Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008526.1

Orthogroup ID

OG0000936

Physical Location & Seq

Genomic Coordinates Reverse (-)

34851 .. 41849

Gene Structure 6999 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008526.1_g000010.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2286 bp

atggatattacagaggtcacactgatacaccatgtgggccttgtgttagctctgctttggttgctctctcactacaattgctgccacgcattggcatactttctctctctgatttatctctttgtggttcatgagcggtatgttatgcgactgcggaaaaaactacaattcgaggaaagaaagcaggggaatcagagaagggtactttctgattctgaaacagtgcgttggttgaaccatgcagttgaaaagatatggcctatatgtatggaacagattgcttcccagagaattctcctccccatcataccttggtttttggagaagtacaaaccatggactgttagtaaaggtgtagttcagcacctttatttgggaaggaacgcacccatgttcacagagatgagagttctccgccagtctactggtgatgaccatttggttctggagttgggaatgaattttctgacagctgatgatatgcttggaatacttgctgtcaagctaaaaaaaaggctgggctttggaatttgggcaaaattgcatattaccggtatgcatgttgaagggaaggtcatgattggggtgaagttccttcgcaagtggcctttccttggccgtgtgcggttatgctttgtcgagcctccatattttcaaatgaccgtcaagcctatttttactcgtgggcttgatgttacagaagtcccagggattgatggatggctggataagcttctctcaattgcctttgagcagacacttgttcagcctaatatgctggttgttgacatggagaaattcacttcaccggaacaggaaaattggttttctgtggatgagaaggagcctgttgggcatctcaaagtagaagttattgaagcatctgacatgaaagcctccgacttaaatgaaaattggttttctgtggatgagaaggagcctgttgggcatctcaaagtagaagttattgaagcatctgacatgaaagcctccgacttaaatggattttctgacccttatgtgaagggccaattcggcgtttaccaattcaaaactaagatacaaaagaaaacgctgaccccaaaatggtttgaggaatttaagatcccgattatcacatgggattcacctaatgtgctagctattgaagttcatgacagagacatttttgttgatgatacccttggaaactgttccattgacatcggtgaccttagggatggtgtgagacatgacatgtggttgcctcttcagaacatcaaaacagcagggaggctgcatcttgcagtaactgtacttgaagacaatggagagagcagtgatcctccagatgttcgggaatcgaaaatgccaaatatggaagataaaagaaattccttttccagtgagactggtaataaaaattccttctcgtctgtctcatctgagaaatctcctagggtggcagataattatgagcccattgatgttgaagggcaaaaagaaactggtatatgggttcatcacccaggaagtgaagtttcacaaacttgggaggctagaaaaggaaagggtcgacgtcttagtacccaaattcaaggggagcctaatgggagcagcgtcactgatgaaactcaggatgataaacatccaatgcaatcagttcgccggggtctacgtaaacttggttcagtatttcagaagaatcccaaaaaggaggataattcatgcagttttacagagtctgtccagagcccagttactccacgtgtcaatctgagggcaattaatgaaaaggacattgcggtaaaatatgttgtggaagatgaaatttctggtaaagtttcaaaagaaggggcttcaagttctggagagagtagctcaggtagcccaggaaagggcaaggtgaaaggcatggcaaagagtttctttaaacatgctgaaagatcggtaaagcatgcactttcacgtaaaggttctagaaagtcacagacagattcttgtgaaagagaaattatagcagattccgactcttctgacgatgatgatactcctccccccccaatagttgaaatgataccagttgtctccagggacatacctcatccccctgttaatgattcggtcaagtcagatgagcatttgactcagccacttccaagtgctctaagtaatattccagaggacactgaggattcagtgaagaaggttgaacctgaagacacagaaaagacgcttgagaagccggatgaccctgaaaaaaataacgagggattgcctgagccgttaaaagttgaagctaggtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0005886 GO:0012505 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00290 ko00650 ko00660 ko00770 ko01100 ko01110 ko01130 ko01210 ko01230 map00290 map00650 map00660 map00770 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

C2 SMP_LBD

Protein Analysis

761

Amino Acids

86.08

Weight (kDa)

5.74

Isoelectric Point (pI)

39.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000936)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53590 AT3G14590 AT3G14590 AT3G14590 AT3G14590 AT3G14590
fragaria_vesca	FvH4_3g16980 FvH4_3g16980 FvH4_3g16980 FvH4_3g16980 FvH4_3g16980 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020
malus_domestica	MD00G1185500.v1.1 MD00G1185600.v1.1 MD03G1254200.v1.1 MD03G1254900.v1.1 MD11G1275800.v1.1 MD11G1276000.v1.1
prunus_persica	Prupe.4G152200_v2.0.a1 Prupe.4G152200_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1
pyrus_communis	pycom03g20170 pycom03g20190 pycom11g24400
rosa_chinensis	RchiOBHm_Chr2g0135571 RchiOBHm_Chr2g0159501 RchiOBHm_Chr2g0159511 RchiOBHm_Chr5g0028301 RchiOBHm_Chr5g0028351 RchiOBHm_Chr5g0039631
rosa_laevigata	RLG00000033080 RLG00000033088
rosa_multiflora	Rmu_sc0001020.1_g000001 Rmu_sc0002481.1_g000040 Rmu_sc0008526.1_g000010
rosa_roxburghii	Rroxscaffold_1G00051350 Rroxscaffold_1G00051420 Rroxscaffold_1G00051430
rosa_rugosa	Rorug05G0105600
rosa_samantha	Rh1AG292900 Rh4AG059100 Rh5AG199100 Rh5AG199600 Rh5BG197700 Rh5BG198100 Rh5CG217400 Rh5CG218100 Rh5DG199400 Rh5DG200000 Rh7DG370100
rosa_wichuraiana	Rw4G016870 Rw5G018160 Rw5G018190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1561
AccB7I	CCANNNNNTGG	1 cut(s)	91
AccBSI	CCGCTC	1 cut(s)	136
AccI	GTMKAC	3 cut(s)	422, 1555, 1654
AciI	CCGC	5 cut(s)	136, 154, 415, 625, 1784
AclWI	GGATC	2 cut(s)	1099, 1316
AcoI	YGGCCR	1 cut(s)	616
AcsI	RAATTY	9 cut(s)	291, 460, 528, 797, 1097, 1372, 1402, 1572, 1809
AcuI	CTGAAG	2 cut(s)	1235, 2217
AcvI	CACGTG	1 cut(s)	1748
AcyI	GRCGYC	1 cut(s)	1558
AdeI	CACNNNGTG	1 cut(s)	34
AfaI	GTAC	4 cut(s)	204, 329, 1296, 1567
AfiI	CCNNNNNNNGG	6 cut(s)	91, 373, 614, 1086, 1876, 1877
AflIII	ACRYGT	2 cut(s)	1236, 1747
AgeI	ACCGGT	1 cut(s)	551
AjnI	CCWGG	4 cut(s)	706, 1507, 1870, 2069
AluBI	AGCT	7 cut(s)	50, 473, 505, 733, 1142, 1860, 2279
AluI	AGCT	7 cut(s)	50, 473, 505, 733, 1142, 1860, 2279
Alw21I	GWGCWC	1 cut(s)	2146
Alw26I	GTCTC	5 cut(s)	1155, 1222, 1382, 1423, 2071
AlwI	GGATC	2 cut(s)	1099, 1316
AlwNI	CAGNNNCTG	2 cut(s)	1292, 1724
AoxI	GGCC	5 cut(s)	37, 257, 605, 616, 1027
ApeKI	GCWGC	3 cut(s)	81, 1276, 1596
ApoI	RAATTY	9 cut(s)	291, 460, 528, 797, 1097, 1372, 1402, 1572, 1809
AseI	ATTAAT	1 cut(s)	1767
AsiGI	ACCGGT	1 cut(s)	551
Asp700I	GAANNNNTTC	1 cut(s)	1192
AspA2I	CCTAGG	1 cut(s)	1436
AspS9I	GGNCC	2 cut(s)	37, 1027
AsuC2I	CCSGG	1 cut(s)	1649
AsuHPI	GGTGA	7 cut(s)	440, 598, 798, 1119, 1220, 1496, 1897
AsuNHI	GCTAGC	1 cut(s)	1138
AvrII	CCTAGG	1 cut(s)	1436
AxyI	CCTNAGG	1 cut(s)	1214
BanII	GRGCYC	2 cut(s)	1461, 1736
BauI	CACGAG	1 cut(s)	681
BbrPI	CACGTG	1 cut(s)	1748
BbsI	GAAGAC	2 cut(s)	1308, 2205
Bbv12I	GWGCWC	1 cut(s)	2146
BbvI	GCAGC	3 cut(s)	68, 1263, 1608
BccI	CCATC	4 cut(s)	311, 710, 714, 1214
BceAI	ACGGC	2 cut(s)	603, 2248
BcgI	CGANNNNNNTGC	2 cut(s)	1625, 1659
BciT130I	CCWGG	4 cut(s)	708, 1509, 1872, 2071
BcnI	CCSGG	1 cut(s)	1649
BcoDI	GTCTC	5 cut(s)	1155, 1222, 1382, 1423, 2071
BfaI	CTAG	5 cut(s)	1139, 1437, 1539, 1959, 2280
BglI	GCCNNNNNGGC	3 cut(s)	853, 946, 1035
BisI	GCNGC	3 cut(s)	82, 1277, 1597
BlnI	CCTAGG	1 cut(s)	1436
BlsI	GCNGC	3 cut(s)	83, 1278, 1598
Bme1390I	CCNGG	5 cut(s)	708, 1509, 1649, 1872, 2071
BmgT120I	GGNCC	2 cut(s)	37, 1027
BmiI	GGNNCC	3 cut(s)	846, 939, 1584
BmrFI	CCNGG	5 cut(s)	708, 1509, 1649, 1872, 2071
BmrI	ACTGGG	1 cut(s)	1730
BmsI	GCATC	5 cut(s)	865, 890, 958, 983, 1288
BmtI	GCTAGC	1 cut(s)	1142
BmuI	ACTGGG	1 cut(s)	1730
BpiI	GAAGAC	2 cut(s)	1308, 2205
BplI	GAGNNNNNCTC	2 cut(s)	1844, 1876
BpmI	CTGGAG	4 cut(s)	467, 1311, 1869, 2053
Bpu10I	CCTNAGC	2 cut(s)	1861, 2259
BpuEI	CTTGAG	1 cut(s)	2237
BpuMI	CCSGG	1 cut(s)	1649
BsaAI	YACGTR	3 cut(s)	1658, 1748, 1949
BsaBI	GATNNNNATC	1 cut(s)	1626
BsaHI	GRCGYC	1 cut(s)	1558
BsaWI	WCCGGW	2 cut(s)	551, 808
Bsc4I	CCNNNNNNNGG	6 cut(s)	91, 373, 614, 1086, 1876, 1877
Bse118I	RCCGGY	1 cut(s)	551
Bse1I	ACTGG	7 cut(s)	418, 430, 1383, 1396, 1492, 1736, 2060
Bse21I	CCTNAGG	1 cut(s)	1214
Bse3DI	GCAATG	1 cut(s)	1779
Bse8I	GATNNNNATC	1 cut(s)	1626
BseBI	CCWGG	4 cut(s)	708, 1509, 1872, 2071
BseGI	GGATG	8 cut(s)	725, 841, 934, 1225, 1624, 1627, 2083, 2233
BseJI	GATNNNNATC	1 cut(s)	1626
BseLI	CCNNNNNNNGG	6 cut(s)	91, 373, 614, 1086, 1876, 1877
BseMI	GCAATG	1 cut(s)	1779
BseMII	CTCAG	7 cut(s)	1416, 1628, 1748, 1875, 2141, 2160, 2250
BseNI	ACTGG	7 cut(s)	418, 430, 1383, 1396, 1492, 1736, 2060
BseRI	GAGGAG	2 cut(s)	287, 2022
BseXI	GCAGC	3 cut(s)	68, 1263, 1608
BseYI	CCCAGC	1 cut(s)	517
BshFI	GGCC	5 cut(s)	39, 259, 607, 618, 1029
BshTI	ACCGGT	1 cut(s)	551
BsiHKAI	GWGCWC	1 cut(s)	2146
BsiSI	CCGG	4 cut(s)	552, 809, 1648, 2225
BslFI	GGGAC	2 cut(s)	689, 2087
BslI	CCNNNNNNNGG	6 cut(s)	91, 373, 614, 1086, 1876, 1877
BsmAI	GTCTC	5 cut(s)	1155, 1222, 1382, 1423, 2071
BsmFI	GGGAC	2 cut(s)	689, 2087
BsnI	GGCC	5 cut(s)	39, 259, 607, 618, 1029
Bsp1286I	GDGCHC	3 cut(s)	1461, 1736, 2146
Bsp143I	GATC	3 cut(s)	1104, 1321, 1925
Bsp19I	CCATGG	1 cut(s)	335
BspACI	CCGC	5 cut(s)	136, 154, 415, 625, 1784
BspANI	GGCC	5 cut(s)	39, 259, 607, 618, 1029
BspCNI	CTCAG	7 cut(s)	1417, 1627, 1749, 1874, 2140, 2161, 2251
BspHI	TCATGA	3 cut(s)	130, 576, 1153
BspLI	GGNNCC	3 cut(s)	846, 939, 1584
BspOI	GCTAGC	1 cut(s)	1142
BspPI	GGATC	2 cut(s)	1099, 1316
BsrBI	CCGCTC	1 cut(s)	136
BsrDI	GCAATG	1 cut(s)	1779
BsrFI	RCCGGY	1 cut(s)	551
BsrI	ACTGG	7 cut(s)	418, 430, 1383, 1396, 1492, 1736, 2060
BssAI	RCCGGY	1 cut(s)	551
BssMI	GATC	3 cut(s)	1104, 1321, 1925
BssNI	GRCGYC	1 cut(s)	1558
BssSI	CACGAG	1 cut(s)	681
BssT1I	CCWWGG	5 cut(s)	311, 335, 613, 1183, 1436
Bst2BI	CACGAG	1 cut(s)	681
Bst2UI	CCWGG	4 cut(s)	708, 1509, 1872, 2071
Bst4CI	ACNGT	5 cut(s)	223, 343, 664, 1193, 1294
Bst6I	CTCTTC	2 cut(s)	1254, 2017
BstACI	GRCGYC	1 cut(s)	1558
BstBAI	YACGTR	3 cut(s)	1658, 1748, 1949
BstC8I	GCNNGC	2 cut(s)	1140, 1938
BstDSI	CCRYGG	1 cut(s)	335
BstEII	GGTNACC	1 cut(s)	1208
BstF5I	GGATG	8 cut(s)	725, 841, 934, 1225, 1624, 1627, 2083, 2233
BstKTI	GATC	3 cut(s)	1107, 1324, 1928
BstMAI	GTCTC	5 cut(s)	1155, 1222, 1382, 1423, 2071
BstMBI	GATC	3 cut(s)	1104, 1321, 1925
BstMWI	GCNNNNNNNGC	8 cut(s)	61, 730, 775, 853, 946, 1035, 1866, 2221
BstNI	CCWGG	4 cut(s)	708, 1509, 1872, 2071
BstNSI	RCATGY	4 cut(s)	563, 1240, 1919, 1940
BstPI	GGTNACC	1 cut(s)	1208
BstSCI	CCNGG	5 cut(s)	706, 1507, 1647, 1870, 2069
BstSNI	TACGTA	1 cut(s)	1658
BstV1I	GCAGC	3 cut(s)	68, 1263, 1608
BstV2I	GAAGAC	2 cut(s)	1308, 2205
BstX2I	RGATCY	1 cut(s)	1104
BstXI	CCANNNNNNTGG	1 cut(s)	425
BstYI	RGATCY	1 cut(s)	1104
Bsu36I	CCTNAGG	1 cut(s)	1214
BsuRI	GGCC	5 cut(s)	39, 259, 607, 618, 1029
BtgI	CCRYGG	1 cut(s)	335
BtsCI	GGATG	8 cut(s)	725, 841, 934, 1225, 1624, 1627, 2083, 2233
BtsI	GCAGTG	1 cut(s)	1324
BtsIMutI	CAGTG	7 cut(s)	20, 228, 1324, 1390, 1602, 2166, 2184
Cac8I	GCNNGC	2 cut(s)	1140, 1938
CaiI	CAGNNNCTG	2 cut(s)	1292, 1724
CciI	TCATGA	3 cut(s)	130, 576, 1153
Cfr10I	RCCGGY	1 cut(s)	551
Cfr13I	GGNCC	2 cut(s)	37, 1027
CseI	GACGC	2 cut(s)	1588, 2221
Csp6I	GTAC	4 cut(s)	203, 328, 1295, 1566
CspAI	ACCGGT	1 cut(s)	551
CviQI	GTAC	4 cut(s)	203, 328, 1295, 1566
DpnI	GATC	3 cut(s)	1106, 1323, 1927
DpnII	GATC	3 cut(s)	1104, 1321, 1925
DraI	TTTAAA	1 cut(s)	1912
DraIII	CACNNNGTG	1 cut(s)	34
EaeI	YGGCCR	1 cut(s)	616
Eam1104I	CTCTTC	2 cut(s)	1254, 2017
EarI	CTCTTC	2 cut(s)	1254, 2017
EciI	GGCGGA	1 cut(s)	404
Eco105I	TACGTA	1 cut(s)	1658
Eco130I	CCWWGG	5 cut(s)	311, 335, 613, 1183, 1436
Eco24I	GRGCYC	2 cut(s)	1461, 1736
Eco57I	CTGAAG	2 cut(s)	1235, 2217
Eco72I	CACGTG	1 cut(s)	1748
Eco81I	CCTNAGG	1 cut(s)	1214
Eco91I	GGTNACC	1 cut(s)	1208
EcoO65I	GGTNACC	1 cut(s)	1208
EcoRI	GAATTC	1 cut(s)	291
EcoRII	CCWGG	4 cut(s)	706, 1507, 1870, 2069
EcoT14I	CCWWGG	5 cut(s)	311, 335, 613, 1183, 1436
EcoT22I	ATGCAT	1 cut(s)	561
EcoT38I	GRGCYC	2 cut(s)	1461, 1736
ErhI	CCWWGG	5 cut(s)	311, 335, 613, 1183, 1436
FalI	AAGNNNNNCTT	2 cut(s)	1892, 1924
FaqI	GGGAC	2 cut(s)	689, 2087
FblI	GTMKAC	3 cut(s)	422, 1555, 1654
Fnu4HI	GCNGC	3 cut(s)	82, 1277, 1597
FokI	GGATG	8 cut(s)	732, 848, 941, 1232, 1614, 1631, 2070, 2240
FriOI	GRGCYC	2 cut(s)	1461, 1736
Fsp4HI	GCNGC	3 cut(s)	82, 1277, 1597
FspBI	CTAG	5 cut(s)	1139, 1437, 1539, 1959, 2280
GluI	GCNGC	3 cut(s)	82, 1277, 1597
GsaI	CCCAGC	1 cut(s)	521
GsuI	CTGGAG	4 cut(s)	467, 1311, 1869, 2053
HaeIII	GGCC	5 cut(s)	39, 259, 607, 618, 1029
HapII	CCGG	4 cut(s)	552, 809, 1648, 2225
HgaI	GACGC	2 cut(s)	1588, 2221
Hin1I	GRCGYC	1 cut(s)	1558
HincII	GTYRAC	2 cut(s)	787, 1556
HindII	GTYRAC	2 cut(s)	787, 1556
HindIII	AAGCTT	1 cut(s)	731
HpaII	CCGG	4 cut(s)	552, 809, 1648, 2225
HphI	GGTGA	7 cut(s)	440, 598, 798, 1119, 1220, 1496, 1897
Hpy166II	GTNNAC	7 cut(s)	396, 423, 787, 1042, 1556, 1655, 1661
Hpy8I	GTNNAC	7 cut(s)	396, 423, 787, 1042, 1556, 1655, 1661
Hpy99I	CGWCG	1 cut(s)	1560
HpyCH4III	ACNGT	5 cut(s)	223, 343, 664, 1193, 1294
HpyCH4IV	ACGT	4 cut(s)	1558, 1657, 1747, 1948
HpyCH4V	TGCA	8 cut(s)	242, 544, 559, 1279, 1286, 1636, 1710, 1940
HpyF10VI	GCNNNNNNNGC	8 cut(s)	61, 730, 775, 853, 946, 1035, 1866, 2221
HpySE526I	ACGT	4 cut(s)	1558, 1657, 1747, 1948
Hsp92I	GRCGYC	1 cut(s)	1558
Kzo9I	GATC	3 cut(s)	1104, 1321, 1925
LmnI	GCTCC	4 cut(s)	844, 937, 1582, 1593
Lsp1109I	GCAGC	3 cut(s)	68, 1263, 1608
LweI	GCATC	5 cut(s)	865, 890, 958, 983, 1288
MaeI	CTAG	5 cut(s)	1139, 1437, 1539, 1959, 2280
MaeII	ACGT	4 cut(s)	1558, 1657, 1747, 1948
MaeIII	GTNAC	7 cut(s)	16, 694, 1208, 1288, 1600, 1738, 1965
MalI	GATC	3 cut(s)	1106, 1323, 1927
MbiI	CCGCTC	1 cut(s)	136
MboI	GATC	3 cut(s)	1104, 1321, 1925
MboII	GAAGA	8 cut(s)	1241, 1313, 1373, 1693, 1814, 2004, 2194, 2210
MfeI	CAATTG	2 cut(s)	76, 741
MflI	RGATCY	1 cut(s)	1104
MhlI	GDGCHC	3 cut(s)	1461, 1736, 2146
MlyI	GAGTC	3 cut(s)	1730, 2003, 2119
MmeI	TCCRAC	3 cut(s)	924, 1017, 2031
Mph1103I	ATGCAT	1 cut(s)	561
MroXI	GAANNNNTTC	1 cut(s)	1192
MseI	TTAA	7 cut(s)	905, 998, 1101, 1767, 1911, 2094, 2267
MslI	CAYNNNNRTG	1 cut(s)	401
MspA1I	CMGCKG	1 cut(s)	473
MspI	CCGG	4 cut(s)	552, 809, 1648, 2225
MspR9I	CCNGG	5 cut(s)	708, 1509, 1649, 1872, 2071
MunI	CAATTG	2 cut(s)	76, 741
MvaI	CCWGG	4 cut(s)	708, 1509, 1872, 2071
MwoI	GCNNNNNNNGC	8 cut(s)	61, 730, 775, 853, 946, 1035, 1866, 2221
NciI	CCSGG	1 cut(s)	1649
NcoI	CCATGG	1 cut(s)	335
NdeII	GATC	3 cut(s)	1104, 1321, 1925
NheI	GCTAGC	1 cut(s)	1138
NlaIV	GGNNCC	3 cut(s)	846, 939, 1584
NmuCI	GTSAC	4 cut(s)	16, 1208, 1600, 1965
NsiI	ATGCAT	1 cut(s)	561
NspI	RCATGY	4 cut(s)	563, 1240, 1919, 1940
PaeI	GCATGC	1 cut(s)	1940
PagI	TCATGA	3 cut(s)	130, 576, 1153
PasI	CCCWGGG	1 cut(s)	707
PciI	ACATGT	1 cut(s)	1236
PdmI	GAANNNNTTC	1 cut(s)	1192
PfeI	GAWTC	9 cut(s)	190, 212, 1124, 1340, 1684, 1976, 2003, 2099, 2174
PflMI	CCANNNNNTGG	1 cut(s)	91
PinAI	ACCGGT	1 cut(s)	551
PkrI	GCNGC	3 cut(s)	83, 1278, 1598
PleI	GAGTC	3 cut(s)	1729, 2003, 2119
PmaCI	CACGTG	1 cut(s)	1748
PmlI	CACGTG	1 cut(s)	1748
PpsI	GAGTC	3 cut(s)	1729, 2003, 2119
Ppu21I	YACGTR	3 cut(s)	1658, 1748, 1949
PscI	ACATGT	1 cut(s)	1236
PshBI	ATTAAT	1 cut(s)	1767
Psp6I	CCWGG	4 cut(s)	706, 1507, 1870, 2069
PspCI	CACGTG	1 cut(s)	1748
PspEI	GGTNACC	1 cut(s)	1208
PspFI	CCCAGC	1 cut(s)	517
PspGI	CCWGG	4 cut(s)	706, 1507, 1870, 2069
PspN4I	GGNNCC	3 cut(s)	846, 939, 1584
PspPI	GGNCC	2 cut(s)	37, 1027
PsrI	GAACNNNNNNTAC	2 cut(s)	1651, 1683
PstNI	CAGNNNCTG	2 cut(s)	1292, 1724
PsuI	RGATCY	1 cut(s)	1104
PvuII	CAGCTG	1 cut(s)	473
RsaI	GTAC	4 cut(s)	204, 329, 1296, 1567
RsaNI	GTAC	4 cut(s)	203, 328, 1295, 1566
RseI	CAYNNNNRTG	1 cut(s)	401
SalI	GTCGAC	1 cut(s)	1554
SaqAI	TTAA	7 cut(s)	905, 998, 1101, 1767, 1911, 2094, 2267
SatI	GCNGC	3 cut(s)	82, 1277, 1597
Sau3AI	GATC	3 cut(s)	1104, 1321, 1925
Sau96I	GGNCC	2 cut(s)	37, 1027
SchI	GAGTC	3 cut(s)	1730, 2003, 2119
ScrFI	CCNGG	5 cut(s)	708, 1509, 1649, 1872, 2071
SduI	GDGCHC	3 cut(s)	1461, 1736, 2146
SfaNI	GCATC	5 cut(s)	865, 890, 958, 983, 1288
SmiMI	CAYNNNNRTG	1 cut(s)	401
SmlI	CTYRAG	1 cut(s)	2216
SmoI	CTYRAG	1 cut(s)	2216
SnaBI	TACGTA	1 cut(s)	1658
SphI	GCATGC	1 cut(s)	1940
SsiI	CCGC	5 cut(s)	136, 154, 415, 625, 1784
SspI	AATATT	1 cut(s)	2155
SspMI	CTAG	5 cut(s)	1139, 1437, 1539, 1959, 2280
StyD4I	CCNGG	5 cut(s)	706, 1507, 1647, 1870, 2069
StyI	CCWWGG	5 cut(s)	311, 335, 613, 1183, 1436
TaaI	ACNGT	5 cut(s)	223, 343, 664, 1193, 1294
TaiI	ACGT	4 cut(s)	1561, 1660, 1750, 1951
TaqI	TCGA	4 cut(s)	171, 639, 1343, 1555
TaqII	GACCGA	1 cut(s)	2092
TatI	WGTACW	2 cut(s)	327, 1294
TfiI	GAWTC	9 cut(s)	190, 212, 1124, 1340, 1684, 1976, 2003, 2099, 2174
Tru1I	TTAA	7 cut(s)	905, 998, 1101, 1767, 1911, 2094, 2267
Tru9I	TTAA	7 cut(s)	905, 998, 1101, 1767, 1911, 2094, 2267
TscAI	CASTG	7 cut(s)	27, 228, 1324, 1390, 1609, 2173, 2184
TseFI	GTSAC	4 cut(s)	16, 1208, 1600, 1965
TseI	GCWGC	3 cut(s)	81, 1276, 1596
Tsp45I	GTSAC	4 cut(s)	16, 1208, 1600, 1965
TspRI	CASTG	7 cut(s)	27, 228, 1324, 1390, 1609, 2173, 2184
Van91I	CCANNNNNTGG	1 cut(s)	91
VspI	ATTAAT	1 cut(s)	1767
XapI	RAATTY	9 cut(s)	291, 460, 528, 797, 1097, 1372, 1402, 1572, 1809
XbaI	TCTAGA	1 cut(s)	1958
XceI	RCATGY	4 cut(s)	563, 1240, 1919, 1940
XmaJI	CCTAGG	1 cut(s)	1436
XmiI	GTMKAC	3 cut(s)	422, 1555, 1654
XmnI	GAANNNNTTC	1 cut(s)	1192
XspI	CTAG	5 cut(s)	1139, 1437, 1539, 1959, 2280
ZraI	GACGTC	1 cut(s)	1559
Zsp2I	ATGCAT	1 cut(s)	561

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.