Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0002119

Physical Location & Seq

Genomic Coordinates Forward (+)

75046130 .. 75051161

Gene Structure 5032 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG470900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

ATGCCTTCCATCGCCGACCGCAGCGTCGAACTCGAATCCAACGCCGTCGGATCCGCCGCAGTTTCTACTCCTCCGAAACGGAGGCTGAGATCCAATTCGTCGCCGATGAAGCTGAGTCCGATGAAGTGCAAGCGCGTCGGAATTTCTTCCGTCGCGAAATTACGCAGCGTTGAGGTCGAATCGGAGAGGAGCGTGGAGGAGGTAGTCGGATCCGGCGGTGATTTGACTCCTCAGAAGCGGAAATTGAGGTCCGATTCGTCGTCGCCGATGAAGCCGAGACCGGTCTCCTCGCCGATGAAGTGTAAATCGGCTCGCCGGAACCTCAGTGCTTGCACCAGCACTCCTGCAAATGGAATTGAGAAGTATTTCAGTCAGAAAAAGCCTCAAGCCTTTTGCAAACCACCGGTTGTTGTTAAGCCGAATTGGAATCCCAGAGATAAGGAGCAGATGAGGATAGTGAAGGAGGCATTGCACTTGTCTACGGTCCCCTCTACTGTTGCGTGCCGCGATGTGGAGCAGAATAGGGTTCTGGAGTTCTGCAAGTCATGCATAGAGCAAGAGAAGGCCGGGAGTTTATATGTATGCGGCTGTCCTGGGACCGGAAAGTCCTTGTCCATGGGGAAAGTGAAACAGCTTTTGGTGAATTGGGCAGGAGAGGGTGGATTTCAGGAACCGGATGTGTTGGAATTGAACTGTACATCGCTAACAAAAACTTCTGATATTTTTGCTAAGATACTTGGTAAATACCAACCTCAGAAGAAAGCTAATGGCACTACCTCCCTGCAACTTCTTCAGAAATTATATTCTCAAAAGCCTCAGTCAGATGGGACTAGGATGATGTTGATAATAGCTGATGAGTTGGATTACTTAATCACTAAAGACCGGGCAGTGCTCCATGACCTTTTCATGCTCACAACATACCCATTCTCAAGATGTATACTTTTAGGAGTAGCAAATGCTATCGACTTAGCTGATCGTTTTGTTCCAAAACTTCAGTCATTAAATTGTAAGCCTATGGTTATAACTTTTCGGGCATACTCTAAGGATCAGATTCTCAAGATTCTCCAAGAGAGGCTTATGGCACTACCTTACACTGTTTTTCAACCACATGCATTGGAACTTTGTGCCAGAAAAGTTGCTGCTGCATCTGGAGATATGAGGAAAGCTCTCTGTATTTCCAGGAGTGCAATTGAGATGCTGGAAGCAGAGTTGAGAGAATCTACTGACAAGTTAAACTCATCAACAGCGGAGAATCCATTCTCTGAGCAACAGACAGCTCCAGCTCTTGCTCTGGTGAAAAAACAGGAGATTGATATTGTGAGAATTGATCACATGGCCATTGCTTTGTCAAAGACATTCAAGTCACCAGTAGTGGATACCATACAATGTCTTCCTCAACATCAACAGATTATAATGTGCTCTGCTGCAAAGCATTTCCGTGGTGTGAAGAAAGATACAACTATAGGAGAGTTAAATAAATCTTACTTCGACATCTGCAAAGCAACACTAATTCCCCCAGTTGGAAGTTTTGAATTTTCAAGTATGTGCAAAGTGCTAAATGACCAGGGCCTCCTCAAACTCAGTGGCCAATCCAGGGATATAAAATCCAAGAGAGTGACATTGAATGTAGATGAAGGGGACATCACATTTGCATTGCAGGGAATCCGGTTTTTTCGGACTTGTCTTGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006725 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0022402 GO:0034641 GO:0034645 GO:0042023 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044786 GO:0046483 GO:0071704 GO:0090304 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 map04110 map04111 map04113

Pfam Domains

Protein Families

AAA_22 Cdc6_C

Protein Analysis

563

Amino Acids

62.34

Weight (kDa)

9.35

Isoelectric Point (pI)

49.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_22	PF13401	188 - 305	9.5e-12	AAA domain
Cdc6-ORC-like_ATPase_lid	PF22606	346 - 403	2.1e-11	Cdc6/ORC-like, ATPase lid domain
WHD_Cdc6	PF09079	459 - 551	8.1e-20	CDC6, C terminal winged helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002119)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07270 AT1G07270 AT2G29680 AT2G29680
fragaria_vesca	FvH4_3g38340 FvH4_3g38340 FvH4_3g38340 FvH4_3g38340 FvH4_3g38340
malus_domestica	MD03G1072700.v1.1 MD11G1078800.v1.1
prunus_persica	Prupe.6G059500_v2.0.a1
pyrus_communis	pycom03g05890 pycom11g06590
rosa_chinensis	RchiOBHm_Chr2g0157131 RchiOBHm_Chr4g0399271 RchiOBHm_Chr5g0068951
rosa_laevigata	RLG00000020961 RLG00000036023
rosa_multiflora	Rmu_sc0001960.1_g000002 Rmu_sc0003822.1_g000023 Rmu_sc0010302.1_g000001
rosa_roxburghii	Rroxscaffold_1G00011800 Rroxscaffold_1G00029470 Rroxscaffold_2G00092520
rosa_rugosa	Rorug01G0058900 Rorug01G0059000 Rorug01G0059100 Rorug01G0059200 Rorug05G0394800 Rorug07G0214100 Rorug07G0214200 Rorug07G0214300
rosa_samantha	Rh2BG537600 Rh2DG546400 Rh4AG092800 Rh4CG101200 Rh5BG470900 Rh5CG493400 Rh7BG347600
rosa_wichuraiana	Rw2G031040 Rw2G043260 Rw4G007640 Rw5G042190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1022, 1412
AasI	GACNNNNNNGTC	3 cut(s)	23, 604, 1360
AccI	GTMKAC	2 cut(s)	479, 937
AccII	CGCG	3 cut(s)	135, 155, 507
AciI	CCGC	8 cut(s)	19, 54, 57, 216, 238, 505, 585, 1247
AclWI	GGATC	6 cut(s)	45, 58, 84, 204, 217, 1053
AcoI	YGGCCR	2 cut(s)	1335, 1585
AcsI	RAATTY	2 cut(s)	141, 1532
AcuI	CTGAAG	2 cut(s)	776, 977
AfaI	GTAC	1 cut(s)	697
AfiI	CCNNNNNNNGG	5 cut(s)	350, 511, 599, 1520, 1594
AgeI	ACCGGT	2 cut(s)	280, 403
AgsI	TTSAA	6 cut(s)	691, 1103, 1360, 1532, 1539, 1624
AjnI	CCWGG	4 cut(s)	592, 1178, 1563, 1592
AjuI	GAANNNNNNNTTGG	2 cut(s)	620, 652
AluBI	AGCT	8 cut(s)	112, 634, 764, 851, 971, 1166, 1277, 1283
AluI	AGCT	8 cut(s)	112, 634, 764, 851, 971, 1166, 1277, 1283
Alw21I	GWGCWC	2 cut(s)	894, 1421
Alw26I	GTCTC	2 cut(s)	271, 289
AlwI	GGATC	6 cut(s)	45, 58, 84, 204, 217, 1053
AoxI	GGCC	4 cut(s)	564, 1335, 1567, 1585
ApeKI	GCWGC	5 cut(s)	21, 165, 1139, 1142, 1424
ApoI	RAATTY	2 cut(s)	141, 1532
ArsI	GACNNNNNNTTYG	4 cut(s)	980, 1012, 1631, 1663
AsiGI	ACCGGT	2 cut(s)	280, 403
Asp700I	GAANNNNTTC	3 cut(s)	145, 365, 1256
AspLEI	GCGC	1 cut(s)	135
AspS9I	GGNCC	4 cut(s)	249, 484, 597, 1567
AsuC2I	CCSGG	2 cut(s)	568, 884
AsuHPI	GGTGA	4 cut(s)	230, 652, 1306, 1356
AvaII	GGWCC	3 cut(s)	249, 484, 597
BalI	TGGCCA	2 cut(s)	1337, 1587
BamHI	GGATCC	2 cut(s)	50, 209
BbsI	GAAGAC	1 cut(s)	1382
Bbv12I	GWGCWC	2 cut(s)	894, 1421
BbvI	GCAGC	5 cut(s)	33, 177, 1126, 1129, 1411
BccI	CCATC	2 cut(s)	17, 818
BceAI	ACGGC	1 cut(s)	29
BcgI	CGANNNNNNTGC	2 cut(s)	118, 152
BciT130I	CCWGG	4 cut(s)	594, 1180, 1565, 1594
BciVI	GTATCC	1 cut(s)	1369
BclI	TGATCA	1 cut(s)	1327
BcnI	CCSGG	2 cut(s)	568, 884
BcoDI	GTCTC	2 cut(s)	271, 289
BfaI	CTAG	1 cut(s)	831
BfmI	CTRYAG	1 cut(s)	1461
BfuI	GTATCC	1 cut(s)	1369
BisI	GCNGC	8 cut(s)	22, 57, 166, 505, 586, 1140, 1143, 1425
BlsI	GCNGC	8 cut(s)	23, 58, 167, 506, 587, 1141, 1144, 1426
Bme1390I	CCNGG	6 cut(s)	568, 594, 884, 1180, 1565, 1594
Bme18I	GGWCC	3 cut(s)	249, 484, 597
BmgT120I	GGNCC	4 cut(s)	249, 484, 597, 1567
BmiI	GGNNCC	6 cut(s)	52, 211, 320, 486, 598, 672
BmrFI	CCNGG	6 cut(s)	568, 594, 884, 1180, 1565, 1594
BmrI	ACTGGG	1 cut(s)	1511
BmsI	GCATC	2 cut(s)	1154, 1185
BmuI	ACTGGG	1 cut(s)	1511
BpiI	GAAGAC	1 cut(s)	1382
BplI	GAGNNNNNCTC	2 cut(s)	1150, 1182
BpmI	CTGGAG	3 cut(s)	551, 1170, 1263
BpuEI	CTTGAG	3 cut(s)	369, 913, 1040
BpuMI	CCSGG	2 cut(s)	568, 884
BsaI	GGTCTC	2 cut(s)	271, 289
BsaJI	CCNNGG	5 cut(s)	593, 615, 1438, 1564, 1593
BsaWI	WCCGGW	5 cut(s)	280, 403, 599, 673, 1665
BsaXI	ACNNNNNCTCC	2 cut(s)	325, 355
Bsc4I	CCNNNNNNNGG	5 cut(s)	350, 511, 599, 1520, 1594
Bse118I	RCCGGY	2 cut(s)	280, 403
Bse1I	ACTGG	2 cut(s)	1367, 1517
Bse3DI	GCAATG	3 cut(s)	467, 1338, 1652
BseBI	CCWGG	4 cut(s)	594, 1180, 1565, 1594
BseDI	CCNNGG	5 cut(s)	593, 615, 1438, 1564, 1593
BseGI	GGATG	2 cut(s)	682, 840
BseLI	CCNNNNNNNGG	5 cut(s)	350, 511, 599, 1520, 1594
BseMI	GCAATG	3 cut(s)	467, 1338, 1652
BseMII	CTCAG	8 cut(s)	77, 104, 245, 337, 767, 830, 1254, 1594
BseNI	ACTGG	2 cut(s)	1367, 1517
BseRI	GAGGAG	6 cut(s)	60, 202, 212, 219, 277, 1562
BseXI	GCAGC	5 cut(s)	33, 177, 1126, 1129, 1411
Bsh1236I	CGCG	3 cut(s)	135, 155, 507
Bsh1285I	CGRYCG	1 cut(s)	19
BshFI	GGCC	4 cut(s)	566, 1337, 1569, 1587
BshTI	ACCGGT	2 cut(s)	280, 403
BsiEI	CGRYCG	1 cut(s)	19
BsiHKAI	GWGCWC	2 cut(s)	894, 1421
BsiSI	CCGG	9 cut(s)	213, 281, 316, 404, 567, 600, 674, 883, 1666
BslFI	GGGAC	4 cut(s)	470, 610, 841, 1652
BslI	CCNNNNNNNGG	5 cut(s)	350, 511, 599, 1520, 1594
BsmAI	GTCTC	2 cut(s)	271, 289
BsmFI	GGGAC	4 cut(s)	470, 610, 841, 1652
BsnI	GGCC	4 cut(s)	566, 1337, 1569, 1587
Bso31I	GGTCTC	2 cut(s)	271, 289
Bsp1286I	GDGCHC	2 cut(s)	894, 1421
Bsp1407I	TGTACA	1 cut(s)	695
Bsp143I	GATC	6 cut(s)	50, 89, 209, 973, 1045, 1327
Bsp19I	CCATGG	1 cut(s)	615
Bsp68I	TCGCGA	1 cut(s)	155
BspACI	CCGC	8 cut(s)	19, 54, 57, 216, 238, 505, 585, 1247
BspANI	GGCC	4 cut(s)	566, 1337, 1569, 1587
BspCNI	CTCAG	8 cut(s)	78, 105, 244, 336, 766, 829, 1255, 1593
BspFNI	CGCG	3 cut(s)	135, 155, 507
BspLI	GGNNCC	6 cut(s)	52, 211, 320, 486, 598, 672
BspPI	GGATC	6 cut(s)	45, 58, 84, 204, 217, 1053
BspTNI	GGTCTC	2 cut(s)	271, 289
BsrDI	GCAATG	3 cut(s)	467, 1338, 1652
BsrFI	RCCGGY	2 cut(s)	280, 403
BsrGI	TGTACA	1 cut(s)	695
BsrI	ACTGG	2 cut(s)	1367, 1517
BssAI	RCCGGY	2 cut(s)	280, 403
BssECI	CCNNGG	5 cut(s)	593, 615, 1438, 1564, 1593
BssMI	GATC	6 cut(s)	50, 89, 209, 973, 1045, 1327
BssNAI	GTATAC	1 cut(s)	938
BssT1I	CCWWGG	1 cut(s)	615
Bst1107I	GTATAC	1 cut(s)	938
Bst2UI	CCWGG	4 cut(s)	594, 1180, 1565, 1594
Bst4CI	ACNGT	4 cut(s)	484, 496, 695, 1096
BstAPI	GCANNNNNTGC	1 cut(s)	546
BstAUI	TGTACA	1 cut(s)	695
BstC8I	GCNNGC	4 cut(s)	131, 313, 331, 502
BstDSI	CCRYGG	2 cut(s)	615, 1438
BstF5I	GGATG	2 cut(s)	682, 840
BstFNI	CGCG	3 cut(s)	135, 155, 507
BstHHI	GCGC	1 cut(s)	135
BstKTI	GATC	6 cut(s)	53, 92, 212, 976, 1048, 1330
BstMAI	GTCTC	2 cut(s)	271, 289
BstMBI	GATC	6 cut(s)	50, 89, 209, 973, 1045, 1327
BstMCI	CGRYCG	1 cut(s)	19
BstMWI	GCNNNNNNNGC	3 cut(s)	109, 271, 546
BstNI	CCWGG	4 cut(s)	594, 1180, 1565, 1594
BstNSI	RCATGY	1 cut(s)	1112
BstSCI	CCNGG	6 cut(s)	566, 592, 882, 1178, 1563, 1592
BstSFI	CTRYAG	1 cut(s)	1461
BstUI	CGCG	3 cut(s)	135, 155, 507
BstV1I	GCAGC	5 cut(s)	33, 177, 1126, 1129, 1411
BstV2I	GAAGAC	1 cut(s)	1382
BstX2I	RGATCY	3 cut(s)	50, 89, 209
BstYI	RGATCY	3 cut(s)	50, 89, 209
BstZ17I	GTATAC	1 cut(s)	938
BsuI	GTATCC	1 cut(s)	1369
BsuRI	GGCC	4 cut(s)	566, 1337, 1569, 1587
BtgI	CCRYGG	2 cut(s)	615, 1438
BtgZI	GCGATG	2 cut(s)	522, 684
BtsCI	GGATG	2 cut(s)	682, 840
BtsI	GCAGTG	1 cut(s)	894
BtsIMutI	CAGTG	4 cut(s)	331, 894, 1092, 1588
BtuMI	TCGCGA	1 cut(s)	155
Cac8I	GCNNGC	4 cut(s)	131, 313, 331, 502
CfoI	GCGC	1 cut(s)	135
Cfr10I	RCCGGY	2 cut(s)	280, 403
Cfr13I	GGNCC	4 cut(s)	249, 484, 597, 1567
CseI	GACGC	2 cut(s)	13, 124
Csp6I	GTAC	1 cut(s)	696
CspAI	ACCGGT	2 cut(s)	280, 403
CspCI	CAANNNNNGTGG	4 cut(s)	1095, 1130, 1564, 1599
CviAII	CATG	6 cut(s)	546, 616, 896, 907, 1109, 1333
CviQI	GTAC	1 cut(s)	696
DpnI	GATC	6 cut(s)	52, 91, 211, 975, 1047, 1329
DpnII	GATC	6 cut(s)	50, 89, 209, 973, 1045, 1327
DrdI	GACNNNNNNGTC	3 cut(s)	23, 604, 1360
DseDI	GACNNNNNNGTC	3 cut(s)	23, 604, 1360
EaeI	YGGCCR	2 cut(s)	1335, 1585
EciI	GGCGGA	1 cut(s)	43
Eco130I	CCWWGG	1 cut(s)	615
Eco31I	GGTCTC	2 cut(s)	271, 289
Eco47I	GGWCC	3 cut(s)	249, 484, 597
Eco57I	CTGAAG	2 cut(s)	776, 977
EcoO109I	RGGNCCY	1 cut(s)	1567
EcoRII	CCWGG	4 cut(s)	592, 1178, 1563, 1592
EcoT14I	CCWWGG	1 cut(s)	615
EcoT22I	ATGCAT	2 cut(s)	551, 1114
ErhI	CCWWGG	1 cut(s)	615
FaeI	CATG	6 cut(s)	549, 619, 899, 910, 1112, 1336
FalI	AAGNNNNNCTT	2 cut(s)	1059, 1091
FaqI	GGGAC	4 cut(s)	470, 610, 841, 1652
FatI	CATG	6 cut(s)	545, 615, 895, 906, 1108, 1332
FbaI	TGATCA	1 cut(s)	1327
FblI	GTMKAC	2 cut(s)	479, 937
Fnu4HI	GCNGC	8 cut(s)	22, 57, 166, 505, 586, 1140, 1143, 1425
FokI	GGATG	2 cut(s)	689, 847
Fsp4HI	GCNGC	8 cut(s)	22, 57, 166, 505, 586, 1140, 1143, 1425
FspBI	CTAG	1 cut(s)	831
GlaI	GCGC	1 cut(s)	134
GluI	GCNGC	8 cut(s)	22, 57, 166, 505, 586, 1140, 1143, 1425
GsuI	CTGGAG	3 cut(s)	551, 1170, 1263
HaeIII	GGCC	4 cut(s)	566, 1337, 1569, 1587
HapII	CCGG	9 cut(s)	213, 281, 316, 404, 567, 600, 674, 883, 1666
HgaI	GACGC	2 cut(s)	13, 124
HhaI	GCGC	1 cut(s)	135
Hin1II	CATG	6 cut(s)	549, 619, 899, 910, 1112, 1336
Hin6I	GCGC	1 cut(s)	133
HinP1I	GCGC	1 cut(s)	133
HpaII	CCGG	9 cut(s)	213, 281, 316, 404, 567, 600, 674, 883, 1666
HphI	GGTGA	4 cut(s)	230, 652, 1306, 1356
Hpy166II	GTNNAC	2 cut(s)	480, 938
Hpy188III	TCNNGA	7 cut(s)	154, 530, 668, 930, 1057, 1149, 1685
Hpy8I	GTNNAC	2 cut(s)	480, 938
Hpy99I	CGWCG	7 cut(s)	29, 50, 103, 140, 155, 262, 265
HpyAV	CCTTC	4 cut(s)	15, 454, 556, 1628
HpyCH4III	ACNGT	4 cut(s)	484, 496, 695, 1096
HpyF10VI	GCNNNNNNNGC	3 cut(s)	109, 271, 546
Hsp92II	CATG	6 cut(s)	549, 619, 899, 910, 1112, 1336
HspAI	GCGC	1 cut(s)	133
Ksp22I	TGATCA	1 cut(s)	1327
Kzo9I	GATC	6 cut(s)	50, 89, 209, 973, 1045, 1327
LmnI	GCTCC	5 cut(s)	189, 442, 514, 897, 1282
Lsp1109I	GCAGC	5 cut(s)	33, 177, 1126, 1129, 1411
LweI	GCATC	2 cut(s)	1154, 1185
MaeI	CTAG	1 cut(s)	831
MaeIII	GTNAC	2 cut(s)	1362, 1615
MalI	GATC	6 cut(s)	52, 91, 211, 975, 1047, 1329
MboI	GATC	6 cut(s)	50, 89, 209, 973, 1045, 1327
MboII	GAAGA	5 cut(s)	138, 769, 782, 1382, 1459
MfeI	CAATTG	1 cut(s)	1188
MflI	RGATCY	3 cut(s)	50, 89, 209
MhlI	GDGCHC	2 cut(s)	894, 1421
MlsI	TGGCCA	2 cut(s)	1337, 1587
MluNI	TGGCCA	2 cut(s)	1337, 1587
MlyI	GAGTC	2 cut(s)	124, 220
MmeI	TCCRAC	7 cut(s)	28, 63, 118, 187, 663, 840, 1501
Mox20I	TGGCCA	2 cut(s)	1337, 1587
Mph1103I	ATGCAT	2 cut(s)	551, 1114
MroXI	GAANNNNTTC	3 cut(s)	145, 365, 1256
MscI	TGGCCA	2 cut(s)	1337, 1587
MseI	TTAA	5 cut(s)	414, 869, 1001, 1232, 1472
MslI	CAYNNNNRTG	1 cut(s)	1437
Msp20I	TGGCCA	2 cut(s)	1337, 1587
MspA1I	CMGCKG	1 cut(s)	1247
MspI	CCGG	9 cut(s)	213, 281, 316, 404, 567, 600, 674, 883, 1666
MspR9I	CCNGG	6 cut(s)	568, 594, 884, 1180, 1565, 1594
MunI	CAATTG	1 cut(s)	1188
MvaI	CCWGG	4 cut(s)	594, 1180, 1565, 1594
MvnI	CGCG	3 cut(s)	135, 155, 507
MwoI	GCNNNNNNNGC	3 cut(s)	109, 271, 546
NciI	CCSGG	2 cut(s)	568, 884
NcoI	CCATGG	1 cut(s)	615
NdeII	GATC	6 cut(s)	50, 89, 209, 973, 1045, 1327
NlaIII	CATG	6 cut(s)	549, 619, 899, 910, 1112, 1336
NlaIV	GGNNCC	6 cut(s)	52, 211, 320, 486, 598, 672
NmeAIII	GCCGAG	1 cut(s)	300
NmuCI	GTSAC	2 cut(s)	1362, 1615
NruI	TCGCGA	1 cut(s)	155
NsiI	ATGCAT	2 cut(s)	551, 1114
NspI	RCATGY	1 cut(s)	1112
PcsI	WCGNNNNNNNCGW	1 cut(s)	263
PdmI	GAANNNNTTC	3 cut(s)	145, 365, 1256
PfeI	GAWTC	9 cut(s)	35, 179, 254, 427, 1051, 1060, 1217, 1252, 1662
PfoI	TCCNGGA	1 cut(s)	1178
PinAI	ACCGGT	2 cut(s)	280, 403
PkrI	GCNGC	8 cut(s)	23, 58, 167, 506, 587, 1141, 1144, 1426
PleI	GAGTC	2 cut(s)	123, 220
PpsI	GAGTC	2 cut(s)	123, 220
PsiI	TTATAA	2 cut(s)	1022, 1412
Psp6I	CCWGG	4 cut(s)	592, 1178, 1563, 1592
PspGI	CCWGG	4 cut(s)	592, 1178, 1563, 1592
PspN4I	GGNNCC	6 cut(s)	52, 211, 320, 486, 598, 672
PspPI	GGNCC	4 cut(s)	249, 484, 597, 1567
PsuI	RGATCY	3 cut(s)	50, 89, 209
RruI	TCGCGA	1 cut(s)	155
RsaI	GTAC	1 cut(s)	697
RsaNI	GTAC	1 cut(s)	696
RseI	CAYNNNNRTG	1 cut(s)	1437
SaqAI	TTAA	5 cut(s)	414, 869, 1001, 1232, 1472
SatI	GCNGC	8 cut(s)	22, 57, 166, 505, 586, 1140, 1143, 1425
Sau3AI	GATC	6 cut(s)	50, 89, 209, 973, 1045, 1327
Sau96I	GGNCC	4 cut(s)	249, 484, 597, 1567
SchI	GAGTC	2 cut(s)	124, 220
ScrFI	CCNGG	6 cut(s)	568, 594, 884, 1180, 1565, 1594
SduI	GDGCHC	2 cut(s)	894, 1421
SfaNI	GCATC	2 cut(s)	1154, 1185
SfcI	CTRYAG	1 cut(s)	1461
SinI	GGWCC	3 cut(s)	249, 484, 597
SmiMI	CAYNNNNRTG	1 cut(s)	1437
SmlI	CTYRAG	4 cut(s)	384, 928, 1055, 1685
SmoI	CTYRAG	4 cut(s)	384, 928, 1055, 1685
SsiI	CCGC	8 cut(s)	19, 54, 57, 216, 238, 505, 585, 1247
SspMI	CTAG	1 cut(s)	831
StyD4I	CCNGG	6 cut(s)	566, 592, 882, 1178, 1563, 1592
StyI	CCWWGG	1 cut(s)	615
TaaI	ACNGT	4 cut(s)	484, 496, 695, 1096
TaqI	TCGA	5 cut(s)	27, 33, 177, 963, 1488
TatI	WGTACW	1 cut(s)	695
TauI	GCSGC	3 cut(s)	59, 507, 588
TfiI	GAWTC	9 cut(s)	35, 179, 254, 427, 1051, 1060, 1217, 1252, 1662
Tru1I	TTAA	5 cut(s)	414, 869, 1001, 1232, 1472
Tru9I	TTAA	5 cut(s)	414, 869, 1001, 1232, 1472
TscAI	CASTG	4 cut(s)	331, 894, 1099, 1588
TseFI	GTSAC	2 cut(s)	1362, 1615
TseI	GCWGC	5 cut(s)	21, 165, 1139, 1142, 1424
Tsp45I	GTSAC	2 cut(s)	1362, 1615
TspDTI	ATGAA	6 cut(s)	122, 137, 284, 311, 895, 1647
TspGWI	ACGGA	3 cut(s)	94, 139, 1427
TspRI	CASTG	4 cut(s)	331, 894, 1099, 1588
VpaK11BI	GGWCC	3 cut(s)	249, 484, 597
XapI	RAATTY	2 cut(s)	141, 1532
XceI	RCATGY	1 cut(s)	1112
XmiI	GTMKAC	2 cut(s)	479, 937
XmnI	GAANNNNTTC	3 cut(s)	145, 365, 1256
XspI	CTAG	1 cut(s)	831
Zsp2I	ATGCAT	2 cut(s)	551, 1114

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.