Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000936

Physical Location & Seq

Genomic Coordinates Forward (+)

71986570 .. 71993436

Gene Structure 6867 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00051350.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2025 bp

ATGGATATTACAGAGGTCACACTGATACACCATGTGGGCCTTGTGTTAGCTCTGCTTTGGTTGCTTTCACACTACAATTGCTGCCACGCATTGGCATACTTTCTCTCTCTGATTTATCTCTTTGTGGTACTTTCTGATTCTGAAACAGTGCGTTGGTTGAACCATGCAGTTGACAAGATATGGCCTATATGTATGGAACAGATTGCTTCCCAGAGAATTCTCCTCCCCATCATACCTTGGTTTTTGGAGAAGTACAAACCATGGACTGTTAGTAAAGGTGTAGTTCAGCACCTTTATTTGGGAAGGAACGCACCCATGTTCACAGAGATGAGAGTTCTCCGCCAGTCTACTGGTGATGACCATTTGGTTCTGGAGTTGGGAATGAACTTTCTGACAGCTGATGATATGCTTGGAATACTTGCTGTCAAGCTAAAAAAAAGGCTGGGCTTTGGAATTTGGGCAAAATTGCATATTACCGGTATGCATGTTGAAGGGAAGGTCATGATTGGGGTGAAGTTCCTTCGCAAGTGGCCTTTCCTTGGCCGTGTGCGGTTATGCTTTGTCGAGCCTCCATATTTTCAAATGACCGTCAAGCCTATTTTTACTCGTGGGCTTGATGTTACAGAAGTCCCAGGGATTGATGGATGGCTGGATAAGCTTCTCTCAATTGCCTTTGAGCAGACACTTGTTCAGCCTAATATGCTGGTTGTTGACATGGAGAAATTCACTTCACCGGAACAGGAAAATTGGTTCTCTGTGGATGAGAAGGAGCCTGTTGGGCATCTCAAAGTAGAAGTTATTGAAGCATCTGACATGAAAGCCTCCGACTTAAATGGATTTTCTGACCCTTATGTGAAGGGCCAATTCGGCGTTTACCAATTCAAAACTAAGATACAAAAGAAAACGCTGACCCCAAAATGGTTTGAGGAATTTAGGATCCCGATTATCACATGGGATTCACCTAATGTGCTAGCTATTGAAGTTCATGACAGAGACATTTTTGTTGATGATACCCTTGGAAACTGTTCCATTAACATCGGTGACCTTAGGGATGGTGTGAGACATGACATGTGGTTGCCTCTTCAGAACATTAAAACAGCAGGGAGGCTGCATCTTGCAGTAACTGTACTTGAAGACAATGGGGAGAGCAGTGATCCTCCAGATGTTCGGGAATCGAAAATGCCAAATATGGAAGATAAAAGAAATTCCTTTTCCAGTGAGACTGGTAATAAAAATTCCTTCTCGTCTGTCTCATCTGAGAAATCTCCTAGGGTGGCAGATAATTATGAGCCCATTGATGTTGAAGGGCAAAAAGAAACTGGTATATGGGTCCATCACCCAGGAAGTGAAGTTTCACAAACTTGGGAGGCTAGAAAAGGAAAGGGTCGACGTCTTAGTACCCAAATTCAAGGGGAGCCTAATGGGAGCAGCGTCACTGATGAAACTCAGGATGATAAACATCCAATGCAATCAGTTCGCCGGGGTCTACGTAAACTTGGTTCAGTATTTCAGAAGAATCCCAAAAAGGAGGATAATTCATGCAGTTTTACAGAGTCTGTCCCGAGCCCAGTTACTCCACGTGTCAATCTAAGGGCAATTAATGAAAAGGACATTGCGGTAAAATATGTTGTGGAAGATGAAATTTCTGGTAAAGTTTCAAAAGAAGGGGCTTCAAGTTCTGGAGAGAGTAGCTCAGGTAGCCCAGGAAAGGGCAAGGTGAAAGGCATGGCAAAGAGTTTCTTTAAACATGCTGAAAGATCAGTAAAGCATGCACTTTCACGTAAAGTTGAACTGATTCCAGTTGTCTCCAGGGACATACCTCATCCCCCTGTTAATGATTCGTTCAAGTCAGATGAGCATTTGACTCAGCCACTTCCAAGTGCTCTAAGTAATATTCCAGAGGACACTGAGGATTCAGTGAAGAAGGTTGAACCTGAAGACACAGAAAAGACGCTTGAGAAGCCAGATGACCCTGAAAAAAATAACGAGGGATTGCCTGAGCCGTTAAAAGTTGAAGCTAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0005886 GO:0012505 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00290 ko00650 ko00660 ko00770 ko01100 ko01110 ko01130 ko01210 ko01230 map00290 map00650 map00660 map00770 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

C2 SMP_LBD

Protein Analysis

674

Amino Acids

76.01

Weight (kDa)

5.98

Isoelectric Point (pI)

39.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SMP_MUG190-like	PF25669	150 - 242	2.5e-09	MUG190-like SMP domain
C2	PF00168	260 - 361	2.1e-20	C2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000936)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53590 AT3G14590 AT3G14590 AT3G14590 AT3G14590 AT3G14590
fragaria_vesca	FvH4_3g16980 FvH4_3g16980 FvH4_3g16980 FvH4_3g16980 FvH4_3g16980 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020
malus_domestica	MD00G1185500.v1.1 MD00G1185600.v1.1 MD03G1254200.v1.1 MD03G1254900.v1.1 MD11G1275800.v1.1 MD11G1276000.v1.1
prunus_persica	Prupe.4G152200_v2.0.a1 Prupe.4G152200_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1
pyrus_communis	pycom03g20170 pycom03g20190 pycom11g24400
rosa_chinensis	RchiOBHm_Chr2g0135571 RchiOBHm_Chr2g0159501 RchiOBHm_Chr2g0159511 RchiOBHm_Chr5g0028301 RchiOBHm_Chr5g0028351 RchiOBHm_Chr5g0039631
rosa_laevigata	RLG00000033080 RLG00000033088
rosa_multiflora	Rmu_sc0001020.1_g000001 Rmu_sc0002481.1_g000040 Rmu_sc0008526.1_g000010
rosa_roxburghii	Rroxscaffold_1G00051350 Rroxscaffold_1G00051420 Rroxscaffold_1G00051430
rosa_rugosa	Rorug05G0105600
rosa_samantha	Rh1AG292900 Rh4AG059100 Rh5AG199100 Rh5AG199600 Rh5BG197700 Rh5BG198100 Rh5CG217400 Rh5CG218100 Rh5DG199400 Rh5DG200000 Rh7DG370100
rosa_wichuraiana	Rw4G016870 Rw5G018160 Rw5G018190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1393
AccB7I	CCANNNNNTGG	1 cut(s)	91
AccI	GTMKAC	3 cut(s)	347, 1387, 1486
AciI	CCGC	3 cut(s)	340, 550, 1616
AclWI	GGATC	3 cut(s)	931, 944, 1148
AcoI	YGGCCR	1 cut(s)	541
AcsI	RAATTY	8 cut(s)	216, 453, 722, 929, 1204, 1234, 1404, 1641
AcuI	CTGAAG	2 cut(s)	1067, 1956
AcvI	CACGTG	1 cut(s)	1580
AcyI	GRCGYC	1 cut(s)	1390
AdeI	CACNNNGTG	1 cut(s)	34
AfaI	GTAC	4 cut(s)	129, 254, 1128, 1399
AfiI	CCNNNNNNNGG	6 cut(s)	91, 298, 539, 918, 1708, 1709
AflIII	ACRYGT	2 cut(s)	1068, 1579
AgeI	ACCGGT	1 cut(s)	476
AjnI	CCWGG	4 cut(s)	631, 1339, 1702, 1808
AloI	GAACNNNNNNTCC	2 cut(s)	734, 766
AluBI	AGCT	7 cut(s)	50, 398, 430, 658, 974, 1692, 2018
AluI	AGCT	7 cut(s)	50, 398, 430, 658, 974, 1692, 2018
Alw21I	GWGCWC	1 cut(s)	1885
Alw26I	GTCTC	5 cut(s)	987, 1054, 1214, 1255, 1810
AlwI	GGATC	3 cut(s)	931, 944, 1148
AlwNI	CAGNNNCTG	2 cut(s)	1124, 1556
Ama87I	CYCGRG	1 cut(s)	1561
AoxI	GGCC	5 cut(s)	37, 182, 530, 541, 859
ApeKI	GCWGC	3 cut(s)	81, 1108, 1428
ApoI	RAATTY	8 cut(s)	216, 453, 722, 929, 1204, 1234, 1404, 1641
AseI	ATTAAT	1 cut(s)	1599
AsiGI	ACCGGT	1 cut(s)	476
Asp700I	GAANNNNTTC	2 cut(s)	1024, 1794
AspA2I	CCTAGG	1 cut(s)	1268
AspS9I	GGNCC	3 cut(s)	37, 859, 1330
AsuC2I	CCSGG	1 cut(s)	1481
AsuHPI	GGTGA	7 cut(s)	365, 523, 723, 951, 1052, 1328, 1729
AsuNHI	GCTAGC	1 cut(s)	970
AvaI	CYCGRG	1 cut(s)	1561
AvaII	GGWCC	1 cut(s)	1330
AvrII	CCTAGG	1 cut(s)	1268
AxyI	CCTNAGG	1 cut(s)	1046
BamHI	GGATCC	1 cut(s)	936
BanII	GRGCYC	2 cut(s)	1293, 1568
BauI	CACGAG	1 cut(s)	606
BbrPI	CACGTG	1 cut(s)	1580
BbsI	GAAGAC	2 cut(s)	1140, 1944
Bbv12I	GWGCWC	1 cut(s)	1885
BbvI	GCAGC	3 cut(s)	68, 1095, 1440
BccI	CCATC	5 cut(s)	236, 635, 639, 1046, 1341
BceAI	ACGGC	2 cut(s)	528, 1987
BcgI	CGANNNNNNTGC	2 cut(s)	1457, 1491
BciT130I	CCWGG	4 cut(s)	633, 1341, 1704, 1810
BcnI	CCSGG	1 cut(s)	1481
BcoDI	GTCTC	5 cut(s)	987, 1054, 1214, 1255, 1810
BfaI	CTAG	4 cut(s)	971, 1269, 1371, 2019
BglI	GCCNNNNNGGC	2 cut(s)	778, 867
BisI	GCNGC	3 cut(s)	82, 1109, 1429
BlnI	CCTAGG	1 cut(s)	1268
BlsI	GCNGC	3 cut(s)	83, 1110, 1430
Bme1390I	CCNGG	5 cut(s)	633, 1341, 1481, 1704, 1810
Bme18I	GGWCC	1 cut(s)	1330
BmeT110I	CYCGRG	1 cut(s)	1561
BmgT120I	GGNCC	3 cut(s)	37, 859, 1330
BmiI	GGNNCC	4 cut(s)	771, 938, 1331, 1416
BmrFI	CCNGG	5 cut(s)	633, 1341, 1481, 1704, 1810
BmrI	ACTGGG	1 cut(s)	1562
BmsI	GCATC	3 cut(s)	790, 815, 1120
BmtI	GCTAGC	1 cut(s)	974
BmuI	ACTGGG	1 cut(s)	1562
BpiI	GAAGAC	2 cut(s)	1140, 1944
BplI	GAGNNNNNCTC	2 cut(s)	1676, 1708
BpmI	CTGGAG	4 cut(s)	392, 1143, 1701, 1792
Bpu10I	CCTNAGC	2 cut(s)	1693, 1998
BpuEI	CTTGAG	1 cut(s)	1976
BpuMI	CCSGG	1 cut(s)	1481
BsaAI	YACGTR	3 cut(s)	1490, 1580, 1781
BsaBI	GATNNNNATC	1 cut(s)	1458
BsaHI	GRCGYC	1 cut(s)	1390
BsaWI	WCCGGW	2 cut(s)	476, 733
Bsc4I	CCNNNNNNNGG	6 cut(s)	91, 298, 539, 918, 1708, 1709
Bse118I	RCCGGY	1 cut(s)	476
Bse1I	ACTGG	7 cut(s)	343, 355, 1215, 1228, 1324, 1568, 1799
Bse21I	CCTNAGG	1 cut(s)	1046
Bse3DI	GCAATG	1 cut(s)	1611
Bse8I	GATNNNNATC	1 cut(s)	1458
BseBI	CCWGG	4 cut(s)	633, 1341, 1704, 1810
BseGI	GGATG	6 cut(s)	650, 766, 1057, 1456, 1459, 1822
BseJI	GATNNNNATC	1 cut(s)	1458
BseLI	CCNNNNNNNGG	6 cut(s)	91, 298, 539, 918, 1708, 1709
BseMI	GCAATG	1 cut(s)	1611
BseMII	CTCAG	6 cut(s)	1248, 1460, 1707, 1880, 1899, 1989
BseNI	ACTGG	7 cut(s)	343, 355, 1215, 1228, 1324, 1568, 1799
BseRI	GAGGAG	1 cut(s)	212
BseXI	GCAGC	3 cut(s)	68, 1095, 1440
BseYI	CCCAGC	1 cut(s)	442
BshFI	GGCC	5 cut(s)	39, 184, 532, 543, 861
BshTI	ACCGGT	1 cut(s)	476
BsiHKAI	GWGCWC	1 cut(s)	1885
BsiHKCI	CYCGRG	1 cut(s)	1561
BsiSI	CCGG	3 cut(s)	477, 734, 1480
BslFI	GGGAC	3 cut(s)	614, 1544, 1826
BslI	CCNNNNNNNGG	6 cut(s)	91, 298, 539, 918, 1708, 1709
BsmAI	GTCTC	5 cut(s)	987, 1054, 1214, 1255, 1810
BsmFI	GGGAC	3 cut(s)	614, 1544, 1826
BsnI	GGCC	5 cut(s)	39, 184, 532, 543, 861
BsoBI	CYCGRG	1 cut(s)	1561
Bsp1286I	GDGCHC	3 cut(s)	1293, 1568, 1885
Bsp143I	GATC	3 cut(s)	936, 1153, 1757
Bsp19I	CCATGG	1 cut(s)	260
BspACI	CCGC	3 cut(s)	340, 550, 1616
BspANI	GGCC	5 cut(s)	39, 184, 532, 543, 861
BspCNI	CTCAG	6 cut(s)	1249, 1459, 1706, 1879, 1900, 1990
BspHI	TCATGA	2 cut(s)	501, 985
BspLI	GGNNCC	4 cut(s)	771, 938, 1331, 1416
BspOI	GCTAGC	1 cut(s)	974
BspPI	GGATC	3 cut(s)	931, 944, 1148
BsrDI	GCAATG	1 cut(s)	1611
BsrFI	RCCGGY	1 cut(s)	476
BsrI	ACTGG	7 cut(s)	343, 355, 1215, 1228, 1324, 1568, 1799
BssAI	RCCGGY	1 cut(s)	476
BssMI	GATC	3 cut(s)	936, 1153, 1757
BssNI	GRCGYC	1 cut(s)	1390
BssSI	CACGAG	1 cut(s)	606
BssT1I	CCWWGG	5 cut(s)	236, 260, 538, 1015, 1268
Bst2BI	CACGAG	1 cut(s)	606
Bst2UI	CCWGG	4 cut(s)	633, 1341, 1704, 1810
Bst4CI	ACNGT	5 cut(s)	148, 268, 589, 1025, 1126
Bst6I	CTCTTC	1 cut(s)	1086
BstACI	GRCGYC	1 cut(s)	1390
BstBAI	YACGTR	3 cut(s)	1490, 1580, 1781
BstC8I	GCNNGC	2 cut(s)	972, 1770
BstDSI	CCRYGG	1 cut(s)	260
BstEII	GGTNACC	1 cut(s)	1040
BstF5I	GGATG	6 cut(s)	650, 766, 1057, 1456, 1459, 1822
BstKTI	GATC	3 cut(s)	939, 1156, 1760
BstMAI	GTCTC	5 cut(s)	987, 1054, 1214, 1255, 1810
BstMBI	GATC	3 cut(s)	936, 1153, 1757
BstMWI	GCNNNNNNNGC	7 cut(s)	61, 655, 700, 778, 867, 1698, 1960
BstNI	CCWGG	4 cut(s)	633, 1341, 1704, 1810
BstNSI	RCATGY	4 cut(s)	488, 1072, 1751, 1772
BstPI	GGTNACC	1 cut(s)	1040
BstSCI	CCNGG	5 cut(s)	631, 1339, 1479, 1702, 1808
BstSNI	TACGTA	1 cut(s)	1490
BstV1I	GCAGC	3 cut(s)	68, 1095, 1440
BstV2I	GAAGAC	2 cut(s)	1140, 1944
BstX2I	RGATCY	1 cut(s)	936
BstXI	CCANNNNNNTGG	1 cut(s)	350
BstYI	RGATCY	1 cut(s)	936
Bsu36I	CCTNAGG	1 cut(s)	1046
BsuRI	GGCC	5 cut(s)	39, 184, 532, 543, 861
BtgI	CCRYGG	1 cut(s)	260
BtsCI	GGATG	6 cut(s)	650, 766, 1057, 1456, 1459, 1822
BtsI	GCAGTG	1 cut(s)	1156
BtsIMutI	CAGTG	7 cut(s)	20, 153, 1156, 1222, 1434, 1905, 1923
Cac8I	GCNNGC	2 cut(s)	972, 1770
CaiI	CAGNNNCTG	2 cut(s)	1124, 1556
CciI	TCATGA	2 cut(s)	501, 985
Cfr10I	RCCGGY	1 cut(s)	476
Cfr13I	GGNCC	3 cut(s)	37, 859, 1330
CseI	GACGC	2 cut(s)	1420, 1960
Csp6I	GTAC	4 cut(s)	128, 253, 1127, 1398
CspAI	ACCGGT	1 cut(s)	476
CviQI	GTAC	4 cut(s)	128, 253, 1127, 1398
DpnI	GATC	3 cut(s)	938, 1155, 1759
DpnII	GATC	3 cut(s)	936, 1153, 1757
DraI	TTTAAA	1 cut(s)	1744
DraIII	CACNNNGTG	1 cut(s)	34
EaeI	YGGCCR	1 cut(s)	541
Eam1104I	CTCTTC	1 cut(s)	1086
EarI	CTCTTC	1 cut(s)	1086
EciI	GGCGGA	1 cut(s)	329
Eco105I	TACGTA	1 cut(s)	1490
Eco130I	CCWWGG	5 cut(s)	236, 260, 538, 1015, 1268
Eco24I	GRGCYC	2 cut(s)	1293, 1568
Eco47I	GGWCC	1 cut(s)	1330
Eco57I	CTGAAG	2 cut(s)	1067, 1956
Eco72I	CACGTG	1 cut(s)	1580
Eco81I	CCTNAGG	1 cut(s)	1046
Eco88I	CYCGRG	1 cut(s)	1561
Eco91I	GGTNACC	1 cut(s)	1040
EcoO65I	GGTNACC	1 cut(s)	1040
EcoRI	GAATTC	1 cut(s)	216
EcoRII	CCWGG	4 cut(s)	631, 1339, 1702, 1808
EcoT14I	CCWWGG	5 cut(s)	236, 260, 538, 1015, 1268
EcoT22I	ATGCAT	1 cut(s)	486
EcoT38I	GRGCYC	2 cut(s)	1293, 1568
ErhI	CCWWGG	5 cut(s)	236, 260, 538, 1015, 1268
FalI	AAGNNNNNCTT	2 cut(s)	1724, 1756
FaqI	GGGAC	3 cut(s)	614, 1544, 1826
FblI	GTMKAC	3 cut(s)	347, 1387, 1486
Fnu4HI	GCNGC	3 cut(s)	82, 1109, 1429
FokI	GGATG	6 cut(s)	657, 773, 1064, 1446, 1463, 1809
FriOI	GRGCYC	2 cut(s)	1293, 1568
Fsp4HI	GCNGC	3 cut(s)	82, 1109, 1429
FspBI	CTAG	4 cut(s)	971, 1269, 1371, 2019
GluI	GCNGC	3 cut(s)	82, 1109, 1429
GsaI	CCCAGC	1 cut(s)	446
GsuI	CTGGAG	4 cut(s)	392, 1143, 1701, 1792
HaeIII	GGCC	5 cut(s)	39, 184, 532, 543, 861
HapII	CCGG	3 cut(s)	477, 734, 1480
HgaI	GACGC	2 cut(s)	1420, 1960
Hin1I	GRCGYC	1 cut(s)	1390
HincII	GTYRAC	3 cut(s)	172, 712, 1388
HindII	GTYRAC	3 cut(s)	172, 712, 1388
HindIII	AAGCTT	1 cut(s)	656
HinfI	GANTC	9 cut(s)	137, 956, 1172, 1516, 1553, 1795, 1838, 1864, 1913
HpaII	CCGG	3 cut(s)	477, 734, 1480
HphI	GGTGA	7 cut(s)	365, 523, 723, 951, 1052, 1328, 1729
Hpy166II	GTNNAC	8 cut(s)	172, 321, 348, 712, 874, 1388, 1487, 1493
Hpy8I	GTNNAC	8 cut(s)	172, 321, 348, 712, 874, 1388, 1487, 1493
Hpy99I	CGWCG	1 cut(s)	1392
HpyCH4III	ACNGT	5 cut(s)	148, 268, 589, 1025, 1126
HpyCH4IV	ACGT	4 cut(s)	1390, 1489, 1579, 1780
HpyCH4V	TGCA	8 cut(s)	167, 469, 484, 1111, 1118, 1468, 1542, 1772
HpyF10VI	GCNNNNNNNGC	7 cut(s)	61, 655, 700, 778, 867, 1698, 1960
HpySE526I	ACGT	4 cut(s)	1390, 1489, 1579, 1780
Hsp92I	GRCGYC	1 cut(s)	1390
Kzo9I	GATC	3 cut(s)	936, 1153, 1757
LmnI	GCTCC	3 cut(s)	769, 1414, 1425
Lsp1109I	GCAGC	3 cut(s)	68, 1095, 1440
LweI	GCATC	3 cut(s)	790, 815, 1120
MaeI	CTAG	4 cut(s)	971, 1269, 1371, 2019
MaeII	ACGT	4 cut(s)	1390, 1489, 1579, 1780
MaeIII	GTNAC	6 cut(s)	16, 619, 1040, 1120, 1432, 1570
MalI	GATC	3 cut(s)	938, 1155, 1759
MboI	GATC	3 cut(s)	936, 1153, 1757
MboII	GAAGA	7 cut(s)	1073, 1145, 1205, 1525, 1646, 1933, 1949
MfeI	CAATTG	2 cut(s)	76, 666
MflI	RGATCY	1 cut(s)	936
MhlI	GDGCHC	3 cut(s)	1293, 1568, 1885
MlyI	GAGTC	2 cut(s)	1562, 1858
MmeI	TCCRAC	1 cut(s)	849
Mph1103I	ATGCAT	1 cut(s)	486
MroXI	GAANNNNTTC	2 cut(s)	1024, 1794
MseI	TTAA	7 cut(s)	830, 1032, 1092, 1599, 1743, 1833, 2006
MslI	CAYNNNNRTG	1 cut(s)	326
MspA1I	CMGCKG	1 cut(s)	398
MspI	CCGG	3 cut(s)	477, 734, 1480
MspR9I	CCNGG	5 cut(s)	633, 1341, 1481, 1704, 1810
MunI	CAATTG	2 cut(s)	76, 666
MvaI	CCWGG	4 cut(s)	633, 1341, 1704, 1810
MwoI	GCNNNNNNNGC	7 cut(s)	61, 655, 700, 778, 867, 1698, 1960
NciI	CCSGG	1 cut(s)	1481
NcoI	CCATGG	1 cut(s)	260
NdeII	GATC	3 cut(s)	936, 1153, 1757
NheI	GCTAGC	1 cut(s)	970
NlaIV	GGNNCC	4 cut(s)	771, 938, 1331, 1416
NmuCI	GTSAC	3 cut(s)	16, 1040, 1432
NsiI	ATGCAT	1 cut(s)	486
NspI	RCATGY	4 cut(s)	488, 1072, 1751, 1772
PaeI	GCATGC	1 cut(s)	1772
PagI	TCATGA	2 cut(s)	501, 985
PasI	CCCWGGG	1 cut(s)	632
PciI	ACATGT	1 cut(s)	1068
PdmI	GAANNNNTTC	2 cut(s)	1024, 1794
PfeI	GAWTC	7 cut(s)	137, 956, 1172, 1516, 1795, 1838, 1913
PflMI	CCANNNNNTGG	1 cut(s)	91
PinAI	ACCGGT	1 cut(s)	476
PkrI	GCNGC	3 cut(s)	83, 1110, 1430
PleI	GAGTC	2 cut(s)	1561, 1858
PmaCI	CACGTG	1 cut(s)	1580
PmlI	CACGTG	1 cut(s)	1580
PpsI	GAGTC	2 cut(s)	1561, 1858
Ppu21I	YACGTR	3 cut(s)	1490, 1580, 1781
PscI	ACATGT	1 cut(s)	1068
PshBI	ATTAAT	1 cut(s)	1599
Psp6I	CCWGG	4 cut(s)	631, 1339, 1702, 1808
PspCI	CACGTG	1 cut(s)	1580
PspEI	GGTNACC	1 cut(s)	1040
PspFI	CCCAGC	1 cut(s)	442
PspGI	CCWGG	4 cut(s)	631, 1339, 1702, 1808
PspN4I	GGNNCC	4 cut(s)	771, 938, 1331, 1416
PspPI	GGNCC	3 cut(s)	37, 859, 1330
PsrI	GAACNNNNNNTAC	2 cut(s)	1483, 1515
PstNI	CAGNNNCTG	2 cut(s)	1124, 1556
PsuI	RGATCY	1 cut(s)	936
PvuII	CAGCTG	1 cut(s)	398
RsaI	GTAC	4 cut(s)	129, 254, 1128, 1399
RsaNI	GTAC	4 cut(s)	128, 253, 1127, 1398
RseI	CAYNNNNRTG	1 cut(s)	326
SalI	GTCGAC	1 cut(s)	1386
SaqAI	TTAA	7 cut(s)	830, 1032, 1092, 1599, 1743, 1833, 2006
SatI	GCNGC	3 cut(s)	82, 1109, 1429
Sau3AI	GATC	3 cut(s)	936, 1153, 1757
Sau96I	GGNCC	3 cut(s)	37, 859, 1330
SchI	GAGTC	2 cut(s)	1562, 1858
ScrFI	CCNGG	5 cut(s)	633, 1341, 1481, 1704, 1810
SduI	GDGCHC	3 cut(s)	1293, 1568, 1885
SfaNI	GCATC	3 cut(s)	790, 815, 1120
SinI	GGWCC	1 cut(s)	1330
SmiMI	CAYNNNNRTG	1 cut(s)	326
SmlI	CTYRAG	1 cut(s)	1955
SmoI	CTYRAG	1 cut(s)	1955
SnaBI	TACGTA	1 cut(s)	1490
SphI	GCATGC	1 cut(s)	1772
SsiI	CCGC	3 cut(s)	340, 550, 1616
SspI	AATATT	1 cut(s)	1894
SspMI	CTAG	4 cut(s)	971, 1269, 1371, 2019
StyD4I	CCNGG	5 cut(s)	631, 1339, 1479, 1702, 1808
StyI	CCWWGG	5 cut(s)	236, 260, 538, 1015, 1268
TaaI	ACNGT	5 cut(s)	148, 268, 589, 1025, 1126
TaiI	ACGT	4 cut(s)	1393, 1492, 1582, 1783
TaqI	TCGA	3 cut(s)	564, 1175, 1387
TatI	WGTACW	2 cut(s)	252, 1126
TfiI	GAWTC	7 cut(s)	137, 956, 1172, 1516, 1795, 1838, 1913
Tru1I	TTAA	7 cut(s)	830, 1032, 1092, 1599, 1743, 1833, 2006
Tru9I	TTAA	7 cut(s)	830, 1032, 1092, 1599, 1743, 1833, 2006
TscAI	CASTG	7 cut(s)	27, 153, 1156, 1222, 1441, 1912, 1923
TseFI	GTSAC	3 cut(s)	16, 1040, 1432
TseI	GCWGC	3 cut(s)	81, 1108, 1428
Tsp45I	GTSAC	3 cut(s)	16, 1040, 1432
TspDTI	ATGAA	7 cut(s)	398, 830, 974, 1455, 1527, 1617, 1653
TspRI	CASTG	7 cut(s)	27, 153, 1156, 1222, 1441, 1912, 1923
Van91I	CCANNNNNTGG	1 cut(s)	91
VpaK11BI	GGWCC	1 cut(s)	1330
VspI	ATTAAT	1 cut(s)	1599
XapI	RAATTY	8 cut(s)	216, 453, 722, 929, 1204, 1234, 1404, 1641
XceI	RCATGY	4 cut(s)	488, 1072, 1751, 1772
XmaJI	CCTAGG	1 cut(s)	1268
XmiI	GTMKAC	3 cut(s)	347, 1387, 1486
XmnI	GAANNNNTTC	2 cut(s)	1024, 1794
XspI	CTAG	4 cut(s)	971, 1269, 1371, 2019
ZraI	GACGTC	1 cut(s)	1391
Zsp2I	ATGCAT	1 cut(s)	486

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.