Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0002119

Physical Location & Seq

Genomic Coordinates Forward (+)

74024525 .. 74028635

Gene Structure 4111 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G042190.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGCCTTCCATCGCCGACCGCAGCGTTGAACTCGAATCCAACGCCGTTGGATCTGCAGCAGTTTCTACTCCTCCGAAACGGAGGCTGAGATCCAATTCGTCGCCGATGAAGCTGAGTCCGATGAAGTGCAAGCGCGTCGGAATTTCTTCCGTCGCGAAATTACGCAGCGTTGAGGTCGAATCGGAGAGGAGCGTGGAGGAGGTAGTCGGATCCGGCGGTGATTTGACTCCTCAGAAGTGGAAATTGAGGTCCGATTCGTCGTCGCCGATGAAGTGTAAATCGGCTCGCCGGAACCTCAGTGCTTGCACCAGCACTCCTGCAAATGGAATTGAGAAGTATTTCAGTCAGAAAAAGCCTCAAGCCTTTTGCAAACCACCGGTTGTTGTTAAGCCGAATTGGAATCCCAGAGATAAGGAGCAGATGAGGATAGCGAAGGAGGTATTGCACTTGTCTACGGTCCCCTCTACTGTTGCGTGCCGCGATGTGGAGCAGAAGAGGGTTCTGGAGTTCTGCAAGTCATGCATAGAGCAAGAGAAGGCCGGGAGTTTATATGTGTGCGGCTGTCCTGGGACCGGAAAGTCCTTGTCCATGGAGAAAGTGAAACAGCTTTTGGTGAATTGGGCAGGAGATATGAAGTGTTTGACACTGAATTGTTTTAACTACCAGGGTGGATTTCAGGAACCAGATGTGTTGGAATTGAACTGTACATCGCTAACAAAAACTTCTGATATTTTCGCAAATATACTTGGTAAATACCAACCTCAAAAGAAAGCTAATGGCACTACCTCCCTGCAACTTCTTCAGAAATTATATTCTCAAAAACCTCAGTCAGATGGGACTAAGATGATGTTGATAATAGCTGATGAGTTGGATTACTTAATCACTAAAGACCGGGCAGTGCTCCATGACCTTTTCATGCTCACAACATACCCATTCTCAAGATGTATACTTTTAGGAGTAGCAAATGCAATCGACTTAGCTGATCGTTTTGTTCCAAAACTTCAGTCATTAAATTGTAAGCCTATGGTTATAACTTTTCGGGCATACTCTAAGGATCAGATTCTCAAGATTCTCCAAGAGAGGCTTATGGCACTACCTTACACTGTTTTTCAACCACATGCATTGGAACTTTGTGCCAGAAAAGTTGCTGCTGCATCTGGAGATATGAGGAAAGCTCTCTGTATTTCCAGGAGTGCAATTGAGATGCTGGAAGCAGAGTTGAGAGAATCTACTGACAAGTTAAACTCATCAACAGCAGAGAATCCATTCTCTGAGCAACAGACAGCTCCAGCTCTTGCTCTGGTGAAAAAACAGGAGATTGATATTGTGAGAATTGATCACATGGCCATTGCTTTGTCAAAGACATTCAAGTCACCAGTAGTGGATACCATACAATGTCTTCCTCAACATCAACAGATTATAATGTGCTCTGCTGCAAAGCATTTCCGTGGTGTGAAGAAAGATACAACTATAGGAGAGTTAAATAAATCTTACTTAGACATCTGCAAAGCAACACTAATTCCCCCAGTTGGAAGTTTTGAATTTTCAAGTATGTGCAAAGTGCTAAATGACCAGGGCCTCCTCAAACTCAGTGGCCAATCCAGAGATATAAAATCCAAGAGAGTGACATTGAATGTAGATGAAGGGGACATCACATTTGCATTGCAGGGAATCCGGTTTTTCCGGACTTGTCTTGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006725 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0022402 GO:0034641 GO:0034645 GO:0042023 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044786 GO:0046483 GO:0071704 GO:0090304 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 map04110 map04111 map04113

Pfam Domains

Protein Families

AAA_22 Cdc6_C

Protein Analysis

566

Amino Acids

62.84

Weight (kDa)

9.19

Isoelectric Point (pI)

50.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_22	PF13401	179 - 308	6.2e-12	AAA domain
Cdc6-ORC-like_ATPase_lid	PF22606	349 - 406	2.1e-11	Cdc6/ORC-like, ATPase lid domain
WHD_Cdc6	PF09079	462 - 554	4.1e-20	CDC6, C terminal winged helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002119)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07270 AT1G07270 AT2G29680 AT2G29680
fragaria_vesca	FvH4_3g38340 FvH4_3g38340 FvH4_3g38340 FvH4_3g38340 FvH4_3g38340
malus_domestica	MD03G1072700.v1.1 MD11G1078800.v1.1
prunus_persica	Prupe.6G059500_v2.0.a1
pyrus_communis	pycom03g05890 pycom11g06590
rosa_chinensis	RchiOBHm_Chr2g0157131 RchiOBHm_Chr4g0399271 RchiOBHm_Chr5g0068951
rosa_laevigata	RLG00000020961 RLG00000036023
rosa_multiflora	Rmu_sc0001960.1_g000002 Rmu_sc0003822.1_g000023 Rmu_sc0010302.1_g000001
rosa_roxburghii	Rroxscaffold_1G00011800 Rroxscaffold_1G00029470 Rroxscaffold_2G00092520
rosa_rugosa	Rorug01G0058900 Rorug01G0059000 Rorug01G0059100 Rorug01G0059200 Rorug05G0394800 Rorug07G0214100 Rorug07G0214200 Rorug07G0214300
rosa_samantha	Rh2BG537600 Rh2DG546400 Rh4AG092800 Rh4CG101200 Rh5BG470900 Rh5CG493400 Rh7BG347600
rosa_wichuraiana	Rw2G031040 Rw2G043260 Rw4G007640 Rw5G042190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1031, 1421
AasI	GACNNNNNNGTC	2 cut(s)	577, 1369
AccI	GTMKAC	2 cut(s)	452, 946
AccII	CGCG	3 cut(s)	135, 155, 480
AccIII	TCCGGA	1 cut(s)	1683
AciI	CCGC	4 cut(s)	19, 216, 478, 558
AclWI	GGATC	5 cut(s)	58, 84, 204, 217, 1062
AcoI	YGGCCR	2 cut(s)	1344, 1594
AcsI	RAATTY	2 cut(s)	141, 1541
AcuI	CTGAAG	2 cut(s)	785, 986
AfaI	GTAC	1 cut(s)	706
AfiI	CCNNNNNNNGG	4 cut(s)	323, 484, 572, 1529
AgeI	ACCGGT	1 cut(s)	376
AgsI	TTSAA	7 cut(s)	29, 700, 1112, 1369, 1541, 1548, 1633
AjnI	CCWGG	4 cut(s)	565, 663, 1187, 1572
AjuI	GAANNNNNNNTTGG	2 cut(s)	593, 625
AluBI	AGCT	8 cut(s)	112, 607, 773, 860, 980, 1175, 1286, 1292
AluI	AGCT	8 cut(s)	112, 607, 773, 860, 980, 1175, 1286, 1292
Alw21I	GWGCWC	2 cut(s)	903, 1430
AlwI	GGATC	5 cut(s)	58, 84, 204, 217, 1062
Aor13HI	TCCGGA	1 cut(s)	1683
AoxI	GGCC	4 cut(s)	537, 1344, 1576, 1594
ApeKI	GCWGC	6 cut(s)	21, 56, 165, 1148, 1151, 1433
ApoI	RAATTY	2 cut(s)	141, 1541
ArsI	GACNNNNNNTTYG	4 cut(s)	989, 1021, 1640, 1672
AsiGI	ACCGGT	1 cut(s)	376
Asp700I	GAANNNNTTC	3 cut(s)	145, 338, 1265
AspLEI	GCGC	1 cut(s)	135
AspS9I	GGNCC	4 cut(s)	249, 457, 570, 1576
AsuC2I	CCSGG	2 cut(s)	541, 893
AsuHPI	GGTGA	4 cut(s)	230, 625, 1315, 1365
AvaII	GGWCC	3 cut(s)	249, 457, 570
BalI	TGGCCA	2 cut(s)	1346, 1596
BamHI	GGATCC	1 cut(s)	209
BbsI	GAAGAC	1 cut(s)	1391
Bbv12I	GWGCWC	2 cut(s)	903, 1430
BbvI	GCAGC	6 cut(s)	33, 68, 177, 1135, 1138, 1420
BccI	CCATC	2 cut(s)	17, 827
BceAI	ACGGC	1 cut(s)	29
BcgI	CGANNNNNNTGC	2 cut(s)	118, 152
BciT130I	CCWGG	4 cut(s)	567, 665, 1189, 1574
BciVI	GTATCC	1 cut(s)	1378
BclI	TGATCA	1 cut(s)	1336
BcnI	CCSGG	2 cut(s)	541, 893
BfmI	CTRYAG	2 cut(s)	54, 1470
BfuI	GTATCC	1 cut(s)	1378
BisI	GCNGC	8 cut(s)	22, 57, 166, 478, 559, 1149, 1152, 1434
BlsI	GCNGC	8 cut(s)	23, 58, 167, 479, 560, 1150, 1153, 1435
Bme1390I	CCNGG	6 cut(s)	541, 567, 665, 893, 1189, 1574
Bme18I	GGWCC	3 cut(s)	249, 457, 570
BmgT120I	GGNCC	4 cut(s)	249, 457, 570, 1576
BmiI	GGNNCC	5 cut(s)	211, 293, 459, 571, 681
BmrFI	CCNGG	6 cut(s)	541, 567, 665, 893, 1189, 1574
BmrI	ACTGGG	1 cut(s)	1520
BmsI	GCATC	2 cut(s)	1163, 1194
BmuI	ACTGGG	1 cut(s)	1520
BpiI	GAAGAC	1 cut(s)	1391
BplI	GAGNNNNNCTC	2 cut(s)	1159, 1191
BpmI	CTGGAG	3 cut(s)	524, 1179, 1272
BpuEI	CTTGAG	3 cut(s)	342, 922, 1049
BpuMI	CCSGG	2 cut(s)	541, 893
BsaJI	CCNNGG	5 cut(s)	566, 588, 664, 1447, 1573
BsaWI	WCCGGW	4 cut(s)	376, 572, 1674, 1683
BsaXI	ACNNNNNCTCC	2 cut(s)	298, 328
Bsc4I	CCNNNNNNNGG	4 cut(s)	323, 484, 572, 1529
Bse118I	RCCGGY	1 cut(s)	376
Bse1I	ACTGG	2 cut(s)	1376, 1526
Bse3DI	GCAATG	2 cut(s)	1347, 1661
BseAI	TCCGGA	1 cut(s)	1683
BseBI	CCWGG	4 cut(s)	567, 665, 1189, 1574
BseDI	CCNNGG	5 cut(s)	566, 588, 664, 1447, 1573
BseLI	CCNNNNNNNGG	4 cut(s)	323, 484, 572, 1529
BseMI	GCAATG	2 cut(s)	1347, 1661
BseMII	CTCAG	7 cut(s)	77, 104, 245, 310, 839, 1263, 1603
BseNI	ACTGG	2 cut(s)	1376, 1526
BseRI	GAGGAG	5 cut(s)	60, 202, 212, 219, 1571
BseXI	GCAGC	6 cut(s)	33, 68, 177, 1135, 1138, 1420
Bsh1236I	CGCG	3 cut(s)	135, 155, 480
Bsh1285I	CGRYCG	1 cut(s)	19
BshFI	GGCC	4 cut(s)	539, 1346, 1578, 1596
BshTI	ACCGGT	1 cut(s)	376
BsiEI	CGRYCG	1 cut(s)	19
BsiHKAI	GWGCWC	2 cut(s)	903, 1430
BsiSI	CCGG	8 cut(s)	213, 289, 377, 540, 573, 892, 1675, 1684
BslFI	GGGAC	4 cut(s)	443, 583, 850, 1661
BslI	CCNNNNNNNGG	4 cut(s)	323, 484, 572, 1529
BsmFI	GGGAC	4 cut(s)	443, 583, 850, 1661
BsnI	GGCC	4 cut(s)	539, 1346, 1578, 1596
Bsp1286I	GDGCHC	2 cut(s)	903, 1430
Bsp13I	TCCGGA	1 cut(s)	1683
Bsp1407I	TGTACA	1 cut(s)	704
Bsp143I	GATC	6 cut(s)	50, 89, 209, 982, 1054, 1336
Bsp19I	CCATGG	1 cut(s)	588
Bsp68I	TCGCGA	1 cut(s)	155
BspACI	CCGC	4 cut(s)	19, 216, 478, 558
BspANI	GGCC	4 cut(s)	539, 1346, 1578, 1596
BspCNI	CTCAG	7 cut(s)	78, 105, 244, 309, 838, 1264, 1602
BspEI	TCCGGA	1 cut(s)	1683
BspFNI	CGCG	3 cut(s)	135, 155, 480
BspLI	GGNNCC	5 cut(s)	211, 293, 459, 571, 681
BspMAI	CTGCAG	1 cut(s)	58
BspPI	GGATC	5 cut(s)	58, 84, 204, 217, 1062
BsrDI	GCAATG	2 cut(s)	1347, 1661
BsrFI	RCCGGY	1 cut(s)	376
BsrGI	TGTACA	1 cut(s)	704
BsrI	ACTGG	2 cut(s)	1376, 1526
BssAI	RCCGGY	1 cut(s)	376
BssECI	CCNNGG	5 cut(s)	566, 588, 664, 1447, 1573
BssMI	GATC	6 cut(s)	50, 89, 209, 982, 1054, 1336
BssNAI	GTATAC	1 cut(s)	947
BssT1I	CCWWGG	1 cut(s)	588
Bst1107I	GTATAC	1 cut(s)	947
Bst2UI	CCWGG	4 cut(s)	567, 665, 1189, 1574
Bst4CI	ACNGT	4 cut(s)	457, 469, 704, 1105
Bst6I	CTCTTC	1 cut(s)	488
BstAPI	GCANNNNNTGC	1 cut(s)	519
BstAUI	TGTACA	1 cut(s)	704
BstC8I	GCNNGC	4 cut(s)	131, 286, 304, 475
BstDSI	CCRYGG	2 cut(s)	588, 1447
BstFNI	CGCG	3 cut(s)	135, 155, 480
BstHHI	GCGC	1 cut(s)	135
BstKTI	GATC	6 cut(s)	53, 92, 212, 985, 1057, 1339
BstMBI	GATC	6 cut(s)	50, 89, 209, 982, 1054, 1336
BstMCI	CGRYCG	1 cut(s)	19
BstMWI	GCNNNNNNNGC	2 cut(s)	109, 519
BstNI	CCWGG	4 cut(s)	567, 665, 1189, 1574
BstNSI	RCATGY	1 cut(s)	1121
BstSCI	CCNGG	6 cut(s)	539, 565, 663, 891, 1187, 1572
BstSFI	CTRYAG	2 cut(s)	54, 1470
BstUI	CGCG	3 cut(s)	135, 155, 480
BstV1I	GCAGC	6 cut(s)	33, 68, 177, 1135, 1138, 1420
BstV2I	GAAGAC	1 cut(s)	1391
BstX2I	RGATCY	3 cut(s)	50, 89, 209
BstYI	RGATCY	3 cut(s)	50, 89, 209
BstZ17I	GTATAC	1 cut(s)	947
BsuI	GTATCC	1 cut(s)	1378
BsuRI	GGCC	4 cut(s)	539, 1346, 1578, 1596
BtgI	CCRYGG	2 cut(s)	588, 1447
BtgZI	GCGATG	2 cut(s)	495, 693
BtsI	GCAGTG	1 cut(s)	903
BtsIMutI	CAGTG	5 cut(s)	304, 644, 903, 1101, 1597
BtuMI	TCGCGA	1 cut(s)	155
Cac8I	GCNNGC	4 cut(s)	131, 286, 304, 475
CfoI	GCGC	1 cut(s)	135
Cfr10I	RCCGGY	1 cut(s)	376
Cfr13I	GGNCC	4 cut(s)	249, 457, 570, 1576
CseI	GACGC	1 cut(s)	124
Csp6I	GTAC	1 cut(s)	705
CspAI	ACCGGT	1 cut(s)	376
CspCI	CAANNNNNGTGG	4 cut(s)	1104, 1139, 1573, 1608
CviAII	CATG	6 cut(s)	519, 589, 905, 916, 1118, 1342
CviQI	GTAC	1 cut(s)	705
DpnI	GATC	6 cut(s)	52, 91, 211, 984, 1056, 1338
DpnII	GATC	6 cut(s)	50, 89, 209, 982, 1054, 1336
DrdI	GACNNNNNNGTC	2 cut(s)	577, 1369
DseDI	GACNNNNNNGTC	2 cut(s)	577, 1369
EaeI	YGGCCR	2 cut(s)	1344, 1594
Eam1104I	CTCTTC	1 cut(s)	488
EarI	CTCTTC	1 cut(s)	488
Eco130I	CCWWGG	1 cut(s)	588
Eco47I	GGWCC	3 cut(s)	249, 457, 570
Eco57I	CTGAAG	2 cut(s)	785, 986
EcoO109I	RGGNCCY	1 cut(s)	1576
EcoRII	CCWGG	4 cut(s)	565, 663, 1187, 1572
EcoT14I	CCWWGG	1 cut(s)	588
EcoT22I	ATGCAT	2 cut(s)	524, 1123
ErhI	CCWWGG	1 cut(s)	588
FaeI	CATG	6 cut(s)	522, 592, 908, 919, 1121, 1345
FalI	AAGNNNNNCTT	2 cut(s)	1068, 1100
FaqI	GGGAC	4 cut(s)	443, 583, 850, 1661
FatI	CATG	6 cut(s)	518, 588, 904, 915, 1117, 1341
FbaI	TGATCA	1 cut(s)	1336
FblI	GTMKAC	2 cut(s)	452, 946
Fnu4HI	GCNGC	8 cut(s)	22, 57, 166, 478, 559, 1149, 1152, 1434
Fsp4HI	GCNGC	8 cut(s)	22, 57, 166, 478, 559, 1149, 1152, 1434
GlaI	GCGC	1 cut(s)	134
GluI	GCNGC	8 cut(s)	22, 57, 166, 478, 559, 1149, 1152, 1434
GsuI	CTGGAG	3 cut(s)	524, 1179, 1272
HaeIII	GGCC	4 cut(s)	539, 1346, 1578, 1596
HapII	CCGG	8 cut(s)	213, 289, 377, 540, 573, 892, 1675, 1684
HgaI	GACGC	1 cut(s)	124
HhaI	GCGC	1 cut(s)	135
Hin1II	CATG	6 cut(s)	522, 592, 908, 919, 1121, 1345
Hin6I	GCGC	1 cut(s)	133
HinP1I	GCGC	1 cut(s)	133
HpaII	CCGG	8 cut(s)	213, 289, 377, 540, 573, 892, 1675, 1684
HphI	GGTGA	4 cut(s)	230, 625, 1315, 1365
Hpy166II	GTNNAC	2 cut(s)	453, 947
Hpy188III	TCNNGA	9 cut(s)	154, 503, 677, 939, 1066, 1158, 1602, 1684, 1694
Hpy8I	GTNNAC	2 cut(s)	453, 947
Hpy99I	CGWCG	5 cut(s)	103, 140, 155, 262, 265
HpyAV	CCTTC	4 cut(s)	15, 427, 529, 1637
HpyCH4III	ACNGT	4 cut(s)	457, 469, 704, 1105
HpyF10VI	GCNNNNNNNGC	2 cut(s)	109, 519
Hsp92II	CATG	6 cut(s)	522, 592, 908, 919, 1121, 1345
HspAI	GCGC	1 cut(s)	133
Kpn2I	TCCGGA	1 cut(s)	1683
Ksp22I	TGATCA	1 cut(s)	1336
Kzo9I	GATC	6 cut(s)	50, 89, 209, 982, 1054, 1336
LmnI	GCTCC	5 cut(s)	189, 415, 487, 906, 1291
Lsp1109I	GCAGC	6 cut(s)	33, 68, 177, 1135, 1138, 1420
LweI	GCATC	2 cut(s)	1163, 1194
MaeIII	GTNAC	2 cut(s)	1371, 1624
MalI	GATC	6 cut(s)	52, 91, 211, 984, 1056, 1338
MboI	GATC	6 cut(s)	50, 89, 209, 982, 1054, 1336
MboII	GAAGA	5 cut(s)	138, 505, 791, 1391, 1468
MfeI	CAATTG	1 cut(s)	1197
MflI	RGATCY	3 cut(s)	50, 89, 209
MhlI	GDGCHC	2 cut(s)	903, 1430
MlsI	TGGCCA	2 cut(s)	1346, 1596
MluNI	TGGCCA	2 cut(s)	1346, 1596
MlyI	GAGTC	2 cut(s)	124, 220
MmeI	TCCRAC	7 cut(s)	28, 63, 118, 187, 672, 849, 1510
Mox20I	TGGCCA	2 cut(s)	1346, 1596
Mph1103I	ATGCAT	2 cut(s)	524, 1123
MroI	TCCGGA	1 cut(s)	1683
MroXI	GAANNNNTTC	3 cut(s)	145, 338, 1265
MscI	TGGCCA	2 cut(s)	1346, 1596
MseI	TTAA	6 cut(s)	387, 657, 878, 1010, 1241, 1481
MslI	CAYNNNNRTG	1 cut(s)	1446
Msp20I	TGGCCA	2 cut(s)	1346, 1596
MspI	CCGG	8 cut(s)	213, 289, 377, 540, 573, 892, 1675, 1684
MspR9I	CCNGG	6 cut(s)	541, 567, 665, 893, 1189, 1574
MunI	CAATTG	1 cut(s)	1197
MvaI	CCWGG	4 cut(s)	567, 665, 1189, 1574
MvnI	CGCG	3 cut(s)	135, 155, 480
MwoI	GCNNNNNNNGC	2 cut(s)	109, 519
NciI	CCSGG	2 cut(s)	541, 893
NcoI	CCATGG	1 cut(s)	588
NdeII	GATC	6 cut(s)	50, 89, 209, 982, 1054, 1336
NlaIII	CATG	6 cut(s)	522, 592, 908, 919, 1121, 1345
NlaIV	GGNNCC	5 cut(s)	211, 293, 459, 571, 681
NmuCI	GTSAC	2 cut(s)	1371, 1624
NruI	TCGCGA	1 cut(s)	155
NsiI	ATGCAT	2 cut(s)	524, 1123
NspI	RCATGY	1 cut(s)	1121
PcsI	WCGNNNNNNNCGW	1 cut(s)	263
PdmI	GAANNNNTTC	3 cut(s)	145, 338, 1265
PfeI	GAWTC	9 cut(s)	35, 179, 254, 400, 1060, 1069, 1226, 1261, 1671
PfoI	TCCNGGA	1 cut(s)	1187
PinAI	ACCGGT	1 cut(s)	376
PkrI	GCNGC	8 cut(s)	23, 58, 167, 479, 560, 1150, 1153, 1435
PleI	GAGTC	2 cut(s)	123, 220
PpsI	GAGTC	2 cut(s)	123, 220
PsiI	TTATAA	2 cut(s)	1031, 1421
Psp6I	CCWGG	4 cut(s)	565, 663, 1187, 1572
PspGI	CCWGG	4 cut(s)	565, 663, 1187, 1572
PspN4I	GGNNCC	5 cut(s)	211, 293, 459, 571, 681
PspPI	GGNCC	4 cut(s)	249, 457, 570, 1576
PstI	CTGCAG	1 cut(s)	58
PsuI	RGATCY	3 cut(s)	50, 89, 209
RruI	TCGCGA	1 cut(s)	155
RsaI	GTAC	1 cut(s)	706
RsaNI	GTAC	1 cut(s)	705
RseI	CAYNNNNRTG	1 cut(s)	1446
SaqAI	TTAA	6 cut(s)	387, 657, 878, 1010, 1241, 1481
SatI	GCNGC	8 cut(s)	22, 57, 166, 478, 559, 1149, 1152, 1434
Sau3AI	GATC	6 cut(s)	50, 89, 209, 982, 1054, 1336
Sau96I	GGNCC	4 cut(s)	249, 457, 570, 1576
SchI	GAGTC	2 cut(s)	124, 220
ScrFI	CCNGG	6 cut(s)	541, 567, 665, 893, 1189, 1574
SduI	GDGCHC	2 cut(s)	903, 1430
SfaNI	GCATC	2 cut(s)	1163, 1194
SfcI	CTRYAG	2 cut(s)	54, 1470
SinI	GGWCC	3 cut(s)	249, 457, 570
SmiMI	CAYNNNNRTG	1 cut(s)	1446
SmlI	CTYRAG	4 cut(s)	357, 937, 1064, 1694
SmoI	CTYRAG	4 cut(s)	357, 937, 1064, 1694
SsiI	CCGC	4 cut(s)	19, 216, 478, 558
StyD4I	CCNGG	6 cut(s)	539, 565, 663, 891, 1187, 1572
StyI	CCWWGG	1 cut(s)	588
TaaI	ACNGT	4 cut(s)	457, 469, 704, 1105
TaqI	TCGA	3 cut(s)	33, 177, 972
TatI	WGTACW	1 cut(s)	704
TauI	GCSGC	2 cut(s)	480, 561
TfiI	GAWTC	9 cut(s)	35, 179, 254, 400, 1060, 1069, 1226, 1261, 1671
Tru1I	TTAA	6 cut(s)	387, 657, 878, 1010, 1241, 1481
Tru9I	TTAA	6 cut(s)	387, 657, 878, 1010, 1241, 1481
TscAI	CASTG	5 cut(s)	304, 651, 903, 1108, 1597
TseFI	GTSAC	2 cut(s)	1371, 1624
TseI	GCWGC	6 cut(s)	21, 56, 165, 1148, 1151, 1433
Tsp45I	GTSAC	2 cut(s)	1371, 1624
TspDTI	ATGAA	6 cut(s)	122, 137, 284, 647, 904, 1656
TspGWI	ACGGA	3 cut(s)	94, 139, 1436
TspRI	CASTG	5 cut(s)	304, 651, 903, 1108, 1597
VpaK11BI	GGWCC	3 cut(s)	249, 457, 570
XapI	RAATTY	2 cut(s)	141, 1541
XceI	RCATGY	1 cut(s)	1121
XmiI	GTMKAC	2 cut(s)	452, 946
XmnI	GAANNNNTTC	3 cut(s)	145, 338, 1265
Zsp2I	ATGCAT	2 cut(s)	524, 1123

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.