Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0002119

Physical Location & Seq

Genomic Coordinates Forward (+)

38054939 .. 38060015

Gene Structure 5077 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00029470.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1581 bp

ATGAGATCCAATTCGTCGCCGATGAAGCTGAGTCCGATGAAATGCAAGCGCGTTGGAATTTCTTCCGTCGCGAAATTACGCAACGTTGAGGTCGAATCGGAGAGGAGCGTGGAGGAGGTAGTCGGATCCGGCGGTGATTTGACTCCTCAGAAGCGGAAGTTGAGGTCCGATTCGTCGTCGCCGATGAAGTGTAAATCGGCTCGCCGGAACCTCAGTGCTTGCACCAGCACTCCTGCAAATGGAATTGAGAAGTATTTCAGTCAGAAAAAGCCTCAAGCCTTTTGCAAACCACCGATTGTTGCTAAGCCGAATTGGAATCCCAGAGATAAGGAGCAGATGAGGATAGTGAAGGAGGCATTGCACTTGTCAACGGTCCCCTCTACTGTTGCGTGCCGCGATGTGGAGCAGAAGAGGGTTCTGGAGTTCTGCAAGTCATGCATAGAGCAAGAGAAGGCCGGGAGTTTATATGTATGCGGGTGTCCTGGGACCGGAAAGTCCTTGTCCATGGAGAAAGTGAAACAGCTTTTGGTGAATTGGGCAGGAGAGGGTGGATTTCAGGAACCGGATGTGTTGGAATTGAACTGTACATCGCTAACAAAAACTTCTGATATTTTTGCTAAGATACTTGGTAAATACCAACCTCAAAAGAAAGCTAATGGCACTACCTCCCTGCAACTTCTTCAGAAATTATATTCTCAAAAGCCTCAGTCAGATGGGACTAAGATGATGTTGATAATAGCTGATGAGTTGGATTACTTAATCACTAAAGACCGGGCAGTGCTCCATGACCTTTTCATGCTCACAACATACCCATTCTCAAGATGTATACTTTTAGGAGTAGCAAATGCAATCGACTTAGCTGATCGTTTTGTTCCAAAACTTCAGTCATTAAATTGTAAGCCTATGGTTATAACTTTTCGGGCATACTCTAAGGATCAGATTCTCAAGATTCTCCAAGAGAGGCTTATGGCACTACCTTACACTGTTTTTCAACCACATGCATTGGAACTTTGTGCCAGAAAAGTTGCTGCTGCATCTGGAGATATGAGGAAAGCTCTCTGTATTTCCAGGAGTGCAATTGAGATGCTGGAAGCAGAGTTGAGAGAATCTACTGACAAGTTAAATTCATCAACAGCAGAGAATCCATTCTCTGAGCAACAGACAGCTCCAGCTCTTGCTCTGGTGAAAAAACAGGAGATTGATATTGTGAGAATTGATCACATGGCCATTGCTTTGTCAAAGACATTCAAGTCACCAGTAGTGGATACCATACAATGTCTTCCTCAACATCAACAGATTATAATGTGCTCTGCTGCAAAGCATTTCCGTGGTGTGAAGAAAGATACAACTATAGGAGAGTTAAACAAATCTTACATAGACATCTGCAAAGCAACACTAATTCCCCCGGTTGGGAGTTTTGAATTTTCAAGTATGTGCAAAGTGCTAAATGACCAGGGCCTCCTCAAACTCAGTGGCCAATCCAGAGATATAAAATCCAAGAGAGTGACATTGAATGTAGATGAAGGGGACATCACATTTGCATTGCAGGGAATCCGGTTTTTTCGGACTTGTCTTGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006725 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0022402 GO:0034641 GO:0034645 GO:0042023 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044786 GO:0046483 GO:0071704 GO:0090304 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 map04110 map04111 map04113

Pfam Domains

Protein Families

AAA_22 Cdc6_C

Protein Analysis

526

Amino Acids

58.5

Weight (kDa)

9.25

Isoelectric Point (pI)

46.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_22	PF13401	151 - 268	1.3e-12	AAA domain
Cdc6-ORC-like_ATPase_lid	PF22606	309 - 366	1.9e-11	Cdc6/ORC-like, ATPase lid domain
WHD_Cdc6	PF09079	422 - 514	4.2e-20	CDC6, C terminal winged helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002119)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07270 AT1G07270 AT2G29680 AT2G29680
fragaria_vesca	FvH4_3g38340 FvH4_3g38340 FvH4_3g38340 FvH4_3g38340 FvH4_3g38340
malus_domestica	MD03G1072700.v1.1 MD11G1078800.v1.1
prunus_persica	Prupe.6G059500_v2.0.a1
pyrus_communis	pycom03g05890 pycom11g06590
rosa_chinensis	RchiOBHm_Chr2g0157131 RchiOBHm_Chr4g0399271 RchiOBHm_Chr5g0068951
rosa_laevigata	RLG00000020961 RLG00000036023
rosa_multiflora	Rmu_sc0001960.1_g000002 Rmu_sc0003822.1_g000023 Rmu_sc0010302.1_g000001
rosa_roxburghii	Rroxscaffold_1G00011800 Rroxscaffold_1G00029470 Rroxscaffold_2G00092520
rosa_rugosa	Rorug01G0058900 Rorug01G0059000 Rorug01G0059100 Rorug01G0059200 Rorug05G0394800 Rorug07G0214100 Rorug07G0214200 Rorug07G0214300
rosa_samantha	Rh2BG537600 Rh2DG546400 Rh4AG092800 Rh4CG101200 Rh5BG470900 Rh5CG493400 Rh7BG347600
rosa_wichuraiana	Rw2G031040 Rw2G043260 Rw4G007640 Rw5G042190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	911, 1301
AasI	GACNNNNNNGTC	2 cut(s)	493, 1249
AccI	GTMKAC	1 cut(s)	826
AccII	CGCG	3 cut(s)	51, 71, 396
AciI	CCGC	4 cut(s)	132, 154, 394, 474
AclI	AACGTT	1 cut(s)	84
AclWI	GGATC	3 cut(s)	120, 133, 942
AcoI	YGGCCR	2 cut(s)	1224, 1474
AcsI	RAATTY	3 cut(s)	57, 1123, 1421
AcuI	CTGAAG	2 cut(s)	665, 866
AfaI	GTAC	1 cut(s)	586
AfiI	CCNNNNNNNGG	5 cut(s)	239, 400, 488, 1409, 1410
AgsI	TTSAA	6 cut(s)	580, 992, 1249, 1421, 1428, 1513
AjnI	CCWGG	3 cut(s)	481, 1067, 1452
AjuI	GAANNNNNNNTTGG	2 cut(s)	509, 541
AluBI	AGCT	8 cut(s)	28, 523, 653, 740, 860, 1055, 1166, 1172
AluI	AGCT	8 cut(s)	28, 523, 653, 740, 860, 1055, 1166, 1172
Alw21I	GWGCWC	2 cut(s)	783, 1310
AlwI	GGATC	3 cut(s)	120, 133, 942
AoxI	GGCC	4 cut(s)	453, 1224, 1456, 1474
ApeKI	GCWGC	3 cut(s)	1028, 1031, 1313
ApoI	RAATTY	3 cut(s)	57, 1123, 1421
ArsI	GACNNNNNNTTYG	4 cut(s)	869, 901, 1520, 1552
Asp700I	GAANNNNTTC	3 cut(s)	61, 254, 1145
AspLEI	GCGC	1 cut(s)	51
AspS9I	GGNCC	4 cut(s)	165, 373, 486, 1456
AsuC2I	CCSGG	3 cut(s)	457, 773, 1406
AsuHPI	GGTGA	4 cut(s)	146, 541, 1195, 1245
AvaII	GGWCC	3 cut(s)	165, 373, 486
BalI	TGGCCA	2 cut(s)	1226, 1476
BamHI	GGATCC	1 cut(s)	125
BbsI	GAAGAC	1 cut(s)	1271
Bbv12I	GWGCWC	2 cut(s)	783, 1310
BbvI	GCAGC	3 cut(s)	1015, 1018, 1300
BccI	CCATC	1 cut(s)	707
BciT130I	CCWGG	3 cut(s)	483, 1069, 1454
BciVI	GTATCC	1 cut(s)	1258
BclI	TGATCA	1 cut(s)	1216
BcnI	CCSGG	3 cut(s)	457, 773, 1406
BfmI	CTRYAG	1 cut(s)	1350
BfuI	GTATCC	1 cut(s)	1258
BisI	GCNGC	4 cut(s)	394, 1029, 1032, 1314
BlpI	GCTNAGC	1 cut(s)	303
BlsI	GCNGC	4 cut(s)	395, 1030, 1033, 1315
Bme1390I	CCNGG	6 cut(s)	457, 483, 773, 1069, 1406, 1454
Bme18I	GGWCC	3 cut(s)	165, 373, 486
BmgT120I	GGNCC	4 cut(s)	165, 373, 486, 1456
BmiI	GGNNCC	5 cut(s)	127, 209, 375, 487, 561
BmrFI	CCNGG	6 cut(s)	457, 483, 773, 1069, 1406, 1454
BmsI	GCATC	2 cut(s)	1043, 1074
BpiI	GAAGAC	1 cut(s)	1271
BplI	GAGNNNNNCTC	2 cut(s)	1039, 1071
BpmI	CTGGAG	3 cut(s)	440, 1059, 1152
Bpu1102I	GCTNAGC	1 cut(s)	303
BpuEI	CTTGAG	3 cut(s)	258, 802, 929
BpuMI	CCSGG	3 cut(s)	457, 773, 1406
BsaJI	CCNNGG	5 cut(s)	482, 504, 1327, 1404, 1453
BsaWI	WCCGGW	3 cut(s)	488, 562, 1554
BsaXI	ACNNNNNCTCC	2 cut(s)	214, 244
Bsc4I	CCNNNNNNNGG	5 cut(s)	239, 400, 488, 1409, 1410
Bse1I	ACTGG	1 cut(s)	1256
Bse3DI	GCAATG	3 cut(s)	356, 1227, 1541
BseBI	CCWGG	3 cut(s)	483, 1069, 1454
BseDI	CCNNGG	5 cut(s)	482, 504, 1327, 1404, 1453
BseGI	GGATG	1 cut(s)	571
BseLI	CCNNNNNNNGG	5 cut(s)	239, 400, 488, 1409, 1410
BseMI	GCAATG	3 cut(s)	356, 1227, 1541
BseMII	CTCAG	6 cut(s)	20, 161, 226, 719, 1143, 1483
BseNI	ACTGG	1 cut(s)	1256
BseRI	GAGGAG	4 cut(s)	118, 128, 135, 1451
BseXI	GCAGC	3 cut(s)	1015, 1018, 1300
Bsh1236I	CGCG	3 cut(s)	51, 71, 396
BshFI	GGCC	4 cut(s)	455, 1226, 1458, 1476
BsiHKAI	GWGCWC	2 cut(s)	783, 1310
BsiSI	CCGG	8 cut(s)	129, 205, 456, 489, 563, 772, 1406, 1555
BslFI	GGGAC	4 cut(s)	359, 499, 730, 1541
BslI	CCNNNNNNNGG	5 cut(s)	239, 400, 488, 1409, 1410
BsmFI	GGGAC	4 cut(s)	359, 499, 730, 1541
BsnI	GGCC	4 cut(s)	455, 1226, 1458, 1476
Bsp1286I	GDGCHC	2 cut(s)	783, 1310
Bsp1407I	TGTACA	1 cut(s)	584
Bsp143I	GATC	5 cut(s)	5, 125, 862, 934, 1216
Bsp1720I	GCTNAGC	1 cut(s)	303
Bsp19I	CCATGG	1 cut(s)	504
Bsp68I	TCGCGA	1 cut(s)	71
BspACI	CCGC	4 cut(s)	132, 154, 394, 474
BspANI	GGCC	4 cut(s)	455, 1226, 1458, 1476
BspCNI	CTCAG	6 cut(s)	21, 160, 225, 718, 1144, 1482
BspFNI	CGCG	3 cut(s)	51, 71, 396
BspLI	GGNNCC	5 cut(s)	127, 209, 375, 487, 561
BspPI	GGATC	3 cut(s)	120, 133, 942
BsrDI	GCAATG	3 cut(s)	356, 1227, 1541
BsrGI	TGTACA	1 cut(s)	584
BsrI	ACTGG	1 cut(s)	1256
BssECI	CCNNGG	5 cut(s)	482, 504, 1327, 1404, 1453
BssMI	GATC	5 cut(s)	5, 125, 862, 934, 1216
BssNAI	GTATAC	1 cut(s)	827
BssT1I	CCWWGG	1 cut(s)	504
Bst1107I	GTATAC	1 cut(s)	827
Bst2UI	CCWGG	3 cut(s)	483, 1069, 1454
Bst4CI	ACNGT	4 cut(s)	373, 385, 584, 985
Bst6I	CTCTTC	1 cut(s)	404
BstAPI	GCANNNNNTGC	1 cut(s)	435
BstAUI	TGTACA	1 cut(s)	584
BstC8I	GCNNGC	4 cut(s)	47, 202, 220, 391
BstDSI	CCRYGG	2 cut(s)	504, 1327
BstF5I	GGATG	1 cut(s)	571
BstFNI	CGCG	3 cut(s)	51, 71, 396
BstHHI	GCGC	1 cut(s)	51
BstKTI	GATC	5 cut(s)	8, 128, 865, 937, 1219
BstMBI	GATC	5 cut(s)	5, 125, 862, 934, 1216
BstMWI	GCNNNNNNNGC	2 cut(s)	25, 435
BstNI	CCWGG	3 cut(s)	483, 1069, 1454
BstNSI	RCATGY	1 cut(s)	1001
BstSCI	CCNGG	6 cut(s)	455, 481, 771, 1067, 1404, 1452
BstSFI	CTRYAG	1 cut(s)	1350
BstUI	CGCG	3 cut(s)	51, 71, 396
BstV1I	GCAGC	3 cut(s)	1015, 1018, 1300
BstV2I	GAAGAC	1 cut(s)	1271
BstX2I	RGATCY	2 cut(s)	5, 125
BstYI	RGATCY	2 cut(s)	5, 125
BstZ17I	GTATAC	1 cut(s)	827
BsuI	GTATCC	1 cut(s)	1258
BsuRI	GGCC	4 cut(s)	455, 1226, 1458, 1476
BtgI	CCRYGG	2 cut(s)	504, 1327
BtgZI	GCGATG	2 cut(s)	411, 573
BtsCI	GGATG	1 cut(s)	571
BtsI	GCAGTG	1 cut(s)	783
BtsIMutI	CAGTG	4 cut(s)	220, 783, 981, 1477
BtuMI	TCGCGA	1 cut(s)	71
Cac8I	GCNNGC	4 cut(s)	47, 202, 220, 391
CfoI	GCGC	1 cut(s)	51
Cfr13I	GGNCC	4 cut(s)	165, 373, 486, 1456
Csp6I	GTAC	1 cut(s)	585
CspCI	CAANNNNNGTGG	4 cut(s)	984, 1019, 1453, 1488
CviAII	CATG	6 cut(s)	435, 505, 785, 796, 998, 1222
CviQI	GTAC	1 cut(s)	585
DpnI	GATC	5 cut(s)	7, 127, 864, 936, 1218
DpnII	GATC	5 cut(s)	5, 125, 862, 934, 1216
DrdI	GACNNNNNNGTC	2 cut(s)	493, 1249
DseDI	GACNNNNNNGTC	2 cut(s)	493, 1249
EaeI	YGGCCR	2 cut(s)	1224, 1474
Eam1104I	CTCTTC	1 cut(s)	404
EarI	CTCTTC	1 cut(s)	404
Eco130I	CCWWGG	1 cut(s)	504
Eco47I	GGWCC	3 cut(s)	165, 373, 486
Eco57I	CTGAAG	2 cut(s)	665, 866
EcoO109I	RGGNCCY	1 cut(s)	1456
EcoRII	CCWGG	3 cut(s)	481, 1067, 1452
EcoT14I	CCWWGG	1 cut(s)	504
EcoT22I	ATGCAT	2 cut(s)	440, 1003
ErhI	CCWWGG	1 cut(s)	504
FaeI	CATG	6 cut(s)	438, 508, 788, 799, 1001, 1225
FalI	AAGNNNNNCTT	2 cut(s)	948, 980
FaqI	GGGAC	4 cut(s)	359, 499, 730, 1541
FatI	CATG	6 cut(s)	434, 504, 784, 795, 997, 1221
FauI	CCCGC	1 cut(s)	467
FbaI	TGATCA	1 cut(s)	1216
FblI	GTMKAC	1 cut(s)	826
Fnu4HI	GCNGC	4 cut(s)	394, 1029, 1032, 1314
FokI	GGATG	1 cut(s)	578
Fsp4HI	GCNGC	4 cut(s)	394, 1029, 1032, 1314
GlaI	GCGC	1 cut(s)	50
GluI	GCNGC	4 cut(s)	394, 1029, 1032, 1314
GsuI	CTGGAG	3 cut(s)	440, 1059, 1152
HaeIII	GGCC	4 cut(s)	455, 1226, 1458, 1476
HapII	CCGG	8 cut(s)	129, 205, 456, 489, 563, 772, 1406, 1555
HhaI	GCGC	1 cut(s)	51
Hin1II	CATG	6 cut(s)	438, 508, 788, 799, 1001, 1225
Hin6I	GCGC	1 cut(s)	49
HinP1I	GCGC	1 cut(s)	49
HincII	GTYRAC	1 cut(s)	369
HindII	GTYRAC	1 cut(s)	369
HpaII	CCGG	8 cut(s)	129, 205, 456, 489, 563, 772, 1406, 1555
HphI	GGTGA	4 cut(s)	146, 541, 1195, 1245
Hpy166II	GTNNAC	2 cut(s)	369, 827
Hpy188III	TCNNGA	8 cut(s)	70, 419, 557, 819, 946, 1038, 1482, 1574
Hpy8I	GTNNAC	2 cut(s)	369, 827
Hpy99I	CGWCG	4 cut(s)	19, 71, 178, 181
HpyAV	CCTTC	3 cut(s)	343, 445, 1517
HpyCH4III	ACNGT	4 cut(s)	373, 385, 584, 985
HpyCH4IV	ACGT	1 cut(s)	84
HpyF10VI	GCNNNNNNNGC	2 cut(s)	25, 435
HpySE526I	ACGT	1 cut(s)	84
Hsp92II	CATG	6 cut(s)	438, 508, 788, 799, 1001, 1225
HspAI	GCGC	1 cut(s)	49
Ksp22I	TGATCA	1 cut(s)	1216
Kzo9I	GATC	5 cut(s)	5, 125, 862, 934, 1216
LmnI	GCTCC	5 cut(s)	105, 331, 403, 786, 1171
Lsp1109I	GCAGC	3 cut(s)	1015, 1018, 1300
LweI	GCATC	2 cut(s)	1043, 1074
MaeII	ACGT	1 cut(s)	84
MaeIII	GTNAC	2 cut(s)	1251, 1504
MalI	GATC	5 cut(s)	7, 127, 864, 936, 1218
MboI	GATC	5 cut(s)	5, 125, 862, 934, 1216
MboII	GAAGA	5 cut(s)	54, 421, 671, 1271, 1348
MfeI	CAATTG	1 cut(s)	1077
MflI	RGATCY	2 cut(s)	5, 125
MhlI	GDGCHC	2 cut(s)	783, 1310
MlsI	TGGCCA	2 cut(s)	1226, 1476
MluNI	TGGCCA	2 cut(s)	1226, 1476
MlyI	GAGTC	2 cut(s)	40, 136
MmeI	TCCRAC	4 cut(s)	34, 103, 552, 729
Mox20I	TGGCCA	2 cut(s)	1226, 1476
Mph1103I	ATGCAT	2 cut(s)	440, 1003
MroXI	GAANNNNTTC	3 cut(s)	61, 254, 1145
MscI	TGGCCA	2 cut(s)	1226, 1476
MseI	TTAA	4 cut(s)	758, 890, 1121, 1361
MslI	CAYNNNNRTG	1 cut(s)	1326
Msp20I	TGGCCA	2 cut(s)	1226, 1476
MspI	CCGG	8 cut(s)	129, 205, 456, 489, 563, 772, 1406, 1555
MspR9I	CCNGG	6 cut(s)	457, 483, 773, 1069, 1406, 1454
MunI	CAATTG	1 cut(s)	1077
MvaI	CCWGG	3 cut(s)	483, 1069, 1454
MvnI	CGCG	3 cut(s)	51, 71, 396
MwoI	GCNNNNNNNGC	2 cut(s)	25, 435
NciI	CCSGG	3 cut(s)	457, 773, 1406
NcoI	CCATGG	1 cut(s)	504
NdeII	GATC	5 cut(s)	5, 125, 862, 934, 1216
NlaIII	CATG	6 cut(s)	438, 508, 788, 799, 1001, 1225
NlaIV	GGNNCC	5 cut(s)	127, 209, 375, 487, 561
NmuCI	GTSAC	2 cut(s)	1251, 1504
NruI	TCGCGA	1 cut(s)	71
NsiI	ATGCAT	2 cut(s)	440, 1003
NspI	RCATGY	1 cut(s)	1001
PcsI	WCGNNNNNNNCGW	2 cut(s)	90, 179
PdmI	GAANNNNTTC	3 cut(s)	61, 254, 1145
PfeI	GAWTC	8 cut(s)	95, 170, 316, 940, 949, 1106, 1141, 1551
PfoI	TCCNGGA	1 cut(s)	1067
PkrI	GCNGC	4 cut(s)	395, 1030, 1033, 1315
PleI	GAGTC	2 cut(s)	39, 136
PpsI	GAGTC	2 cut(s)	39, 136
PsiI	TTATAA	2 cut(s)	911, 1301
Psp1406I	AACGTT	1 cut(s)	84
Psp6I	CCWGG	3 cut(s)	481, 1067, 1452
PspGI	CCWGG	3 cut(s)	481, 1067, 1452
PspN4I	GGNNCC	5 cut(s)	127, 209, 375, 487, 561
PspPI	GGNCC	4 cut(s)	165, 373, 486, 1456
PsuI	RGATCY	2 cut(s)	5, 125
RruI	TCGCGA	1 cut(s)	71
RsaI	GTAC	1 cut(s)	586
RsaNI	GTAC	1 cut(s)	585
RseI	CAYNNNNRTG	1 cut(s)	1326
SaqAI	TTAA	4 cut(s)	758, 890, 1121, 1361
SatI	GCNGC	4 cut(s)	394, 1029, 1032, 1314
Sau3AI	GATC	5 cut(s)	5, 125, 862, 934, 1216
Sau96I	GGNCC	4 cut(s)	165, 373, 486, 1456
SchI	GAGTC	2 cut(s)	40, 136
ScrFI	CCNGG	6 cut(s)	457, 483, 773, 1069, 1406, 1454
SduI	GDGCHC	2 cut(s)	783, 1310
SfaNI	GCATC	2 cut(s)	1043, 1074
SfcI	CTRYAG	1 cut(s)	1350
SinI	GGWCC	3 cut(s)	165, 373, 486
SmiMI	CAYNNNNRTG	1 cut(s)	1326
SmlI	CTYRAG	4 cut(s)	273, 817, 944, 1574
SmoI	CTYRAG	4 cut(s)	273, 817, 944, 1574
SsiI	CCGC	4 cut(s)	132, 154, 394, 474
StyD4I	CCNGG	6 cut(s)	455, 481, 771, 1067, 1404, 1452
StyI	CCWWGG	1 cut(s)	504
TaaI	ACNGT	4 cut(s)	373, 385, 584, 985
TaiI	ACGT	1 cut(s)	87
TaqI	TCGA	2 cut(s)	93, 852
TatI	WGTACW	1 cut(s)	584
TauI	GCSGC	1 cut(s)	396
TfiI	GAWTC	8 cut(s)	95, 170, 316, 940, 949, 1106, 1141, 1551
Tru1I	TTAA	4 cut(s)	758, 890, 1121, 1361
Tru9I	TTAA	4 cut(s)	758, 890, 1121, 1361
TscAI	CASTG	4 cut(s)	220, 783, 988, 1477
TseFI	GTSAC	2 cut(s)	1251, 1504
TseI	GCWGC	3 cut(s)	1028, 1031, 1313
Tsp45I	GTSAC	2 cut(s)	1251, 1504
TspDTI	ATGAA	6 cut(s)	38, 53, 200, 784, 1116, 1536
TspGWI	ACGGA	2 cut(s)	55, 1316
TspRI	CASTG	4 cut(s)	220, 783, 988, 1477
VpaK11BI	GGWCC	3 cut(s)	165, 373, 486
XapI	RAATTY	3 cut(s)	57, 1123, 1421
XceI	RCATGY	1 cut(s)	1001
XmiI	GTMKAC	1 cut(s)	826
XmnI	GAANNNNTTC	3 cut(s)	61, 254, 1145
Zsp2I	ATGCAT	2 cut(s)	440, 1003

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.