Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0000936

Physical Location & Seq

Genomic Coordinates Reverse (-)

22169517 .. 22177881

Gene Structure 8365 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG218100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2046 bp

ATGCGACTGCGGAAAAAACTACAATTCGAGGAAAGAAAGCAGGGGAATCAGAGAAGGGTACTTTCTGATTCTGAAACAGTGCGTTGGTTGAACCATGCAGTTGAAAAGATATGGCCTATATGTATGGAACAGATTGCTTCCCAGAGAGTTCTGCTCCCCATCATACCTTGGTTTTTGGAGAAGTACAAACCATGGACTGTTAGTAAAGGTGTAGTTCAGCACCTTTATTTGGGAAGGAATGCACCCATGTTCACAGAGATGAGAGTTCTCCGCCAGTCTACTGGTGATGACCATTTGGTTCTGGAGTTGGGAATGAATTTTCTGACAGCAGATGATATGCTTGGAATACTTGCTGTCAAGCTAAAAAAAAGGCTGGGCTTTGGAATTTGGGCAAAATTGCATATTACCGGTATGCATGTTGAAGGGAAGGTCATGATTGGGGTGAAGTTCCTTCGCAAGTGGCCTTTCCTTGGCCGTGTGCGGTTATGCTTTGTCGAGCCTCCATATTTTCAAATGACCGTTAAGCCTATTTTTACTCGTGGGCTTGATGTTACAGAAGTCCCAGGGATTGATGGATGGCTGGATAAGCTTCTCTCAATTGCCTTTGAGCAGACACTTGTTCAGCCTAATATGCTGGTTGTTGACATGGAAAAATTCACTTCACCGGAACAGGAAAATTGGTTCTCTGTGGATGAGAAGGAGCCTGTTGGGCATCTCAAAGTAGAAGTTATTGAAGCATCTGACATGAAAGCCTCCGACTTAAATGGATTTTCTGACCCTTATGTGAAGGGCCAATTCGGCGTTTACCAATTCAAAACTAAGATACAAAAGAAAACGCTGACCCCAAAATGGTTTGAGGAATTTAAGATCCCGATTATTACATGGGATTCACCTAATGTGCTAGCTATTGAAGTTCATGACAGAGACATTTTTGTTGATGATACCCTTGGAAACTGTTCCATTAACATCGGTGACCTTAGGGATGGTGTGAGACATGACATGTGGTTGCCTCTTCAGAACATCAAAACAGCAGGGAGGCTGCATCTTGCAATAACTGTACTTGAAGACAATGGGGAGAGCAGTGATCCTCCAGATGTTCGGGAATCGAAAATGCCAAATATGGAAGATAAAAGAAATTCCTTTTCCAGTGAGACTGCTAATAAAAATTCCTTCTCGTCTGTCTCATCTGAGAAATCTCCTAGGGTGGCAGATAATTATGAGCCCATTGATGTTGAAGGGCAAAAAGAAACTGGTATATGGGTCCATCACCCAGGAAGTGAAGTTTCACAAACTTGGGAGGCTAGAAAAGGAAAGGGTCGACGTCTTAGTACCCAAATTCAAGGGGAGCCTAATGGGAGCAGCGTCACTGATGAAACTCAGGATGATAAACATCCAATGCAATCAGTTCGCCGGGGTCTACGTAAACTTGGTTCAGTATTTCAGAAGAATCCCAAAAAGGAGGATAATTCATGCAGTTTTACAGAGCCTGTCCAGAGCCCAGTTACTCCACGTGTCAATCTTAGGGCAATTAATGAAAAGGACATTGCGGTAAAATATGTTGTGGAAGATGAAATTTCTGGTAAAGTTTCAAAAGAAGGGGCTTCAAGTTCTGGAGAGAGTAGCTCAGGTAGCCCAGGAAAGGGCAAGGTGAAAGGCATGGCAAAGAGTTTCTTTAAACATGCTGAAAGATCGGTAAAGCATGCACTTTCACGTAAAGGTTCTAGAAAGTCACAGACGTCACAGACAGATTCTTGTGAAAGAGAAATTATAGAAGGTTCGGACTCTTCTGACGATGATGATACTCCTCCCTCCCCAATAGTTGAAATGATACCAGTTGTCTCCAGGGACATACCTCATCCCCCTGTTAATGATTCGTTCAAGTCAGATGAGCATTTGACTCAGCTGCATGCAAGTGCTCTAAGTAACATTCCAGAGGACACTGAGGATTCAGTGAAGACGGTTGAACCTGAAGACACGCTTGAGAAGCCGGATGACCCTGAAAAAAATGAGGGATTGCCTGAGCCGTTAAAAGTTGAAGCTAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0005886 GO:0012505 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00290 ko00650 ko00660 ko00770 ko01100 ko01110 ko01130 ko01210 ko01230 map00290 map00650 map00660 map00770 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

C2 SMP_LBD

Protein Analysis

681

Amino Acids

76.85

Weight (kDa)

5.95

Isoelectric Point (pI)

42.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SMP_MUG190-like	PF25669	127 - 219	2.5e-09	MUG190-like SMP domain
C2	PF00168	237 - 338	1.6e-20	C2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000936)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53590 AT3G14590 AT3G14590 AT3G14590 AT3G14590 AT3G14590
fragaria_vesca	FvH4_3g16980 FvH4_3g16980 FvH4_3g16980 FvH4_3g16980 FvH4_3g16980 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020
malus_domestica	MD00G1185500.v1.1 MD00G1185600.v1.1 MD03G1254200.v1.1 MD03G1254900.v1.1 MD11G1275800.v1.1 MD11G1276000.v1.1
prunus_persica	Prupe.4G152200_v2.0.a1 Prupe.4G152200_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1
pyrus_communis	pycom03g20170 pycom03g20190 pycom11g24400
rosa_chinensis	RchiOBHm_Chr2g0135571 RchiOBHm_Chr2g0159501 RchiOBHm_Chr2g0159511 RchiOBHm_Chr5g0028301 RchiOBHm_Chr5g0028351 RchiOBHm_Chr5g0039631
rosa_laevigata	RLG00000033080 RLG00000033088
rosa_multiflora	Rmu_sc0001020.1_g000001 Rmu_sc0002481.1_g000040 Rmu_sc0008526.1_g000010
rosa_roxburghii	Rroxscaffold_1G00051350 Rroxscaffold_1G00051420 Rroxscaffold_1G00051430
rosa_rugosa	Rorug05G0105600
rosa_samantha	Rh1AG292900 Rh4AG059100 Rh5AG199100 Rh5AG199600 Rh5BG197700 Rh5BG198100 Rh5CG217400 Rh5CG218100 Rh5DG199400 Rh5DG200000 Rh7DG370100
rosa_wichuraiana	Rw4G016870 Rw5G018160 Rw5G018190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	1324, 1739
AccI	GTMKAC	3 cut(s)	278, 1318, 1417
AciI	CCGC	4 cut(s)	10, 271, 481, 1547
AclWI	GGATC	2 cut(s)	862, 1079
AcoI	YGGCCR	1 cut(s)	472
AcsI	RAATTY	8 cut(s)	316, 384, 653, 860, 1135, 1165, 1335, 1572
AcuI	CTGAAG	2 cut(s)	998, 1989
AcvI	CACGTG	1 cut(s)	1511
AcyI	GRCGYC	2 cut(s)	1321, 1736
AfaI	GTAC	4 cut(s)	60, 185, 1059, 1330
AfiI	CCNNNNNNNGG	5 cut(s)	229, 470, 849, 1639, 1640
AflIII	ACRYGT	2 cut(s)	999, 1510
AgeI	ACCGGT	1 cut(s)	407
AjnI	CCWGG	4 cut(s)	562, 1270, 1633, 1841
AloI	GAACNNNNNNTCC	2 cut(s)	665, 697
AluBI	AGCT	6 cut(s)	361, 589, 905, 1623, 1903, 2039
AluI	AGCT	6 cut(s)	361, 589, 905, 1623, 1903, 2039
Alw21I	GWGCWC	1 cut(s)	1918
Alw26I	GTCTC	5 cut(s)	918, 985, 1145, 1186, 1843
AlwI	GGATC	2 cut(s)	862, 1079
AlwNI	CAGNNNCTG	1 cut(s)	1487
AoxI	GGCC	4 cut(s)	113, 461, 472, 790
ApeKI	GCWGC	3 cut(s)	1039, 1359, 1903
ApoI	RAATTY	8 cut(s)	316, 384, 653, 860, 1135, 1165, 1335, 1572
AseI	ATTAAT	1 cut(s)	1530
AsiGI	ACCGGT	1 cut(s)	407
Asp700I	GAANNNNTTC	1 cut(s)	955
AspA2I	CCTAGG	1 cut(s)	1199
AspS9I	GGNCC	2 cut(s)	790, 1261
AsuC2I	CCSGG	1 cut(s)	1412
AsuHPI	GGTGA	7 cut(s)	296, 454, 654, 882, 983, 1259, 1660
AsuNHI	GCTAGC	1 cut(s)	901
AvaII	GGWCC	1 cut(s)	1261
AvrII	CCTAGG	1 cut(s)	1199
AxyI	CCTNAGG	1 cut(s)	977
BanII	GRGCYC	2 cut(s)	1224, 1499
BauI	CACGAG	1 cut(s)	537
BbrPI	CACGTG	1 cut(s)	1511
BbsI	GAAGAC	3 cut(s)	1071, 1961, 1977
Bbv12I	GWGCWC	1 cut(s)	1918
BbvI	GCAGC	3 cut(s)	1026, 1371, 1890
BccI	CCATC	5 cut(s)	167, 566, 570, 977, 1272
BceAI	ACGGC	2 cut(s)	459, 2008
BcgI	CGANNNNNNTGC	2 cut(s)	1388, 1422
BciT130I	CCWGG	4 cut(s)	564, 1272, 1635, 1843
BcnI	CCSGG	1 cut(s)	1412
BcoDI	GTCTC	5 cut(s)	918, 985, 1145, 1186, 1843
BfaI	CTAG	5 cut(s)	902, 1200, 1302, 1722, 2040
BglI	GCCNNNNNGGC	2 cut(s)	709, 798
BisI	GCNGC	3 cut(s)	1040, 1360, 1904
BlnI	CCTAGG	1 cut(s)	1199
BlsI	GCNGC	3 cut(s)	1041, 1361, 1905
Bme1390I	CCNGG	5 cut(s)	564, 1272, 1412, 1635, 1843
Bme18I	GGWCC	1 cut(s)	1261
BmgT120I	GGNCC	2 cut(s)	790, 1261
BmiI	GGNNCC	3 cut(s)	702, 1262, 1347
BmrFI	CCNGG	5 cut(s)	564, 1272, 1412, 1635, 1843
BmrI	ACTGGG	1 cut(s)	1493
BmsI	GCATC	3 cut(s)	721, 746, 1051
BmtI	GCTAGC	1 cut(s)	905
BmuI	ACTGGG	1 cut(s)	1493
BpiI	GAAGAC	3 cut(s)	1071, 1961, 1977
BplI	GAGNNNNNCTC	4 cut(s)	138, 170, 1607, 1639
BpmI	CTGGAG	4 cut(s)	323, 1074, 1632, 1825
Bpu10I	CCTNAGC	2 cut(s)	1624, 2019
BpuEI	CTTGAG	1 cut(s)	2000
BpuMI	CCSGG	1 cut(s)	1412
BsaAI	YACGTR	3 cut(s)	1421, 1511, 1712
BsaBI	GATNNNNATC	1 cut(s)	1389
BsaHI	GRCGYC	2 cut(s)	1321, 1736
BsaWI	WCCGGW	2 cut(s)	407, 664
Bsc4I	CCNNNNNNNGG	5 cut(s)	229, 470, 849, 1639, 1640
Bse118I	RCCGGY	1 cut(s)	407
Bse1I	ACTGG	6 cut(s)	274, 286, 1146, 1255, 1499, 1832
Bse21I	CCTNAGG	1 cut(s)	977
Bse3DI	GCAATG	1 cut(s)	1542
Bse8I	GATNNNNATC	1 cut(s)	1389
BseBI	CCWGG	4 cut(s)	564, 1272, 1635, 1843
BseGI	GGATG	7 cut(s)	581, 697, 988, 1387, 1390, 1855, 1996
BseJI	GATNNNNATC	1 cut(s)	1389
BseLI	CCNNNNNNNGG	5 cut(s)	229, 470, 849, 1639, 1640
BseMI	GCAATG	1 cut(s)	1542
BseMII	CTCAG	6 cut(s)	1179, 1391, 1638, 1913, 1932, 2010
BseNI	ACTGG	6 cut(s)	274, 286, 1146, 1255, 1499, 1832
BseRI	GAGGAG	1 cut(s)	1794
BseXI	GCAGC	3 cut(s)	1026, 1371, 1890
BseYI	CCCAGC	1 cut(s)	373
BshFI	GGCC	4 cut(s)	115, 463, 474, 792
BshTI	ACCGGT	1 cut(s)	407
BsiHKAI	GWGCWC	1 cut(s)	1918
BsiSI	CCGG	4 cut(s)	408, 665, 1411, 1988
BslFI	GGGAC	2 cut(s)	545, 1859
BslI	CCNNNNNNNGG	5 cut(s)	229, 470, 849, 1639, 1640
BsmAI	GTCTC	5 cut(s)	918, 985, 1145, 1186, 1843
BsmFI	GGGAC	2 cut(s)	545, 1859
BsmI	GAATGC	1 cut(s)	244
BsnI	GGCC	4 cut(s)	115, 463, 474, 792
Bsp1286I	GDGCHC	3 cut(s)	1224, 1499, 1918
Bsp143I	GATC	3 cut(s)	867, 1084, 1688
Bsp19I	CCATGG	1 cut(s)	191
BspACI	CCGC	4 cut(s)	10, 271, 481, 1547
BspANI	GGCC	4 cut(s)	115, 463, 474, 792
BspCNI	CTCAG	6 cut(s)	1180, 1390, 1637, 1912, 1933, 2011
BspHI	TCATGA	2 cut(s)	432, 916
BspLI	GGNNCC	3 cut(s)	702, 1262, 1347
BspOI	GCTAGC	1 cut(s)	905
BspPI	GGATC	2 cut(s)	862, 1079
BsrDI	GCAATG	1 cut(s)	1542
BsrFI	RCCGGY	1 cut(s)	407
BsrI	ACTGG	6 cut(s)	274, 286, 1146, 1255, 1499, 1832
BssAI	RCCGGY	1 cut(s)	407
BssMI	GATC	3 cut(s)	867, 1084, 1688
BssNI	GRCGYC	2 cut(s)	1321, 1736
BssSI	CACGAG	1 cut(s)	537
BssT1I	CCWWGG	5 cut(s)	167, 191, 469, 946, 1199
Bst2BI	CACGAG	1 cut(s)	537
Bst2UI	CCWGG	4 cut(s)	564, 1272, 1635, 1843
Bst4CI	ACNGT	6 cut(s)	79, 199, 520, 956, 1057, 1960
Bst6I	CTCTTC	2 cut(s)	1017, 1789
BstACI	GRCGYC	2 cut(s)	1321, 1736
BstBAI	YACGTR	3 cut(s)	1421, 1511, 1712
BstC8I	GCNNGC	3 cut(s)	903, 1701, 1908
BstDSI	CCRYGG	1 cut(s)	191
BstEII	GGTNACC	1 cut(s)	971
BstF5I	GGATG	7 cut(s)	581, 697, 988, 1387, 1390, 1855, 1996
BstKTI	GATC	3 cut(s)	870, 1087, 1691
BstMAI	GTCTC	5 cut(s)	918, 985, 1145, 1186, 1843
BstMBI	GATC	3 cut(s)	867, 1084, 1688
BstMWI	GCNNNNNNNGC	6 cut(s)	586, 631, 709, 798, 1629, 1984
BstNI	CCWGG	4 cut(s)	564, 1272, 1635, 1843
BstNSI	RCATGY	5 cut(s)	419, 1003, 1682, 1703, 1910
BstPI	GGTNACC	1 cut(s)	971
BstSCI	CCNGG	5 cut(s)	562, 1270, 1410, 1633, 1841
BstSNI	TACGTA	1 cut(s)	1421
BstV1I	GCAGC	3 cut(s)	1026, 1371, 1890
BstV2I	GAAGAC	3 cut(s)	1071, 1961, 1977
BstX2I	RGATCY	1 cut(s)	867
BstXI	CCANNNNNNTGG	1 cut(s)	281
BstYI	RGATCY	1 cut(s)	867
Bsu36I	CCTNAGG	1 cut(s)	977
BsuRI	GGCC	4 cut(s)	115, 463, 474, 792
BtgI	CCRYGG	1 cut(s)	191
BtsCI	GGATG	7 cut(s)	581, 697, 988, 1387, 1390, 1855, 1996
BtsI	GCAGTG	1 cut(s)	1087
BtsIMutI	CAGTG	6 cut(s)	84, 1087, 1153, 1365, 1938, 1956
Cac8I	GCNNGC	3 cut(s)	903, 1701, 1908
CaiI	CAGNNNCTG	1 cut(s)	1487
CciI	TCATGA	2 cut(s)	432, 916
Cfr10I	RCCGGY	1 cut(s)	407
Cfr13I	GGNCC	2 cut(s)	790, 1261
CseI	GACGC	1 cut(s)	1351
Csp6I	GTAC	4 cut(s)	59, 184, 1058, 1329
CspAI	ACCGGT	1 cut(s)	407
CviQI	GTAC	4 cut(s)	59, 184, 1058, 1329
DpnI	GATC	3 cut(s)	869, 1086, 1690
DpnII	GATC	3 cut(s)	867, 1084, 1688
DraI	TTTAAA	1 cut(s)	1675
EaeI	YGGCCR	1 cut(s)	472
Eam1104I	CTCTTC	2 cut(s)	1017, 1789
EarI	CTCTTC	2 cut(s)	1017, 1789
EciI	GGCGGA	1 cut(s)	260
Eco105I	TACGTA	1 cut(s)	1421
Eco130I	CCWWGG	5 cut(s)	167, 191, 469, 946, 1199
Eco24I	GRGCYC	2 cut(s)	1224, 1499
Eco47I	GGWCC	1 cut(s)	1261
Eco57I	CTGAAG	2 cut(s)	998, 1989
Eco72I	CACGTG	1 cut(s)	1511
Eco81I	CCTNAGG	1 cut(s)	977
Eco91I	GGTNACC	1 cut(s)	971
EcoO65I	GGTNACC	1 cut(s)	971
EcoRII	CCWGG	4 cut(s)	562, 1270, 1633, 1841
EcoT14I	CCWWGG	5 cut(s)	167, 191, 469, 946, 1199
EcoT22I	ATGCAT	1 cut(s)	417
EcoT38I	GRGCYC	2 cut(s)	1224, 1499
ErhI	CCWWGG	5 cut(s)	167, 191, 469, 946, 1199
FalI	AAGNNNNNCTT	4 cut(s)	1655, 1687, 1962, 1994
FaqI	GGGAC	2 cut(s)	545, 1859
FblI	GTMKAC	3 cut(s)	278, 1318, 1417
Fnu4HI	GCNGC	3 cut(s)	1040, 1360, 1904
FokI	GGATG	7 cut(s)	588, 704, 995, 1377, 1394, 1842, 2003
FriOI	GRGCYC	2 cut(s)	1224, 1499
Fsp4HI	GCNGC	3 cut(s)	1040, 1360, 1904
FspBI	CTAG	5 cut(s)	902, 1200, 1302, 1722, 2040
GluI	GCNGC	3 cut(s)	1040, 1360, 1904
GsaI	CCCAGC	1 cut(s)	377
GsuI	CTGGAG	4 cut(s)	323, 1074, 1632, 1825
HaeIII	GGCC	4 cut(s)	115, 463, 474, 792
HapII	CCGG	4 cut(s)	408, 665, 1411, 1988
HgaI	GACGC	1 cut(s)	1351
Hin1I	GRCGYC	2 cut(s)	1321, 1736
HincII	GTYRAC	2 cut(s)	643, 1319
HindII	GTYRAC	2 cut(s)	643, 1319
HindIII	AAGCTT	1 cut(s)	587
HpaII	CCGG	4 cut(s)	408, 665, 1411, 1988
HphI	GGTGA	7 cut(s)	296, 454, 654, 882, 983, 1259, 1660
Hpy166II	GTNNAC	7 cut(s)	252, 279, 643, 805, 1319, 1418, 1424
Hpy8I	GTNNAC	7 cut(s)	252, 279, 643, 805, 1319, 1418, 1424
Hpy99I	CGWCG	1 cut(s)	1323
HpyCH4III	ACNGT	6 cut(s)	79, 199, 520, 956, 1057, 1960
HpyCH4IV	ACGT	5 cut(s)	1321, 1420, 1510, 1711, 1736
HpyF10VI	GCNNNNNNNGC	6 cut(s)	586, 631, 709, 798, 1629, 1984
HpySE526I	ACGT	5 cut(s)	1321, 1420, 1510, 1711, 1736
Hsp92I	GRCGYC	2 cut(s)	1321, 1736
Kzo9I	GATC	3 cut(s)	867, 1084, 1688
LmnI	GCTCC	4 cut(s)	159, 700, 1345, 1356
Lsp1109I	GCAGC	3 cut(s)	1026, 1371, 1890
LweI	GCATC	3 cut(s)	721, 746, 1051
MaeI	CTAG	5 cut(s)	902, 1200, 1302, 1722, 2040
MaeII	ACGT	5 cut(s)	1321, 1420, 1510, 1711, 1736
MaeIII	GTNAC	7 cut(s)	550, 971, 1363, 1501, 1728, 1737, 1922
MalI	GATC	3 cut(s)	869, 1086, 1690
MboI	GATC	3 cut(s)	867, 1084, 1688
MboII	GAAGA	8 cut(s)	1004, 1076, 1136, 1456, 1577, 1776, 1966, 1982
MfeI	CAATTG	1 cut(s)	597
MflI	RGATCY	1 cut(s)	867
MhlI	GDGCHC	3 cut(s)	1224, 1499, 1918
MlyI	GAGTC	2 cut(s)	1775, 1891
MmeI	TCCRAC	1 cut(s)	780
Mph1103I	ATGCAT	1 cut(s)	417
MroXI	GAANNNNTTC	1 cut(s)	955
MseI	TTAA	8 cut(s)	522, 761, 864, 963, 1530, 1674, 1866, 2027
MslI	CAYNNNNRTG	2 cut(s)	257, 1911
MspA1I	CMGCKG	1 cut(s)	1903
MspI	CCGG	4 cut(s)	408, 665, 1411, 1988
MspR9I	CCNGG	5 cut(s)	564, 1272, 1412, 1635, 1843
MunI	CAATTG	1 cut(s)	597
Mva1269I	GAATGC	1 cut(s)	244
MvaI	CCWGG	4 cut(s)	564, 1272, 1635, 1843
MwoI	GCNNNNNNNGC	6 cut(s)	586, 631, 709, 798, 1629, 1984
NciI	CCSGG	1 cut(s)	1412
NcoI	CCATGG	1 cut(s)	191
NdeII	GATC	3 cut(s)	867, 1084, 1688
NheI	GCTAGC	1 cut(s)	901
NlaIV	GGNNCC	3 cut(s)	702, 1262, 1347
NmuCI	GTSAC	4 cut(s)	971, 1363, 1728, 1737
NsiI	ATGCAT	1 cut(s)	417
NspI	RCATGY	5 cut(s)	419, 1003, 1682, 1703, 1910
PaeI	GCATGC	2 cut(s)	1703, 1910
PagI	TCATGA	2 cut(s)	432, 916
PasI	CCCWGGG	1 cut(s)	563
PciI	ACATGT	1 cut(s)	999
PctI	GAATGC	1 cut(s)	244
PdmI	GAANNNNTTC	1 cut(s)	955
PfeI	GAWTC	8 cut(s)	46, 68, 887, 1103, 1447, 1748, 1871, 1946
PinAI	ACCGGT	1 cut(s)	407
PkrI	GCNGC	3 cut(s)	1041, 1361, 1905
PleI	GAGTC	2 cut(s)	1775, 1891
PmaCI	CACGTG	1 cut(s)	1511
PmlI	CACGTG	1 cut(s)	1511
PpsI	GAGTC	2 cut(s)	1775, 1891
Ppu21I	YACGTR	3 cut(s)	1421, 1511, 1712
PscI	ACATGT	1 cut(s)	999
PshBI	ATTAAT	1 cut(s)	1530
Psp6I	CCWGG	4 cut(s)	562, 1270, 1633, 1841
PspCI	CACGTG	1 cut(s)	1511
PspEI	GGTNACC	1 cut(s)	971
PspFI	CCCAGC	1 cut(s)	373
PspGI	CCWGG	4 cut(s)	562, 1270, 1633, 1841
PspN4I	GGNNCC	3 cut(s)	702, 1262, 1347
PspPI	GGNCC	2 cut(s)	790, 1261
PsrI	GAACNNNNNNTAC	2 cut(s)	1414, 1446
PstNI	CAGNNNCTG	1 cut(s)	1487
PsuI	RGATCY	1 cut(s)	867
PvuII	CAGCTG	1 cut(s)	1903
RsaI	GTAC	4 cut(s)	60, 185, 1059, 1330
RsaNI	GTAC	4 cut(s)	59, 184, 1058, 1329
RseI	CAYNNNNRTG	2 cut(s)	257, 1911
SalI	GTCGAC	1 cut(s)	1317
SaqAI	TTAA	8 cut(s)	522, 761, 864, 963, 1530, 1674, 1866, 2027
SatI	GCNGC	3 cut(s)	1040, 1360, 1904
Sau3AI	GATC	3 cut(s)	867, 1084, 1688
Sau96I	GGNCC	2 cut(s)	790, 1261
SchI	GAGTC	2 cut(s)	1775, 1891
ScrFI	CCNGG	5 cut(s)	564, 1272, 1412, 1635, 1843
SduI	GDGCHC	3 cut(s)	1224, 1499, 1918
SfaNI	GCATC	3 cut(s)	721, 746, 1051
SinI	GGWCC	1 cut(s)	1261
SmiMI	CAYNNNNRTG	2 cut(s)	257, 1911
SmlI	CTYRAG	1 cut(s)	1979
SmoI	CTYRAG	1 cut(s)	1979
SnaBI	TACGTA	1 cut(s)	1421
SphI	GCATGC	2 cut(s)	1703, 1910
SsiI	CCGC	4 cut(s)	10, 271, 481, 1547
SspMI	CTAG	5 cut(s)	902, 1200, 1302, 1722, 2040
StyD4I	CCNGG	5 cut(s)	562, 1270, 1410, 1633, 1841
StyI	CCWWGG	5 cut(s)	167, 191, 469, 946, 1199
TaaI	ACNGT	6 cut(s)	79, 199, 520, 956, 1057, 1960
TaiI	ACGT	5 cut(s)	1324, 1423, 1513, 1714, 1739
TaqI	TCGA	4 cut(s)	27, 495, 1106, 1318
TatI	WGTACW	2 cut(s)	183, 1057
TfiI	GAWTC	8 cut(s)	46, 68, 887, 1103, 1447, 1748, 1871, 1946
Tru1I	TTAA	8 cut(s)	522, 761, 864, 963, 1530, 1674, 1866, 2027
Tru9I	TTAA	8 cut(s)	522, 761, 864, 963, 1530, 1674, 1866, 2027
TscAI	CASTG	6 cut(s)	84, 1087, 1153, 1372, 1945, 1956
TseFI	GTSAC	4 cut(s)	971, 1363, 1728, 1737
TseI	GCWGC	3 cut(s)	1039, 1359, 1903
Tsp45I	GTSAC	4 cut(s)	971, 1363, 1728, 1737
TspDTI	ATGAA	7 cut(s)	329, 761, 905, 1386, 1458, 1548, 1584
TspRI	CASTG	6 cut(s)	84, 1087, 1153, 1372, 1945, 1956
VpaK11BI	GGWCC	1 cut(s)	1261
VspI	ATTAAT	1 cut(s)	1530
XapI	RAATTY	8 cut(s)	316, 384, 653, 860, 1135, 1165, 1335, 1572
XbaI	TCTAGA	1 cut(s)	1721
XceI	RCATGY	5 cut(s)	419, 1003, 1682, 1703, 1910
XmaJI	CCTAGG	1 cut(s)	1199
XmiI	GTMKAC	3 cut(s)	278, 1318, 1417
XmnI	GAANNNNTTC	1 cut(s)	955
XspI	CTAG	5 cut(s)	902, 1200, 1302, 1722, 2040
ZraI	GACGTC	2 cut(s)	1322, 1737
Zsp2I	ATGCAT	1 cut(s)	417

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.