Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0000936

Physical Location & Seq

Genomic Coordinates Reverse (-)

23511867 .. 23518242

Gene Structure 6376 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG199600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2193 bp

ATGGATATTACAGAGGTCACACTGATACACCATGTGGGTCTTGTGTTAGCTCTGCTTTGGTTGCTCTCTCACTACAATTGCTGCCACGCATTGGCATACTTTCTCTCTCTGATTTATCTCTTTGTGGTTCATGAGCGGTATGTTATGCGACTGCGGAAAAAACTACAATTCGAGGAAAGAAAGCAGGGGAATCAGAGAAGGGTACTTTCTGATTCTGAAACAGTGCGTTGGTTGAACCATGCAGTTGAAAAGATATGGCCTATATGTATGGAACAGATTGCTTCCCAGAGAATTCTCCTCCCCATCATACCTTGGTTTTTGGAGAAGTACAAACCATGGACTGTTAGTAAAGGTGTAGTTCAGCACCTTTATTTGGGAAGGAACGCACCCATGTTCACAGAGATGAGAGTTCTCCGCCAGTCTACTGGTGATGACCATTTGGTTCTGGAGTTGGGAATGAATTTTCTGACAGCTGATGATATGCTTGGAATACTTGCTGTCAAGCTAAAAAAAAGGCTGGGCTTTGGAATTTGGGCAAAATTGCATATTACCGGTATGCATGTTGAAGGGAAGGTCATGATTGGGGTGAAGTTCCTTCGCAAGTGGCCTTTCCTTGGCCGTGTGCGGTTATGCTTTGTCGAGCCTCCATATTTTCAAATGACCGTCAAGCCTATTTTTACTCGTGGGCTTGATGTTACAGAAGTCCCAGGGATTGATGGATGGCTGGATAAGCTTCTCTCAATTGCCTTTGAGCAGACACTTGTTCAGCCTAATATGCTGGTTGTTGACATGGAGAAATTCACTTCACCAGAACAGGAAAATTGGTTTTCTGTGGATGAGAAGGAGCCTGTTGGGCATCTCAAAGTAGAAGTTATTGAAGCATCTGACATGAAAGCCTCCGACTTAAATGGATTTTCTGACCCTTATGTGAAGGGCCAATTCGGCGTTTACCAATTCAAAACTAAGATACAAAAGAAAACGCTGACCCCAAAATGGTTTGAGGAATTTAAGATCCCGATCATCACATGGGATTCACCTAATGTGCTAGCTATTGAAGTTCATGACAGAGACATTTTTGTTGATGATACCCTTGGAAACTGTTCCATTAACATCGGTGACCTTAGGGATGGTGTGAGACATGACATGTGGTTGCCTCTTCAGAACATCAAAACAGCAGGGAGGCTGCATCTTGCAGTAACTGTACTTGAAGACAATGGAGAGAGCAGTGATCCTCCAGATGTTCGGGAATCGAAAATGCCAAATATGGAAGATAAAAGAAATTCCTTTTCCAGTGAGACTGGTAATAAAAATTCCTTCTCGTCTGTCTCATCTGAGAAATCTCCTAGTGTGGCAGATAATTATGAGCCCATTGATGTTGAAGGGCAAAAAGAAACTGGTATATGGGTCCATCACCCAGGAAGTGAAGTTTCACAAACATGGGAGGCTAGAAAAGGAAAGGGTCGACGTCTTAGTACCCAAATTCAAGGGGAGCCTAATGGGAGCAGCGTCACTGATGAAACTCAGGATGACAAACATCCAATGCAATCAGTTCGCCGGGGTCTACGTAAACTTGGTTCAGTATTTCAGAAGAATCCCAAAAAGGAGGATAATTCATGCAGTTTTACAGAGTCTGTCCAGAGCCCAGTTACTCCACGTGTCAATCTGAGGGCAATTAATGAAAAGGACATTGCGGTAAAATATGTTGTGGAAGATGAAATTTCTGGTAAAGTTTCAAAAGAAGGGGCTTCAAGTTCTGGAGAGAGTAGCTCAGGTAGCCCAGGAAAGGGCAAGGTGAAAGGCATGGCAAAGAGTTTCTTTAAACATGCTGAAAGATCGGTAAAGCATGCACTTTCACGTAAAGGTTCTAGAAAGTCACAGACAGATTCTTGTGAAAGAGAAATTATAGCAGATTCCGACTCTTCTGACGATGATGATACTCCTCCCCCCCCAATAGTTGAAATGATACCAGTTGTCTCCAGGGACATACCTCATCCCCCTGTTAATGATTCGGTCAAGTCAGATGAGCATTTGACTCGGCCACTTCCAAGTGCTCTAAGTAATATTCCAGAGGACACTGAGGATTCAGTGAAGAAGGTTGAACCTGAAGACACAGAAAAGACGCTTGAGAAGCCGGATGACCCTGAAAAAAATAACGAGGGATTGCCTGAGCCGTTAAAAGTTGAAGCCAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005783 GO:0005886 GO:0012505 GO:0016020 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

ko00290 ko00650 ko00660 ko00770 ko01100 ko01110 ko01130 ko01210 ko01230 map00290 map00650 map00660 map00770 map01100 map01110 map01130 map01210 map01230

Pfam Domains

Protein Families

C2 SMP_LBD

Protein Analysis

730

Amino Acids

82.54

Weight (kDa)

6.02

Isoelectric Point (pI)

41.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SMP_MUG190-like	PF25669	175 - 267	2.8e-09	MUG190-like SMP domain
C2	PF00168	285 - 386	1.8e-20	C2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000936)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53590 AT3G14590 AT3G14590 AT3G14590 AT3G14590 AT3G14590
fragaria_vesca	FvH4_3g16980 FvH4_3g16980 FvH4_3g16980 FvH4_3g16980 FvH4_3g16980 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020 FvH4_3g17020
malus_domestica	MD00G1185500.v1.1 MD00G1185600.v1.1 MD03G1254200.v1.1 MD03G1254900.v1.1 MD11G1275800.v1.1 MD11G1276000.v1.1
prunus_persica	Prupe.4G152200_v2.0.a1 Prupe.4G152200_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1 Prupe.4G152300_v2.0.a1
pyrus_communis	pycom03g20170 pycom03g20190 pycom11g24400
rosa_chinensis	RchiOBHm_Chr2g0135571 RchiOBHm_Chr2g0159501 RchiOBHm_Chr2g0159511 RchiOBHm_Chr5g0028301 RchiOBHm_Chr5g0028351 RchiOBHm_Chr5g0039631
rosa_laevigata	RLG00000033080 RLG00000033088
rosa_multiflora	Rmu_sc0001020.1_g000001 Rmu_sc0002481.1_g000040 Rmu_sc0008526.1_g000010
rosa_roxburghii	Rroxscaffold_1G00051350 Rroxscaffold_1G00051420 Rroxscaffold_1G00051430
rosa_rugosa	Rorug05G0105600
rosa_samantha	Rh1AG292900 Rh4AG059100 Rh5AG199100 Rh5AG199600 Rh5BG197700 Rh5BG198100 Rh5CG217400 Rh5CG218100 Rh5DG199400 Rh5DG200000 Rh7DG370100
rosa_wichuraiana	Rw4G016870 Rw5G018160 Rw5G018190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1468
AccB7I	CCANNNNNTGG	1 cut(s)	91
AccBSI	CCGCTC	1 cut(s)	136
AccI	GTMKAC	3 cut(s)	422, 1462, 1561
AciI	CCGC	5 cut(s)	136, 154, 415, 625, 1691
AclWI	GGATC	2 cut(s)	1006, 1223
AcoI	YGGCCR	2 cut(s)	616, 2036
AcsI	RAATTY	9 cut(s)	291, 460, 528, 797, 1004, 1279, 1309, 1479, 1716
AcuI	CTGAAG	2 cut(s)	1142, 2124
AcvI	CACGTG	1 cut(s)	1655
AcyI	GRCGYC	1 cut(s)	1465
AdeI	CACNNNGTG	1 cut(s)	34
AfaI	GTAC	4 cut(s)	204, 329, 1203, 1474
AfiI	CCNNNNNNNGG	6 cut(s)	91, 373, 614, 993, 1783, 1784
AflIII	ACRYGT	2 cut(s)	1143, 1654
AgeI	ACCGGT	1 cut(s)	551
AjnI	CCWGG	5 cut(s)	706, 1414, 1777, 1976, 2186
AluBI	AGCT	6 cut(s)	50, 473, 505, 733, 1049, 1767
AluI	AGCT	6 cut(s)	50, 473, 505, 733, 1049, 1767
Alw21I	GWGCWC	1 cut(s)	2053
Alw26I	GTCTC	5 cut(s)	1062, 1129, 1289, 1330, 1978
AlwI	GGATC	2 cut(s)	1006, 1223
AlwNI	CAGNNNCTG	2 cut(s)	1199, 1631
AoxI	GGCC	5 cut(s)	257, 605, 616, 934, 2036
ApeKI	GCWGC	3 cut(s)	81, 1183, 1503
ApoI	RAATTY	9 cut(s)	291, 460, 528, 797, 1004, 1279, 1309, 1479, 1716
AseI	ATTAAT	1 cut(s)	1674
AsiGI	ACCGGT	1 cut(s)	551
Asp700I	GAANNNNTTC	1 cut(s)	1099
AspS9I	GGNCC	2 cut(s)	934, 1405
AsuC2I	CCSGG	1 cut(s)	1556
AsuHPI	GGTGA	7 cut(s)	440, 598, 798, 1026, 1127, 1403, 1804
AsuNHI	GCTAGC	1 cut(s)	1045
AvaII	GGWCC	1 cut(s)	1405
AxyI	CCTNAGG	1 cut(s)	1121
BanII	GRGCYC	2 cut(s)	1368, 1643
BauI	CACGAG	1 cut(s)	681
BbrPI	CACGTG	1 cut(s)	1655
BbsI	GAAGAC	2 cut(s)	1215, 2112
Bbv12I	GWGCWC	1 cut(s)	2053
BbvI	GCAGC	3 cut(s)	68, 1170, 1515
BccI	CCATC	5 cut(s)	311, 710, 714, 1121, 1416
BceAI	ACGGC	2 cut(s)	603, 2155
BcgI	CGANNNNNNTGC	4 cut(s)	1532, 1566, 2015, 2049
BciT130I	CCWGG	5 cut(s)	708, 1416, 1779, 1978, 2188
BcnI	CCSGG	1 cut(s)	1556
BcoDI	GTCTC	5 cut(s)	1062, 1129, 1289, 1330, 1978
BfaI	CTAG	4 cut(s)	1046, 1344, 1446, 1866
BglI	GCCNNNNNGGC	2 cut(s)	853, 942
BisI	GCNGC	3 cut(s)	82, 1184, 1504
BlsI	GCNGC	3 cut(s)	83, 1185, 1505
Bme1390I	CCNGG	6 cut(s)	708, 1416, 1556, 1779, 1978, 2188
Bme18I	GGWCC	1 cut(s)	1405
BmgT120I	GGNCC	2 cut(s)	934, 1405
BmiI	GGNNCC	3 cut(s)	846, 1406, 1491
BmrFI	CCNGG	6 cut(s)	708, 1416, 1556, 1779, 1978, 2188
BmrI	ACTGGG	1 cut(s)	1637
BmsI	GCATC	3 cut(s)	865, 890, 1195
BmtI	GCTAGC	1 cut(s)	1049
BmuI	ACTGGG	1 cut(s)	1637
BpiI	GAAGAC	2 cut(s)	1215, 2112
BplI	GAGNNNNNCTC	2 cut(s)	1751, 1783
BpmI	CTGGAG	4 cut(s)	467, 1218, 1776, 1960
Bpu10I	CCTNAGC	2 cut(s)	1768, 2166
BpuEI	CTTGAG	1 cut(s)	2144
BpuMI	CCSGG	1 cut(s)	1556
BsaAI	YACGTR	3 cut(s)	1565, 1655, 1856
BsaBI	GATNNNNATC	1 cut(s)	1016
BsaHI	GRCGYC	1 cut(s)	1465
BsaWI	WCCGGW	1 cut(s)	551
Bsc4I	CCNNNNNNNGG	6 cut(s)	91, 373, 614, 993, 1783, 1784
Bse118I	RCCGGY	1 cut(s)	551
Bse1I	ACTGG	7 cut(s)	418, 430, 1290, 1303, 1399, 1643, 1967
Bse21I	CCTNAGG	1 cut(s)	1121
Bse3DI	GCAATG	1 cut(s)	1686
Bse8I	GATNNNNATC	1 cut(s)	1016
BseBI	CCWGG	5 cut(s)	708, 1416, 1779, 1978, 2188
BseGI	GGATG	7 cut(s)	725, 841, 1132, 1531, 1534, 1990, 2140
BseJI	GATNNNNATC	1 cut(s)	1016
BseLI	CCNNNNNNNGG	6 cut(s)	91, 373, 614, 993, 1783, 1784
BseMI	GCAATG	1 cut(s)	1686
BseMII	CTCAG	6 cut(s)	1323, 1535, 1655, 1782, 2067, 2157
BseNI	ACTGG	7 cut(s)	418, 430, 1290, 1303, 1399, 1643, 1967
BseRI	GAGGAG	2 cut(s)	287, 1929
BseXI	GCAGC	3 cut(s)	68, 1170, 1515
BseYI	CCCAGC	1 cut(s)	517
BshFI	GGCC	5 cut(s)	259, 607, 618, 936, 2038
BshTI	ACCGGT	1 cut(s)	551
BsiHKAI	GWGCWC	1 cut(s)	2053
BsiSI	CCGG	3 cut(s)	552, 1555, 2132
BslFI	GGGAC	2 cut(s)	689, 1994
BslI	CCNNNNNNNGG	6 cut(s)	91, 373, 614, 993, 1783, 1784
BsmAI	GTCTC	5 cut(s)	1062, 1129, 1289, 1330, 1978
BsmFI	GGGAC	2 cut(s)	689, 1994
BsnI	GGCC	5 cut(s)	259, 607, 618, 936, 2038
Bsp1286I	GDGCHC	3 cut(s)	1368, 1643, 2053
Bsp143I	GATC	4 cut(s)	1011, 1017, 1228, 1832
Bsp19I	CCATGG	1 cut(s)	335
BspACI	CCGC	5 cut(s)	136, 154, 415, 625, 1691
BspANI	GGCC	5 cut(s)	259, 607, 618, 936, 2038
BspCNI	CTCAG	6 cut(s)	1324, 1534, 1656, 1781, 2068, 2158
BspHI	TCATGA	3 cut(s)	130, 576, 1060
BspLI	GGNNCC	3 cut(s)	846, 1406, 1491
BspOI	GCTAGC	1 cut(s)	1049
BspPI	GGATC	2 cut(s)	1006, 1223
BsrBI	CCGCTC	1 cut(s)	136
BsrDI	GCAATG	1 cut(s)	1686
BsrFI	RCCGGY	1 cut(s)	551
BsrI	ACTGG	7 cut(s)	418, 430, 1290, 1303, 1399, 1643, 1967
BssAI	RCCGGY	1 cut(s)	551
BssMI	GATC	4 cut(s)	1011, 1017, 1228, 1832
BssNI	GRCGYC	1 cut(s)	1465
BssSI	CACGAG	1 cut(s)	681
BssT1I	CCWWGG	4 cut(s)	311, 335, 613, 1090
Bst2BI	CACGAG	1 cut(s)	681
Bst2UI	CCWGG	5 cut(s)	708, 1416, 1779, 1978, 2188
Bst4CI	ACNGT	5 cut(s)	223, 343, 664, 1100, 1201
Bst6I	CTCTTC	2 cut(s)	1161, 1924
BstACI	GRCGYC	1 cut(s)	1465
BstBAI	YACGTR	3 cut(s)	1565, 1655, 1856
BstC8I	GCNNGC	2 cut(s)	1047, 1845
BstDSI	CCRYGG	1 cut(s)	335
BstEII	GGTNACC	1 cut(s)	1115
BstF5I	GGATG	7 cut(s)	725, 841, 1132, 1531, 1534, 1990, 2140
BstKTI	GATC	4 cut(s)	1014, 1020, 1231, 1835
BstMAI	GTCTC	5 cut(s)	1062, 1129, 1289, 1330, 1978
BstMBI	GATC	4 cut(s)	1011, 1017, 1228, 1832
BstMWI	GCNNNNNNNGC	7 cut(s)	61, 730, 775, 853, 942, 1773, 2128
BstNI	CCWGG	5 cut(s)	708, 1416, 1779, 1978, 2188
BstNSI	RCATGY	4 cut(s)	563, 1147, 1826, 1847
BstPI	GGTNACC	1 cut(s)	1115
BstSCI	CCNGG	6 cut(s)	706, 1414, 1554, 1777, 1976, 2186
BstSNI	TACGTA	1 cut(s)	1565
BstV1I	GCAGC	3 cut(s)	68, 1170, 1515
BstV2I	GAAGAC	2 cut(s)	1215, 2112
BstX2I	RGATCY	1 cut(s)	1011
BstXI	CCANNNNNNTGG	1 cut(s)	425
BstYI	RGATCY	1 cut(s)	1011
Bsu36I	CCTNAGG	1 cut(s)	1121
BsuRI	GGCC	5 cut(s)	259, 607, 618, 936, 2038
BtgI	CCRYGG	1 cut(s)	335
BtsCI	GGATG	7 cut(s)	725, 841, 1132, 1531, 1534, 1990, 2140
BtsI	GCAGTG	1 cut(s)	1231
BtsIMutI	CAGTG	7 cut(s)	20, 228, 1231, 1297, 1509, 2073, 2091
Cac8I	GCNNGC	2 cut(s)	1047, 1845
CaiI	CAGNNNCTG	2 cut(s)	1199, 1631
CciI	TCATGA	3 cut(s)	130, 576, 1060
Cfr10I	RCCGGY	1 cut(s)	551
Cfr13I	GGNCC	2 cut(s)	934, 1405
CseI	GACGC	2 cut(s)	1495, 2128
Csp6I	GTAC	4 cut(s)	203, 328, 1202, 1473
CspAI	ACCGGT	1 cut(s)	551
CviQI	GTAC	4 cut(s)	203, 328, 1202, 1473
DpnI	GATC	4 cut(s)	1013, 1019, 1230, 1834
DpnII	GATC	4 cut(s)	1011, 1017, 1228, 1832
DraI	TTTAAA	1 cut(s)	1819
DraIII	CACNNNGTG	1 cut(s)	34
EaeI	YGGCCR	2 cut(s)	616, 2036
Eam1104I	CTCTTC	2 cut(s)	1161, 1924
EarI	CTCTTC	2 cut(s)	1161, 1924
EciI	GGCGGA	1 cut(s)	404
Eco105I	TACGTA	1 cut(s)	1565
Eco130I	CCWWGG	4 cut(s)	311, 335, 613, 1090
Eco24I	GRGCYC	2 cut(s)	1368, 1643
Eco47I	GGWCC	1 cut(s)	1405
Eco57I	CTGAAG	2 cut(s)	1142, 2124
Eco72I	CACGTG	1 cut(s)	1655
Eco81I	CCTNAGG	1 cut(s)	1121
Eco91I	GGTNACC	1 cut(s)	1115
EcoO65I	GGTNACC	1 cut(s)	1115
EcoRI	GAATTC	1 cut(s)	291
EcoRII	CCWGG	5 cut(s)	706, 1414, 1777, 1976, 2186
EcoT14I	CCWWGG	4 cut(s)	311, 335, 613, 1090
EcoT22I	ATGCAT	1 cut(s)	561
EcoT38I	GRGCYC	2 cut(s)	1368, 1643
ErhI	CCWWGG	4 cut(s)	311, 335, 613, 1090
FalI	AAGNNNNNCTT	2 cut(s)	1799, 1831
FaqI	GGGAC	2 cut(s)	689, 1994
FblI	GTMKAC	3 cut(s)	422, 1462, 1561
Fnu4HI	GCNGC	3 cut(s)	82, 1184, 1504
FokI	GGATG	7 cut(s)	732, 848, 1139, 1521, 1538, 1977, 2147
FriOI	GRGCYC	2 cut(s)	1368, 1643
Fsp4HI	GCNGC	3 cut(s)	82, 1184, 1504
FspBI	CTAG	4 cut(s)	1046, 1344, 1446, 1866
GluI	GCNGC	3 cut(s)	82, 1184, 1504
GsaI	CCCAGC	1 cut(s)	521
GsuI	CTGGAG	4 cut(s)	467, 1218, 1776, 1960
HaeIII	GGCC	5 cut(s)	259, 607, 618, 936, 2038
HapII	CCGG	3 cut(s)	552, 1555, 2132
HgaI	GACGC	2 cut(s)	1495, 2128
Hin1I	GRCGYC	1 cut(s)	1465
HincII	GTYRAC	2 cut(s)	787, 1463
HindII	GTYRAC	2 cut(s)	787, 1463
HindIII	AAGCTT	1 cut(s)	731
HpaII	CCGG	3 cut(s)	552, 1555, 2132
HphI	GGTGA	7 cut(s)	440, 598, 798, 1026, 1127, 1403, 1804
Hpy166II	GTNNAC	7 cut(s)	396, 423, 787, 949, 1463, 1562, 1568
Hpy8I	GTNNAC	7 cut(s)	396, 423, 787, 949, 1463, 1562, 1568
Hpy99I	CGWCG	1 cut(s)	1467
HpyCH4III	ACNGT	5 cut(s)	223, 343, 664, 1100, 1201
HpyCH4IV	ACGT	4 cut(s)	1465, 1564, 1654, 1855
HpyCH4V	TGCA	8 cut(s)	242, 544, 559, 1186, 1193, 1543, 1617, 1847
HpyF10VI	GCNNNNNNNGC	7 cut(s)	61, 730, 775, 853, 942, 1773, 2128
HpySE526I	ACGT	4 cut(s)	1465, 1564, 1654, 1855
Hsp92I	GRCGYC	1 cut(s)	1465
Kzo9I	GATC	4 cut(s)	1011, 1017, 1228, 1832
LmnI	GCTCC	3 cut(s)	844, 1489, 1500
Lsp1109I	GCAGC	3 cut(s)	68, 1170, 1515
LweI	GCATC	3 cut(s)	865, 890, 1195
MaeI	CTAG	4 cut(s)	1046, 1344, 1446, 1866
MaeII	ACGT	4 cut(s)	1465, 1564, 1654, 1855
MaeIII	GTNAC	7 cut(s)	16, 694, 1115, 1195, 1507, 1645, 1872
MalI	GATC	4 cut(s)	1013, 1019, 1230, 1834
MbiI	CCGCTC	1 cut(s)	136
MboI	GATC	4 cut(s)	1011, 1017, 1228, 1832
MboII	GAAGA	8 cut(s)	1148, 1220, 1280, 1600, 1721, 1911, 2101, 2117
MfeI	CAATTG	2 cut(s)	76, 741
MflI	RGATCY	1 cut(s)	1011
MhlI	GDGCHC	3 cut(s)	1368, 1643, 2053
MlyI	GAGTC	3 cut(s)	1637, 1910, 2026
MmeI	TCCRAC	2 cut(s)	924, 1938
Mph1103I	ATGCAT	1 cut(s)	561
MroXI	GAANNNNTTC	1 cut(s)	1099
MseI	TTAA	7 cut(s)	905, 1008, 1107, 1674, 1818, 2001, 2174
MslI	CAYNNNNRTG	2 cut(s)	401, 1435
MspA1I	CMGCKG	1 cut(s)	473
MspI	CCGG	3 cut(s)	552, 1555, 2132
MspR9I	CCNGG	6 cut(s)	708, 1416, 1556, 1779, 1978, 2188
MunI	CAATTG	2 cut(s)	76, 741
MvaI	CCWGG	5 cut(s)	708, 1416, 1779, 1978, 2188
MwoI	GCNNNNNNNGC	7 cut(s)	61, 730, 775, 853, 942, 1773, 2128
NciI	CCSGG	1 cut(s)	1556
NcoI	CCATGG	1 cut(s)	335
NdeII	GATC	4 cut(s)	1011, 1017, 1228, 1832
NheI	GCTAGC	1 cut(s)	1045
NlaIV	GGNNCC	3 cut(s)	846, 1406, 1491
NmeAIII	GCCGAG	1 cut(s)	2014
NmuCI	GTSAC	4 cut(s)	16, 1115, 1507, 1872
NsiI	ATGCAT	1 cut(s)	561
NspI	RCATGY	4 cut(s)	563, 1147, 1826, 1847
PaeI	GCATGC	1 cut(s)	1847
PagI	TCATGA	3 cut(s)	130, 576, 1060
PasI	CCCWGGG	1 cut(s)	707
PciI	ACATGT	1 cut(s)	1143
PdmI	GAANNNNTTC	1 cut(s)	1099
PfeI	GAWTC	9 cut(s)	190, 212, 1031, 1247, 1591, 1883, 1910, 2006, 2081
PflMI	CCANNNNNTGG	1 cut(s)	91
PinAI	ACCGGT	1 cut(s)	551
PkrI	GCNGC	3 cut(s)	83, 1185, 1505
PleI	GAGTC	3 cut(s)	1636, 1910, 2026
PmaCI	CACGTG	1 cut(s)	1655
PmlI	CACGTG	1 cut(s)	1655
PpsI	GAGTC	3 cut(s)	1636, 1910, 2026
Ppu21I	YACGTR	3 cut(s)	1565, 1655, 1856
PscI	ACATGT	1 cut(s)	1143
PshBI	ATTAAT	1 cut(s)	1674
Psp6I	CCWGG	5 cut(s)	706, 1414, 1777, 1976, 2186
PspCI	CACGTG	1 cut(s)	1655
PspEI	GGTNACC	1 cut(s)	1115
PspFI	CCCAGC	1 cut(s)	517
PspGI	CCWGG	5 cut(s)	706, 1414, 1777, 1976, 2186
PspN4I	GGNNCC	3 cut(s)	846, 1406, 1491
PspPI	GGNCC	2 cut(s)	934, 1405
PsrI	GAACNNNNNNTAC	2 cut(s)	1558, 1590
PstNI	CAGNNNCTG	2 cut(s)	1199, 1631
PsuI	RGATCY	1 cut(s)	1011
PvuII	CAGCTG	1 cut(s)	473
RsaI	GTAC	4 cut(s)	204, 329, 1203, 1474
RsaNI	GTAC	4 cut(s)	203, 328, 1202, 1473
RseI	CAYNNNNRTG	2 cut(s)	401, 1435
SalI	GTCGAC	1 cut(s)	1461
SaqAI	TTAA	7 cut(s)	905, 1008, 1107, 1674, 1818, 2001, 2174
SatI	GCNGC	3 cut(s)	82, 1184, 1504
Sau3AI	GATC	4 cut(s)	1011, 1017, 1228, 1832
Sau96I	GGNCC	2 cut(s)	934, 1405
SchI	GAGTC	3 cut(s)	1637, 1910, 2026
ScrFI	CCNGG	6 cut(s)	708, 1416, 1556, 1779, 1978, 2188
SduI	GDGCHC	3 cut(s)	1368, 1643, 2053
SfaNI	GCATC	3 cut(s)	865, 890, 1195
SinI	GGWCC	1 cut(s)	1405
SmiMI	CAYNNNNRTG	2 cut(s)	401, 1435
SmlI	CTYRAG	1 cut(s)	2123
SmoI	CTYRAG	1 cut(s)	2123
SnaBI	TACGTA	1 cut(s)	1565
SphI	GCATGC	1 cut(s)	1847
SsiI	CCGC	5 cut(s)	136, 154, 415, 625, 1691
SspI	AATATT	1 cut(s)	2062
SspMI	CTAG	4 cut(s)	1046, 1344, 1446, 1866
StyD4I	CCNGG	6 cut(s)	706, 1414, 1554, 1777, 1976, 2186
StyI	CCWWGG	4 cut(s)	311, 335, 613, 1090
TaaI	ACNGT	5 cut(s)	223, 343, 664, 1100, 1201
TaiI	ACGT	4 cut(s)	1468, 1567, 1657, 1858
TaqI	TCGA	4 cut(s)	171, 639, 1250, 1462
TaqII	GACCGA	1 cut(s)	1999
TatI	WGTACW	2 cut(s)	327, 1201
TfiI	GAWTC	9 cut(s)	190, 212, 1031, 1247, 1591, 1883, 1910, 2006, 2081
Tru1I	TTAA	7 cut(s)	905, 1008, 1107, 1674, 1818, 2001, 2174
Tru9I	TTAA	7 cut(s)	905, 1008, 1107, 1674, 1818, 2001, 2174
TscAI	CASTG	7 cut(s)	27, 228, 1231, 1297, 1516, 2080, 2091
TseFI	GTSAC	4 cut(s)	16, 1115, 1507, 1872
TseI	GCWGC	3 cut(s)	81, 1183, 1503
Tsp45I	GTSAC	4 cut(s)	16, 1115, 1507, 1872
TspDTI	ATGAA	8 cut(s)	119, 473, 905, 1049, 1530, 1602, 1692, 1728
TspRI	CASTG	7 cut(s)	27, 228, 1231, 1297, 1516, 2080, 2091
Van91I	CCANNNNNTGG	1 cut(s)	91
VpaK11BI	GGWCC	1 cut(s)	1405
VspI	ATTAAT	1 cut(s)	1674
XapI	RAATTY	9 cut(s)	291, 460, 528, 797, 1004, 1279, 1309, 1479, 1716
XbaI	TCTAGA	1 cut(s)	1865
XceI	RCATGY	4 cut(s)	563, 1147, 1826, 1847
XmiI	GTMKAC	3 cut(s)	422, 1462, 1561
XmnI	GAANNNNTTC	1 cut(s)	1099
XspI	CTAG	4 cut(s)	1046, 1344, 1446, 1866
ZraI	GACGTC	1 cut(s)	1466
Zsp2I	ATGCAT	1 cut(s)	561

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.