pycom11g13390

Belongs to the AAA ATPase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0002427
Physical Location & Seq
Reverse (-)
12678391 .. 12682807
4417 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g13390.9

Sequence Viewer

Length: 1350 bp
ATGTATAGCAATTTCAAGGAGCAAGCGATTGAGTACGTGAAGCAAGCCGTGCAGGAAGATAATGCGGGAAATTACGCAAAGGCGTTCCCTTTGTACATGAACGCCTTGGAGTACTTCAAGACCCACTTGAAGTACGAGAAGAACCCTAAGATCAAGGAGGCAATAACCCAGAAGTTCACCGAGTACTTGCGCCGTGCCGAGGAGATTCGGGCGGTGTTGGATGACGGCGGCCCAGGGCCGGCGTCGAACGGGGATGCGGCGGTGGCCACCAAGCCCAAGACCAAGCCCAAAGACGGGGAAGGCGGTGACGGTGAGGATCCGGAGCAGGCGAAGCTCCGGGCGGGGCTGAATTCGGCGATTATAAGGGAAAAGCCCAATGTGCAATGGAATGATGTTGCTGGTTTGGAGAGTGCCAAGCAGGCCTTGCAAGAGGCGGTTATATTGCCGGTCAAATTCCCGCAGTTCTTTACTGGCAAGAGACGGCCGTGGAGGGCATTTCTATTGTATGGGCCTCCTGGAACTGGAAAGTCTTACTTGGCCAAGGCTGTTGCAACTGAGGCAGACTCGACATTTTTCAGTATTTCGTCTTCAGACCTTGTTTCAAAGTGGATGGGTGAGAGTGAAAAGCTAGTTTCAAACCTTTTCCAAATGGCTCGTGATAGTGCACCATCCATTATATTCATCGATGAGATAGATTCCTTATGTGGGACTCGTGGAGAAGGCAATGAGAGTGAAGCGTCTAGACGAATTAAGACGGAACTTCTTGTGCAGATGCAGGGTGTGGGACACAATGATCAGAAAGTTCTTGTTCTCGCAGCAACAAATACTCCATATGCACTAGATCAGGCTATTCGGCGACGTTTCGACAAGCGTATATATATCCCCCTCCCAGATTTAAAGGCTCGACAGCATATGTTCAAAGTGCATCTAGGAGATACTCCTCACAACTTAACAGAAAGTGATTTTGAAAGCTTAGCTCGCAAAACTGATGGCTTTTCTGGTTCTGATATTGCTGTTTGTGTTAAAGACGTTCTCTTTGAACCTGTTCGTAAAACGCAAGATGCCATGTTCTTTTTCAAGGATCGATCTAAGGATATGTGGATACCATGTGGACCAAAGCAACCAGGTGCTGTCCAAATCACCATGCAGGATCTGGCGGCAAAAGGACTCGCTTCACAGATCCTTCCGCCTCCTATCACAAAAACAGATTTCGATAAGGTGTTTCGCGTCTTTCAGGAGCCGGGGCGCCTTCGGAGGAATGGATCCAGAGTCTGGCCGATTTCCAAGATTCCGGCCGAGTTCCATGACCTGGGATTCAATTCAACCCTTCACCACCCTCAAATTTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000166 GO:0000902 GO:0000904 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005768 GO:0005770 GO:0005771 GO:0005911 GO:0006629 GO:0006810 GO:0006900 GO:0006914 GO:0006996 GO:0007032 GO:0007033 GO:0007034 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0008202 GO:0009056 GO:0009506 GO:0009653 GO:0009888 GO:0009987 GO:0010008 GO:0010026 GO:0010090 GO:0010091 GO:0010256 GO:0012505 GO:0016020 GO:0016043 GO:0016050 GO:0016125 GO:0016192 GO:0016197 GO:0016236 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017076 GO:0017111 GO:0022607 GO:0030054 GO:0030154 GO:0030554 GO:0031090 GO:0031410 GO:0031982 GO:0032502 GO:0032507 GO:0032509 GO:0032511 GO:0032553 GO:0032555 GO:0032559 GO:0032989 GO:0032991 GO:0033036 GO:0033365 GO:0034067 GO:0034613 GO:0035639 GO:0036094 GO:0036452 GO:0042592 GO:0042802 GO:0042803 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044248 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045053 GO:0045185 GO:0045324 GO:0046907 GO:0046983 GO:0048468 GO:0048856 GO:0048869 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051235 GO:0051259 GO:0051260 GO:0051641 GO:0051649 GO:0051651 GO:0055044 GO:0055065 GO:0055067 GO:0055075 GO:0055078 GO:0055080 GO:0061024 GO:0061919 GO:0065003 GO:0065007 GO:0065008 GO:0070676 GO:0070727 GO:0071704 GO:0071840 GO:0071985 GO:0090558 GO:0090626 GO:0097159 GO:0097367 GO:0097708 GO:0098588 GO:0098771 GO:0098796 GO:0098805 GO:1901265 GO:1901360 GO:1901363 GO:1901615 GO:1902494 GO:1904949 GO:1990621
KEGG Pathways
Metabolic & Signaling
ko04144 ko04217 map04144 map04217
Pfam Domains
Protein Families
AAA MIT Vps4_C

Protein Analysis

450

Amino Acids

50.26

Weight (kDa)

8.8

Isoelectric Point (pI)

42.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 362
AccB1I GGYRCC 1 cut(s) 1245
AccB7I CCANNNNNTGG 2 cut(s) 1272, 1309
AccII CGCG 1 cut(s) 1227
AccIII TCCGGA 1 cut(s) 319
AclWI GGATC 7 cut(s) 311, 324, 1089, 1158, 1174, 1257, 1270
AcoI YGGCCR 5 cut(s) 264, 482, 537, 1274, 1293
AcsI RAATTY 3 cut(s) 349, 452, 1341
AcuI CTGAAG 1 cut(s) 573
AcyI GRCGYC 2 cut(s) 242, 1246
AfaI GTAC 5 cut(s) 35, 95, 113, 134, 185
AfiI CCNNNNNNNGG 8 cut(s) 199, 238, 293, 294, 521, 705, 1272, 1309
AjnI CCWGG 4 cut(s) 232, 514, 1123, 1308
AluBI AGCT 4 cut(s) 334, 628, 972, 977
AluI AGCT 4 cut(s) 334, 628, 972, 977
Alw21I GWGCWC 1 cut(s) 667
Alw26I GTCTC 1 cut(s) 472
Alw44I GTGCAC 1 cut(s) 663
AlwI GGATC 7 cut(s) 311, 324, 1089, 1158, 1174, 1257, 1270
AlwNI CAGNNNCTG 3 cut(s) 1130, 1153, 1272
Aor13HI TCCGGA 1 cut(s) 319
AoxI GGCC 9 cut(s) 229, 236, 264, 420, 482, 509, 537, 1274, 1293
ApaLI GTGCAC 1 cut(s) 663
ApeKI GCWGC 1 cut(s) 815
ApoI RAATTY 3 cut(s) 349, 452, 1341
ArsI GACNNNNNNTTYG 2 cut(s) 1019, 1051
Asp700I GAANNNNTTC 1 cut(s) 1044
AspLEI GCGC 2 cut(s) 192, 1248
AspS9I GGNCC 4 cut(s) 230, 236, 509, 1112
AsuC2I CCSGG 2 cut(s) 338, 1242
AsuHPI GGTGA 6 cut(s) 169, 317, 323, 626, 1132, 1322
AvaII GGWCC 1 cut(s) 1112
BaeGI GKGCMC 1 cut(s) 667
BalI TGGCCA 2 cut(s) 266, 539
BamHI GGATCC 2 cut(s) 316, 1262
BanI GGYRCC 1 cut(s) 1245
BarI GAAGNNNNNNTAC 2 cut(s) 571, 603
BauI CACGAG 2 cut(s) 654, 711
BbsI GAAGAC 1 cut(s) 579
Bbv12I GWGCWC 1 cut(s) 667
BbvI GCAGC 1 cut(s) 827
BccI CCATC 3 cut(s) 604, 676, 983
BceAI ACGGC 5 cut(s) 32, 177, 241, 469, 497
BciT130I CCWGG 4 cut(s) 234, 516, 1125, 1310
BciVI GTATCC 1 cut(s) 1095
BclI TGATCA 1 cut(s) 793
BcnI CCSGG 2 cut(s) 338, 1242
BcoDI GTCTC 1 cut(s) 472
BfaI CTAG 4 cut(s) 629, 741, 839, 929
BfoI RGCGCY 1 cut(s) 1249
BfuI GTATCC 1 cut(s) 1095
BglI GCCNNNNNGGC 1 cut(s) 419
BisI GCNGC 4 cut(s) 229, 258, 816, 1158
BlpI GCTNAGC 1 cut(s) 973
BlsI GCNGC 4 cut(s) 230, 259, 817, 1159
BmcAI AGTACT 2 cut(s) 113, 185
Bme1390I CCNGG 6 cut(s) 234, 338, 516, 1125, 1242, 1310
Bme18I GGWCC 1 cut(s) 1112
BmgT120I GGNCC 4 cut(s) 230, 236, 509, 1112
BmiI GGNNCC 4 cut(s) 318, 1239, 1247, 1264
BmrFI CCNGG 6 cut(s) 234, 338, 516, 1125, 1242, 1310
BmsI GCATC 4 cut(s) 244, 762, 934, 1051
BpiI GAAGAC 1 cut(s) 579
BplI GAGNNNNNCTC 2 cut(s) 548, 580
Bpu1102I GCTNAGC 1 cut(s) 973
BpuMI CCSGG 2 cut(s) 338, 1242
Bsa29I ATCGAT 2 cut(s) 684, 1084
BsaAI YACGTR 1 cut(s) 37
BsaHI GRCGYC 2 cut(s) 242, 1246
BsaJI CCNNGG 8 cut(s) 105, 198, 232, 233, 485, 540, 1241, 1309
BsaWI WCCGGW 1 cut(s) 319
BsaXI ACNNNNNCTCC 2 cut(s) 811, 841
Bsc4I CCNNNNNNNGG 8 cut(s) 199, 238, 293, 294, 521, 705, 1272, 1309
Bse118I RCCGGY 2 cut(s) 238, 445
Bse1I ACTGG 2 cut(s) 475, 526
Bse3DI GCAATG 2 cut(s) 389, 730
BseAI TCCGGA 1 cut(s) 319
BseBI CCWGG 4 cut(s) 234, 516, 1125, 1310
BseCI ATCGAT 2 cut(s) 684, 1084
BseDI CCNNGG 8 cut(s) 105, 198, 232, 233, 485, 540, 1241, 1309
BseGI GGATG 4 cut(s) 226, 259, 615, 668
BseLI CCNNNNNNNGG 8 cut(s) 199, 238, 293, 294, 521, 705, 1272, 1309
BseMI GCAATG 2 cut(s) 389, 730
BseMII CTCAG 1 cut(s) 546
BseNI ACTGG 2 cut(s) 475, 526
BseRI GAGGAG 2 cut(s) 215, 930
BseSI GKGCMC 1 cut(s) 667
BseX3I CGGCCG 2 cut(s) 482, 1293
BseXI GCAGC 1 cut(s) 827
BsgI GTGCAG 2 cut(s) 71, 788
Bsh1236I CGCG 1 cut(s) 1227
Bsh1285I CGRYCG 2 cut(s) 485, 1296
BshFI GGCC 9 cut(s) 231, 238, 266, 422, 484, 511, 539, 1276, 1295
BshNI GGYRCC 1 cut(s) 1245
BshVI ATCGAT 2 cut(s) 684, 1084
BsiEI CGRYCG 2 cut(s) 485, 1296
BsiHKAI GWGCWC 1 cut(s) 667
BsiSI CCGG 6 cut(s) 239, 320, 337, 446, 1241, 1292
BslFI GGGAC 2 cut(s) 721, 798
BslI CCNNNNNNNGG 8 cut(s) 199, 238, 293, 294, 521, 705, 1272, 1309
BsmAI GTCTC 1 cut(s) 472
BsmBI CGTCTC 1 cut(s) 472
BsmFI GGGAC 2 cut(s) 721, 798
BsnI GGCC 9 cut(s) 231, 238, 266, 422, 484, 511, 539, 1276, 1295
Bsp1286I GDGCHC 1 cut(s) 667
Bsp13I TCCGGA 1 cut(s) 319
Bsp1407I TGTACA 1 cut(s) 93
Bsp143I GATC 9 cut(s) 150, 316, 793, 841, 1081, 1085, 1150, 1179, 1262
Bsp1720I GCTNAGC 1 cut(s) 973
BspANI GGCC 9 cut(s) 231, 238, 266, 422, 484, 511, 539, 1276, 1295
BspCNI CTCAG 1 cut(s) 547
BspDI ATCGAT 2 cut(s) 684, 1084
BspEI TCCGGA 1 cut(s) 319
BspFNI CGCG 1 cut(s) 1227
BspLI GGNNCC 4 cut(s) 318, 1239, 1247, 1264
BspPI GGATC 7 cut(s) 311, 324, 1089, 1158, 1174, 1257, 1270
BspT107I GGYRCC 1 cut(s) 1245
BsrDI GCAATG 2 cut(s) 389, 730
BsrFI RCCGGY 2 cut(s) 238, 445
BsrGI TGTACA 1 cut(s) 93
BsrI ACTGG 2 cut(s) 475, 526
BssAI RCCGGY 2 cut(s) 238, 445
BssECI CCNNGG 8 cut(s) 105, 198, 232, 233, 485, 540, 1241, 1309
BssMI GATC 9 cut(s) 150, 316, 793, 841, 1081, 1085, 1150, 1179, 1262
BssNI GRCGYC 2 cut(s) 242, 1246
BssSI CACGAG 2 cut(s) 654, 711
BssT1I CCWWGG 2 cut(s) 105, 540
Bst2BI CACGAG 2 cut(s) 654, 711
Bst2UI CCWGG 4 cut(s) 234, 516, 1125, 1310
Bst4CI ACNGT 1 cut(s) 311
BstACI GRCGYC 2 cut(s) 242, 1246
BstAPI GCANNNNNTGC 2 cut(s) 49, 424
BstAUI TGTACA 1 cut(s) 93
BstBAI YACGTR 1 cut(s) 37
BstC8I GCNNGC 6 cut(s) 24, 45, 240, 327, 420, 979
BstDEI CTNAG 4 cut(s) 147, 555, 973, 1089
BstDSI CCRYGG 1 cut(s) 485
BstF5I GGATG 4 cut(s) 226, 259, 615, 668
BstFNI CGCG 1 cut(s) 1227
BstH2I RGCGCY 1 cut(s) 1249
BstHHI GCGC 2 cut(s) 192, 1248
BstKTI GATC 9 cut(s) 153, 319, 796, 844, 1084, 1088, 1153, 1182, 1265
BstMAI GTCTC 1 cut(s) 472
BstMBI GATC 9 cut(s) 150, 316, 793, 841, 1081, 1085, 1150, 1179, 1262
BstMCI CGRYCG 2 cut(s) 485, 1296
BstMWI GCNNNNNNNGC 8 cut(s) 49, 263, 331, 379, 419, 424, 557, 978
BstNI CCWGG 4 cut(s) 234, 516, 1125, 1310
BstSCI CCNGG 6 cut(s) 232, 336, 514, 1123, 1240, 1308
BstSLI GKGCMC 1 cut(s) 667
BstUI CGCG 1 cut(s) 1227
BstV1I GCAGC 1 cut(s) 827
BstV2I GAAGAC 1 cut(s) 579
BstX2I RGATCY 4 cut(s) 316, 1150, 1179, 1262
BstYI RGATCY 4 cut(s) 316, 1150, 1179, 1262
BstZI CGGCCG 2 cut(s) 482, 1293
Bsu15I ATCGAT 2 cut(s) 684, 1084
BsuI GTATCC 1 cut(s) 1095
BsuRI GGCC 9 cut(s) 231, 238, 266, 422, 484, 511, 539, 1276, 1295
BsuTUI ATCGAT 2 cut(s) 684, 1084
BtgI CCRYGG 1 cut(s) 485
BtsCI GGATG 4 cut(s) 226, 259, 615, 668
Cac8I GCNNGC 6 cut(s) 24, 45, 240, 327, 420, 979
CaiI CAGNNNCTG 3 cut(s) 1130, 1153, 1272
CfoI GCGC 2 cut(s) 192, 1248
Cfr10I RCCGGY 2 cut(s) 238, 445
Cfr13I GGNCC 4 cut(s) 230, 236, 509, 1112
ClaI ATCGAT 2 cut(s) 684, 1084
CseI GACGC 3 cut(s) 231, 726, 1216
CsiI ACCWGGT 1 cut(s) 1123
Csp6I GTAC 5 cut(s) 34, 94, 112, 133, 184
CviAII CATG 5 cut(s) 97, 1066, 1107, 1144, 1304
CviQI GTAC 5 cut(s) 34, 94, 112, 133, 184
DdeI CTNAG 4 cut(s) 147, 555, 973, 1089
DinI GGCGCC 1 cut(s) 1247
DpnI GATC 9 cut(s) 152, 318, 795, 843, 1083, 1087, 1152, 1181, 1264
DpnII GATC 9 cut(s) 150, 316, 793, 841, 1081, 1085, 1150, 1179, 1262
DraI TTTAAA 1 cut(s) 897
EaeI YGGCCR 5 cut(s) 264, 482, 537, 1274, 1293
EagI CGGCCG 2 cut(s) 482, 1293
EciI GGCGGA 1 cut(s) 1176
EclXI CGGCCG 2 cut(s) 482, 1293
Eco130I CCWWGG 2 cut(s) 105, 540
Eco147I AGGCCT 1 cut(s) 422
Eco47I GGWCC 1 cut(s) 1112
Eco52I CGGCCG 2 cut(s) 482, 1293
Eco57I CTGAAG 1 cut(s) 573
EcoRI GAATTC 1 cut(s) 349
EcoRII CCWGG 4 cut(s) 232, 514, 1123, 1308
EcoT14I CCWWGG 2 cut(s) 105, 540
EgeI GGCGCC 1 cut(s) 1247
EheI GGCGCC 1 cut(s) 1247
ErhI CCWWGG 2 cut(s) 105, 540
Esp3I CGTCTC 1 cut(s) 472
FaeI CATG 5 cut(s) 100, 1069, 1110, 1147, 1307
FalI AAGNNNNNCTT 6 cut(s) 110, 142, 407, 439, 518, 550
FaqI GGGAC 2 cut(s) 721, 798
FatI CATG 5 cut(s) 96, 1065, 1106, 1143, 1303
FauI CCCGC 3 cut(s) 58, 334, 465
FauNDI CATATG 2 cut(s) 832, 912
FbaI TGATCA 1 cut(s) 793
Fnu4HI GCNGC 4 cut(s) 229, 258, 816, 1158
FokI GGATG 4 cut(s) 233, 266, 622, 655
Fsp4HI GCNGC 4 cut(s) 229, 258, 816, 1158
FspBI CTAG 4 cut(s) 629, 741, 839, 929
GlaI GCGC 2 cut(s) 191, 1247
GluI GCNGC 4 cut(s) 229, 258, 816, 1158
HaeII RGCGCY 1 cut(s) 1249
HaeIII GGCC 9 cut(s) 231, 238, 266, 422, 484, 511, 539, 1276, 1295
HapII CCGG 6 cut(s) 239, 320, 337, 446, 1241, 1292
HgaI GACGC 3 cut(s) 231, 726, 1216
HhaI GCGC 2 cut(s) 192, 1248
Hin1I GRCGYC 2 cut(s) 242, 1246
Hin1II CATG 5 cut(s) 100, 1069, 1110, 1147, 1307
Hin6I GCGC 2 cut(s) 190, 1246
HinP1I GCGC 2 cut(s) 190, 1246
HindIII AAGCTT 1 cut(s) 970
HinfI GANTC 8 cut(s) 205, 563, 695, 709, 1167, 1269, 1288, 1314
HpaII CCGG 6 cut(s) 239, 320, 337, 446, 1241, 1292
HphI GGTGA 6 cut(s) 169, 317, 323, 626, 1132, 1322
Hpy166II GTNNAC 3 cut(s) 177, 665, 1112
Hpy188I TCNGA 4 cut(s) 592, 798, 1006, 1254
Hpy188III TCNNGA 6 cut(s) 118, 320, 656, 741, 1235, 1266
Hpy8I GTNNAC 3 cut(s) 177, 665, 1112
Hpy99I CGWCG 2 cut(s) 247, 861
HpyAV CCTTC 5 cut(s) 293, 713, 1193, 1259, 1337
HpyCH4III ACNGT 1 cut(s) 311
HpyCH4IV ACGT 3 cut(s) 36, 859, 1029
HpyF10VI GCNNNNNNNGC 8 cut(s) 49, 263, 331, 379, 419, 424, 557, 978
HpyF3I CTNAG 4 cut(s) 147, 555, 973, 1089
HpySE526I ACGT 3 cut(s) 36, 859, 1029
Hsp92I GRCGYC 2 cut(s) 242, 1246
Hsp92II CATG 5 cut(s) 100, 1069, 1110, 1147, 1307
HspAI GCGC 2 cut(s) 190, 1246
KasI GGCGCC 1 cut(s) 1245
Kpn2I TCCGGA 1 cut(s) 319
KroI GCCGGC 1 cut(s) 238
KroNI GCCGGC 1 cut(s) 240
Ksp22I TGATCA 1 cut(s) 793
Kzo9I GATC 9 cut(s) 150, 316, 793, 841, 1081, 1085, 1150, 1179, 1262
LmnI GCTCC 4 cut(s) 19, 322, 339, 1237
Lsp1109I GCAGC 1 cut(s) 827
LweI GCATC 4 cut(s) 244, 762, 934, 1051
MabI ACCWGGT 1 cut(s) 1123
MaeI CTAG 4 cut(s) 629, 741, 839, 929
MaeII ACGT 3 cut(s) 36, 859, 1029
MaeIII GTNAC 1 cut(s) 305
MalI GATC 9 cut(s) 152, 318, 795, 843, 1083, 1087, 1152, 1181, 1264
MboI GATC 9 cut(s) 150, 316, 793, 841, 1081, 1085, 1150, 1179, 1262
MboII GAAGA 3 cut(s) 68, 151, 579
MflI RGATCY 4 cut(s) 316, 1150, 1179, 1262
MhlI GDGCHC 1 cut(s) 667
MlsI TGGCCA 2 cut(s) 266, 539
MluCI AATT 7 cut(s) 10, 70, 349, 452, 747, 1318, 1341
MluNI TGGCCA 2 cut(s) 266, 539
Mly113I GGCGCC 1 cut(s) 1246
MlyI GAGTC 4 cut(s) 557, 703, 1161, 1278
MmeI TCCRAC 1 cut(s) 198
Mox20I TGGCCA 2 cut(s) 266, 539
MroI TCCGGA 1 cut(s) 319
MroNI GCCGGC 1 cut(s) 238
MroXI GAANNNNTTC 1 cut(s) 1044
MscI TGGCCA 2 cut(s) 266, 539
MseI TTAA 4 cut(s) 750, 896, 950, 1023
Msp20I TGGCCA 2 cut(s) 266, 539
MspI CCGG 6 cut(s) 239, 320, 337, 446, 1241, 1292
MspR9I CCNGG 6 cut(s) 234, 338, 516, 1125, 1242, 1310
MvaI CCWGG 4 cut(s) 234, 516, 1125, 1310
MvnI CGCG 1 cut(s) 1227
MwoI GCNNNNNNNGC 8 cut(s) 49, 263, 331, 379, 419, 424, 557, 978
NaeI GCCGGC 1 cut(s) 240
NarI GGCGCC 1 cut(s) 1246
NciI CCSGG 2 cut(s) 338, 1242
NdeI CATATG 2 cut(s) 832, 912
NdeII GATC 9 cut(s) 150, 316, 793, 841, 1081, 1085, 1150, 1179, 1262
NgoMIV GCCGGC 1 cut(s) 238
NlaIII CATG 5 cut(s) 100, 1069, 1110, 1147, 1307
NlaIV GGNNCC 4 cut(s) 318, 1239, 1247, 1264
NmeAIII GCCGAG 2 cut(s) 223, 1321
NmuCI GTSAC 1 cut(s) 305
PasI CCCWGGG 1 cut(s) 233
PceI AGGCCT 1 cut(s) 422
PdiI GCCGGC 1 cut(s) 240
PdmI GAANNNNTTC 1 cut(s) 1044
PfeI GAWTC 4 cut(s) 205, 695, 1288, 1314
PflMI CCANNNNNTGG 2 cut(s) 1272, 1309
PfoI TCCNGGA 1 cut(s) 514
PkrI GCNGC 4 cut(s) 230, 259, 817, 1159
PleI GAGTC 4 cut(s) 557, 703, 1161, 1277
PluTI GGCGCC 1 cut(s) 1249
PpsI GAGTC 4 cut(s) 557, 703, 1161, 1277
Ppu21I YACGTR 1 cut(s) 37
PsiI TTATAA 1 cut(s) 362
Psp6I CCWGG 4 cut(s) 232, 514, 1123, 1308
PspGI CCWGG 4 cut(s) 232, 514, 1123, 1308
PspN4I GGNNCC 4 cut(s) 318, 1239, 1247, 1264
PspPI GGNCC 4 cut(s) 230, 236, 509, 1112
PstNI CAGNNNCTG 3 cut(s) 1130, 1153, 1272
PsuI RGATCY 4 cut(s) 316, 1150, 1179, 1262
RsaI GTAC 5 cut(s) 35, 95, 113, 134, 185
RsaNI GTAC 5 cut(s) 34, 94, 112, 133, 184
SaqAI TTAA 4 cut(s) 750, 896, 950, 1023
SatI GCNGC 4 cut(s) 229, 258, 816, 1158
Sau3AI GATC 9 cut(s) 150, 316, 793, 841, 1081, 1085, 1150, 1179, 1262
Sau96I GGNCC 4 cut(s) 230, 236, 509, 1112
ScaI AGTACT 2 cut(s) 113, 185
SchI GAGTC 4 cut(s) 557, 703, 1161, 1278
ScrFI CCNGG 6 cut(s) 234, 338, 516, 1125, 1242, 1310
SduI GDGCHC 1 cut(s) 667
SexAI ACCWGGT 1 cut(s) 1123
SfaNI GCATC 4 cut(s) 244, 762, 934, 1051
SfoI GGCGCC 1 cut(s) 1247
SinI GGWCC 1 cut(s) 1112
Sse9I AATT 7 cut(s) 10, 70, 349, 452, 747, 1318, 1341
SseBI AGGCCT 1 cut(s) 422
SspDI GGCGCC 1 cut(s) 1245
SspMI CTAG 4 cut(s) 629, 741, 839, 929
StuI AGGCCT 1 cut(s) 422
StyD4I CCNGG 6 cut(s) 232, 336, 514, 1123, 1240, 1308
StyI CCWWGG 2 cut(s) 105, 540
TaaI ACNGT 1 cut(s) 311
TaiI ACGT 3 cut(s) 39, 862, 1032
TaqI TCGA 7 cut(s) 245, 566, 684, 864, 904, 1084, 1212
TasI AATT 7 cut(s) 10, 70, 349, 452, 747, 1318, 1341
TatI WGTACW 3 cut(s) 93, 111, 183
TauI GCSGC 3 cut(s) 231, 260, 1160
TfiI GAWTC 4 cut(s) 205, 695, 1288, 1314
Tru1I TTAA 4 cut(s) 750, 896, 950, 1023
Tru9I TTAA 4 cut(s) 750, 896, 950, 1023
TseFI GTSAC 1 cut(s) 305
TseI GCWGC 1 cut(s) 815
Tsp45I GTSAC 1 cut(s) 305
TspDTI ATGAA 2 cut(s) 113, 670
TspGWI ACGGA 1 cut(s) 770
Van91I CCANNNNNTGG 2 cut(s) 1272, 1309
VneI GTGCAC 1 cut(s) 663
VpaK11BI GGWCC 1 cut(s) 1112
XapI RAATTY 3 cut(s) 349, 452, 1341
XbaI TCTAGA 1 cut(s) 740
XcmI CCANNNNNNNNNTGG 1 cut(s) 1150
XmnI GAANNNNTTC 1 cut(s) 1044
XspI CTAG 4 cut(s) 629, 741, 839, 929
ZrmI AGTACT 2 cut(s) 113, 185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.