Rorug01G0059100

Cell division control protein

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
9684812 .. 9685039
228 bp
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UTR
Exon/CDS
Intron
Rorug01G0059100.1

Sequence Viewer

Length: 228 bp
ATGTTCATCTTTTGGAGATCAGTAGTAATCAATCAAGATTTGTTGTCTAGGTTGCTGATGGAGACATATAGCGACGGGCAAGAGATGAAGGAATCAGACATTGGCAACAAGTTGTATGGTCTCATAATCGGTGCTAATTACGACAACATAAGCACTACTTTGGTCTCCATAGTCATGCATCTGTCGCAGCTTCCTCATGTTTATGATACTGTACTAAAAGGTAAATAG

Protein Analysis

75

Amino Acids

8.56

Weight (kDa)

5.45

Isoelectric Point (pI)

41.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 213
AjuI GAANNNNNNNTTGG 2 cut(s) 84, 116
AluBI AGCT 1 cut(s) 190
AluI AGCT 1 cut(s) 190
Alw26I GTCTC 3 cut(s) 56, 125, 169
ApeKI GCWGC 1 cut(s) 187
BbvI GCAGC 1 cut(s) 199
BccI CCATC 1 cut(s) 52
BcoDI GTCTC 3 cut(s) 56, 125, 169
BfaI CTAG 1 cut(s) 48
BisI GCNGC 1 cut(s) 188
BlsI GCNGC 1 cut(s) 189
BmsI GCATC 1 cut(s) 187
BsaI GGTCTC 2 cut(s) 125, 169
BseXI GCAGC 1 cut(s) 199
BsmAI GTCTC 3 cut(s) 56, 125, 169
Bso31I GGTCTC 2 cut(s) 125, 169
Bsp143I GATC 1 cut(s) 17
BspTNI GGTCTC 2 cut(s) 125, 169
BssMI GATC 1 cut(s) 17
Bst4CI ACNGT 1 cut(s) 211
BstKTI GATC 1 cut(s) 20
BstMAI GTCTC 3 cut(s) 56, 125, 169
BstMBI GATC 1 cut(s) 17
BstMWI GCNNNNNNNGC 1 cut(s) 184
BstV1I GCAGC 1 cut(s) 199
Csp6I GTAC 1 cut(s) 212
CviAII CATG 2 cut(s) 175, 197
CviJI RGCY 1 cut(s) 190
CviKI_1 RGCY 1 cut(s) 190
CviQI GTAC 1 cut(s) 212
DpnI GATC 1 cut(s) 19
DpnII GATC 1 cut(s) 17
Eco31I GGTCTC 2 cut(s) 125, 169
EcoT22I ATGCAT 1 cut(s) 180
FaeI CATG 2 cut(s) 178, 200
FaiI YATR 9 cut(s) 67, 69, 117, 125, 149, 170, 176, 198, 204
FalI AAGNNNNNCTT 2 cut(s) 142, 174
FatI CATG 2 cut(s) 174, 196
Fnu4HI GCNGC 1 cut(s) 188
Fsp4HI GCNGC 1 cut(s) 188
FspBI CTAG 1 cut(s) 48
GluI GCNGC 1 cut(s) 188
Hin1II CATG 2 cut(s) 178, 200
HinfI GANTC 1 cut(s) 92
Hpy188I TCNGA 1 cut(s) 97
Hpy188III TCNNGA 1 cut(s) 35
Hpy99I CGWCG 1 cut(s) 77
HpyAV CCTTC 1 cut(s) 82
HpyCH4III ACNGT 1 cut(s) 211
HpyCH4V TGCA 1 cut(s) 178
HpyF10VI GCNNNNNNNGC 1 cut(s) 184
Hsp92II CATG 2 cut(s) 178, 200
Kzo9I GATC 1 cut(s) 17
Lsp1109I GCAGC 1 cut(s) 199
LweI GCATC 1 cut(s) 187
MaeI CTAG 1 cut(s) 48
MalI GATC 1 cut(s) 19
MboI GATC 1 cut(s) 17
MluCI AATT 1 cut(s) 136
MnlI CCTC 1 cut(s) 204
Mph1103I ATGCAT 1 cut(s) 180
MslI CAYNNNNRTG 2 cut(s) 173, 201
MwoI GCNNNNNNNGC 1 cut(s) 184
NdeII GATC 1 cut(s) 17
NlaIII CATG 2 cut(s) 178, 200
NsiI ATGCAT 1 cut(s) 180
PfeI GAWTC 1 cut(s) 92
PkrI GCNGC 1 cut(s) 189
RsaI GTAC 1 cut(s) 213
RsaNI GTAC 1 cut(s) 212
RseI CAYNNNNRTG 2 cut(s) 173, 201
SatI GCNGC 1 cut(s) 188
Sau3AI GATC 1 cut(s) 17
SetI ASST 3 cut(s) 53, 192, 223
SfaNI GCATC 1 cut(s) 187
SgeI CNNG 7 cut(s) 47, 60, 88, 92, 121, 187, 209
SmiMI CAYNNNNRTG 2 cut(s) 173, 201
Sse9I AATT 1 cut(s) 136
SspMI CTAG 1 cut(s) 48
TaaI ACNGT 1 cut(s) 211
TasI AATT 1 cut(s) 136
TatI WGTACW 1 cut(s) 211
TfiI GAWTC 1 cut(s) 92
TseI GCWGC 1 cut(s) 187
TspDTI ATGAA 1 cut(s) 101
XspI CTAG 1 cut(s) 48
Zsp2I ATGCAT 1 cut(s) 180
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.