Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0000936

Physical Location & Seq

Genomic Coordinates Forward (+)

39298918 .. 39304769

Gene Structure 5852 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1276000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2085 bp

ATGGATATAACAGAGGTGTCAATAATTCACCATGTGGGGATTGTGTTATGTATGCTGTGGTTGCTCTCCCACTACAATTACTGCCACCCAGTTGCCTACTTTTTATCTCTCATTTATCTTTACCTGGTTCATGATAGGTACATTACGAGATTGCGGAAGAAATTACAGTTCGAGGAAAGAAAACAGGCTAATCAGAGACGGTTGCTTTATTGGTTAAATATTATGCCTTACGACATGTTCAACAAACCGATGAAAAAAGAGAAAAAAATCCACCCCAAGAAATGTTGTTGGAAATGGAGCAAAAATTTAAACCTTAATGTGCTTTCTGATTCTGAGACGGTGCTGTGGTTGAACCACACAATTGAAAAGATATGGCCTATATGTATGGAACAGATTGCTTCACAGAAGATCCTTATCCCCATCATACCTTGGTTTCTGGAGAAGTACAAGCCATGGACTGCCAAGCAAGCAGTAGTTCAGCACCTTTACTTGGGAAGAAATGCACCTATACTCACAGATATGAGAGTGGTTCGCCAGTCTACTGATGATGATCACCTGGTTCTGGAGTTGGGATTGAATTTTCTTACAGCTGATGATATGATCGCAATACTTGCTGTGAAGTTAAGGAAAAGACTAGGTTTTGGGATGTGGGCAAAGTTGAATATTACAGGCATGCATGTTGAAGGAAAGGTCTTGATTGGAGTGAAGTTTCTTCGCAGGTGGCCATTTCTTGGCCGCGTGCGGCTATGCTTCGTTGACCCTCCATATTTTCAGATGACTGTTAAACCTATTTTCACTCATGGACTTGACGTTACAGTACTCCCTGGGATTGCTGGATGGCTGGAGAAGCTTCTGTCAATTGCCTTTGAGCAGACACTTGTTGAGCCTAATATGCTGGTTGTTGACATGGAGAAATTTGTTTCCCCAAAGCAAGAAAGTTGGTTCTCTGTGAATGAGAAGGAGCCTCTTGCTCTTGCCAAAGTAGAAGTTATTGAAGCATCTGACGTGAAAGCCGCCGATTTAAATGGATTTTCTGACCCTTATGTTAAGGGTCAATTGGGCCTTTACCGGTTCAAGACTAAGATACAAAAGAAAACACTGTCTCCAAAATGGCATGAGGAGTTCAAGATCCCCATTATTACATGGGATTCACCTAATGTGCTTGCTATTGAACTTTGTGACAAGGACCGATTCGTTGATGATGCCCTTGGTGACTGCTCGATTAACATTGGTGATCTTAGAGACGGCCAGAGACATGACATGTGGGTGCCTCTTCAGAATATTAAAACCGGGAGGCTGCATCTTGCAATAACTGTTCTTGAAGACAATGTGAAGGGACCCGAGCAGTCAGAAGTTCAGGAAACGGTAGATTTGGAAGATAAAAGAAATTCATTTGCCAGTGATGCTAATCAAAGTTCCTTCTCATCTATATCATCCGAGAAGTCTAACAGGTTGGCAGATAACTTTGAGCCGATTGACGTTGAAGGGCAAAAAGAGACTGGTATATGGGTCCATCATCCAGGAAGTAAAGTTTTACAAACTTGGGAAAGTAGAAAAGGAAGGAGCCGACTCCTTGATACCGAGATTCTAAATGATACTAACAGCCGTAATTCAGTCACATCTGGCTCCCAAAACAATGACGATGGAGGCACGGATAAAAATCCTGACGAGAAACGGCACATGAAAGGAGTTCGCAAGGGACTAAATAAGTTATGTTCGATGCTCCACAGGAGTTCCAAGAAGGAGCCGAGTACAAGCAGCTTTAAAGAGACCGCTCGTTCTCAAAGTATTAATCTTAGAGGAGTTCATGACAATGAAAGTGGGGTGAAATTCATTGTGGAAGATGACCTTTCTAGGCCTCTTTCTTGTAAGGTTCGGGAAGAAAAGGATTTCACTTCTGCAGGAGGGAGTGGTTCAGGTACCCCGGGAAAGGGCAAGTTGAGAGAGATGAAAAGTTTCTTCAAGCGTAATGAAAAATCTGATCGAAAAGATTTTGCAAAGTCTCAAAGTGATTCTTCGGTAGTGAAAGAAAGAGAAATGTTAGAATATTACAACTCTTCTGATGATGATCCTCTGCCCAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0005886 GO:0012505 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00290 ko00650 ko00660 ko00770 ko01100 ko01110 ko01130 ko01210 ko01230 map00290 map00650 map00660 map00770 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

C2 SMP_LBD

Protein Analysis

695

Amino Acids

79.73

Weight (kDa)

8.77

Isoelectric Point (pI)

43.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SMP_MUG190-like	PF25669	227 - 308	2.8e-08	MUG190-like SMP domain
C2	PF00168	327 - 425	7.9e-21	C2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000936)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53590 AT3G14590 AT3G14590 AT3G14590 AT3G14590 AT3G14590
fragaria_vesca	FvH4_3g16980 FvH4_3g16980 FvH4_3g16980 FvH4_3g16980 FvH4_3g16980 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020
malus_domestica	MD00G1185500.v1.1 MD00G1185600.v1.1 MD03G1254200.v1.1 MD03G1254900.v1.1 MD11G1275800.v1.1 MD11G1276000.v1.1
prunus_persica	Prupe.4G152200_v2.0.a1 Prupe.4G152200_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1
pyrus_communis	pycom03g20170 pycom03g20190 pycom11g24400
rosa_chinensis	RchiOBHm_Chr2g0135571 RchiOBHm_Chr2g0159501 RchiOBHm_Chr2g0159511 RchiOBHm_Chr5g0028301 RchiOBHm_Chr5g0028351 RchiOBHm_Chr5g0039631
rosa_laevigata	RLG00000033080 RLG00000033088
rosa_multiflora	Rmu_sc0001020.1_g000001 Rmu_sc0002481.1_g000040 Rmu_sc0008526.1_g000010
rosa_roxburghii	Rroxscaffold_1G00051350 Rroxscaffold_1G00051420 Rroxscaffold_1G00051430
rosa_rugosa	Rorug05G0105600
rosa_samantha	Rh1AG292900 Rh4AG059100 Rh5AG199100 Rh5AG199600 Rh5BG197700 Rh5BG198100 Rh5CG217400 Rh5CG218100 Rh5DG199400 Rh5DG200000 Rh7DG370100
rosa_wichuraiana	Rw4G016870 Rw5G018160 Rw5G018190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	708
Acc36I	ACCTGC	1 cut(s)	708
Acc65I	GGTACC	1 cut(s)	1919
AccB1I	GGYRCC	2 cut(s)	1267, 1919
AccB7I	CCANNNNNTGG	1 cut(s)	731
AccBSI	CCGCTC	1 cut(s)	1775
AccI	GTMKAC	1 cut(s)	539
AccII	CGCG	1 cut(s)	738
AciI	CCGC	5 cut(s)	154, 736, 742, 1014, 1773
AclWI	GGATC	3 cut(s)	403, 1123, 2063
AcoI	YGGCCR	3 cut(s)	722, 733, 1246
AcsI	RAATTY	5 cut(s)	304, 577, 914, 1387, 1829
AcuI	CTGAAG	1 cut(s)	1259
AdeI	CACNNNGTG	1 cut(s)	34
AfaI	GTAC	5 cut(s)	140, 446, 819, 1753, 1921
AfiI	CCNNNNNNNGG	5 cut(s)	490, 562, 731, 1930, 1931
AflIII	ACRYGT	2 cut(s)	234, 1260
AgeI	ACCGGT	1 cut(s)	1068
AjiI	CACGTC	1 cut(s)	1006
AjnI	CCWGG	4 cut(s)	123, 555, 823, 1519
AluBI	AGCT	3 cut(s)	590, 850, 1761
AluI	AGCT	3 cut(s)	590, 850, 1761
Alw26I	GTCTC	8 cut(s)	190, 329, 1107, 1236, 1246, 1490, 1763, 2007
AlwI	GGATC	3 cut(s)	403, 1123, 2063
Ama87I	CYCGRG	2 cut(s)	1340, 1924
AoxI	GGCC	6 cut(s)	374, 722, 733, 1060, 1246, 1856
ApeKI	GCWGC	2 cut(s)	1297, 1758
ApoI	RAATTY	5 cut(s)	304, 577, 914, 1387, 1829
AseI	ATTAAT	1 cut(s)	1791
AsiGI	ACCGGT	1 cut(s)	1068
Asp700I	GAANNNNTTC	1 cut(s)	1955
Asp718I	GGTACC	1 cut(s)	1919
AspS9I	GGNCC	4 cut(s)	1060, 1186, 1337, 1510
AsuC2I	CCSGG	3 cut(s)	1291, 1925, 1926
AsuHPI	GGTGA	6 cut(s)	20, 545, 1143, 1223, 1244, 1837
AvaI	CYCGRG	2 cut(s)	1340, 1924
AvaII	GGWCC	3 cut(s)	1186, 1337, 1510
BalI	TGGCCA	1 cut(s)	724
BanI	GGYRCC	2 cut(s)	1267, 1919
BbsI	GAAGAC	1 cut(s)	1329
BbvI	GCAGC	2 cut(s)	1284, 1770
BccI	CCATC	4 cut(s)	428, 831, 1521, 1637
BceAI	ACGGC	3 cut(s)	1261, 1590, 1691
BciT130I	CCWGG	4 cut(s)	125, 557, 825, 1521
BclI	TGATCA	1 cut(s)	550
BcnI	CCSGG	3 cut(s)	1291, 1925, 1926
BcoDI	GTCTC	8 cut(s)	190, 329, 1107, 1236, 1246, 1490, 1763, 2007
BfaI	CTAG	2 cut(s)	635, 1854
BfmI	CTRYAG	1 cut(s)	1899
BfuAI	ACCTGC	1 cut(s)	708
BisI	GCNGC	5 cut(s)	736, 743, 1014, 1298, 1759
BlsI	GCNGC	5 cut(s)	737, 744, 1015, 1299, 1760
BmcAI	AGTACT	1 cut(s)	819
Bme1390I	CCNGG	7 cut(s)	125, 557, 825, 1291, 1521, 1925, 1926
Bme18I	GGWCC	3 cut(s)	1186, 1337, 1510
BmeT110I	CYCGRG	2 cut(s)	1340, 1924
BmgBI	CACGTC	1 cut(s)	1006
BmgT120I	GGNCC	4 cut(s)	1060, 1186, 1337, 1510
BmiI	GGNNCC	9 cut(s)	963, 1269, 1338, 1339, 1511, 1565, 1627, 1746, 1921
BmrFI	CCNGG	7 cut(s)	125, 557, 825, 1291, 1521, 1925, 1926
BmrI	ACTGGG	1 cut(s)	83
BmsI	GCATC	5 cut(s)	1007, 1192, 1309, 1393, 1710
BmuI	ACTGGG	1 cut(s)	83
BpiI	GAAGAC	1 cut(s)	1329
BpmI	CTGGAG	3 cut(s)	458, 584, 863
BpuMI	CCSGG	3 cut(s)	1291, 1925, 1926
BsaBI	GATNNNNATC	5 cut(s)	413, 549, 1407, 1659, 2067
BsaI	GGTCTC	1 cut(s)	1763
BsaJI	CCNNGG	7 cut(s)	428, 452, 823, 824, 1207, 1923, 1924
BsaWI	WCCGGW	1 cut(s)	1068
BsaXI	ACNNNNNCTCC	2 cut(s)	1087, 1117
Bsc4I	CCNNNNNNNGG	5 cut(s)	490, 562, 731, 1930, 1931
Bse118I	RCCGGY	1 cut(s)	1068
Bse1I	ACTGG	4 cut(s)	89, 535, 1398, 1504
Bse8I	GATNNNNATC	5 cut(s)	413, 549, 1407, 1659, 2067
BseBI	CCWGG	4 cut(s)	125, 557, 825, 1521
BseDI	CCNNGG	7 cut(s)	428, 452, 823, 824, 1207, 1923, 1924
BseGI	GGATG	4 cut(s)	651, 842, 1433, 1516
BseJI	GATNNNNATC	5 cut(s)	413, 549, 1407, 1659, 2067
BseLI	CCNNNNNNNGG	5 cut(s)	490, 562, 731, 1930, 1931
BseMII	CTCAG	1 cut(s)	324
BseNI	ACTGG	4 cut(s)	89, 535, 1398, 1504
BseRI	GAGGAG	2 cut(s)	1133, 1815
BseXI	GCAGC	2 cut(s)	1284, 1770
Bsh1236I	CGCG	1 cut(s)	738
BshFI	GGCC	6 cut(s)	376, 724, 735, 1062, 1248, 1858
BshNI	GGYRCC	2 cut(s)	1267, 1919
BshTI	ACCGGT	1 cut(s)	1068
BsiHKCI	CYCGRG	2 cut(s)	1340, 1924
BsiSI	CCGG	3 cut(s)	1069, 1290, 1925
BslFI	GGGAC	2 cut(s)	1350, 1713
BslI	CCNNNNNNNGG	5 cut(s)	490, 562, 731, 1930, 1931
BsmAI	GTCTC	8 cut(s)	190, 329, 1107, 1236, 1246, 1490, 1763, 2007
BsmBI	CGTCTC	3 cut(s)	190, 329, 1236
BsmFI	GGGAC	2 cut(s)	1350, 1713
BsnI	GGCC	6 cut(s)	376, 724, 735, 1062, 1248, 1858
Bso31I	GGTCTC	1 cut(s)	1763
BsoBI	CYCGRG	2 cut(s)	1340, 1924
Bsp143I	GATC	7 cut(s)	408, 550, 600, 1128, 1234, 1981, 2068
Bsp19I	CCATGG	1 cut(s)	452
BspACI	CCGC	5 cut(s)	154, 736, 742, 1014, 1773
BspANI	GGCC	6 cut(s)	376, 724, 735, 1062, 1248, 1858
BspCNI	CTCAG	1 cut(s)	325
BspFNI	CGCG	1 cut(s)	738
BspHI	TCATGA	2 cut(s)	130, 1807
BspLI	GGNNCC	9 cut(s)	963, 1269, 1338, 1339, 1511, 1565, 1627, 1746, 1921
BspMAI	CTGCAG	1 cut(s)	1903
BspMI	ACCTGC	1 cut(s)	708
BspPI	GGATC	3 cut(s)	403, 1123, 2063
BspT107I	GGYRCC	2 cut(s)	1267, 1919
BspTNI	GGTCTC	1 cut(s)	1763
BsrBI	CCGCTC	1 cut(s)	1775
BsrFI	RCCGGY	1 cut(s)	1068
BsrI	ACTGG	4 cut(s)	89, 535, 1398, 1504
BssAI	RCCGGY	1 cut(s)	1068
BssECI	CCNNGG	7 cut(s)	428, 452, 823, 824, 1207, 1923, 1924
BssMI	GATC	7 cut(s)	408, 550, 600, 1128, 1234, 1981, 2068
BssT1I	CCWWGG	3 cut(s)	428, 452, 1207
Bst2UI	CCWGG	4 cut(s)	125, 557, 825, 1521
Bst4CI	ACNGT	8 cut(s)	168, 201, 340, 781, 817, 1101, 1315, 1366
Bst6I	CTCTTC	2 cut(s)	1278, 2062
BstAPI	GCANNNNNTGC	1 cut(s)	611
BstC8I	GCNNGC	4 cut(s)	468, 674, 740, 1164
BstDEI	CTNAG	4 cut(s)	333, 1080, 1238, 1796
BstDSI	CCRYGG	1 cut(s)	452
BstF5I	GGATG	4 cut(s)	651, 842, 1433, 1516
BstFNI	CGCG	1 cut(s)	738
BstKTI	GATC	7 cut(s)	411, 553, 603, 1131, 1237, 1984, 2071
BstMAI	GTCTC	8 cut(s)	190, 329, 1107, 1236, 1246, 1490, 1763, 2007
BstMBI	GATC	7 cut(s)	408, 550, 600, 1128, 1234, 1981, 2068
BstMWI	GCNNNNNNNGC	6 cut(s)	61, 467, 611, 847, 892, 1403
BstNI	CCWGG	4 cut(s)	125, 557, 825, 1521
BstNSI	RCATGY	4 cut(s)	238, 676, 680, 1264
BstSCI	CCNGG	7 cut(s)	123, 555, 823, 1289, 1519, 1923, 1924
BstSFI	CTRYAG	1 cut(s)	1899
BstUI	CGCG	1 cut(s)	738
BstV1I	GCAGC	2 cut(s)	1284, 1770
BstV2I	GAAGAC	1 cut(s)	1329
BstX2I	RGATCY	2 cut(s)	408, 1128
BstYI	RGATCY	2 cut(s)	408, 1128
BsuRI	GGCC	6 cut(s)	376, 724, 735, 1062, 1248, 1858
BtgI	CCRYGG	1 cut(s)	452
BtrI	CACGTC	1 cut(s)	1006
BtsCI	GGATG	4 cut(s)	651, 842, 1433, 1516
BtsIMutI	CAGTG	2 cut(s)	1097, 1405
BveI	ACCTGC	1 cut(s)	708
Cac8I	GCNNGC	4 cut(s)	468, 674, 740, 1164
CciI	TCATGA	2 cut(s)	130, 1807
Cfr10I	RCCGGY	1 cut(s)	1068
Cfr13I	GGNCC	4 cut(s)	1060, 1186, 1337, 1510
Cfr9I	CCCGGG	1 cut(s)	1924
CsiI	ACCWGGT	2 cut(s)	123, 555
Csp6I	GTAC	5 cut(s)	139, 445, 818, 1752, 1920
CspAI	ACCGGT	1 cut(s)	1068
CspCI	CAANNNNNGTGG	2 cut(s)	1801, 1836
CviQI	GTAC	5 cut(s)	139, 445, 818, 1752, 1920
DdeI	CTNAG	4 cut(s)	333, 1080, 1238, 1796
DpnI	GATC	7 cut(s)	410, 552, 602, 1130, 1236, 1983, 2070
DpnII	GATC	7 cut(s)	408, 550, 600, 1128, 1234, 1981, 2068
DraI	TTTAAA	3 cut(s)	309, 1023, 1765
DraIII	CACNNNGTG	1 cut(s)	34
EaeI	YGGCCR	3 cut(s)	722, 733, 1246
Eam1104I	CTCTTC	2 cut(s)	1278, 2062
EarI	CTCTTC	2 cut(s)	1278, 2062
Eco130I	CCWWGG	3 cut(s)	428, 452, 1207
Eco147I	AGGCCT	1 cut(s)	1858
Eco31I	GGTCTC	1 cut(s)	1763
Eco47I	GGWCC	3 cut(s)	1186, 1337, 1510
Eco57I	CTGAAG	1 cut(s)	1259
Eco88I	CYCGRG	2 cut(s)	1340, 1924
EcoO109I	RGGNCCY	1 cut(s)	1337
EcoRII	CCWGG	4 cut(s)	123, 555, 823, 1519
EcoT14I	CCWWGG	3 cut(s)	428, 452, 1207
EcoT22I	ATGCAT	1 cut(s)	678
ErhI	CCWWGG	3 cut(s)	428, 452, 1207
Esp3I	CGTCTC	3 cut(s)	190, 329, 1236
FalI	AAGNNNNNCTT	4 cut(s)	1833, 1865, 1999, 2031
FaqI	GGGAC	2 cut(s)	1350, 1713
FbaI	TGATCA	1 cut(s)	550
FblI	GTMKAC	1 cut(s)	539
Fnu4HI	GCNGC	5 cut(s)	736, 743, 1014, 1298, 1759
FokI	GGATG	4 cut(s)	658, 849, 1420, 1503
Fsp4HI	GCNGC	5 cut(s)	736, 743, 1014, 1298, 1759
FspBI	CTAG	2 cut(s)	635, 1854
GluI	GCNGC	5 cut(s)	736, 743, 1014, 1298, 1759
GsuI	CTGGAG	3 cut(s)	458, 584, 863
HaeIII	GGCC	6 cut(s)	376, 724, 735, 1062, 1248, 1858
HapII	CCGG	3 cut(s)	1069, 1290, 1925
HincII	GTYRAC	2 cut(s)	757, 904
HindII	GTYRAC	2 cut(s)	757, 904
HindIII	AAGCTT	1 cut(s)	848
HinfI	GANTC	6 cut(s)	329, 1148, 1191, 1569, 1585, 2012
HpaII	CCGG	3 cut(s)	1069, 1290, 1925
HphI	GGTGA	6 cut(s)	20, 545, 1143, 1223, 1244, 1837
Hpy166II	GTNNAC	3 cut(s)	540, 757, 904
Hpy8I	GTNNAC	3 cut(s)	540, 757, 904
HpyAV	CCTTC	7 cut(s)	677, 952, 1327, 1429, 1478, 1554, 1735
HpyCH4III	ACNGT	8 cut(s)	168, 201, 340, 781, 817, 1101, 1315, 1366
HpyCH4IV	ACGT	3 cut(s)	810, 1005, 1479
HpyCH4V	TGCA	6 cut(s)	503, 676, 1300, 1307, 1901, 1997
HpyF10VI	GCNNNNNNNGC	6 cut(s)	61, 467, 611, 847, 892, 1403
HpyF3I	CTNAG	4 cut(s)	333, 1080, 1238, 1796
HpySE526I	ACGT	3 cut(s)	810, 1005, 1479
KflI	GGGWCCC	1 cut(s)	1337
KpnI	GGTACC	1 cut(s)	1923
Ksp22I	TGATCA	1 cut(s)	550
Kzo9I	GATC	7 cut(s)	408, 550, 600, 1128, 1234, 1981, 2068
LmnI	GCTCC	6 cut(s)	297, 961, 1563, 1631, 1728, 1744
Lsp1109I	GCAGC	2 cut(s)	1284, 1770
LweI	GCATC	5 cut(s)	1007, 1192, 1309, 1393, 1710
MabI	ACCWGGT	2 cut(s)	123, 555
MaeI	CTAG	2 cut(s)	635, 1854
MaeII	ACGT	3 cut(s)	810, 1005, 1479
MaeIII	GTNAC	4 cut(s)	811, 1178, 1211, 1615
MalI	GATC	7 cut(s)	410, 552, 602, 1130, 1236, 1983, 2070
MbiI	CCGCTC	1 cut(s)	1775
MboI	GATC	7 cut(s)	408, 550, 600, 1128, 1234, 1981, 2068
MfeI	CAATTG	3 cut(s)	360, 858, 1055
MflI	RGATCY	2 cut(s)	408, 1128
MlsI	TGGCCA	1 cut(s)	724
MluNI	TGGCCA	1 cut(s)	724
MlyI	GAGTC	1 cut(s)	1563
MmeI	TCCRAC	1 cut(s)	269
Mox20I	TGGCCA	1 cut(s)	724
Mph1103I	ATGCAT	1 cut(s)	678
MroXI	GAANNNNTTC	1 cut(s)	1955
MscI	TGGCCA	1 cut(s)	724
MslI	CAYNNNNRTG	3 cut(s)	518, 1265, 1812
Msp20I	TGGCCA	1 cut(s)	724
MspA1I	CMGCKG	1 cut(s)	590
MspI	CCGG	3 cut(s)	1069, 1290, 1925
MspR9I	CCNGG	7 cut(s)	125, 557, 825, 1291, 1521, 1925, 1926
MunI	CAATTG	3 cut(s)	360, 858, 1055
MvaI	CCWGG	4 cut(s)	125, 557, 825, 1521
MvnI	CGCG	1 cut(s)	738
MwoI	GCNNNNNNNGC	6 cut(s)	61, 467, 611, 847, 892, 1403
NciI	CCSGG	3 cut(s)	1291, 1925, 1926
NcoI	CCATGG	1 cut(s)	452
NdeII	GATC	7 cut(s)	408, 550, 600, 1128, 1234, 1981, 2068
NlaIV	GGNNCC	9 cut(s)	963, 1269, 1338, 1339, 1511, 1565, 1627, 1746, 1921
NmeAIII	GCCGAG	1 cut(s)	1773
NmuCI	GTSAC	3 cut(s)	1178, 1211, 1615
NsiI	ATGCAT	1 cut(s)	678
NspI	RCATGY	4 cut(s)	238, 676, 680, 1264
PaeI	GCATGC	1 cut(s)	676
PagI	TCATGA	2 cut(s)	130, 1807
PaqCI	CACCTGC	1 cut(s)	708
PasI	CCCWGGG	1 cut(s)	824
PceI	AGGCCT	1 cut(s)	1858
PciI	ACATGT	2 cut(s)	234, 1260
PdmI	GAANNNNTTC	1 cut(s)	1955
PfeI	GAWTC	5 cut(s)	329, 1148, 1191, 1585, 2012
PflMI	CCANNNNNTGG	1 cut(s)	731
PfoI	TCCNGGA	1 cut(s)	1519
PinAI	ACCGGT	1 cut(s)	1068
PkrI	GCNGC	5 cut(s)	737, 744, 1015, 1299, 1760
PleI	GAGTC	1 cut(s)	1563
PpsI	GAGTC	1 cut(s)	1563
PpuMI	RGGWCCY	1 cut(s)	1337
PscI	ACATGT	2 cut(s)	234, 1260
PshBI	ATTAAT	1 cut(s)	1791
Psp5II	RGGWCCY	1 cut(s)	1337
Psp6I	CCWGG	4 cut(s)	123, 555, 823, 1519
PspGI	CCWGG	4 cut(s)	123, 555, 823, 1519
PspN4I	GGNNCC	9 cut(s)	963, 1269, 1338, 1339, 1511, 1565, 1627, 1746, 1921
PspPI	GGNCC	4 cut(s)	1060, 1186, 1337, 1510
PspPPI	RGGWCCY	1 cut(s)	1337
PstI	CTGCAG	1 cut(s)	1903
PsuI	RGATCY	2 cut(s)	408, 1128
PvuII	CAGCTG	1 cut(s)	590
RsaI	GTAC	5 cut(s)	140, 446, 819, 1753, 1921
RsaNI	GTAC	5 cut(s)	139, 445, 818, 1752, 1920
RseI	CAYNNNNRTG	3 cut(s)	518, 1265, 1812
SatI	GCNGC	5 cut(s)	736, 743, 1014, 1298, 1759
Sau3AI	GATC	7 cut(s)	408, 550, 600, 1128, 1234, 1981, 2068
Sau96I	GGNCC	4 cut(s)	1060, 1186, 1337, 1510
ScaI	AGTACT	1 cut(s)	819
SchI	GAGTC	1 cut(s)	1563
ScrFI	CCNGG	7 cut(s)	125, 557, 825, 1291, 1521, 1925, 1926
SexAI	ACCWGGT	2 cut(s)	123, 555
SfaNI	GCATC	5 cut(s)	1007, 1192, 1309, 1393, 1710
SfcI	CTRYAG	1 cut(s)	1899
SinI	GGWCC	3 cut(s)	1186, 1337, 1510
SmaI	CCCGGG	1 cut(s)	1926
SmiI	ATTTAAAT	1 cut(s)	1023
SmiMI	CAYNNNNRTG	3 cut(s)	518, 1265, 1812
SphI	GCATGC	1 cut(s)	676
SseBI	AGGCCT	1 cut(s)	1858
SsiI	CCGC	5 cut(s)	154, 736, 742, 1014, 1773
SspI	AATATT	4 cut(s)	220, 664, 1282, 2048
SspMI	CTAG	2 cut(s)	635, 1854
StuI	AGGCCT	1 cut(s)	1858
StyD4I	CCNGG	7 cut(s)	123, 555, 823, 1289, 1519, 1923, 1924
StyI	CCWWGG	3 cut(s)	428, 452, 1207
SwaI	ATTTAAAT	1 cut(s)	1023
TaaI	ACNGT	8 cut(s)	168, 201, 340, 781, 817, 1101, 1315, 1366
TaiI	ACGT	3 cut(s)	813, 1008, 1482
TaqI	TCGA	4 cut(s)	171, 1220, 1718, 1984
TaqII	GACCGA	1 cut(s)	1203
TatI	WGTACW	3 cut(s)	444, 817, 1751
TauI	GCSGC	3 cut(s)	738, 745, 1016
TfiI	GAWTC	5 cut(s)	329, 1148, 1191, 1585, 2012
TscAI	CASTG	2 cut(s)	1104, 1405
TseFI	GTSAC	3 cut(s)	1178, 1211, 1615
TseI	GCWGC	2 cut(s)	1297, 1758
Tsp45I	GTSAC	3 cut(s)	1178, 1211, 1615
TspDTI	ATGAA	9 cut(s)	119, 266, 1380, 1697, 1796, 1822, 1830, 1964, 1986
TspGWI	ACGGA	1 cut(s)	1667
TspMI	CCCGGG	1 cut(s)	1924
TspRI	CASTG	2 cut(s)	1104, 1405
Van91I	CCANNNNNTGG	1 cut(s)	731
VpaK11BI	GGWCC	3 cut(s)	1186, 1337, 1510
VspI	ATTAAT	1 cut(s)	1791
XapI	RAATTY	5 cut(s)	304, 577, 914, 1387, 1829
XceI	RCATGY	4 cut(s)	238, 676, 680, 1264
XmaI	CCCGGG	1 cut(s)	1924
XmiI	GTMKAC	1 cut(s)	539
XmnI	GAANNNNTTC	1 cut(s)	1955
XspI	CTAG	2 cut(s)	635, 1854
ZrmI	AGTACT	1 cut(s)	819
Zsp2I	ATGCAT	1 cut(s)	678

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.