Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0000936

Physical Location & Seq

Genomic Coordinates Forward (+)

34132346 .. 34137390

Gene Structure 5045 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1254900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1968 bp

ATGGATATAACAGAGATGTCAATAATACACCATGTGGGGATTGTGCTATGTGGCCTGTGGTTGCTTTCCCACTACAATTGCTGCTACCCAGTTGCCTACTTTCTTTCTCTCGTTTATCTTTACCTGGTTCATGAACGGTACCTTATGAGACTGCGGAAGAAATTACAGTTCGAGGAAAGACAACAGGCTAATCAGAGACGGGTGCTTTCTGAATCTGAGACAGTGCGGTGGTTGAACCACACAATTGAAAAGATATGGCCTATATGTATGGAACAGATTGCTTCACAGCAGATCCTCCTTCCTATCATACCTTGGTTTTTGGAGAAGTACAAGCCATGGACAGCCAAGGAAGCGGTAGTTCAGCACCTTTACTTGGGAAGAAATGCACCTATACTCACAGAGATGAGAGTGGTTCGCCAGTCTGCTGATGATGACCACCTGGTTCTGGAGTTGGGATTGAATTTTCTTACGGCTGATGATATGATCGCAATACTTGCTGTGAAGTTAAGGAAAAGACTAGGTTTTGGGATGTGGGCAAAGTTGCATATTACAGGCATGCATGTTGAAGGGAAGGTCTTGATTGGAGTGAAGTTTCTTCGCAGGTGGCCATTCCTTGGCCGCGTGCGGTTGTGCTTCGTTCAGCCTCCATATTTTCAGATGACTGTTAAGCCTATTTTCACTCATGGACTTGACGTTACAGTACTCCCTGGGATTGCTGGATGGCTGGAGAAGCTTCTTTCAATTGCGTTTGAGCAGACACTTGTTGAGCCTAATATGCTGGTTGTTGACATGGAAAAATTCGTTTCCCCAAAGCAAGAAAGCTGGTTCTCTGTGAACGAGAAGGAGGCTCTTGCTCATGTCAAAGTAGAAGTTATTGAAGCATCTGATGTGAAAGCAGCCGATTTAAATGGATTTTCTGACCCTTATGCTAAAGGTCAATTGGGCCTTTACCGGTTTAGGACTAAGATACAAAAGAAAACACTGTCTCCAAAATGGCATGAGGAGTTCAAGATCCCCATTCTTACATGGGATGCACCTAATGTGCTGGCTATTGAAGTTTGTGACAAGGACCGATTCGTCGATGATGCTCTTGGCGACTGCTCGATTAACATTAATGATCTTAGAGACAGCCAGAGACATGACATGTGGGTGCCGCTTCAGAATATTAAAACCGGGAGGCTGCATCTTGCCGTAACTGTCATTGAAGACAATGTGAAGGGACCTGAGCAGTCAGAGGTTCAGGAAACGGTAACTTTGGAAGATAGAAGAAATTCATTTGCCAGCGACGCTAATGAAAGTTCCTTCTCGTCTATATCATCCGAGAAGTCTAACAGGGTAGCAGATAACTTTGAGCCGATTGATGTTGAAGGGCAAAAAGAGACTGGTATATGGGTTCATCACCCAGGAAGTGAAGTTTCACAAACTTGGGAAAGTAGACAAGGAAGGAGCCGACTACTTGACAACGAGATTCTAAATGATACTGGTAGCCGTAGTTCAGCTACATATGGATCCCAAAATAATGACGACAGTGGCATGGATAAAGATCCTGAGGAGAAACGGCACATGAAAGGAGTTCGCAAGGGACTAAATAAGTTCTGTGCGAAGTTCCACAGGAATTCCAAGAAGGACCTGGGTACAAGCAGCTTTAAAGAGACTGCTCGTTCTGAAAGTATTAATCTTAGAGGAGTTCATGACAATGAGAGTGGGGTGAAATTTATTGTGGAAGACGACCTTTCTGAGCCTCTTTCTTCTAAGGTTCCGAAAGGACAGGATTTCACTCCTGCAGGAGGGACTGGTTCAGATACCCCGGCAAAGGGCAAGTTGAGAGAGACGAAAAGTTTCTTCAAGCGTAATCAAAAATCTGACAGAAAAGATTTTGCAAAGTCTCAAAGTGATTCTTTGGTAGTGAACGGAAGAGAAATATTAGAAAATCTCAACTCTTCTGATGATGATCCTCTGCCCAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0005886 GO:0012505 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00290 ko00650 ko00660 ko00770 ko01100 ko01110 ko01130 ko01210 ko01230 map00290 map00650 map00660 map00770 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

C2 SMP_LBD

Protein Analysis

656

Amino Acids

74.71

Weight (kDa)

6.58

Isoelectric Point (pI)

46.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SMP_MUG190-like	PF25669	187 - 269	1.9e-08	MUG190-like SMP domain
C2	PF00168	286 - 386	2.4e-21	C2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000936)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53590 AT3G14590 AT3G14590 AT3G14590 AT3G14590 AT3G14590
fragaria_vesca	FvH4_3g16980 FvH4_3g16980 FvH4_3g16980 FvH4_3g16980 FvH4_3g16980 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020
malus_domestica	MD00G1185500.v1.1 MD00G1185600.v1.1 MD03G1254200.v1.1 MD03G1254900.v1.1 MD11G1275800.v1.1 MD11G1276000.v1.1
prunus_persica	Prupe.4G152200_v2.0.a1 Prupe.4G152200_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1
pyrus_communis	pycom03g20170 pycom03g20190 pycom11g24400
rosa_chinensis	RchiOBHm_Chr2g0135571 RchiOBHm_Chr2g0159501 RchiOBHm_Chr2g0159511 RchiOBHm_Chr5g0028301 RchiOBHm_Chr5g0028351 RchiOBHm_Chr5g0039631
rosa_laevigata	RLG00000033080 RLG00000033088
rosa_multiflora	Rmu_sc0001020.1_g000001 Rmu_sc0002481.1_g000040 Rmu_sc0008526.1_g000010
rosa_roxburghii	Rroxscaffold_1G00051350 Rroxscaffold_1G00051420 Rroxscaffold_1G00051430
rosa_rugosa	Rorug05G0105600
rosa_samantha	Rh1AG292900 Rh4AG059100 Rh5AG199100 Rh5AG199600 Rh5BG197700 Rh5BG198100 Rh5CG217400 Rh5CG218100 Rh5DG199400 Rh5DG200000 Rh7DG370100
rosa_wichuraiana	Rw4G016870 Rw5G018160 Rw5G018190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	591
AasI	GACNNNNNNGTC	1 cut(s)	1076
Acc36I	ACCTGC	1 cut(s)	591
Acc65I	GGTACC	1 cut(s)	138
AccB1I	GGYRCC	2 cut(s)	138, 1150
AccB7I	CCANNNNNTGG	1 cut(s)	614
AccI	GTMKAC	1 cut(s)	1435
AccII	CGCG	1 cut(s)	621
AciI	CCGC	6 cut(s)	154, 226, 353, 619, 625, 1154
AclWI	GGATC	6 cut(s)	286, 1006, 1503, 1516, 1538, 1946
AcoI	YGGCCR	2 cut(s)	605, 616
AcsI	RAATTY	5 cut(s)	460, 797, 1270, 1615, 1712
AcuI	CTGAAG	1 cut(s)	1142
AdeI	CACNNNGTG	1 cut(s)	34
AfaI	GTAC	4 cut(s)	140, 329, 702, 1636
AfiI	CCNNNNNNNGG	6 cut(s)	373, 445, 614, 1787, 1813, 1814
AflIII	ACRYGT	1 cut(s)	1143
AgeI	ACCGGT	1 cut(s)	951
AjnI	CCWGG	5 cut(s)	123, 438, 706, 1402, 1629
AluBI	AGCT	4 cut(s)	733, 822, 1499, 1644
AluI	AGCT	4 cut(s)	733, 822, 1499, 1644
AlwI	GGATC	6 cut(s)	286, 1006, 1503, 1516, 1538, 1946
AoxI	GGCC	5 cut(s)	52, 257, 605, 616, 943
ApeKI	GCWGC	4 cut(s)	81, 896, 1180, 1641
ApoI	RAATTY	5 cut(s)	460, 797, 1270, 1615, 1712
AseI	ATTAAT	2 cut(s)	1113, 1674
AsiGI	ACCGGT	1 cut(s)	951
Asp700I	GAANNNNTTC	2 cut(s)	1270, 1838
Asp718I	GGTACC	1 cut(s)	138
AspS9I	GGNCC	4 cut(s)	943, 1069, 1220, 1627
AsuC2I	CCSGG	2 cut(s)	1174, 1808
AsuHPI	GGTGA	2 cut(s)	1391, 1720
AvaII	GGWCC	3 cut(s)	1069, 1220, 1627
AxyI	CCTNAGG	1 cut(s)	1548
BalI	TGGCCA	1 cut(s)	607
BamHI	GGATCC	1 cut(s)	1508
BanI	GGYRCC	2 cut(s)	138, 1150
BbsI	GAAGAC	2 cut(s)	1212, 1731
BbvI	GCAGC	4 cut(s)	68, 908, 1167, 1653
BccI	CCATC	1 cut(s)	714
BceAI	ACGGC	4 cut(s)	486, 1175, 1473, 1574
BciT130I	CCWGG	5 cut(s)	125, 440, 708, 1404, 1631
BcnI	CCSGG	2 cut(s)	1174, 1808
BfaI	CTAG	1 cut(s)	518
BfmI	CTRYAG	1 cut(s)	1782
BfuAI	ACCTGC	1 cut(s)	591
BisI	GCNGC	6 cut(s)	82, 619, 897, 1154, 1181, 1642
BlsI	GCNGC	6 cut(s)	83, 620, 898, 1155, 1182, 1643
BmcAI	AGTACT	1 cut(s)	702
Bme1390I	CCNGG	7 cut(s)	125, 440, 708, 1174, 1404, 1631, 1808
Bme18I	GGWCC	3 cut(s)	1069, 1220, 1627
BmgT120I	GGNCC	4 cut(s)	943, 1069, 1220, 1627
BmiI	GGNNCC	6 cut(s)	140, 1152, 1221, 1448, 1510, 1758
BmrFI	CCNGG	7 cut(s)	125, 440, 708, 1174, 1404, 1631, 1808
BmrI	ACTGGG	1 cut(s)	83
BmsI	GCATC	4 cut(s)	890, 1021, 1075, 1192
BmuI	ACTGGG	1 cut(s)	83
BpiI	GAAGAC	2 cut(s)	1212, 1731
BpmI	CTGGAG	2 cut(s)	467, 746
Bpu10I	CCTNAGC	1 cut(s)	1224
BpuMI	CCSGG	2 cut(s)	1174, 1808
BsaBI	GATNNNNATC	2 cut(s)	1542, 1950
BsaJI	CCNNGG	9 cut(s)	311, 335, 345, 613, 706, 707, 1402, 1630, 1806
BsaWI	WCCGGW	1 cut(s)	951
BsaXI	ACNNNNNCTCC	2 cut(s)	970, 1000
Bsc4I	CCNNNNNNNGG	6 cut(s)	373, 445, 614, 1787, 1813, 1814
Bse118I	RCCGGY	1 cut(s)	951
Bse1I	ACTGG	5 cut(s)	89, 418, 1387, 1486, 1798
Bse21I	CCTNAGG	1 cut(s)	1548
Bse8I	GATNNNNATC	2 cut(s)	1542, 1950
BseBI	CCWGG	5 cut(s)	125, 440, 708, 1404, 1631
BseDI	CCNNGG	9 cut(s)	311, 335, 345, 613, 706, 707, 1402, 1630, 1806
BseGI	GGATG	4 cut(s)	534, 725, 1036, 1316
BseJI	GATNNNNATC	2 cut(s)	1542, 1950
BseLI	CCNNNNNNNGG	6 cut(s)	373, 445, 614, 1787, 1813, 1814
BseMII	CTCAG	4 cut(s)	207, 1215, 1539, 1728
BseNI	ACTGG	5 cut(s)	89, 418, 1387, 1486, 1798
BseRI	GAGGAG	3 cut(s)	1016, 1565, 1698
BseXI	GCAGC	4 cut(s)	68, 908, 1167, 1653
Bsh1236I	CGCG	1 cut(s)	621
BshFI	GGCC	5 cut(s)	54, 259, 607, 618, 945
BshNI	GGYRCC	2 cut(s)	138, 1150
BshTI	ACCGGT	1 cut(s)	951
BsiSI	CCGG	3 cut(s)	952, 1173, 1808
BslFI	GGGAC	3 cut(s)	1233, 1596, 1804
BslI	CCNNNNNNNGG	6 cut(s)	373, 445, 614, 1787, 1813, 1814
BsmBI	CGTCTC	2 cut(s)	190, 1823
BsmFI	GGGAC	3 cut(s)	1233, 1596, 1804
BsnI	GGCC	5 cut(s)	54, 259, 607, 618, 945
Bsp143I	GATC	7 cut(s)	291, 483, 1011, 1117, 1508, 1543, 1951
Bsp19I	CCATGG	1 cut(s)	335
BspACI	CCGC	6 cut(s)	154, 226, 353, 619, 625, 1154
BspANI	GGCC	5 cut(s)	54, 259, 607, 618, 945
BspCNI	CTCAG	4 cut(s)	208, 1216, 1540, 1729
BspFNI	CGCG	1 cut(s)	621
BspHI	TCATGA	2 cut(s)	130, 1690
BspLI	GGNNCC	6 cut(s)	140, 1152, 1221, 1448, 1510, 1758
BspMAI	CTGCAG	1 cut(s)	1786
BspMI	ACCTGC	1 cut(s)	591
BspPI	GGATC	6 cut(s)	286, 1006, 1503, 1516, 1538, 1946
BspT107I	GGYRCC	2 cut(s)	138, 1150
BsrFI	RCCGGY	1 cut(s)	951
BsrI	ACTGG	5 cut(s)	89, 418, 1387, 1486, 1798
BssAI	RCCGGY	1 cut(s)	951
BssECI	CCNNGG	9 cut(s)	311, 335, 345, 613, 706, 707, 1402, 1630, 1806
BssMI	GATC	7 cut(s)	291, 483, 1011, 1117, 1508, 1543, 1951
BssT1I	CCWWGG	4 cut(s)	311, 335, 345, 613
Bst2UI	CCWGG	5 cut(s)	125, 440, 708, 1404, 1631
Bst4CI	ACNGT	9 cut(s)	138, 168, 223, 664, 700, 984, 1198, 1249, 1529
Bst6I	CTCTTC	2 cut(s)	1909, 1945
BstAPI	GCANNNNNTGC	1 cut(s)	494
BstC8I	GCNNGC	4 cut(s)	557, 623, 1047, 1282
BstDEI	CTNAG	8 cut(s)	216, 963, 1121, 1224, 1548, 1679, 1737, 1752
BstDSI	CCRYGG	1 cut(s)	335
BstENI	CCTNNNNNAGG	1 cut(s)	1785
BstF5I	GGATG	4 cut(s)	534, 725, 1036, 1316
BstFNI	CGCG	1 cut(s)	621
BstKTI	GATC	7 cut(s)	294, 486, 1014, 1120, 1511, 1546, 1954
BstMBI	GATC	7 cut(s)	291, 483, 1011, 1117, 1508, 1543, 1951
BstMWI	GCNNNNNNNGC	5 cut(s)	350, 494, 730, 775, 1286
BstNI	CCWGG	5 cut(s)	125, 440, 708, 1404, 1631
BstNSI	RCATGY	3 cut(s)	559, 563, 1147
BstSCI	CCNGG	7 cut(s)	123, 438, 706, 1172, 1402, 1629, 1806
BstSFI	CTRYAG	1 cut(s)	1782
BstUI	CGCG	1 cut(s)	621
BstV1I	GCAGC	4 cut(s)	68, 908, 1167, 1653
BstV2I	GAAGAC	2 cut(s)	1212, 1731
BstX2I	RGATCY	4 cut(s)	291, 1011, 1508, 1543
BstYI	RGATCY	4 cut(s)	291, 1011, 1508, 1543
Bsu36I	CCTNAGG	1 cut(s)	1548
BsuRI	GGCC	5 cut(s)	54, 259, 607, 618, 945
BtgI	CCRYGG	1 cut(s)	335
BtsCI	GGATG	4 cut(s)	534, 725, 1036, 1316
BtsIMutI	CAGTG	3 cut(s)	228, 980, 1534
BveI	ACCTGC	1 cut(s)	591
Cac8I	GCNNGC	4 cut(s)	557, 623, 1047, 1282
CciI	TCATGA	2 cut(s)	130, 1690
Cfr10I	RCCGGY	1 cut(s)	951
Cfr13I	GGNCC	4 cut(s)	943, 1069, 1220, 1627
CseI	GACGC	1 cut(s)	1295
CsiI	ACCWGGT	2 cut(s)	123, 438
Csp6I	GTAC	4 cut(s)	139, 328, 701, 1635
CspAI	ACCGGT	1 cut(s)	951
CspCI	CAANNNNNGTGG	4 cut(s)	59, 94, 1684, 1719
CviQI	GTAC	4 cut(s)	139, 328, 701, 1635
DdeI	CTNAG	8 cut(s)	216, 963, 1121, 1224, 1548, 1679, 1737, 1752
DpnI	GATC	7 cut(s)	293, 485, 1013, 1119, 1510, 1545, 1953
DpnII	GATC	7 cut(s)	291, 483, 1011, 1117, 1508, 1543, 1951
DraI	TTTAAA	2 cut(s)	906, 1648
DraIII	CACNNNGTG	1 cut(s)	34
DrdI	GACNNNNNNGTC	1 cut(s)	1076
DseDI	GACNNNNNNGTC	1 cut(s)	1076
EaeI	YGGCCR	2 cut(s)	605, 616
Eam1104I	CTCTTC	2 cut(s)	1909, 1945
EarI	CTCTTC	2 cut(s)	1909, 1945
Eco130I	CCWWGG	4 cut(s)	311, 335, 345, 613
Eco47I	GGWCC	3 cut(s)	1069, 1220, 1627
Eco57I	CTGAAG	1 cut(s)	1142
Eco81I	CCTNAGG	1 cut(s)	1548
EcoNI	CCTNNNNNAGG	1 cut(s)	1785
EcoO109I	RGGNCCY	2 cut(s)	1220, 1627
EcoRI	GAATTC	1 cut(s)	1615
EcoRII	CCWGG	5 cut(s)	123, 438, 706, 1402, 1629
EcoT14I	CCWWGG	4 cut(s)	311, 335, 345, 613
EcoT22I	ATGCAT	1 cut(s)	561
ErhI	CCWWGG	4 cut(s)	311, 335, 345, 613
Esp3I	CGTCTC	2 cut(s)	190, 1823
FalI	AAGNNNNNCTT	4 cut(s)	1716, 1748, 1882, 1914
FaqI	GGGAC	3 cut(s)	1233, 1596, 1804
FauNDI	CATATG	1 cut(s)	1504
FblI	GTMKAC	1 cut(s)	1435
Fnu4HI	GCNGC	6 cut(s)	82, 619, 897, 1154, 1181, 1642
FokI	GGATG	4 cut(s)	541, 732, 1043, 1303
Fsp4HI	GCNGC	6 cut(s)	82, 619, 897, 1154, 1181, 1642
FspBI	CTAG	1 cut(s)	518
GluI	GCNGC	6 cut(s)	82, 619, 897, 1154, 1181, 1642
GsuI	CTGGAG	2 cut(s)	467, 746
HaeIII	GGCC	5 cut(s)	54, 259, 607, 618, 945
HapII	CCGG	3 cut(s)	952, 1173, 1808
HgaI	GACGC	1 cut(s)	1295
HincII	GTYRAC	1 cut(s)	787
HindII	GTYRAC	1 cut(s)	787
HindIII	AAGCTT	1 cut(s)	731
HinfI	GANTC	4 cut(s)	212, 1074, 1468, 1895
HpaII	CCGG	3 cut(s)	952, 1173, 1808
HphI	GGTGA	2 cut(s)	1391, 1720
Hpy166II	GTNNAC	4 cut(s)	787, 835, 1436, 1909
Hpy188III	TCNNGA	7 cut(s)	131, 446, 577, 1009, 1241, 1547, 1691
Hpy8I	GTNNAC	4 cut(s)	787, 835, 1436, 1909
Hpy99I	CGWCG	2 cut(s)	1082, 1289
HpyAV	CCTTC	9 cut(s)	308, 560, 565, 835, 1210, 1312, 1361, 1437, 1618
HpyCH4III	ACNGT	9 cut(s)	138, 168, 223, 664, 700, 984, 1198, 1249, 1529
HpyCH4IV	ACGT	1 cut(s)	693
HpyCH4V	TGCA	7 cut(s)	386, 544, 559, 1034, 1183, 1784, 1880
HpyF10VI	GCNNNNNNNGC	5 cut(s)	350, 494, 730, 775, 1286
HpyF3I	CTNAG	8 cut(s)	216, 963, 1121, 1224, 1548, 1679, 1737, 1752
HpySE526I	ACGT	1 cut(s)	693
KpnI	GGTACC	1 cut(s)	142
Kzo9I	GATC	7 cut(s)	291, 483, 1011, 1117, 1508, 1543, 1951
LmnI	GCTCC	1 cut(s)	1446
Lsp1109I	GCAGC	4 cut(s)	68, 908, 1167, 1653
LweI	GCATC	4 cut(s)	890, 1021, 1075, 1192
MabI	ACCWGGT	2 cut(s)	123, 438
MaeI	CTAG	1 cut(s)	518
MaeII	ACGT	1 cut(s)	693
MaeIII	GTNAC	4 cut(s)	694, 1061, 1192, 1249
MalI	GATC	7 cut(s)	293, 485, 1013, 1119, 1510, 1545, 1953
MboI	GATC	7 cut(s)	291, 483, 1011, 1117, 1508, 1543, 1951
MfeI	CAATTG	4 cut(s)	76, 243, 741, 938
MflI	RGATCY	4 cut(s)	291, 1011, 1508, 1543
MlsI	TGGCCA	1 cut(s)	607
MluNI	TGGCCA	1 cut(s)	607
Mox20I	TGGCCA	1 cut(s)	607
Mph1103I	ATGCAT	1 cut(s)	561
MroXI	GAANNNNTTC	2 cut(s)	1270, 1838
MscI	TGGCCA	1 cut(s)	607
MseI	TTAA	8 cut(s)	506, 666, 905, 1107, 1113, 1167, 1647, 1674
MslI	CAYNNNNRTG	3 cut(s)	401, 1148, 1695
Msp20I	TGGCCA	1 cut(s)	607
MspI	CCGG	3 cut(s)	952, 1173, 1808
MspR9I	CCNGG	7 cut(s)	125, 440, 708, 1174, 1404, 1631, 1808
MunI	CAATTG	4 cut(s)	76, 243, 741, 938
MvaI	CCWGG	5 cut(s)	125, 440, 708, 1404, 1631
MvnI	CGCG	1 cut(s)	621
MwoI	GCNNNNNNNGC	5 cut(s)	350, 494, 730, 775, 1286
NciI	CCSGG	2 cut(s)	1174, 1808
NcoI	CCATGG	1 cut(s)	335
NdeI	CATATG	1 cut(s)	1504
NdeII	GATC	7 cut(s)	291, 483, 1011, 1117, 1508, 1543, 1951
NlaIV	GGNNCC	6 cut(s)	140, 1152, 1221, 1448, 1510, 1758
NmuCI	GTSAC	1 cut(s)	1061
NsiI	ATGCAT	1 cut(s)	561
NspI	RCATGY	3 cut(s)	559, 563, 1147
PaeI	GCATGC	1 cut(s)	559
PagI	TCATGA	2 cut(s)	130, 1690
PaqCI	CACCTGC	1 cut(s)	591
PasI	CCCWGGG	1 cut(s)	707
PciI	ACATGT	1 cut(s)	1143
PdmI	GAANNNNTTC	2 cut(s)	1270, 1838
PfeI	GAWTC	4 cut(s)	212, 1074, 1468, 1895
PflMI	CCANNNNNTGG	1 cut(s)	614
PinAI	ACCGGT	1 cut(s)	951
PkrI	GCNGC	6 cut(s)	83, 620, 898, 1155, 1182, 1643
PpuMI	RGGWCCY	2 cut(s)	1220, 1627
PscI	ACATGT	1 cut(s)	1143
PshBI	ATTAAT	2 cut(s)	1113, 1674
Psp5II	RGGWCCY	2 cut(s)	1220, 1627
Psp6I	CCWGG	5 cut(s)	123, 438, 706, 1402, 1629
PspGI	CCWGG	5 cut(s)	123, 438, 706, 1402, 1629
PspN4I	GGNNCC	6 cut(s)	140, 1152, 1221, 1448, 1510, 1758
PspPI	GGNCC	4 cut(s)	943, 1069, 1220, 1627
PspPPI	RGGWCCY	2 cut(s)	1220, 1627
PsrI	GAACNNNNNNTAC	2 cut(s)	1477, 1509
PstI	CTGCAG	1 cut(s)	1786
PsuI	RGATCY	4 cut(s)	291, 1011, 1508, 1543
RsaI	GTAC	4 cut(s)	140, 329, 702, 1636
RsaNI	GTAC	4 cut(s)	139, 328, 701, 1635
RseI	CAYNNNNRTG	3 cut(s)	401, 1148, 1695
SaqAI	TTAA	8 cut(s)	506, 666, 905, 1107, 1113, 1167, 1647, 1674
SatI	GCNGC	6 cut(s)	82, 619, 897, 1154, 1181, 1642
Sau3AI	GATC	7 cut(s)	291, 483, 1011, 1117, 1508, 1543, 1951
Sau96I	GGNCC	4 cut(s)	943, 1069, 1220, 1627
SbfI	CCTGCAGG	1 cut(s)	1786
ScaI	AGTACT	1 cut(s)	702
ScrFI	CCNGG	7 cut(s)	125, 440, 708, 1174, 1404, 1631, 1808
SdaI	CCTGCAGG	1 cut(s)	1786
SexAI	ACCWGGT	2 cut(s)	123, 438
SfaNI	GCATC	4 cut(s)	890, 1021, 1075, 1192
SfcI	CTRYAG	1 cut(s)	1782
SinI	GGWCC	3 cut(s)	1069, 1220, 1627
SmiI	ATTTAAAT	1 cut(s)	906
SmiMI	CAYNNNNRTG	3 cut(s)	401, 1148, 1695
SphI	GCATGC	1 cut(s)	559
Sse8387I	CCTGCAGG	1 cut(s)	1786
SsiI	CCGC	6 cut(s)	154, 226, 353, 619, 625, 1154
SspI	AATATT	2 cut(s)	1165, 1923
SspMI	CTAG	1 cut(s)	518
StyD4I	CCNGG	7 cut(s)	123, 438, 706, 1172, 1402, 1629, 1806
StyI	CCWWGG	4 cut(s)	311, 335, 345, 613
SwaI	ATTTAAAT	1 cut(s)	906
TaaI	ACNGT	9 cut(s)	138, 168, 223, 664, 700, 984, 1198, 1249, 1529
TaiI	ACGT	1 cut(s)	696
TaqI	TCGA	3 cut(s)	171, 1080, 1103
TaqII	GACCGA	1 cut(s)	1086
TatI	WGTACW	2 cut(s)	327, 700
TauI	GCSGC	2 cut(s)	621, 1156
TfiI	GAWTC	4 cut(s)	212, 1074, 1468, 1895
Tru1I	TTAA	8 cut(s)	506, 666, 905, 1107, 1113, 1167, 1647, 1674
Tru9I	TTAA	8 cut(s)	506, 666, 905, 1107, 1113, 1167, 1647, 1674
TscAI	CASTG	3 cut(s)	228, 987, 1534
TseFI	GTSAC	1 cut(s)	1061
TseI	GCWGC	4 cut(s)	81, 896, 1180, 1641
Tsp45I	GTSAC	1 cut(s)	1061
TspDTI	ATGAA	7 cut(s)	119, 147, 1263, 1308, 1385, 1580, 1679
TspGWI	ACGGA	1 cut(s)	1926
TspRI	CASTG	3 cut(s)	228, 987, 1534
Van91I	CCANNNNNTGG	1 cut(s)	614
VpaK11BI	GGWCC	3 cut(s)	1069, 1220, 1627
VspI	ATTAAT	2 cut(s)	1113, 1674
XagI	CCTNNNNNAGG	1 cut(s)	1785
XapI	RAATTY	5 cut(s)	460, 797, 1270, 1615, 1712
XceI	RCATGY	3 cut(s)	559, 563, 1147
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1627
XmiI	GTMKAC	1 cut(s)	1435
XmnI	GAANNNNTTC	2 cut(s)	1270, 1838
XspI	CTAG	1 cut(s)	518
ZrmI	AGTACT	1 cut(s)	702
Zsp2I	ATGCAT	1 cut(s)	561

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.