Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0002119

Physical Location & Seq

Genomic Coordinates Forward (+)

32771199 .. 32775381

Gene Structure 4183 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g38340.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1695 bp

ATGCCTTCAATCGCCGACCGCAGCGTCGAACAACTCGAGTCTAAGGGCGCGGGATCCGCCGGAGACTCCACTCCCCCGAAACGGAGGTTGAGATCTAACTCCTCGCCGATGAAGCTCAGTCCGATGAAGTGCAAGCGTGTCTCGGTCGTTTCCGTTGCGAAATTGCGCGGCGTTGAGGCTGAATTGGAGAGTAGACTCGAGGAGGTTGGAGGATGCAGCGGTGATTTGACTCCTCAGAAGCGGAAGTTGAGGTCCGATTCGTCGTCGCCGATGAAGCCCAGGCCGGTCTCGTCTCCGATGAAGCCCAAATCGGCTCGCCGGCGCCTAAATTCGTGCACTAATACTTCTGAAAATGGAATTGAGAAGTATTTCAGTCAGAAAAAGCGTCAAGCCTTTGTTAAACCACCGGTTGTTGTCAAGCCGAATTGGAATCCCAGAGATAAGGAGCAAATGAGGATAGTGAAGGAGGCATTGCACTTGTCAACGGTTCCCTCTACTGTCACGTGCCGCGACGTGGAGCAGAAGAGGGTTCTGGAGTTCTGCAAGTCATGCATAGAGCAAGAGAAGGCTGGGAGTTTGTATGTGTGCGGGTGTCCGGGGACTGGGAAATCATTGTCCATGGAGAAAGTGAAACAGCTTTTGGTGAATTGGGCAGGAGAGGGTGGATTTCAGGAACCGGATGTGTTGGAATTGAACTGCACATTGCTAACAAAAACTTCTGATATTTTCACCAAGATACTCGCTAAACACCAACCTCAAAAGAAAGCTAATGGCATTACCTCCCTGCAACTTCTTCAGAAATTATATTCTCAGAAGACTCAGTCAGATGGGACTAAGATGATGTTGGTAATAGCTGATGAGTTGGATTACTTAATCACTAAAGACCGGGCAGTGCTCCATGACCTTTTCATGCTCACAACATACCCATTTTCAAGATGCATACTCCTAGGAGTAGCAAATGCAATTGATCTAGCTGATCGTTTTGTTCCAAAACTCCAGTCATTAAATTGTAAACCTATGGTTATAACCTTTCGGGCATACTCTAAGGATCAAATTCTCAAGATTCTTCAAGAGAGACTTGTGGCACTACCTTACACCGTTTTTCAACCACATGCATTGGAACTTTGTGCCAGAAAAGTTGCTGCTGCATCTGGAGATATGAGGAAAGCTCTCTGTATTTCCAGGAGTGCAATTGAGATGCTGGAAGCAGAGTTGAGAGAATCTACTGACAAGTTAAATTCATCAACAGTAGAGAATCCATTCTCTGAGCAACAGACAGCTTCGGCTCTTTCTCTGGTGAAAAAACAGGAGACTGATGTTGTGAGAATTGATCACATGGCTGTTGCTTTGTCAAAGACATTCAAGTCACCTGTAGTGGATACCATACAATGTCTTCCTCAACATCAGCAGATTATAATGTGCTCTGCTGCAAAGCATTTCCGTGGTGTGAAGAAAGACACAACAATAGGAGAGTTAAATAAATCTTACTTGGACATCTGTAAATCGACACTAATTCCACCGGTTGGAAGCTTTGAATTTTCAAGCATGTGCAAAGTGCTAAATGACCAGGGGCTTCTCAAACTCAGTGGTCAATCCCGAGATATAAAATCCAAGAGAGTGACACTGAATGTAGATGAAGGGGACATCACATTTGCATTGCAGGGAATTCGGTTTTTTCGGACTTGTCTTGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006725 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0022402 GO:0034641 GO:0034645 GO:0042023 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044786 GO:0046483 GO:0071704 GO:0090304 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 map04110 map04111 map04113

Pfam Domains

Protein Families

AAA_22 Cdc6_C

Protein Analysis

565

Amino Acids

62.74

Weight (kDa)

9.39

Isoelectric Point (pI)

47.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_22	PF13401	189 - 306	6.6e-11	AAA domain
Cdc6-ORC-like_ATPase_lid	PF22606	347 - 404	2.9e-11	Cdc6/ORC-like, ATPase lid domain
WHD_Cdc6	PF09079	460 - 552	2e-20	CDC6, C terminal winged helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002119)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07270 AT1G07270 AT2G29680 AT2G29680
fragaria_vesca	FvH4_3g38340 FvH4_3g38340 FvH4_3g38340 FvH4_3g38340 FvH4_3g38340
malus_domestica	MD03G1072700.v1.1 MD11G1078800.v1.1
prunus_persica	Prupe.6G059500_v2.0.a1
pyrus_communis	pycom03g05890 pycom11g06590
rosa_chinensis	RchiOBHm_Chr2g0157131 RchiOBHm_Chr4g0399271 RchiOBHm_Chr5g0068951
rosa_laevigata	RLG00000020961 RLG00000036023
rosa_multiflora	Rmu_sc0001960.1_g000002 Rmu_sc0003822.1_g000023 Rmu_sc0010302.1_g000001
rosa_roxburghii	Rroxscaffold_1G00011800 Rroxscaffold_1G00029470 Rroxscaffold_2G00092520
rosa_rugosa	Rorug01G0058900 Rorug01G0059000 Rorug01G0059100 Rorug01G0059200 Rorug05G0394800 Rorug07G0214100 Rorug07G0214200 Rorug07G0214300
rosa_samantha	Rh2BG537600 Rh2DG546400 Rh4AG092800 Rh4CG101200 Rh5BG470900 Rh5CG493400 Rh7BG347600
rosa_wichuraiana	Rw2G031040 Rw2G043260 Rw4G007640 Rw5G042190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1025, 1415
AasI	GACNNNNNNGTC	2 cut(s)	23, 1363
AccB1I	GGYRCC	1 cut(s)	321
AccB7I	CCANNNNNTGG	1 cut(s)	1523
AccI	GTMKAC	1 cut(s)	193
AccII	CGCG	3 cut(s)	50, 168, 510
AciI	CCGC	8 cut(s)	19, 50, 57, 168, 219, 241, 508, 588
AclWI	GGATC	3 cut(s)	48, 61, 1056
AcsI	RAATTY	5 cut(s)	328, 1053, 1237, 1535, 1665
AcuI	CTGAAG	1 cut(s)	779
AcvI	CACGTG	1 cut(s)	504
AcyI	GRCGYC	1 cut(s)	322
AfiI	CCNNNNNNNGG	4 cut(s)	81, 514, 602, 1523
AgeI	ACCGGT	2 cut(s)	406, 1519
AgsI	TTSAA	8 cut(s)	9, 694, 933, 1070, 1106, 1363, 1535, 1542
AjiI	CACGTC	1 cut(s)	514
AjnI	CCWGG	3 cut(s)	278, 1181, 1566
AjuI	GAANNNNNNNTTGG	2 cut(s)	623, 655
AluBI	AGCT	8 cut(s)	115, 637, 767, 854, 974, 1169, 1280, 1530
AluI	AGCT	8 cut(s)	115, 637, 767, 854, 974, 1169, 1280, 1530
Alw21I	GWGCWC	3 cut(s)	338, 897, 1424
Alw26I	GTCTC	6 cut(s)	57, 145, 292, 297, 1069, 1304
Alw44I	GTGCAC	1 cut(s)	334
AlwI	GGATC	3 cut(s)	48, 61, 1056
Ama87I	CYCGRG	3 cut(s)	35, 197, 1596
AoxI	GGCC	1 cut(s)	281
ApaLI	GTGCAC	1 cut(s)	334
ApeKI	GCWGC	5 cut(s)	21, 216, 1142, 1145, 1427
ApoI	RAATTY	5 cut(s)	328, 1053, 1237, 1535, 1665
ArsI	GACNNNNNNTTYG	4 cut(s)	983, 1015, 1634, 1666
AsiGI	ACCGGT	2 cut(s)	406, 1519
Asp700I	GAANNNNTTC	2 cut(s)	368, 1259
AspA2I	CCTAGG	1 cut(s)	946
AspLEI	GCGC	3 cut(s)	50, 168, 324
AspS9I	GGNCC	1 cut(s)	252
AsuC2I	CCSGG	2 cut(s)	597, 887
AsuHPI	GGTGA	5 cut(s)	233, 655, 721, 1309, 1359
AvaI	CYCGRG	3 cut(s)	35, 197, 1596
AvaII	GGWCC	1 cut(s)	252
AvrII	CCTAGG	1 cut(s)	946
BaeGI	GKGCMC	1 cut(s)	338
BamHI	GGATCC	1 cut(s)	53
BanI	GGYRCC	1 cut(s)	321
BbrPI	CACGTG	1 cut(s)	504
BbsI	GAAGAC	2 cut(s)	821, 1385
Bbv12I	GWGCWC	3 cut(s)	338, 897, 1424
BbvI	GCAGC	5 cut(s)	33, 228, 1129, 1132, 1414
BccI	CCATC	1 cut(s)	821
BcgI	CGANNNNNNTGC	2 cut(s)	1649, 1683
BciT130I	CCWGG	3 cut(s)	280, 1183, 1568
BciVI	GTATCC	1 cut(s)	1372
BclI	TGATCA	1 cut(s)	1330
BcnI	CCSGG	2 cut(s)	597, 887
BcoDI	GTCTC	6 cut(s)	57, 145, 292, 297, 1069, 1304
BfaI	CTAG	2 cut(s)	947, 971
BfmI	CTRYAG	1 cut(s)	1371
BfoI	RGCGCY	1 cut(s)	325
BfuI	GTATCC	1 cut(s)	1372
BglII	AGATCT	1 cut(s)	92
BisI	GCNGC	7 cut(s)	22, 169, 217, 508, 1143, 1146, 1428
BlnI	CCTAGG	1 cut(s)	946
BlsI	GCNGC	7 cut(s)	23, 170, 218, 509, 1144, 1147, 1429
Bme1390I	CCNGG	5 cut(s)	280, 597, 887, 1183, 1568
Bme18I	GGWCC	1 cut(s)	252
BmeT110I	CYCGRG	3 cut(s)	35, 197, 1596
BmgBI	CACGTC	1 cut(s)	514
BmgT120I	GGNCC	1 cut(s)	252
BmiI	GGNNCC	4 cut(s)	55, 323, 489, 675
BmrFI	CCNGG	5 cut(s)	280, 597, 887, 1183, 1568
BmrI	ACTGGG	1 cut(s)	612
BmsI	GCATC	4 cut(s)	203, 926, 1157, 1188
BmuI	ACTGGG	1 cut(s)	612
BpiI	GAAGAC	2 cut(s)	821, 1385
BplI	GAGNNNNNCTC	2 cut(s)	1153, 1185
BpmI	CTGGAG	3 cut(s)	554, 980, 1173
BpuEI	CTTGAG	1 cut(s)	1043
BpuMI	CCSGG	2 cut(s)	597, 887
BsaAI	YACGTR	1 cut(s)	504
BsaHI	GRCGYC	1 cut(s)	322
BsaI	GGTCTC	1 cut(s)	292
BsaJI	CCNNGG	6 cut(s)	278, 596, 618, 946, 1441, 1567
BsaWI	WCCGGW	3 cut(s)	406, 676, 1519
Bsc4I	CCNNNNNNNGG	4 cut(s)	81, 514, 602, 1523
Bse118I	RCCGGY	4 cut(s)	283, 318, 406, 1519
Bse1I	ACTGG	2 cut(s)	607, 997
Bse3DI	GCAATG	3 cut(s)	470, 701, 1655
BseBI	CCWGG	3 cut(s)	280, 1183, 1568
BseDI	CCNNGG	6 cut(s)	278, 596, 618, 946, 1441, 1567
BseGI	GGATG	2 cut(s)	218, 685
BseLI	CCNNNNNNNGG	4 cut(s)	81, 514, 602, 1523
BseMI	GCAATG	3 cut(s)	470, 701, 1655
BseMII	CTCAG	6 cut(s)	130, 248, 824, 833, 1257, 1597
BseNI	ACTGG	2 cut(s)	607, 997
BseRI	GAGGAG	3 cut(s)	91, 215, 222
BseSI	GKGCMC	1 cut(s)	338
BseXI	GCAGC	5 cut(s)	33, 228, 1129, 1132, 1414
BseYI	CCCAGC	1 cut(s)	569
BsgI	GTGCAG	1 cut(s)	682
Bsh1236I	CGCG	3 cut(s)	50, 168, 510
Bsh1285I	CGRYCG	2 cut(s)	19, 147
BshFI	GGCC	1 cut(s)	283
BshNI	GGYRCC	1 cut(s)	321
BshTI	ACCGGT	2 cut(s)	406, 1519
BsiEI	CGRYCG	2 cut(s)	19, 147
BsiHKAI	GWGCWC	3 cut(s)	338, 897, 1424
BsiHKCI	CYCGRG	3 cut(s)	35, 197, 1596
BsiSI	CCGG	8 cut(s)	60, 284, 319, 407, 596, 677, 886, 1520
BslFI	GGGAC	3 cut(s)	613, 844, 1655
BslI	CCNNNNNNNGG	4 cut(s)	81, 514, 602, 1523
BsmAI	GTCTC	6 cut(s)	57, 145, 292, 297, 1069, 1304
BsmBI	CGTCTC	1 cut(s)	297
BsmFI	GGGAC	3 cut(s)	613, 844, 1655
BsnI	GGCC	1 cut(s)	283
Bso31I	GGTCTC	1 cut(s)	292
BsoBI	CYCGRG	3 cut(s)	35, 197, 1596
Bsp1286I	GDGCHC	3 cut(s)	338, 897, 1424
Bsp143I	GATC	6 cut(s)	53, 92, 967, 976, 1048, 1330
Bsp19I	CCATGG	1 cut(s)	618
BspACI	CCGC	8 cut(s)	19, 50, 57, 168, 219, 241, 508, 588
BspANI	GGCC	1 cut(s)	283
BspCNI	CTCAG	6 cut(s)	129, 247, 823, 832, 1258, 1596
BspFNI	CGCG	3 cut(s)	50, 168, 510
BspLI	GGNNCC	4 cut(s)	55, 323, 489, 675
BspPI	GGATC	3 cut(s)	48, 61, 1056
BspT107I	GGYRCC	1 cut(s)	321
BspTNI	GGTCTC	1 cut(s)	292
BsrDI	GCAATG	3 cut(s)	470, 701, 1655
BsrFI	RCCGGY	4 cut(s)	283, 318, 406, 1519
BsrI	ACTGG	2 cut(s)	607, 997
BssAI	RCCGGY	4 cut(s)	283, 318, 406, 1519
BssECI	CCNNGG	6 cut(s)	278, 596, 618, 946, 1441, 1567
BssMI	GATC	6 cut(s)	53, 92, 967, 976, 1048, 1330
BssNI	GRCGYC	1 cut(s)	322
BssT1I	CCWWGG	2 cut(s)	618, 946
Bst2UI	CCWGG	3 cut(s)	280, 1183, 1568
Bst4CI	ACNGT	4 cut(s)	487, 499, 1099, 1249
Bst6I	CTCTTC	1 cut(s)	518
BstACI	GRCGYC	1 cut(s)	322
BstAPI	GCANNNNNTGC	1 cut(s)	549
BstBAI	YACGTR	1 cut(s)	504
BstC8I	GCNNGC	3 cut(s)	134, 316, 320
BstDEI	CTNAG	9 cut(s)	42, 116, 234, 810, 819, 834, 1044, 1266, 1583
BstDSI	CCRYGG	2 cut(s)	618, 1441
BstF5I	GGATG	2 cut(s)	218, 685
BstFNI	CGCG	3 cut(s)	50, 168, 510
BstH2I	RGCGCY	1 cut(s)	325
BstHHI	GCGC	3 cut(s)	50, 168, 324
BstKTI	GATC	6 cut(s)	56, 95, 970, 979, 1051, 1333
BstMAI	GTCTC	6 cut(s)	57, 145, 292, 297, 1069, 1304
BstMBI	GATC	6 cut(s)	53, 92, 967, 976, 1048, 1330
BstMCI	CGRYCG	2 cut(s)	19, 147
BstMWI	GCNNNNNNNGC	4 cut(s)	56, 112, 274, 549
BstNI	CCWGG	3 cut(s)	280, 1183, 1568
BstNSI	RCATGY	2 cut(s)	1115, 1549
BstSCI	CCNGG	5 cut(s)	278, 595, 885, 1181, 1566
BstSFI	CTRYAG	1 cut(s)	1371
BstSLI	GKGCMC	1 cut(s)	338
BstUI	CGCG	3 cut(s)	50, 168, 510
BstV1I	GCAGC	5 cut(s)	33, 228, 1129, 1132, 1414
BstV2I	GAAGAC	2 cut(s)	821, 1385
BstX2I	RGATCY	2 cut(s)	53, 92
BstYI	RGATCY	2 cut(s)	53, 92
BsuI	GTATCC	1 cut(s)	1372
BsuRI	GGCC	1 cut(s)	283
BtgI	CCRYGG	2 cut(s)	618, 1441
BtrI	CACGTC	1 cut(s)	514
BtsCI	GGATG	2 cut(s)	218, 685
BtsI	GCAGTG	1 cut(s)	897
BtsIMutI	CAGTG	3 cut(s)	897, 1591, 1622
Cac8I	GCNNGC	3 cut(s)	134, 316, 320
CfoI	GCGC	3 cut(s)	50, 168, 324
Cfr10I	RCCGGY	4 cut(s)	283, 318, 406, 1519
Cfr13I	GGNCC	1 cut(s)	252
CseI	GACGC	2 cut(s)	13, 374
CspAI	ACCGGT	2 cut(s)	406, 1519
CspCI	CAANNNNNGTGG	4 cut(s)	1098, 1133, 1567, 1602
CviAII	CATG	7 cut(s)	549, 619, 899, 910, 1112, 1336, 1546
DdeI	CTNAG	9 cut(s)	42, 116, 234, 810, 819, 834, 1044, 1266, 1583
DinI	GGCGCC	1 cut(s)	323
DpnI	GATC	6 cut(s)	55, 94, 969, 978, 1050, 1332
DpnII	GATC	6 cut(s)	53, 92, 967, 976, 1048, 1330
DrdI	GACNNNNNNGTC	2 cut(s)	23, 1363
DseDI	GACNNNNNNGTC	2 cut(s)	23, 1363
Eam1104I	CTCTTC	1 cut(s)	518
EarI	CTCTTC	1 cut(s)	518
EciI	GGCGGA	1 cut(s)	46
Eco130I	CCWWGG	2 cut(s)	618, 946
Eco31I	GGTCTC	1 cut(s)	292
Eco47I	GGWCC	1 cut(s)	252
Eco57I	CTGAAG	1 cut(s)	779
Eco72I	CACGTG	1 cut(s)	504
Eco88I	CYCGRG	3 cut(s)	35, 197, 1596
EcoRI	GAATTC	1 cut(s)	1665
EcoRII	CCWGG	3 cut(s)	278, 1181, 1566
EcoT14I	CCWWGG	2 cut(s)	618, 946
EcoT22I	ATGCAT	3 cut(s)	554, 941, 1117
EgeI	GGCGCC	1 cut(s)	323
EheI	GGCGCC	1 cut(s)	323
ErhI	CCWWGG	2 cut(s)	618, 946
Esp3I	CGTCTC	1 cut(s)	297
FaeI	CATG	7 cut(s)	552, 622, 902, 913, 1115, 1339, 1549
FalI	AAGNNNNNCTT	2 cut(s)	1062, 1094
FaqI	GGGAC	3 cut(s)	613, 844, 1655
FatI	CATG	7 cut(s)	548, 618, 898, 909, 1111, 1335, 1545
FauI	CCCGC	2 cut(s)	43, 581
FbaI	TGATCA	1 cut(s)	1330
FblI	GTMKAC	1 cut(s)	193
Fnu4HI	GCNGC	7 cut(s)	22, 169, 217, 508, 1143, 1146, 1428
FokI	GGATG	2 cut(s)	225, 692
Fsp4HI	GCNGC	7 cut(s)	22, 169, 217, 508, 1143, 1146, 1428
FspBI	CTAG	2 cut(s)	947, 971
GlaI	GCGC	3 cut(s)	49, 167, 323
GluI	GCNGC	7 cut(s)	22, 169, 217, 508, 1143, 1146, 1428
GsaI	CCCAGC	1 cut(s)	573
GsuI	CTGGAG	3 cut(s)	554, 980, 1173
HaeII	RGCGCY	1 cut(s)	325
HaeIII	GGCC	1 cut(s)	283
HapII	CCGG	8 cut(s)	60, 284, 319, 407, 596, 677, 886, 1520
HgaI	GACGC	2 cut(s)	13, 374
HhaI	GCGC	3 cut(s)	50, 168, 324
Hin1I	GRCGYC	1 cut(s)	322
Hin1II	CATG	7 cut(s)	552, 622, 902, 913, 1115, 1339, 1549
Hin6I	GCGC	3 cut(s)	48, 166, 322
HinP1I	GCGC	3 cut(s)	48, 166, 322
HincII	GTYRAC	1 cut(s)	483
HindII	GTYRAC	1 cut(s)	483
HindIII	AAGCTT	1 cut(s)	1528
HpaII	CCGG	8 cut(s)	60, 284, 319, 407, 596, 677, 886, 1520
HphI	GGTGA	5 cut(s)	233, 655, 721, 1309, 1359
Hpy166II	GTNNAC	4 cut(s)	194, 336, 483, 1013
Hpy188III	TCNNGA	8 cut(s)	533, 671, 933, 1060, 1070, 1152, 1596, 1688
Hpy8I	GTNNAC	4 cut(s)	194, 336, 483, 1013
Hpy99I	CGWCG	4 cut(s)	29, 265, 268, 515
HpyAV	CCTTC	4 cut(s)	15, 457, 559, 1631
HpyCH4III	ACNGT	4 cut(s)	487, 499, 1099, 1249
HpyCH4IV	ACGT	2 cut(s)	503, 513
HpyF10VI	GCNNNNNNNGC	4 cut(s)	56, 112, 274, 549
HpyF3I	CTNAG	9 cut(s)	42, 116, 234, 810, 819, 834, 1044, 1266, 1583
HpySE526I	ACGT	2 cut(s)	503, 513
Hsp92I	GRCGYC	1 cut(s)	322
Hsp92II	CATG	7 cut(s)	552, 622, 902, 913, 1115, 1339, 1549
HspAI	GCGC	3 cut(s)	48, 166, 322
KasI	GGCGCC	1 cut(s)	321
KroI	GCCGGC	1 cut(s)	318
KroNI	GCCGGC	1 cut(s)	320
Ksp22I	TGATCA	1 cut(s)	1330
Kzo9I	GATC	6 cut(s)	53, 92, 967, 976, 1048, 1330
LmnI	GCTCC	3 cut(s)	445, 517, 900
Lsp1109I	GCAGC	5 cut(s)	33, 228, 1129, 1132, 1414
LweI	GCATC	4 cut(s)	203, 926, 1157, 1188
MaeI	CTAG	2 cut(s)	947, 971
MaeII	ACGT	2 cut(s)	503, 513
MaeIII	GTNAC	3 cut(s)	499, 1365, 1618
MalI	GATC	6 cut(s)	55, 94, 969, 978, 1050, 1332
MboI	GATC	6 cut(s)	53, 92, 967, 976, 1048, 1330
MboII	GAAGA	6 cut(s)	535, 785, 826, 1058, 1385, 1462
MfeI	CAATTG	2 cut(s)	963, 1191
MflI	RGATCY	2 cut(s)	53, 92
MhlI	GDGCHC	3 cut(s)	338, 897, 1424
Mly113I	GGCGCC	1 cut(s)	322
MlyI	GAGTC	5 cut(s)	47, 59, 189, 223, 811
MmeI	TCCRAC	4 cut(s)	187, 666, 843, 1504
Mph1103I	ATGCAT	3 cut(s)	554, 941, 1117
MreI	CGCCGGCG	1 cut(s)	318
MroNI	GCCGGC	1 cut(s)	318
MroXI	GAANNNNTTC	2 cut(s)	368, 1259
MseI	TTAA	5 cut(s)	399, 872, 1004, 1235, 1475
MslI	CAYNNNNRTG	1 cut(s)	1440
MspA1I	CMGCKG	1 cut(s)	219
MspI	CCGG	8 cut(s)	60, 284, 319, 407, 596, 677, 886, 1520
MspR9I	CCNGG	5 cut(s)	280, 597, 887, 1183, 1568
MunI	CAATTG	2 cut(s)	963, 1191
MvaI	CCWGG	3 cut(s)	280, 1183, 1568
MvnI	CGCG	3 cut(s)	50, 168, 510
MwoI	GCNNNNNNNGC	4 cut(s)	56, 112, 274, 549
NaeI	GCCGGC	1 cut(s)	320
NarI	GGCGCC	1 cut(s)	322
NciI	CCSGG	2 cut(s)	597, 887
NcoI	CCATGG	1 cut(s)	618
NdeII	GATC	6 cut(s)	53, 92, 967, 976, 1048, 1330
NgoMIV	GCCGGC	1 cut(s)	318
NlaIII	CATG	7 cut(s)	552, 622, 902, 913, 1115, 1339, 1549
NlaIV	GGNNCC	4 cut(s)	55, 323, 489, 675
NmuCI	GTSAC	3 cut(s)	499, 1365, 1618
NsiI	ATGCAT	3 cut(s)	554, 941, 1117
NspI	RCATGY	2 cut(s)	1115, 1549
PaeR7I	CTCGAG	2 cut(s)	35, 197
PcsI	WCGNNNNNNNCGW	2 cut(s)	33, 266
PdiI	GCCGGC	1 cut(s)	320
PdmI	GAANNNNTTC	2 cut(s)	368, 1259
PfeI	GAWTC	5 cut(s)	257, 430, 1063, 1220, 1255
PflFI	GACNNNGTC	1 cut(s)	820
PflMI	CCANNNNNTGG	1 cut(s)	1523
PfoI	TCCNGGA	1 cut(s)	1181
PinAI	ACCGGT	2 cut(s)	406, 1519
PkrI	GCNGC	7 cut(s)	23, 170, 218, 509, 1144, 1147, 1429
PleI	GAGTC	5 cut(s)	46, 59, 189, 223, 811
PluTI	GGCGCC	1 cut(s)	325
PmaCI	CACGTG	1 cut(s)	504
PmlI	CACGTG	1 cut(s)	504
PpsI	GAGTC	5 cut(s)	46, 59, 189, 223, 811
Ppu21I	YACGTR	1 cut(s)	504
PsiI	TTATAA	2 cut(s)	1025, 1415
Psp6I	CCWGG	3 cut(s)	278, 1181, 1566
PspCI	CACGTG	1 cut(s)	504
PspFI	CCCAGC	1 cut(s)	569
PspGI	CCWGG	3 cut(s)	278, 1181, 1566
PspN4I	GGNNCC	4 cut(s)	55, 323, 489, 675
PspPI	GGNCC	1 cut(s)	252
PspXI	VCTCGAGB	2 cut(s)	35, 197
PsuI	RGATCY	2 cut(s)	53, 92
PsyI	GACNNNGTC	1 cut(s)	820
RseI	CAYNNNNRTG	1 cut(s)	1440
SaqAI	TTAA	5 cut(s)	399, 872, 1004, 1235, 1475
SatI	GCNGC	7 cut(s)	22, 169, 217, 508, 1143, 1146, 1428
Sau3AI	GATC	6 cut(s)	53, 92, 967, 976, 1048, 1330
Sau96I	GGNCC	1 cut(s)	252
SchI	GAGTC	5 cut(s)	47, 59, 189, 223, 811
ScrFI	CCNGG	5 cut(s)	280, 597, 887, 1183, 1568
SduI	GDGCHC	3 cut(s)	338, 897, 1424
SfaNI	GCATC	4 cut(s)	203, 926, 1157, 1188
SfcI	CTRYAG	1 cut(s)	1371
SfoI	GGCGCC	1 cut(s)	323
Sfr274I	CTCGAG	2 cut(s)	35, 197
SgrAI	CRCCGGYG	1 cut(s)	318
SinI	GGWCC	1 cut(s)	252
SlaI	CTCGAG	2 cut(s)	35, 197
SmiMI	CAYNNNNRTG	1 cut(s)	1440
SmlI	CTYRAG	4 cut(s)	35, 197, 1058, 1688
SmoI	CTYRAG	4 cut(s)	35, 197, 1058, 1688
SsiI	CCGC	8 cut(s)	19, 50, 57, 168, 219, 241, 508, 588
SspDI	GGCGCC	1 cut(s)	321
SspMI	CTAG	2 cut(s)	947, 971
StyD4I	CCNGG	5 cut(s)	278, 595, 885, 1181, 1566
StyI	CCWWGG	2 cut(s)	618, 946
TaaI	ACNGT	4 cut(s)	487, 499, 1099, 1249
TaiI	ACGT	2 cut(s)	506, 516
TaqI	TCGA	4 cut(s)	27, 36, 198, 1505
TaqII	GACCGA	1 cut(s)	133
TauI	GCSGC	2 cut(s)	171, 510
TfiI	GAWTC	5 cut(s)	257, 430, 1063, 1220, 1255
Tru1I	TTAA	5 cut(s)	399, 872, 1004, 1235, 1475
Tru9I	TTAA	5 cut(s)	399, 872, 1004, 1235, 1475
TscAI	CASTG	3 cut(s)	897, 1591, 1629
TseFI	GTSAC	3 cut(s)	499, 1365, 1618
TseI	GCWGC	5 cut(s)	21, 216, 1142, 1145, 1427
Tsp45I	GTSAC	3 cut(s)	499, 1365, 1618
TspDTI	ATGAA	7 cut(s)	125, 140, 287, 314, 898, 1230, 1650
TspGWI	ACGGA	3 cut(s)	97, 142, 1430
TspRI	CASTG	3 cut(s)	897, 1591, 1629
Tth111I	GACNNNGTC	1 cut(s)	820
Van91I	CCANNNNNTGG	1 cut(s)	1523
VneI	GTGCAC	1 cut(s)	334
VpaK11BI	GGWCC	1 cut(s)	252
XapI	RAATTY	5 cut(s)	328, 1053, 1237, 1535, 1665
XceI	RCATGY	2 cut(s)	1115, 1549
XhoI	CTCGAG	2 cut(s)	35, 197
XmaJI	CCTAGG	1 cut(s)	946
XmiI	GTMKAC	1 cut(s)	193
XmnI	GAANNNNTTC	2 cut(s)	368, 1259
XspI	CTAG	2 cut(s)	947, 971
Zsp2I	ATGCAT	3 cut(s)	554, 941, 1117

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.