, 345, 613, 1090, 1215, 1405
BssMI	GATC	5 cut(s)	901, 1179, 1596, 1664, 1732
BssSI	CACGAG	1 cut(s)	1550
BssT1I	CCWWGG	6 cut(s)	311, 335, 345, 613, 1090, 1215
Bst2BI	CACGAG	1 cut(s)	1550
Bst2UI	CCWGG	3 cut(s)	125, 708, 1407
Bst4CI	ACNGT	9 cut(s)	186, 223, 664, 700, 1042, 1198, 1532, 1660, 1974
Bst6I	CTCTTC	1 cut(s)	1161
BstAPI	GCANNNNNTGC	1 cut(s)	494
BstC8I	GCNNGC	2 cut(s)	66, 557
BstDEI	CTNAG	2 cut(s)	69, 373
BstDSI	CCRYGG	1 cut(s)	335
BstF5I	GGATG	4 cut(s)	534, 1572, 1735, 1960
BstFNI	CGCG	1 cut(s)	417
BstH2I	RGCGCY	1 cut(s)	139
BstHHI	GCGC	1 cut(s)	138
BstKTI	GATC	5 cut(s)	904, 1182, 1599, 1667, 1735
BstMAI	GTCTC	4 cut(s)	109, 1376, 1516, 1649
BstMBI	GATC	5 cut(s)	901, 1179, 1596, 1664, 1732
BstMWI	GCNNNNNNNGC	6 cut(s)	61, 70, 350, 494, 730, 775
BstNI	CCWGG	3 cut(s)	125, 708, 1407
BstNSI	RCATGY	5 cut(s)	559, 563, 860, 1147, 1676
BstSCI	CCNGG	3 cut(s)	123, 706, 1405
BstSFI	CTRYAG	1 cut(s)	897
BstUI	CGCG	1 cut(s)	417
BstV1I	GCAGC	4 cut(s)	68, 883, 1088, 1656
BstV2I	GAAGAC	1 cut(s)	971
BstX2I	RGATCY	4 cut(s)	901, 1179, 1596, 1664
BstYI	RGATCY	4 cut(s)	901, 1179, 1596, 1664
BsuRI	GGCC	7 cut(s)	259, 607, 618, 687, 945, 1131, 1491
BtgI	CCRYGG	1 cut(s)	335
BtgZI	GCGATG	1 cut(s)	241
BtsCI	GGATG	4 cut(s)	534, 1572, 1735, 1960
BtsI	GCAGTG	1 cut(s)	360
BtsIMutI	CAGTG	5 cut(s)	228, 360, 980, 1536, 1537
BtuMI	TCGCGA	1 cut(s)	417
Cac8I	GCNNGC	2 cut(s)	66, 557
CaiI	CAGNNNCTG	2 cut(s)	1196, 1599
CciI	TCATGA	1 cut(s)	130
CfoI	GCGC	1 cut(s)	138
Cfr10I	RCCGGY	1 cut(s)	951
Cfr13I	GGNCC	2 cut(s)	943, 1069
CsiI	ACCWGGT	1 cut(s)	123
Csp6I	GTAC	3 cut(s)	203, 328, 1397
CspAI	ACCGGT	1 cut(s)	951
CviQI	GTAC	3 cut(s)	203, 328, 1397
DdeI	CTNAG	2 cut(s)	69, 373
DpnI	GATC	5 cut(s)	903, 1181, 1598, 1666, 1734
DpnII	GATC	5 cut(s)	901, 1179, 1596, 1664, 1732
DraIII	CACNNNGTG	1 cut(s)	34
EaeI	YGGCCR	3 cut(s)	616, 1129, 1489
Eam1104I	CTCTTC	1 cut(s)	1161
EarI	CTCTTC	1 cut(s)	1161
Eco130I	CCWWGG	6 cut(s)	311, 335, 345, 613, 1090, 1215
Eco47I	GGWCC	1 cut(s)	1069
Eco47III	AGCGCT	1 cut(s)	137
Eco57I	CTGAAG	1 cut(s)	1142
Eco88I	CYCGRG	1 cut(s)	1872
EcoRI	GAATTC	2 cut(s)	1004, 1618
EcoRII	CCWGG	3 cut(s)	123, 706, 1405
EcoT14I	CCWWGG	6 cut(s)	311, 335, 345, 613, 1090, 1215
EcoT22I	ATGCAT	1 cut(s)	561
ErhI	CCWWGG	6 cut(s)	311, 335, 345, 613, 1090, 1215
FalI	AAGNNNNNCTT	2 cut(s)	1885, 1917
FaqI	GGGAC	1 cut(s)	468
Fnu4HI	GCNGC	4 cut(s)	82, 897, 1102, 1645
FokI	GGATG	4 cut(s)	541, 1579, 1742, 1967
Fsp4HI	GCNGC	4 cut(s)	82, 897, 1102, 1645
FspBI	CTAG	1 cut(s)	1290
GlaI	GCGC	1 cut(s)	137
GluI	GCNGC	4 cut(s)	82, 897, 1102, 1645
GsaI	CCCAGC	1 cut(s)	720
GsuI	CTGGAG	1 cut(s)	1809
HaeII	RGCGCY	1 cut(s)	139
HaeIII	GGCC	7 cut(s)	259, 607, 618, 687, 945, 1131, 1491
HapII	CCGG	1 cut(s)	952
HhaI	GCGC	1 cut(s)	138
Hin6I	GCGC	1 cut(s)	136
HinP1I	GCGC	1 cut(s)	136
HincII	GTYRAC	1 cut(s)	787
HindII	GTYRAC	1 cut(s)	787
HindIII	AAGCTT	1 cut(s)	731
HpaII	CCGG	1 cut(s)	952
HphI	GGTGA	5 cut(s)	798, 1127, 1235, 1394, 1495
Hpy166II	GTNNAC	1 cut(s)	787
Hpy8I	GTNNAC	1 cut(s)	787
HpyAV	CCTTC	5 cut(s)	192, 1170, 1315, 1759, 1766
HpyCH4III	ACNGT	9 cut(s)	186, 223, 664, 700, 1042, 1198, 1532, 1660, 1974
HpyCH4V	TGCA	9 cut(s)	242, 386, 488, 544, 559, 899, 1104, 1190, 1316
HpyF10VI	GCNNNNNNNGC	6 cut(s)	61, 70, 350, 494, 730, 775
HpyF3I	CTNAG	2 cut(s)	69, 373
HspAI	GCGC	1 cut(s)	136
Kzo9I	GATC	5 cut(s)	901, 1179, 1596, 1664, 1732
LmnI	GCTCC	3 cut(s)	991, 1461, 1966
Lsp1109I	GCAGC	4 cut(s)	68, 883, 1088, 1656
LweI	GCATC	4 cut(s)	890, 1002, 1325, 1948
MabI	ACCWGGT	1 cut(s)	123
MaeI	CTAG	1 cut(s)	1290
MaeIII	GTNAC	5 cut(s)	694, 1061, 1192, 1501, 1780
MalI	GATC	5 cut(s)	903, 1181, 1598, 1666, 1734
MboI	GATC	5 cut(s)	901, 1179, 1596, 1664, 1732
MfeI	CAATTG	3 cut(s)	76, 938, 1359
MflI	RGATCY	4 cut(s)	901, 1179, 1596, 1664
MlsI	TGGCCA	2 cut(s)	1131, 1491
MluNI	TGGCCA	2 cut(s)	1131, 1491
MlyI	GAGTC	2 cut(s)	428, 1459
MmeI	TCCRAC	2 cut(s)	1642, 1764
Mox20I	TGGCCA	2 cut(s)	1131, 1491
Mph1103I	ATGCAT	1 cut(s)	561
MroXI	GAANNNNTTC	1 cut(s)	732
MscI	TGGCCA	2 cut(s)	1131, 1491
MseI	TTAA	6 cut(s)	588, 930, 1107, 1167, 1851, 1938
Msp20I	TGGCCA	2 cut(s)	1131, 1491
MspA1I	CMGCKG	1 cut(s)	473
MspI	CCGG	1 cut(s)	952
MspR9I	CCNGG	3 cut(s)	125, 708, 1407
MunI	CAATTG	3 cut(s)	76, 938, 1359
MvaI	CCWGG	3 cut(s)	125, 708, 1407
MvnI	CGCG	1 cut(s)	417
MwoI	GCNNNNNNNGC	6 cut(s)	61, 70, 350, 494, 730, 775
NcoI	CCATGG	1 cut(s)	335
NdeII	GATC	5 cut(s)	901, 1179, 1596, 1664, 1732
NlaIV	GGNNCC	3 cut(s)	987, 1181, 1457
NmuCI	GTSAC	3 cut(s)	1061, 1501, 1780
NruI	TCGCGA	1 cut(s)	417
NsiI	ATGCAT	1 cut(s)	561
NspI	RCATGY	5 cut(s)	559, 563, 860, 1147, 1676
PaeI	GCATGC	1 cut(s)	559
PaeR7I	CTCGAG	1 cut(s)	1872
PagI	TCATGA	1 cut(s)	130
PciI	ACATGT	2 cut(s)	856, 1143
PdmI	GAANNNNTTC	1 cut(s)	732
PfeI	GAWTC	9 cut(s)	212, 292, 845, 1031, 1095, 1471, 1546, 1637, 1898
PfoI	TCCNGGA	1 cut(s)	706
PinAI	ACCGGT	1 cut(s)	951
PkrI	GCNGC	4 cut(s)	83, 898, 1103, 1646
PleI	GAGTC	2 cut(s)	427, 1458
PpsI	GAGTC	2 cut(s)	427, 1458
PscI	ACATGT	2 cut(s)	856, 1143
Psp6I	CCWGG	3 cut(s)	123, 706, 1405
PspFI	CCCAGC	1 cut(s)	716
PspGI	CCWGG	3 cut(s)	123, 706, 1405
PspN4I	GGNNCC	3 cut(s)	987, 1181, 1457
PspPI	GGNCC	2 cut(s)	943, 1069
PsrI	GAACNNNNNNTAC	2 cut(s)	1285, 1317
PstI	CTGCAG	1 cut(s)	901
PstNI	CAGNNNCTG	2 cut(s)	1196, 1599
PsuI	RGATCY	4 cut(s)	901, 1179, 1596, 1664
PvuII	CAGCTG	1 cut(s)	473
RruI	TCGCGA	1 cut(s)	417
RsaI	GTAC	3 cut(s)	204, 329, 1398
RsaNI	GTAC	3 cut(s)	203, 328, 1397
SaqAI	TTAA	6 cut(s)	588, 930, 1107, 1167, 1851, 1938
SatI	GCNGC	4 cut(s)	82, 897, 1102, 1645
Sau3AI	GATC	5 cut(s)	901, 1179, 1596, 1664, 1732
Sau96I	GGNCC	2 cut(s)	943, 1069
SchI	GAGTC	2 cut(s)	428, 1459
ScrFI	CCNGG	3 cut(s)	125, 708, 1407
SexAI	ACCWGGT	1 cut(s)	123
SfaNI	GCATC	4 cut(s)	890, 1002, 1325, 1948
SfcI	CTRYAG	1 cut(s)	897
Sfr274I	CTCGAG	1 cut(s)	1872
SinI	GGWCC	1 cut(s)	1069
SlaI	CTCGAG	1 cut(s)	1872
SmlI	CTYRAG	2 cut(s)	1746, 1872
SmoI	CTYRAG	2 cut(s)	1746, 1872
SpeI	ACTAGT	1 cut(s)	1289
SphI	GCATGC	1 cut(s)	559
SsiI	CCGC	2 cut(s)	625, 1709
SspI	AATATT	2 cut(s)	1165, 1681
SspMI	CTAG	1 cut(s)	1290
StyD4I	CCNGG	3 cut(s)	123, 706, 1405
StyI	CCWWGG	6 cut(s)	311, 335, 345, 613, 1090, 1215
TaaI	ACNGT	9 cut(s)	186, 223, 664, 700, 1042, 1198, 1532, 1660, 1974
TaqI	TCGA	2 cut(s)	171, 1873
TaqII	GACCGA	1 cut(s)	1086
TatI	WGTACW	1 cut(s)	327
TfiI	GAWTC	9 cut(s)	212, 292, 845, 1031, 1095, 1471, 1546, 1637, 1898
Tru1I	TTAA	6 cut(s)	588, 930, 1107, 1167, 1851, 1938
Tru9I	TTAA	6 cut(s)	588, 930, 1107, 1167, 1851, 1938
TscAI	CASTG	5 cut(s)	228, 360, 987, 1537, 1543
TseFI	GTSAC	3 cut(s)	1061, 1501, 1780
TseI	GCWGC	4 cut(s)	81, 896, 1101, 1644
Tsp45I	GTSAC	3 cut(s)	1061, 1501, 1780
TspDTI	ATGAA	6 cut(s)	119, 625, 852, 1014, 1023, 1278
TspRI	CASTG	5 cut(s)	228, 360, 987, 1537, 1543
VpaK11BI	GGWCC	1 cut(s)	1069
XapI	RAATTY	5 cut(s)	460, 797, 1004, 1618, 1934
XceI	RCATGY	5 cut(s)	559, 563, 860, 1147, 1676
XcmI	CCANNNNNNNNNTGG	1 cut(s)	352
XhoI	CTCGAG	1 cut(s)	1872
XmnI	GAANNNNTTC	1 cut(s)	732
XspI	CTAG	1 cut(s)	1290
Zsp2I	ATGCAT	1 cut(s)	561

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.