Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0002427

Physical Location & Seq

Genomic Coordinates Reverse (-)

17680174 .. 17685476

Gene Structure 5303 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g24610.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1242 bp

ATGTATAGCAATTTCAAGGAGCAAGCCATAGAGTACGTGAAGCAAGCCGTGCACGAAGACAATAATGGGAACTACGCAAAGGCGTTCCCTTTGTACATGAACGCTCTCGAGTACTTCAAGACCCACCTCAAGTACGAGAAGAACCCTAAGATCAAGGAGGCCATCACCCAGAAATTCACCGAGTACTTACGCCGCGCCGAGGAGATTCGCGCCGTTCTCGACGACGGCGGCCCCGGCCCTGCCTCCAACGGCGACGATCCCGAGCAGGCTAAGCTCCGGGCCGGGCTTAATTCGGCGATTATTAGGGAGAAGCCCAATGTCAAGTGGAATGATGTCGCCGGGCTTGAGAGCGCCAAGCAGGCCTTGCAGGAGGCCGTGATTTTACCGGTCAAGTTCCCTCAGTTCTTTACTGGCAAGAGACGACCATGGAGGGCTTTTCTATTGTATGGTCCTCCTGGAACTGGAAAGTCATACCTGGCCAAGGCTGTTGCAACTGAAGCTGACTCGACATTTTTCAGTATTTCCTCTTCAGATCTGGTTTCAAAGTGGATGGGTGAGAGTGAGAAGCTAGTTTCGAACCTTTTCCAAATGGCTCGAGATAGTGCCCCATCCATCATCTTCGTTGATGAAATAGATTCCTTATGTGGGCAGCGTGGAGAAGGCAATGAGAGTGAAGCTTCTAGACGAATCAAGACAGAACTTCTTGTGCAGATGCAGGGTGTGGGAACCACTGACCAAAAGGTTCTTGTTCTCGCAGCGACGAATACTCCGTATGCATTAGACCAGGCCATTCGAAGACGTTTTGACAAGCGTATATACATTCCCCTTCCAGATGTAAAGGCTCGACAACATATGTTCAAAGTCCACCTGGGAGATACTCCTAACAACTTGACAGAAAGTGATTTTGAAAGCTTAGCTCGCAAAACTGAGGGATTTTCGGGTTCTGATGTAGCTGTTTGTGTCAAGGATGTTCTCTTTGAACCGGTACGCAAAACTCAAGATGCCATGTTCTTTTACAAGAATTCTGATAATATGTTCATACCTTGTGGACCAAAGCAACCAGGTGCCGTCCAAATCACCATGCAGGAGTTGGCAGCTCAAGGACTAGCTTCACAGATCCTTCCACCTCCTATTACAAAAACAGATTTTGATAAGGTACTTGCTAGACAGAGGCCTACTGTGAGCAAAGGTGACCTTGAAGTCCATGAAAGGTTCACGAAAGAATTTGGAGAGGAAGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000902 GO:0000904 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0005770 GO:0005771 GO:0005911 GO:0006629 GO:0006810 GO:0006900 GO:0006914 GO:0006996 GO:0007032 GO:0007033 GO:0007034 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0008202 GO:0009056 GO:0009506 GO:0009653 GO:0009888 GO:0009987 GO:0010008 GO:0010026 GO:0010090 GO:0010091 GO:0010256 GO:0012505 GO:0016020 GO:0016043 GO:0016050 GO:0016125 GO:0016192 GO:0016197 GO:0016236 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0022607 GO:0030054 GO:0030154 GO:0030554 GO:0031090 GO:0031410 GO:0031982 GO:0032502 GO:0032507 GO:0032509 GO:0032511 GO:0032553 GO:0032555 GO:0032559 GO:0032989 GO:0032991 GO:0033036 GO:0033365 GO:0034067 GO:0034613 GO:0035639 GO:0036094 GO:0036452 GO:0042592 GO:0042802 GO:0042803 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045053 GO:0045185 GO:0045324 GO:0046907 GO:0046983 GO:0048468 GO:0048856 GO:0048869 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051235 GO:0051259 GO:0051260 GO:0051641 GO:0051649 GO:0051651 GO:0055044 GO:0055065 GO:0055067 GO:0055075 GO:0055078 GO:0055080 GO:0061024 GO:0061919 GO:0065003 GO:0065007 GO:0065008 GO:0070676 GO:0070727 GO:0071704 GO:0071840 GO:0071985 GO:0090558 GO:0090626 GO:0097159 GO:0097367 GO:0097708 GO:0098588 GO:0098771 GO:0098796 GO:0098805 GO:1901265 GO:1901360 GO:1901363 GO:1901615 GO:1902494 GO:1904949 GO:1990621

KEGG Pathways

Metabolic & Signaling

ko04144 ko04217 map04144 map04217

Pfam Domains

Protein Families

AAA MIT Vps4_C

Protein Analysis

414

Amino Acids

46.25

Weight (kDa)

6.99

Isoelectric Point (pI)

41.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MIT	PF04212	7 - 70	1.7e-21	MIT (microtubule interacting and transport) domain
AAA	PF00004	167 - 296	2.4e-43	ATPase family associated with various cellular activities (AAA)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002427)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G08270 AT1G08270 AT2G27600
fragaria_vesca	FvH4_3g24610 FvH4_3g24610 FvH4_3g24610 FvH4_3g24610
malus_domestica	MD03G1141900.v1.1 MD11G1161300.v1.1
prunus_persica	Prupe.6G127200_v2.0.a1
pyrus_communis	pycom03g09670 pycom11g13390
rosa_chinensis	RchiOBHm_Chr2g0101721 RchiOBHm_Chr5g0044161 RchiOBHm_Chr6g0255971 RchiOBHm_Chr6g0260081 RchiOBHm_Chr7g0184771
rosa_laevigata	RLG00000009143 RLG00000014364 RLG00000021343 RLG00000035169 RLG00000036978
rosa_multiflora	Rmu_sc0000363.1_g000012 Rmu_sc0001648.1_g000029 Rmu_sc0001857.1_g000012 Rmu_sc0004300.1_g000002 Rmu_sc0009830.1_g000003
rosa_roxburghii	Rroxscaffold_2G00091250 Rroxscaffold_3G00264580 Rroxscaffold_7G00197410
rosa_rugosa	Rorug03G0333400
rosa_samantha	Rh2BG234400 Rh2CG154700 Rh5AG295900 Rh5BG309400 Rh5CG292800 Rh5CG330700 Rh6AG305600 Rh7BG180900
rosa_wichuraiana	Rw5G027360 Rw5G027430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1199
AccB1I	GGYRCC	1 cut(s)	1064
AccII	CGCG	2 cut(s)	195, 210
AciI	CCGC	2 cut(s)	193, 228
AclWI	GGATC	2 cut(s)	251, 1111
AcoI	YGGCCR	1 cut(s)	477
AcsI	RAATTY	3 cut(s)	173, 1021, 1223
AcuI	CTGAAG	2 cut(s)	513, 516
AfaI	GTAC	7 cut(s)	35, 95, 113, 134, 185, 987, 1158
AfiI	CCNNNNNNNGG	4 cut(s)	199, 461, 481, 645
AgeI	ACCGGT	2 cut(s)	385, 982
AgsI	TTSAA	7 cut(s)	16, 118, 543, 859, 908, 980, 1199
AjnI	CCWGG	5 cut(s)	454, 474, 783, 867, 1060
AluBI	AGCT	9 cut(s)	274, 500, 568, 677, 912, 917, 953, 1097, 1109
AluI	AGCT	9 cut(s)	274, 500, 568, 677, 912, 917, 953, 1097, 1109
Alw21I	GWGCWC	1 cut(s)	54
Alw26I	GTCTC	1 cut(s)	412
Alw44I	GTGCAC	1 cut(s)	50
AlwI	GGATC	2 cut(s)	251, 1111
Ama87I	CYCGRG	3 cut(s)	107, 260, 594
AoxI	GGCC	9 cut(s)	159, 229, 235, 279, 360, 372, 477, 786, 1172
ApaLI	GTGCAC	1 cut(s)	50
ApeKI	GCWGC	3 cut(s)	649, 755, 1094
ApoI	RAATTY	3 cut(s)	173, 1021, 1223
AsiGI	ACCGGT	2 cut(s)	385, 982
Asp700I	GAANNNNTTC	1 cut(s)	581
AspLEI	GCGC	3 cut(s)	197, 212, 353
AspS9I	GGNCC	5 cut(s)	230, 236, 279, 449, 1049
AsuC2I	CCSGG	4 cut(s)	234, 278, 283, 340
AsuHPI	GGTGA	5 cut(s)	157, 169, 566, 1069, 1202
AsuII	TTCGAA	2 cut(s)	575, 793
AvaI	CYCGRG	3 cut(s)	107, 260, 594
AvaII	GGWCC	2 cut(s)	449, 1049
BaeGI	GKGCMC	2 cut(s)	54, 607
BalI	TGGCCA	1 cut(s)	479
BanI	GGYRCC	1 cut(s)	1064
BarI	GAAGNNNNNNTAC	2 cut(s)	511, 543
BbsI	GAAGAC	2 cut(s)	63, 802
Bbv12I	GWGCWC	1 cut(s)	54
BbvI	GCAGC	3 cut(s)	661, 767, 1106
BccI	CCATC	4 cut(s)	170, 544, 616, 620
BceAI	ACGGC	6 cut(s)	32, 197, 241, 265, 359, 1052
BciT130I	CCWGG	5 cut(s)	456, 476, 785, 869, 1062
BcnI	CCSGG	4 cut(s)	234, 278, 283, 340
BcoDI	GTCTC	1 cut(s)	412
BfaI	CTAG	4 cut(s)	569, 681, 1106, 1164
BfoI	RGCGCY	1 cut(s)	354
BglI	GCCNNNNNGGC	1 cut(s)	359
BglII	AGATCT	1 cut(s)	532
BisI	GCNGC	5 cut(s)	193, 229, 650, 756, 1095
BlpI	GCTNAGC	2 cut(s)	270, 913
BlsI	GCNGC	5 cut(s)	194, 230, 651, 757, 1096
BmcAI	AGTACT	2 cut(s)	113, 185
Bme1390I	CCNGG	9 cut(s)	234, 278, 283, 340, 456, 476, 785, 869, 1062
Bme18I	GGWCC	2 cut(s)	449, 1049
BmeT110I	CYCGRG	3 cut(s)	107, 260, 594
BmgT120I	GGNCC	5 cut(s)	230, 236, 279, 449, 1049
BmiI	GGNNCC	3 cut(s)	232, 727, 1066
BmrFI	CCNGG	9 cut(s)	234, 278, 283, 340, 456, 476, 785, 869, 1062
BmsI	GCATC	2 cut(s)	702, 991
BpiI	GAAGAC	2 cut(s)	63, 802
Bpu1102I	GCTNAGC	2 cut(s)	270, 913
Bpu14I	TTCGAA	2 cut(s)	575, 793
BpuEI	CTTGAG	4 cut(s)	113, 365, 981, 1083
BpuMI	CCSGG	4 cut(s)	234, 278, 283, 340
BsaAI	YACGTR	1 cut(s)	37
BsaJI	CCNNGG	5 cut(s)	198, 232, 425, 480, 868
BsaWI	WCCGGW	2 cut(s)	385, 982
BsaXI	ACNNNNNCTCC	2 cut(s)	751, 781
Bsc4I	CCNNNNNNNGG	4 cut(s)	199, 461, 481, 645
Bse118I	RCCGGY	2 cut(s)	385, 982
Bse1I	ACTGG	2 cut(s)	415, 466
Bse3DI	GCAATG	1 cut(s)	670
BseBI	CCWGG	5 cut(s)	456, 476, 785, 869, 1062
BseDI	CCNNGG	5 cut(s)	198, 232, 425, 480, 868
BseGI	GGATG	3 cut(s)	555, 608, 973
BseLI	CCNNNNNNNGG	4 cut(s)	199, 461, 481, 645
BseMI	GCAATG	1 cut(s)	670
BseMII	CTCAG	2 cut(s)	413, 918
BseNI	ACTGG	2 cut(s)	415, 466
BseRI	GAGGAG	1 cut(s)	215
BseSI	GKGCMC	2 cut(s)	54, 607
BseXI	GCAGC	3 cut(s)	661, 767, 1106
BsgI	GTGCAG	1 cut(s)	728
Bsh1236I	CGCG	2 cut(s)	195, 210
BshFI	GGCC	9 cut(s)	161, 231, 237, 281, 362, 374, 479, 788, 1174
BshNI	GGYRCC	1 cut(s)	1064
BshTI	ACCGGT	2 cut(s)	385, 982
BsiHKAI	GWGCWC	1 cut(s)	54
BsiHKCI	CYCGRG	3 cut(s)	107, 260, 594
BsiSI	CCGG	6 cut(s)	234, 277, 282, 339, 386, 983
BslI	CCNNNNNNNGG	4 cut(s)	199, 461, 481, 645
BsmAI	GTCTC	1 cut(s)	412
BsmBI	CGTCTC	1 cut(s)	412
BsnI	GGCC	9 cut(s)	161, 231, 237, 281, 362, 374, 479, 788, 1174
BsoBI	CYCGRG	3 cut(s)	107, 260, 594
Bsp119I	TTCGAA	2 cut(s)	575, 793
Bsp1286I	GDGCHC	2 cut(s)	54, 607
Bsp1407I	TGTACA	1 cut(s)	93
Bsp143I	GATC	4 cut(s)	150, 256, 532, 1116
Bsp1720I	GCTNAGC	2 cut(s)	270, 913
Bsp19I	CCATGG	1 cut(s)	425
BspACI	CCGC	2 cut(s)	193, 228
BspANI	GGCC	9 cut(s)	161, 231, 237, 281, 362, 374, 479, 788, 1174
BspCNI	CTCAG	2 cut(s)	412, 919
BspFNI	CGCG	2 cut(s)	195, 210
BspLI	GGNNCC	3 cut(s)	232, 727, 1066
BspPI	GGATC	2 cut(s)	251, 1111
BspT104I	TTCGAA	2 cut(s)	575, 793
BspT107I	GGYRCC	1 cut(s)	1064
BsrDI	GCAATG	1 cut(s)	670
BsrFI	RCCGGY	2 cut(s)	385, 982
BsrGI	TGTACA	1 cut(s)	93
BsrI	ACTGG	2 cut(s)	415, 466
BssAI	RCCGGY	2 cut(s)	385, 982
BssECI	CCNNGG	5 cut(s)	198, 232, 425, 480, 868
BssMI	GATC	4 cut(s)	150, 256, 532, 1116
BssT1I	CCWWGG	2 cut(s)	425, 480
Bst2UI	CCWGG	5 cut(s)	456, 476, 785, 869, 1062
Bst4CI	ACNGT	1 cut(s)	1180
Bst6I	CTCTTC	1 cut(s)	532
BstAPI	GCANNNNNTGC	2 cut(s)	49, 364
BstAUI	TGTACA	1 cut(s)	93
BstBAI	YACGTR	1 cut(s)	37
BstBI	TTCGAA	2 cut(s)	575, 793
BstC8I	GCNNGC	5 cut(s)	24, 45, 267, 360, 919
BstDEI	CTNAG	5 cut(s)	147, 270, 399, 913, 927
BstDSI	CCRYGG	1 cut(s)	425
BstEII	GGTNACC	1 cut(s)	1190
BstENI	CCTNNNNNAGG	1 cut(s)	479
BstF5I	GGATG	3 cut(s)	555, 608, 973
BstFNI	CGCG	2 cut(s)	195, 210
BstH2I	RGCGCY	1 cut(s)	354
BstHHI	GCGC	3 cut(s)	197, 212, 353
BstKTI	GATC	4 cut(s)	153, 259, 535, 1119
BstMAI	GTCTC	1 cut(s)	412
BstMBI	GATC	4 cut(s)	150, 256, 532, 1116
BstMWI	GCNNNNNNNGC	7 cut(s)	49, 234, 271, 359, 364, 497, 918
BstNI	CCWGG	5 cut(s)	456, 476, 785, 869, 1062
BstPI	GGTNACC	1 cut(s)	1190
BstSCI	CCNGG	9 cut(s)	232, 276, 281, 338, 454, 474, 783, 867, 1060
BstSLI	GKGCMC	2 cut(s)	54, 607
BstUI	CGCG	2 cut(s)	195, 210
BstV1I	GCAGC	3 cut(s)	661, 767, 1106
BstV2I	GAAGAC	2 cut(s)	63, 802
BstX2I	RGATCY	2 cut(s)	532, 1116
BstYI	RGATCY	2 cut(s)	532, 1116
BsuRI	GGCC	9 cut(s)	161, 231, 237, 281, 362, 374, 479, 788, 1174
BtgI	CCRYGG	1 cut(s)	425
BtsCI	GGATG	3 cut(s)	555, 608, 973
BtsIMutI	CAGTG	1 cut(s)	729
Cac8I	GCNNGC	5 cut(s)	24, 45, 267, 360, 919
CfoI	GCGC	3 cut(s)	197, 212, 353
Cfr10I	RCCGGY	2 cut(s)	385, 982
Cfr13I	GGNCC	5 cut(s)	230, 236, 279, 449, 1049
CsiI	ACCWGGT	1 cut(s)	1060
Csp6I	GTAC	7 cut(s)	34, 94, 112, 133, 184, 986, 1157
CspAI	ACCGGT	2 cut(s)	385, 982
CviAII	CATG	5 cut(s)	97, 426, 1006, 1081, 1205
CviQI	GTAC	7 cut(s)	34, 94, 112, 133, 184, 986, 1157
DdeI	CTNAG	5 cut(s)	147, 270, 399, 913, 927
DpnI	GATC	4 cut(s)	152, 258, 534, 1118
DpnII	GATC	4 cut(s)	150, 256, 532, 1116
DrdI	GACNNNNNNGTC	1 cut(s)	1199
DseDI	GACNNNNNNGTC	1 cut(s)	1199
EaeI	YGGCCR	1 cut(s)	477
Eam1104I	CTCTTC	1 cut(s)	532
EarI	CTCTTC	1 cut(s)	532
Eco130I	CCWWGG	2 cut(s)	425, 480
Eco147I	AGGCCT	2 cut(s)	362, 1174
Eco47I	GGWCC	2 cut(s)	449, 1049
Eco57I	CTGAAG	2 cut(s)	513, 516
Eco88I	CYCGRG	3 cut(s)	107, 260, 594
Eco91I	GGTNACC	1 cut(s)	1190
EcoNI	CCTNNNNNAGG	1 cut(s)	479
EcoO65I	GGTNACC	1 cut(s)	1190
EcoRI	GAATTC	1 cut(s)	1021
EcoRII	CCWGG	5 cut(s)	454, 474, 783, 867, 1060
EcoT14I	CCWWGG	2 cut(s)	425, 480
EcoT22I	ATGCAT	1 cut(s)	778
ErhI	CCWWGG	2 cut(s)	425, 480
Esp3I	CGTCTC	1 cut(s)	412
FaeI	CATG	5 cut(s)	100, 429, 1009, 1084, 1208
FalI	AAGNNNNNCTT	4 cut(s)	347, 379, 1179, 1211
FatI	CATG	5 cut(s)	96, 425, 1005, 1080, 1204
FauNDI	CATATG	1 cut(s)	852
Fnu4HI	GCNGC	5 cut(s)	193, 229, 650, 756, 1095
FokI	GGATG	3 cut(s)	562, 595, 980
Fsp4HI	GCNGC	5 cut(s)	193, 229, 650, 756, 1095
FspBI	CTAG	4 cut(s)	569, 681, 1106, 1164
GlaI	GCGC	3 cut(s)	196, 211, 352
GluI	GCNGC	5 cut(s)	193, 229, 650, 756, 1095
HaeII	RGCGCY	1 cut(s)	354
HaeIII	GGCC	9 cut(s)	161, 231, 237, 281, 362, 374, 479, 788, 1174
HapII	CCGG	6 cut(s)	234, 277, 282, 339, 386, 983
HhaI	GCGC	3 cut(s)	197, 212, 353
Hin1II	CATG	5 cut(s)	100, 429, 1009, 1084, 1208
Hin6I	GCGC	3 cut(s)	195, 210, 351
HinP1I	GCGC	3 cut(s)	195, 210, 351
HindIII	AAGCTT	2 cut(s)	675, 910
HinfI	GANTC	4 cut(s)	205, 503, 635, 687
HpaII	CCGG	6 cut(s)	234, 277, 282, 339, 386, 983
HphI	GGTGA	5 cut(s)	157, 169, 566, 1069, 1202
Hpy166II	GTNNAC	4 cut(s)	52, 865, 1049, 1215
Hpy188I	TCNGA	3 cut(s)	532, 946, 1027
Hpy8I	GTNNAC	4 cut(s)	52, 865, 1049, 1215
Hpy99I	CGWCG	4 cut(s)	224, 227, 257, 763
HpyAV	CCTTC	4 cut(s)	653, 836, 1130, 1229
HpyCH4III	ACNGT	1 cut(s)	1180
HpyCH4IV	ACGT	2 cut(s)	36, 799
HpyCH4V	TGCA	7 cut(s)	52, 367, 491, 709, 715, 776, 1084
HpyF10VI	GCNNNNNNNGC	7 cut(s)	49, 234, 271, 359, 364, 497, 918
HpyF3I	CTNAG	5 cut(s)	147, 270, 399, 913, 927
HpySE526I	ACGT	2 cut(s)	36, 799
Hsp92II	CATG	5 cut(s)	100, 429, 1009, 1084, 1208
HspAI	GCGC	3 cut(s)	195, 210, 351
Kzo9I	GATC	4 cut(s)	150, 256, 532, 1116
LmnI	GCTCC	2 cut(s)	19, 279
Lsp1109I	GCAGC	3 cut(s)	661, 767, 1106
LweI	GCATC	2 cut(s)	702, 991
MabI	ACCWGGT	1 cut(s)	1060
MaeI	CTAG	4 cut(s)	569, 681, 1106, 1164
MaeII	ACGT	2 cut(s)	36, 799
MaeIII	GTNAC	1 cut(s)	1190
MalI	GATC	4 cut(s)	152, 258, 534, 1118
MboI	GATC	4 cut(s)	150, 256, 532, 1116
MboII	GAAGA	5 cut(s)	68, 151, 519, 610, 807
MflI	RGATCY	2 cut(s)	532, 1116
MhlI	GDGCHC	2 cut(s)	54, 607
MlsI	TGGCCA	1 cut(s)	479
MluCI	AATT	5 cut(s)	10, 173, 289, 1021, 1223
MluNI	TGGCCA	1 cut(s)	479
MlyI	GAGTC	1 cut(s)	497
MmeI	TCCRAC	1 cut(s)	270
Mox20I	TGGCCA	1 cut(s)	479
Mph1103I	ATGCAT	1 cut(s)	778
MroXI	GAANNNNTTC	1 cut(s)	581
MscI	TGGCCA	1 cut(s)	479
MseI	TTAA	1 cut(s)	288
Msp20I	TGGCCA	1 cut(s)	479
MspI	CCGG	6 cut(s)	234, 277, 282, 339, 386, 983
MspR9I	CCNGG	9 cut(s)	234, 278, 283, 340, 456, 476, 785, 869, 1062
MvaI	CCWGG	5 cut(s)	456, 476, 785, 869, 1062
MvnI	CGCG	2 cut(s)	195, 210
MwoI	GCNNNNNNNGC	7 cut(s)	49, 234, 271, 359, 364, 497, 918
NciI	CCSGG	4 cut(s)	234, 278, 283, 340
NcoI	CCATGG	1 cut(s)	425
NdeI	CATATG	1 cut(s)	852
NdeII	GATC	4 cut(s)	150, 256, 532, 1116
NlaIII	CATG	5 cut(s)	100, 429, 1009, 1084, 1208
NlaIV	GGNNCC	3 cut(s)	232, 727, 1066
NmeAIII	GCCGAG	1 cut(s)	223
NmuCI	GTSAC	1 cut(s)	1190
NsiI	ATGCAT	1 cut(s)	778
NspV	TTCGAA	2 cut(s)	575, 793
PaeR7I	CTCGAG	2 cut(s)	107, 594
PceI	AGGCCT	2 cut(s)	362, 1174
PcsI	WCGNNNNNNNCGW	1 cut(s)	767
PdmI	GAANNNNTTC	1 cut(s)	581
PfeI	GAWTC	3 cut(s)	205, 635, 687
PfoI	TCCNGGA	1 cut(s)	454
PinAI	ACCGGT	2 cut(s)	385, 982
PkrI	GCNGC	5 cut(s)	194, 230, 651, 757, 1096
PleI	GAGTC	1 cut(s)	497
PpsI	GAGTC	1 cut(s)	497
Ppu21I	YACGTR	1 cut(s)	37
Psp6I	CCWGG	5 cut(s)	454, 474, 783, 867, 1060
PspEI	GGTNACC	1 cut(s)	1190
PspGI	CCWGG	5 cut(s)	454, 474, 783, 867, 1060
PspN4I	GGNNCC	3 cut(s)	232, 727, 1066
PspPI	GGNCC	5 cut(s)	230, 236, 279, 449, 1049
PsuI	RGATCY	2 cut(s)	532, 1116
RsaI	GTAC	7 cut(s)	35, 95, 113, 134, 185, 987, 1158
RsaNI	GTAC	7 cut(s)	34, 94, 112, 133, 184, 986, 1157
SaqAI	TTAA	1 cut(s)	288
SatI	GCNGC	5 cut(s)	193, 229, 650, 756, 1095
Sau3AI	GATC	4 cut(s)	150, 256, 532, 1116
Sau96I	GGNCC	5 cut(s)	230, 236, 279, 449, 1049
ScaI	AGTACT	2 cut(s)	113, 185
SchI	GAGTC	1 cut(s)	497
ScrFI	CCNGG	9 cut(s)	234, 278, 283, 340, 456, 476, 785, 869, 1062
SduI	GDGCHC	2 cut(s)	54, 607
SexAI	ACCWGGT	1 cut(s)	1060
SfaNI	GCATC	2 cut(s)	702, 991
Sfr274I	CTCGAG	2 cut(s)	107, 594
SfuI	TTCGAA	2 cut(s)	575, 793
SinI	GGWCC	2 cut(s)	449, 1049
SlaI	CTCGAG	2 cut(s)	107, 594
SmlI	CTYRAG	6 cut(s)	107, 128, 344, 594, 996, 1098
SmoI	CTYRAG	6 cut(s)	107, 128, 344, 594, 996, 1098
Sse9I	AATT	5 cut(s)	10, 173, 289, 1021, 1223
SseBI	AGGCCT	2 cut(s)	362, 1174
SsiI	CCGC	2 cut(s)	193, 228
SspMI	CTAG	4 cut(s)	569, 681, 1106, 1164
StuI	AGGCCT	2 cut(s)	362, 1174
StyD4I	CCNGG	9 cut(s)	232, 276, 281, 338, 454, 474, 783, 867, 1060
StyI	CCWWGG	2 cut(s)	425, 480
TaaI	ACNGT	1 cut(s)	1180
TaiI	ACGT	2 cut(s)	39, 802
TaqI	TCGA	7 cut(s)	108, 219, 506, 575, 595, 793, 844
TasI	AATT	5 cut(s)	10, 173, 289, 1021, 1223
TatI	WGTACW	3 cut(s)	93, 111, 183
TauI	GCSGC	2 cut(s)	195, 231
TfiI	GAWTC	3 cut(s)	205, 635, 687
Tru1I	TTAA	1 cut(s)	288
Tru9I	TTAA	1 cut(s)	288
TscAI	CASTG	1 cut(s)	736
TseFI	GTSAC	1 cut(s)	1190
TseI	GCWGC	3 cut(s)	649, 755, 1094
Tsp45I	GTSAC	1 cut(s)	1190
TspDTI	ATGAA	4 cut(s)	113, 642, 1027, 1221
TspGWI	ACGGA	1 cut(s)	759
TspRI	CASTG	1 cut(s)	736
VneI	GTGCAC	1 cut(s)	50
VpaK11BI	GGWCC	2 cut(s)	449, 1049
XagI	CCTNNNNNAGG	1 cut(s)	479
XapI	RAATTY	3 cut(s)	173, 1021, 1223
XbaI	TCTAGA	1 cut(s)	680
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1087
XhoI	CTCGAG	2 cut(s)	107, 594
XmnI	GAANNNNTTC	1 cut(s)	581
XspI	CTAG	4 cut(s)	569, 681, 1106, 1164
ZrmI	AGTACT	2 cut(s)	113, 185
Zsp2I	ATGCAT	1 cut(s)	778

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.