Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr3

Orthogroup ID

OG0000936

Physical Location & Seq

Genomic Coordinates Forward (+)

20686957 .. 20691934

Gene Structure 4978 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom03g20170.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2262 bp

ATGGATGTAACAGAAGTTACAGTGATACACCATGTGGGGATTGTGTTAATGGTGATCTGGTTTCTCTCTCACTTCAATTGCTGCCACCCAGTTGCCTACTTCATCTCTCTCATTTATCTCTACCTGGTTCATGAGCGGTATGTTATGAGATTGCGGAAGAAATTACAATTTGAGGAAAGAAAACAGGCTAATCAGAGAAGGGTACTTTCTGATTCTGAGACCGTGCGGTGGTTGAACCATGCAGTTGAAAAGATATGGCCTATATGTATGGAACAGATTGCTTCACAGAAAGTTCTCCTCCCTATCATACCTTGGTTTTTGGAGAAGTACAAACCGTGGACTGTTGGTAAAGCTATAGTACAGCATCTTTACTTGGGAAGAAACCCACCTATGTTCACCGAGATGAGAGTTCTTCGCCAATCTACTGATGATGACCACTTGGTTCTGGAGCTGGGGATGAATTTTCTGACAGCTGATGATATGCTTGGAATTCTAGCTGTGAAACTGAGGAAAAGACTAGGTTTTGGAATCTGGGCAAAGTTGCATATTACAGGCATGCATGTTGAAGGGAAGGTCCTGATTGGGGTGAGGTTCCTTTGCAAGTGGCCTTTCCTAGGCCGTGTGCGGTTATGCTTCGTTGAGCCTCCATATTTTCAAATGACTGTCAAGCCTATTTTCACTCATGGGCTTGATGTTACGGAACTCCCTGGGATTGATGGCTGGCTGGATAAGCTTCTCTCTGTTGCCTTCGAGCAGACACTTGTTCAGCCTAATATGCTGGTCGTTGACATGGAGAAATTTACTTCACCGGAACAGGAAAGCTGGTTCTCTGTGGATGAGAAGGATCCTGTTGCTTATGTGAGAGTAGAAGTTATTGAAGCATCTGACATGAAAGCCTCCGATCTAAATGGATTCGCTGACCCTTATGTGAAGGGTCATTTGGGTGTTTACCAATTCAAAACTAAGATACAAAAGAAAACGCTGACTCCAAAATGGCACGAGGAATTTAAGATCCCCATTATCACCTGGGATTCACCAAATGTGCTAGCTATTGAAGTTCAGGACAAGGACATATTTGTTGATGACACCCTTGGAGACTGTTCCATTAACATTGGCGATCTTAGGAATGGCGGGAGGCATGACATGTGGTTGCCTCTTCAGAAGGCTGGGAGGCTGCATCTTGCAGTAACCGTACTTGATGAAAATGGGAAGGAACAGAAAAATCTTCAGGGGCTTGACTTGAACCGCTTTCATACAAAGGGAGATGAGTCAGATGACTGTCCAGATGTTCAGGAAAAGCCAGATGTGGAAGAACGAAGAAATTCCTTTGCCTGTGACACTGGTAATAAAGGTTCCTTCTCATCTATATCGCCGGGGAAATCTCCTAAGGTAGCAGATCATTTTGAGCCGATTGATATTGATGGGCAGAAAGAGACTGGTATATGGGTCCATCACCCAGGAAATGAAGTTTCACAAACTTGGGAGGCCAGAAAAGGAAAGGGTCGACGACTTAATACCCAAATTCAAGGGGAGCCTAATGGTAGTGGCATTGGATCCCAAGTTAATGATACCAGCAGCACTGACGAGAATCCTGAAGATAAACGGCGAATGGCATCAGTTCGCAAGGGTCTGCATAAGATCGGTTCGGTGTTCCATAGGAATTCCAAGGAGGATAATTCATGCACCTTTAAAGAGCCACTTGAAACCCCACGCGTGAATCTAAGGGCAGTTAATGAAAATAATATTGGTGTGAAATTTGTTGTGGAAGACGGCCTTTGTAGCTCTCCTTCTGGCAAGGCAAATTCAAAAGGAGGGGCTTTAAGTTCTGGAGAGAGTGGTTCGGATAGCCCAGGAAAGGGCAATGTTAAAGACATGGCAAAGAGTCTCTACAAAAGTGCTGAAAGGTCGGTAAAGCGTGCACTTTCACGGAAAGGTTCTAGAAAGCCTCAAGCTGATCCCCGCGCAGTGAGTGAAAAAGAAATTTTAGCAGATTCGACCTCTTCTGATGACGATGTTTCTCTTCCGTCCCCATTTGTTGAAATGATACCAGTTCCCTCCAAGGCTATACCTTGCAGCTCCGATATTGATTCAGGTGTAACAGAGGAGCCCGTGGTTCAGCCGGTACCTGACACTGCAGTGGATGCTGAAGTCCCAGCGAAGAAGGTTGAACTTGGAGAACTCGAAAAAGTGGATGAGGAGCTGGACAGCCCTGGAAGAAGTGGCGATGCATTGTGCGAGCAGTCAAGAGTTGAAGCTAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0005886 GO:0012505 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00290 ko00650 ko00660 ko00770 ko01100 ko01110 ko01130 ko01210 ko01230 map00290 map00650 map00660 map00770 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

C2 SMP_LBD

Protein Analysis

754

Amino Acids

84.34

Weight (kDa)

5.85

Isoelectric Point (pI)

40.94

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000936)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53590 AT3G14590 AT3G14590 AT3G14590 AT3G14590 AT3G14590
fragaria_vesca	FvH4_3g16980 FvH4_3g16980 FvH4_3g16980 FvH4_3g16980 FvH4_3g16980 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020
malus_domestica	MD00G1185500.v1.1 MD00G1185600.v1.1 MD03G1254200.v1.1 MD03G1254900.v1.1 MD11G1275800.v1.1 MD11G1276000.v1.1
prunus_persica	Prupe.4G152200_v2.0.a1 Prupe.4G152200_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1
pyrus_communis	pycom03g20170 pycom03g20190 pycom11g24400
rosa_chinensis	RchiOBHm_Chr2g0135571 RchiOBHm_Chr2g0159501 RchiOBHm_Chr2g0159511 RchiOBHm_Chr5g0028301 RchiOBHm_Chr5g0028351 RchiOBHm_Chr5g0039631
rosa_laevigata	RLG00000033080 RLG00000033088
rosa_multiflora	Rmu_sc0001020.1_g000001 Rmu_sc0002481.1_g000040 Rmu_sc0008526.1_g000010
rosa_roxburghii	Rroxscaffold_1G00051350 Rroxscaffold_1G00051420 Rroxscaffold_1G00051430
rosa_rugosa	Rorug05G0105600
rosa_samantha	Rh1AG292900 Rh4AG059100 Rh5AG199100 Rh5AG199600 Rh5BG197700 Rh5BG198100 Rh5CG217400 Rh5CG218100 Rh5DG199400 Rh5DG200000 Rh7DG370100
rosa_wichuraiana	Rw4G016870 Rw5G018160 Rw5G018190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	2122
AccB1I	GGYRCC	1 cut(s)	2122
AccBSI	CCGCTC	1 cut(s)	136
AccI	GTMKAC	1 cut(s)	1504
AccII	CGCG	2 cut(s)	1713, 1962
AciI	CCGC	7 cut(s)	136, 154, 226, 625, 1131, 1246, 1960
AclWI	GGATC	6 cut(s)	839, 852, 1006, 1548, 1561, 1949
AcuI	CTGAAG	4 cut(s)	1142, 1211, 1614, 2166
AdeI	CACNNNGTG	1 cut(s)	34
AfaI	GTAC	5 cut(s)	204, 329, 360, 1194, 2124
AfiI	CCNNNNNNNGG	5 cut(s)	228, 583, 614, 1855, 1856
AflIII	ACRYGT	2 cut(s)	1143, 1711
AjnI	CCWGG	6 cut(s)	123, 706, 1025, 1456, 1849, 2209
AjuI	GAANNNNNNNTTGG	4 cut(s)	923, 955, 1728, 1760
AleI	CACNNNNGTG	1 cut(s)	2135
AloI	GAACNNNNNNTCC	2 cut(s)	809, 841
Alw21I	GWGCWC	1 cut(s)	1921
Alw26I	GTCTC	4 cut(s)	212, 1089, 1427, 1889
Alw44I	GTGCAC	1 cut(s)	1917
AlwI	GGATC	6 cut(s)	839, 852, 1006, 1548, 1561, 1949
AoxI	GGCC	5 cut(s)	257, 605, 616, 1485, 1771
ApaLI	GTGCAC	1 cut(s)	1917
ApeKI	GCWGC	4 cut(s)	81, 1174, 1575, 2073
Asp700I	GAANNNNTTC	1 cut(s)	1321
Asp718I	GGTACC	1 cut(s)	2122
AspA2I	CCTAGG	1 cut(s)	613
AspLEI	GCGC	1 cut(s)	1964
AspS9I	GGNCC	2 cut(s)	574, 1447
AsuC2I	CCSGG	1 cut(s)	1374
AsuHPI	GGTGA	7 cut(s)	64, 388, 598, 798, 1015, 1026, 1445
AsuNHI	GCTAGC	2 cut(s)	1045, 2255
AvaII	GGWCC	2 cut(s)	574, 1447
AvrII	CCTAGG	1 cut(s)	613
AxyI	CCTNAGG	1 cut(s)	1386
BaeGI	GKGCMC	1 cut(s)	1921
BamHI	GGATCC	2 cut(s)	844, 1553
BanI	GGYRCC	1 cut(s)	2122
BanII	GRGCYC	1 cut(s)	2109
BarI	GAAGNNNNNNTAC	2 cut(s)	1771, 1803
BauI	CACGAG	1 cut(s)	998
BbsI	GAAGAC	1 cut(s)	1773
Bbv12I	GWGCWC	1 cut(s)	1921
BbvI	GCAGC	4 cut(s)	68, 1161, 1587, 2085
BccI	CCATC	3 cut(s)	710, 1415, 1458
BceAI	ACGGC	3 cut(s)	603, 1619, 1786
BciT130I	CCWGG	6 cut(s)	125, 708, 1027, 1458, 1851, 2211
BcnI	CCSGG	1 cut(s)	1374
BcoDI	GTCTC	4 cut(s)	212, 1089, 1427, 1889
BfaI	CTAG	6 cut(s)	494, 518, 614, 1046, 1938, 2256
BfmI	CTRYAG	2 cut(s)	354, 2133
BisI	GCNGC	4 cut(s)	82, 1175, 1576, 2074
BlnI	CCTAGG	1 cut(s)	613
BlsI	GCNGC	4 cut(s)	83, 1176, 1577, 2075
Bme1390I	CCNGG	7 cut(s)	125, 708, 1027, 1374, 1458, 1851, 2211
Bme18I	GGWCC	2 cut(s)	574, 1447
BmgT120I	GGNCC	2 cut(s)	574, 1447
BmiI	GGNNCC	8 cut(s)	593, 846, 1354, 1448, 1533, 1555, 2106, 2124
BmrFI	CCNGG	7 cut(s)	125, 708, 1027, 1374, 1458, 1851, 2211
BmrI	ACTGGG	1 cut(s)	83
BmsI	GCATC	6 cut(s)	373, 890, 1186, 1622, 2131, 2215
BmtI	GCTAGC	2 cut(s)	1049, 2259
BmuI	ACTGGG	1 cut(s)	83
BpiI	GAAGAC	1 cut(s)	1773
BpmI	CTGGAG	2 cut(s)	467, 1848
BpuEI	CTTGAG	1 cut(s)	1932
BpuMI	CCSGG	1 cut(s)	1374
BsaI	GGTCTC	1 cut(s)	212
BsaWI	WCCGGW	1 cut(s)	808
BsaXI	ACNNNNNCTCC	2 cut(s)	970, 1000
Bsc4I	CCNNNNNNNGG	5 cut(s)	228, 583, 614, 1855, 1856
Bse118I	RCCGGY	1 cut(s)	2119
Bse1I	ACTGG	4 cut(s)	89, 1345, 1441, 2048
Bse21I	CCTNAGG	1 cut(s)	1386
Bse3DI	GCAATG	1 cut(s)	1867
BseBI	CCWGG	6 cut(s)	125, 708, 1027, 1458, 1851, 2211
BseGI	GGATG	5 cut(s)	10, 462, 841, 2146, 2197
BseLI	CCNNNNNNNGG	5 cut(s)	228, 583, 614, 1855, 1856
BseMI	GCAATG	1 cut(s)	1867
BseMII	CTCAG	2 cut(s)	207, 497
BseNI	ACTGG	4 cut(s)	89, 1345, 1441, 2048
BseRI	GAGGAG	3 cut(s)	287, 2117, 2210
BseSI	GKGCMC	1 cut(s)	1921
BseXI	GCAGC	4 cut(s)	68, 1161, 1587, 2085
BseYI	CCCAGC	3 cut(s)	451, 1166, 2152
Bsh1236I	CGCG	2 cut(s)	1713, 1962
BshFI	GGCC	5 cut(s)	259, 607, 618, 1487, 1773
BshNI	GGYRCC	1 cut(s)	2122
BsiHKAI	GWGCWC	1 cut(s)	1921
BsiSI	CCGG	3 cut(s)	809, 1373, 2120
BslFI	GGGAC	2 cut(s)	2011, 2135
BslI	CCNNNNNNNGG	5 cut(s)	228, 583, 614, 1855, 1856
BsmAI	GTCTC	4 cut(s)	212, 1089, 1427, 1889
BsmFI	GGGAC	2 cut(s)	2011, 2135
BsnI	GGCC	5 cut(s)	259, 607, 618, 1487, 1773
Bso31I	GGTCTC	1 cut(s)	212
Bsp1286I	GDGCHC	2 cut(s)	1921, 2109
Bsp143I	GATC	9 cut(s)	54, 844, 901, 1011, 1117, 1396, 1553, 1638, 1954
BspACI	CCGC	7 cut(s)	136, 154, 226, 625, 1131, 1246, 1960
BspANI	GGCC	5 cut(s)	259, 607, 618, 1487, 1773
BspCNI	CTCAG	2 cut(s)	208, 498
BspFNI	CGCG	2 cut(s)	1713, 1962
BspHI	TCATGA	1 cut(s)	130
BspLI	GGNNCC	8 cut(s)	593, 846, 1354, 1448, 1533, 1555, 2106, 2124
BspMAI	CTGCAG	1 cut(s)	2137
BspOI	GCTAGC	2 cut(s)	1049, 2259
BspPI	GGATC	6 cut(s)	839, 852, 1006, 1548, 1561, 1949
BspT107I	GGYRCC	1 cut(s)	2122
BspTNI	GGTCTC	1 cut(s)	212
BsrBI	CCGCTC	1 cut(s)	136
BsrDI	GCAATG	1 cut(s)	1867
BsrFI	RCCGGY	1 cut(s)	2119
BsrI	ACTGG	4 cut(s)	89, 1345, 1441, 2048
BssAI	RCCGGY	1 cut(s)	2119
BssMI	GATC	9 cut(s)	54, 844, 901, 1011, 1117, 1396, 1553, 1638, 1954
BssSI	CACGAG	1 cut(s)	998
BssT1I	CCWWGG	5 cut(s)	311, 613, 1090, 1665, 2058
Bst2BI	CACGAG	1 cut(s)	998
Bst2UI	CCWGG	6 cut(s)	125, 708, 1027, 1458, 1851, 2211
Bst4CI	ACNGT	8 cut(s)	22, 223, 336, 343, 664, 1100, 1192, 1280
Bst6I	CTCTTC	3 cut(s)	1161, 2005, 2025
BstAPI	GCANNNNNTGC	1 cut(s)	2141
BstC8I	GCNNGC	6 cut(s)	557, 722, 1047, 1917, 2237, 2257
BstDEI	CTNAG	6 cut(s)	216, 506, 963, 1121, 1386, 1721
BstDSI	CCRYGG	2 cut(s)	335, 2109
BstENI	CCTNNNNNAGG	1 cut(s)	612
BstF5I	GGATG	5 cut(s)	10, 462, 841, 2146, 2197
BstFNI	CGCG	2 cut(s)	1713, 1962
BstHHI	GCGC	1 cut(s)	1964
BstKTI	GATC	9 cut(s)	57, 847, 904, 1014, 1120, 1399, 1556, 1641, 1957
BstMAI	GTCTC	4 cut(s)	212, 1089, 1427, 1889
BstMBI	GATC	9 cut(s)	54, 844, 901, 1011, 1117, 1396, 1553, 1638, 1954
BstMWI	GCNNNNNNNGC	4 cut(s)	730, 775, 1779, 2141
BstNI	CCWGG	6 cut(s)	125, 708, 1027, 1458, 1851, 2211
BstNSI	RCATGY	3 cut(s)	559, 563, 1147
BstSCI	CCNGG	7 cut(s)	123, 706, 1025, 1372, 1456, 1849, 2209
BstSFI	CTRYAG	2 cut(s)	354, 2133
BstSLI	GKGCMC	1 cut(s)	1921
BstUI	CGCG	2 cut(s)	1713, 1962
BstV1I	GCAGC	4 cut(s)	68, 1161, 1587, 2085
BstV2I	GAAGAC	1 cut(s)	1773
BstX2I	RGATCY	3 cut(s)	844, 1011, 1553
BstYI	RGATCY	3 cut(s)	844, 1011, 1553
Bsu36I	CCTNAGG	1 cut(s)	1386
BsuRI	GGCC	5 cut(s)	259, 607, 618, 1487, 1773
BtgI	CCRYGG	2 cut(s)	335, 2109
BtgZI	GCGATG	1 cut(s)	2238
BtsCI	GGATG	5 cut(s)	10, 462, 841, 2146, 2197
BtsI	GCAGTG	3 cut(s)	1971, 2130, 2142
BtsIMutI	CAGTG	6 cut(s)	27, 1338, 1578, 1971, 2130, 2142
Cac8I	GCNNGC	6 cut(s)	557, 722, 1047, 1917, 2237, 2257
CciI	TCATGA	1 cut(s)	130
CfoI	GCGC	1 cut(s)	1964
Cfr10I	RCCGGY	1 cut(s)	2119
Cfr13I	GGNCC	2 cut(s)	574, 1447
CsiI	ACCWGGT	1 cut(s)	123
Csp6I	GTAC	5 cut(s)	203, 328, 359, 1193, 2123
CviQI	GTAC	5 cut(s)	203, 328, 359, 1193, 2123
DdeI	CTNAG	6 cut(s)	216, 506, 963, 1121, 1386, 1721
DpnI	GATC	9 cut(s)	56, 846, 903, 1013, 1119, 1398, 1555, 1640, 1956
DpnII	GATC	9 cut(s)	54, 844, 901, 1011, 1117, 1396, 1553, 1638, 1954
DraI	TTTAAA	1 cut(s)	1690
DraIII	CACNNNGTG	1 cut(s)	34
Eam1104I	CTCTTC	3 cut(s)	1161, 2005, 2025
EarI	CTCTTC	3 cut(s)	1161, 2005, 2025
Eco130I	CCWWGG	5 cut(s)	311, 613, 1090, 1665, 2058
Eco24I	GRGCYC	1 cut(s)	2109
Eco31I	GGTCTC	1 cut(s)	212
Eco47I	GGWCC	2 cut(s)	574, 1447
Eco57I	CTGAAG	4 cut(s)	1142, 1211, 1614, 2166
Eco81I	CCTNAGG	1 cut(s)	1386
EcoNI	CCTNNNNNAGG	1 cut(s)	612
EcoO109I	RGGNCCY	1 cut(s)	574
EcoRI	GAATTC	2 cut(s)	489, 1660
EcoRII	CCWGG	6 cut(s)	123, 706, 1025, 1456, 1849, 2209
EcoT14I	CCWWGG	5 cut(s)	311, 613, 1090, 1665, 2058
EcoT22I	ATGCAT	2 cut(s)	561, 2230
EcoT38I	GRGCYC	1 cut(s)	2109
ErhI	CCWWGG	5 cut(s)	311, 613, 1090, 1665, 2058
FalI	AAGNNNNNCTT	4 cut(s)	1683, 1715, 1758, 1790
FaqI	GGGAC	2 cut(s)	2011, 2135
FauI	CCCGC	2 cut(s)	1124, 1967
FblI	GTMKAC	1 cut(s)	1504
Fnu4HI	GCNGC	4 cut(s)	82, 1175, 1576, 2074
FokI	GGATG	5 cut(s)	17, 469, 848, 2153, 2204
FriOI	GRGCYC	1 cut(s)	2109
Fsp4HI	GCNGC	4 cut(s)	82, 1175, 1576, 2074
FspBI	CTAG	6 cut(s)	494, 518, 614, 1046, 1938, 2256
GlaI	GCGC	1 cut(s)	1963
GluI	GCNGC	4 cut(s)	82, 1175, 1576, 2074
GsaI	CCCAGC	3 cut(s)	455, 1170, 2156
GsuI	CTGGAG	2 cut(s)	467, 1848
HaeIII	GGCC	5 cut(s)	259, 607, 618, 1487, 1773
HapII	CCGG	3 cut(s)	809, 1373, 2120
HhaI	GCGC	1 cut(s)	1964
Hin6I	GCGC	1 cut(s)	1962
HinP1I	GCGC	1 cut(s)	1962
HincII	GTYRAC	2 cut(s)	787, 1505
HindII	GTYRAC	2 cut(s)	787, 1505
HindIII	AAGCTT	1 cut(s)	731
HpaII	CCGG	3 cut(s)	809, 1373, 2120
HphI	GGTGA	7 cut(s)	64, 388, 598, 798, 1015, 1026, 1445
Hpy166II	GTNNAC	6 cut(s)	339, 396, 787, 949, 1505, 1919
Hpy8I	GTNNAC	6 cut(s)	339, 396, 787, 949, 1505, 1919
Hpy99I	CGWCG	1 cut(s)	1509
HpyCH4III	ACNGT	8 cut(s)	22, 223, 336, 343, 664, 1100, 1192, 1280
HpyF10VI	GCNNNNNNNGC	4 cut(s)	730, 775, 1779, 2141
HpyF3I	CTNAG	6 cut(s)	216, 506, 963, 1121, 1386, 1721
HspAI	GCGC	1 cut(s)	1962
KpnI	GGTACC	1 cut(s)	2126
Kzo9I	GATC	9 cut(s)	54, 844, 901, 1011, 1117, 1396, 1553, 1638, 1954
LmnI	GCTCC	5 cut(s)	448, 1531, 2081, 2104, 2197
Lsp1109I	GCAGC	4 cut(s)	68, 1161, 1587, 2085
LweI	GCATC	6 cut(s)	373, 890, 1186, 1622, 2131, 2215
MabI	ACCWGGT	1 cut(s)	123
MaeI	CTAG	6 cut(s)	494, 518, 614, 1046, 1938, 2256
MaeIII	GTNAC	6 cut(s)	7, 16, 694, 1186, 1334, 2095
MalI	GATC	9 cut(s)	56, 846, 903, 1013, 1119, 1398, 1555, 1640, 1956
MbiI	CCGCTC	1 cut(s)	136
MboI	GATC	9 cut(s)	54, 844, 901, 1011, 1117, 1396, 1553, 1638, 1954
MfeI	CAATTG	1 cut(s)	76
MflI	RGATCY	3 cut(s)	844, 1011, 1553
MhlI	GDGCHC	2 cut(s)	1921, 2109
MluI	ACGCGT	1 cut(s)	1711
MlyI	GAGTC	3 cut(s)	979, 1277, 1891
Mph1103I	ATGCAT	2 cut(s)	561, 2230
MroXI	GAANNNNTTC	1 cut(s)	1321
MseI	TTAA	9 cut(s)	47, 1008, 1107, 1512, 1563, 1689, 1731, 1820, 1866
MslI	CAYNNNNRTG	3 cut(s)	401, 942, 2135
MspA1I	CMGCKG	1 cut(s)	473
MspI	CCGG	3 cut(s)	809, 1373, 2120
MspR9I	CCNGG	7 cut(s)	125, 708, 1027, 1374, 1458, 1851, 2211
MunI	CAATTG	1 cut(s)	76
MvaI	CCWGG	6 cut(s)	125, 708, 1027, 1458, 1851, 2211
MvnI	CGCG	2 cut(s)	1713, 1962
MwoI	GCNNNNNNNGC	4 cut(s)	730, 775, 1779, 2141
NciI	CCSGG	1 cut(s)	1374
NdeII	GATC	9 cut(s)	54, 844, 901, 1011, 1117, 1396, 1553, 1638, 1954
NheI	GCTAGC	2 cut(s)	1045, 2255
NlaIV	GGNNCC	8 cut(s)	593, 846, 1354, 1448, 1533, 1555, 2106, 2124
NmuCI	GTSAC	1 cut(s)	1334
NsiI	ATGCAT	2 cut(s)	561, 2230
NspI	RCATGY	3 cut(s)	559, 563, 1147
OliI	CACNNNNGTG	1 cut(s)	2135
PaeI	GCATGC	1 cut(s)	559
PagI	TCATGA	1 cut(s)	130
PasI	CCCWGGG	1 cut(s)	707
PciI	ACATGT	1 cut(s)	1143
PdmI	GAANNNNTTC	1 cut(s)	1321
PfeI	GAWTC	8 cut(s)	212, 528, 912, 1031, 1588, 1717, 1991, 2087
PkrI	GCNGC	4 cut(s)	83, 1176, 1577, 2075
PleI	GAGTC	3 cut(s)	979, 1276, 1890
PpsI	GAGTC	3 cut(s)	979, 1276, 1890
PpuMI	RGGWCCY	1 cut(s)	574
PscI	ACATGT	1 cut(s)	1143
Psp5II	RGGWCCY	1 cut(s)	574
Psp6I	CCWGG	6 cut(s)	123, 706, 1025, 1456, 1849, 2209
PspFI	CCCAGC	3 cut(s)	451, 1166, 2152
PspGI	CCWGG	6 cut(s)	123, 706, 1025, 1456, 1849, 2209
PspN4I	GGNNCC	8 cut(s)	593, 846, 1354, 1448, 1533, 1555, 2106, 2124
PspPI	GGNCC	2 cut(s)	574, 1447
PspPPI	RGGWCCY	1 cut(s)	574
PsrI	GAACNNNNNNTAC	2 cut(s)	1336, 1368
PstI	CTGCAG	1 cut(s)	2137
PsuI	RGATCY	3 cut(s)	844, 1011, 1553
PvuII	CAGCTG	1 cut(s)	473
RsaI	GTAC	5 cut(s)	204, 329, 360, 1194, 2124
RsaNI	GTAC	5 cut(s)	203, 328, 359, 1193, 2123
RseI	CAYNNNNRTG	3 cut(s)	401, 942, 2135
SalI	GTCGAC	1 cut(s)	1503
SaqAI	TTAA	9 cut(s)	47, 1008, 1107, 1512, 1563, 1689, 1731, 1820, 1866
SatI	GCNGC	4 cut(s)	82, 1175, 1576, 2074
Sau3AI	GATC	9 cut(s)	54, 844, 901, 1011, 1117, 1396, 1553, 1638, 1954
Sau96I	GGNCC	2 cut(s)	574, 1447
SchI	GAGTC	3 cut(s)	979, 1277, 1891
ScrFI	CCNGG	7 cut(s)	125, 708, 1027, 1374, 1458, 1851, 2211
SduI	GDGCHC	2 cut(s)	1921, 2109
SexAI	ACCWGGT	1 cut(s)	123
SfaNI	GCATC	6 cut(s)	373, 890, 1186, 1622, 2131, 2215
SfcI	CTRYAG	2 cut(s)	354, 2133
SinI	GGWCC	2 cut(s)	574, 1447
SmiMI	CAYNNNNRTG	3 cut(s)	401, 942, 2135
SmlI	CTYRAG	1 cut(s)	1947
SmoI	CTYRAG	1 cut(s)	1947
SphI	GCATGC	1 cut(s)	559
SsiI	CCGC	7 cut(s)	136, 154, 226, 625, 1131, 1246, 1960
SspI	AATATT	1 cut(s)	1744
SspMI	CTAG	6 cut(s)	494, 518, 614, 1046, 1938, 2256
StyD4I	CCNGG	7 cut(s)	123, 706, 1025, 1372, 1456, 1849, 2209
StyI	CCWWGG	5 cut(s)	311, 613, 1090, 1665, 2058
TaaI	ACNGT	8 cut(s)	22, 223, 336, 343, 664, 1100, 1192, 1280
TaqI	TCGA	4 cut(s)	750, 1504, 1994, 2181
TatI	WGTACW	2 cut(s)	327, 358
TfiI	GAWTC	8 cut(s)	212, 528, 912, 1031, 1588, 1717, 1991, 2087
Tru1I	TTAA	9 cut(s)	47, 1008, 1107, 1512, 1563, 1689, 1731, 1820, 1866
Tru9I	TTAA	9 cut(s)	47, 1008, 1107, 1512, 1563, 1689, 1731, 1820, 1866
TscAI	CASTG	6 cut(s)	27, 1345, 1585, 1971, 2137, 2142
TseFI	GTSAC	1 cut(s)	1334
TseI	GCWGC	4 cut(s)	81, 1174, 1575, 2073
Tsp45I	GTSAC	1 cut(s)	1334
TspDTI	ATGAA	9 cut(s)	91, 119, 473, 905, 1215, 1241, 1479, 1668, 1749
TspGWI	ACGGA	3 cut(s)	713, 1942, 2013
TspRI	CASTG	6 cut(s)	27, 1345, 1585, 1971, 2137, 2142
VneI	GTGCAC	1 cut(s)	1917
VpaK11BI	GGWCC	2 cut(s)	574, 1447
XagI	CCTNNNNNAGG	1 cut(s)	612
XbaI	TCTAGA	1 cut(s)	1937
XceI	RCATGY	3 cut(s)	559, 563, 1147
XmaJI	CCTAGG	1 cut(s)	613
XmiI	GTMKAC	1 cut(s)	1504
XmnI	GAANNNNTTC	1 cut(s)	1321
XspI	CTAG	6 cut(s)	494, 518, 614, 1046, 1938, 2256
Zsp2I	ATGCAT	2 cut(s)	561, 2230

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.