Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0002119

Physical Location & Seq

Genomic Coordinates Forward (+)

75063347 .. 75067563

Gene Structure 4217 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000036023

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

ATGCCTTCCATCGCCGACCGCAGCGTCGAACTCGAATCCAACGCCGTCGGATCCGCAGGAGTTTCTACTCCTCCGAAACGGAGGCTGAGATCCAATTCGTCGCCGATGAAGCTGAGTCCGATGAAATGCAAGCGCGTCGGAATTTCTTCCGTCGCGAAATTACGCAGCGATGAGGTGGAATCGGAGAGGAGCGTGGAGGAGGTAGTCGGATCCGGCGGTGATTTGACTCCTCAGAAGCGGAAGTTGAGGTCAGATTCGTCGTCGCCGATGAAGCCGAGACCGGTCTCGTCGCCGATGAAGTGTAAATCGGCTCACCGGAACCTCAGTGCTTGCACCAGCACTCCTGCAAATGGAATTGAGAAGTATTTCAGTCAGAAAAAGCCTCAAGCCTTTGGCAAACCACCGGTTGTTGCTAAGCCGAATTGGAATCCCAGAGATAAGGAGCAGATGAGGATAGTGAAGGAGGCACTGCACTTGTCAACGGTCCCCTCTACTGTTGCGTGCCGCGATGTGGAGCAGAAGAGGGTTCTGGAGTTCTGCAAGTCATGCATAGAGCAAGAGAAGGCCGGGAGTTTATATGTATGTGGGTGTCCTGGGACCGGAAAGTCCTTGTCCATGGAGAAAGTGAAACAGCTTTTGGTGAATTGGGTAGGAGAGGGTGGATTTCAGGAACCGGATGTGTTGGAATTGAATTGTACATCGCTAACAAAAACTTCTGATATATTCACTGAGATACTTGGTAAATACCAACCTCAAAAGAAAGCTAATGGCACTACCTCCCTGCAACTTCTTCAGAAATTATATTCTCAAAAGCCTCAGTCAGATGGGACTAAGATGATGTTGATAATAGCTGATGAGTTGGATTACTTAATCACTAAAGATCGGGCAGTGCTCCATGACCTTTTCATGCTCACAACGTACCCATTCTCAAGATGTATACTTTTAGGAGTAGCAAATGCAATTGACTTAGCTGATCGTTTTGTTCCAAAACTTCAGTCATTAAATTGTAAGCCTATGGTTATAACTTTTCGGGCATATTCTAAGGATCAGATTCTCAAGATTCTCCAAGAGAGGCTTATGGCACTACCTTACACTGTTTTTCAACCACATGCATTGGAACTTTGTGCCAGAAAAGTTGCTGCTGCATCTGGAGATATGAGGAAAGCTCTCTGTATTTCTAGGAGTGCAATTGAGATGCTGGAAGCAGAGTTGAGAGAATCTACTGACAAGTTAAATTCATCAATGGCAGAGAATCCATTCTCTGAGCAACAGGCAGCTCCAGCTCTTGCTCTGGTGAAAAAACAGGAGATTGATATTGTCAGAATTGATCACATGGCCATTGCTTTGTCAAAGACATTCAAGTCACCAGTAGTGGATACCATACAATGTCTTCCTCAACATCAACAGATTATAATGTGCTCTGCTGCAAAGCATTTCCGTGGTGTGAAGAAAGATACAACTATAGGAGAGTTAAATAAATCATACTTAGACATCTGCAAAGCAACACTAATTCCCCCAGTTGGAAGTTTTGAATTTTCGAGTATGTGCAAAGTGCTAAATGACCAGGGCCTCCTCAAACTCAGTGGCCAATCCAGAGATATAAAATCCAAGAGAGTGACATTGAATGTAGATGAAGGGGACATCACATTTGCACTGCAGGGAATCCGGTTTTTTCGGACTTGTCTTGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006725 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0022402 GO:0034641 GO:0034645 GO:0042023 GO:0043170 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044786 GO:0046483 GO:0071704 GO:0090304 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 map04110 map04111 map04113

Pfam Domains

Protein Families

AAA_22 Cdc6_C

Protein Analysis

564

Amino Acids

62.33

Weight (kDa)

9.23

Isoelectric Point (pI)

50.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA_22	PF13401	188 - 305	1.3e-12	AAA domain
Cdc6-ORC-like_ATPase_lid	PF22606	346 - 403	2.1e-11	Cdc6/ORC-like, ATPase lid domain
WHD_Cdc6	PF09079	459 - 551	4.1e-20	CDC6, C terminal winged helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002119)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07270 AT1G07270 AT2G29680 AT2G29680
fragaria_vesca	FvH4_3g38340 FvH4_3g38340 FvH4_3g38340 FvH4_3g38340 FvH4_3g38340
malus_domestica	MD03G1072700.v1.1 MD11G1078800.v1.1
prunus_persica	Prupe.6G059500_v2.0.a1
pyrus_communis	pycom03g05890 pycom11g06590
rosa_chinensis	RchiOBHm_Chr2g0157131 RchiOBHm_Chr4g0399271 RchiOBHm_Chr5g0068951
rosa_laevigata	RLG00000020961 RLG00000036023
rosa_multiflora	Rmu_sc0001960.1_g000002 Rmu_sc0003822.1_g000023 Rmu_sc0010302.1_g000001
rosa_roxburghii	Rroxscaffold_1G00011800 Rroxscaffold_1G00029470 Rroxscaffold_2G00092520
rosa_rugosa	Rorug01G0058900 Rorug01G0059000 Rorug01G0059100 Rorug01G0059200 Rorug05G0394800 Rorug07G0214100 Rorug07G0214200 Rorug07G0214300
rosa_samantha	Rh2BG537600 Rh2DG546400 Rh4AG092800 Rh4CG101200 Rh5BG470900 Rh5CG493400 Rh7BG347600
rosa_wichuraiana	Rw2G031040 Rw2G043260 Rw4G007640 Rw5G042190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1022, 1412
AasI	GACNNNNNNGTC	3 cut(s)	23, 604, 1360
AccI	GTMKAC	1 cut(s)	937
AccII	CGCG	3 cut(s)	135, 155, 507
AciI	CCGC	5 cut(s)	19, 54, 216, 238, 505
AclWI	GGATC	6 cut(s)	45, 58, 84, 204, 217, 1053
AcoI	YGGCCR	2 cut(s)	1335, 1585
AcsI	RAATTY	3 cut(s)	141, 1234, 1532
AcuI	CTGAAG	2 cut(s)	776, 977
AfaI	GTAC	2 cut(s)	697, 920
AfiI	CCNNNNNNNGG	4 cut(s)	350, 511, 599, 1520
AgeI	ACCGGT	2 cut(s)	280, 403
AgsI	TTSAA	5 cut(s)	691, 1103, 1360, 1532, 1624
AjnI	CCWGG	2 cut(s)	592, 1563
AjuI	GAANNNNNNNTTGG	2 cut(s)	620, 652
AluBI	AGCT	8 cut(s)	112, 634, 764, 851, 971, 1166, 1277, 1283
AluI	AGCT	8 cut(s)	112, 634, 764, 851, 971, 1166, 1277, 1283
Alw21I	GWGCWC	2 cut(s)	894, 1421
Alw26I	GTCTC	2 cut(s)	271, 289
AlwI	GGATC	6 cut(s)	45, 58, 84, 204, 217, 1053
AoxI	GGCC	4 cut(s)	564, 1335, 1567, 1585
ApeKI	GCWGC	6 cut(s)	21, 165, 1139, 1142, 1274, 1424
ApoI	RAATTY	3 cut(s)	141, 1234, 1532
ArsI	GACNNNNNNTTYG	4 cut(s)	980, 1012, 1631, 1663
AsiGI	ACCGGT	2 cut(s)	280, 403
Asp700I	GAANNNNTTC	3 cut(s)	145, 365, 1256
AspLEI	GCGC	1 cut(s)	135
AspS9I	GGNCC	3 cut(s)	484, 597, 1567
AsuC2I	CCSGG	1 cut(s)	568
AsuHPI	GGTGA	5 cut(s)	230, 305, 652, 1306, 1356
AvaII	GGWCC	2 cut(s)	484, 597
BalI	TGGCCA	2 cut(s)	1337, 1587
BamHI	GGATCC	2 cut(s)	50, 209
BbsI	GAAGAC	1 cut(s)	1382
Bbv12I	GWGCWC	2 cut(s)	894, 1421
BbvI	GCAGC	6 cut(s)	33, 177, 1126, 1129, 1286, 1411
BccI	CCATC	2 cut(s)	17, 818
BceAI	ACGGC	1 cut(s)	29
BcgI	CGANNNNNNTGC	2 cut(s)	118, 152
BciT130I	CCWGG	2 cut(s)	594, 1565
BciVI	GTATCC	1 cut(s)	1369
BclI	TGATCA	1 cut(s)	1327
BcnI	CCSGG	1 cut(s)	568
BcoDI	GTCTC	2 cut(s)	271, 289
BfaI	CTAG	1 cut(s)	1179
BfmI	CTRYAG	2 cut(s)	1461, 1655
BfuI	GTATCC	1 cut(s)	1369
BisI	GCNGC	7 cut(s)	22, 166, 505, 1140, 1143, 1275, 1425
BlpI	GCTNAGC	1 cut(s)	414
BlsI	GCNGC	7 cut(s)	23, 167, 506, 1141, 1144, 1276, 1426
Bme1390I	CCNGG	3 cut(s)	568, 594, 1565
Bme18I	GGWCC	2 cut(s)	484, 597
BmgT120I	GGNCC	3 cut(s)	484, 597, 1567
BmiI	GGNNCC	6 cut(s)	52, 211, 320, 486, 598, 672
BmrFI	CCNGG	3 cut(s)	568, 594, 1565
BmrI	ACTGGG	1 cut(s)	1511
BmsI	GCATC	2 cut(s)	1154, 1185
BmuI	ACTGGG	1 cut(s)	1511
BpiI	GAAGAC	1 cut(s)	1382
BplI	GAGNNNNNCTC	2 cut(s)	1150, 1182
BpmI	CTGGAG	3 cut(s)	551, 1170, 1263
Bpu1102I	GCTNAGC	1 cut(s)	414
BpuEI	CTTGAG	3 cut(s)	369, 913, 1040
BpuMI	CCSGG	1 cut(s)	568
BsaI	GGTCTC	2 cut(s)	271, 289
BsaJI	CCNNGG	4 cut(s)	593, 615, 1438, 1564
BsaWI	WCCGGW	6 cut(s)	280, 315, 403, 599, 673, 1665
BsaXI	ACNNNNNCTCC	2 cut(s)	325, 355
Bsc4I	CCNNNNNNNGG	4 cut(s)	350, 511, 599, 1520
Bse118I	RCCGGY	2 cut(s)	280, 403
Bse1I	ACTGG	2 cut(s)	1367, 1517
Bse3DI	GCAATG	1 cut(s)	1338
BseBI	CCWGG	2 cut(s)	594, 1565
BseDI	CCNNGG	4 cut(s)	593, 615, 1438, 1564
BseGI	GGATG	1 cut(s)	682
BseLI	CCNNNNNNNGG	4 cut(s)	350, 511, 599, 1520
BseMI	GCAATG	1 cut(s)	1338
BseMII	CTCAG	8 cut(s)	77, 104, 245, 337, 720, 830, 1254, 1594
BseNI	ACTGG	2 cut(s)	1367, 1517
BseRI	GAGGAG	5 cut(s)	60, 202, 212, 219, 1562
BseXI	GCAGC	6 cut(s)	33, 177, 1126, 1129, 1286, 1411
BsgI	GTGCAG	1 cut(s)	455
Bsh1236I	CGCG	3 cut(s)	135, 155, 507
Bsh1285I	CGRYCG	1 cut(s)	19
BshFI	GGCC	4 cut(s)	566, 1337, 1569, 1587
BshTI	ACCGGT	2 cut(s)	280, 403
BsiEI	CGRYCG	1 cut(s)	19
BsiHKAI	GWGCWC	2 cut(s)	894, 1421
BsiSI	CCGG	8 cut(s)	213, 281, 316, 404, 567, 600, 674, 1666
BslFI	GGGAC	4 cut(s)	470, 610, 841, 1652
BslI	CCNNNNNNNGG	4 cut(s)	350, 511, 599, 1520
BsmAI	GTCTC	2 cut(s)	271, 289
BsmFI	GGGAC	4 cut(s)	470, 610, 841, 1652
BsnI	GGCC	4 cut(s)	566, 1337, 1569, 1587
Bso31I	GGTCTC	2 cut(s)	271, 289
Bsp1286I	GDGCHC	2 cut(s)	894, 1421
Bsp1407I	TGTACA	1 cut(s)	695
Bsp143I	GATC	7 cut(s)	50, 89, 209, 880, 973, 1045, 1327
Bsp1720I	GCTNAGC	1 cut(s)	414
Bsp19I	CCATGG	1 cut(s)	615
Bsp68I	TCGCGA	1 cut(s)	155
BspACI	CCGC	5 cut(s)	19, 54, 216, 238, 505
BspANI	GGCC	4 cut(s)	566, 1337, 1569, 1587
BspCNI	CTCAG	8 cut(s)	78, 105, 244, 336, 721, 829, 1255, 1593
BspFNI	CGCG	3 cut(s)	135, 155, 507
BspLI	GGNNCC	6 cut(s)	52, 211, 320, 486, 598, 672
BspMAI	CTGCAG	1 cut(s)	1659
BspPI	GGATC	6 cut(s)	45, 58, 84, 204, 217, 1053
BspTNI	GGTCTC	2 cut(s)	271, 289
BsrDI	GCAATG	1 cut(s)	1338
BsrFI	RCCGGY	2 cut(s)	280, 403
BsrGI	TGTACA	1 cut(s)	695
BsrI	ACTGG	2 cut(s)	1367, 1517
BssAI	RCCGGY	2 cut(s)	280, 403
BssECI	CCNNGG	4 cut(s)	593, 615, 1438, 1564
BssMI	GATC	7 cut(s)	50, 89, 209, 880, 973, 1045, 1327
BssNAI	GTATAC	1 cut(s)	938
BssT1I	CCWWGG	1 cut(s)	615
Bst1107I	GTATAC	1 cut(s)	938
Bst2UI	CCWGG	2 cut(s)	594, 1565
Bst4CI	ACNGT	3 cut(s)	484, 496, 1096
Bst6I	CTCTTC	1 cut(s)	515
BstAPI	GCANNNNNTGC	1 cut(s)	546
BstAUI	TGTACA	1 cut(s)	695
BstC8I	GCNNGC	3 cut(s)	131, 331, 502
BstDSI	CCRYGG	2 cut(s)	615, 1438
BstF5I	GGATG	1 cut(s)	682
BstFNI	CGCG	3 cut(s)	135, 155, 507
BstHHI	GCGC	1 cut(s)	135
BstKTI	GATC	7 cut(s)	53, 92, 212, 883, 976, 1048, 1330
BstMAI	GTCTC	2 cut(s)	271, 289
BstMBI	GATC	7 cut(s)	50, 89, 209, 880, 973, 1045, 1327
BstMCI	CGRYCG	1 cut(s)	19
BstMWI	GCNNNNNNNGC	4 cut(s)	109, 271, 546, 1280
BstNI	CCWGG	2 cut(s)	594, 1565
BstNSI	RCATGY	1 cut(s)	1112
BstSCI	CCNGG	3 cut(s)	566, 592, 1563
BstSFI	CTRYAG	2 cut(s)	1461, 1655
BstUI	CGCG	3 cut(s)	135, 155, 507
BstV1I	GCAGC	6 cut(s)	33, 177, 1126, 1129, 1286, 1411
BstV2I	GAAGAC	1 cut(s)	1382
BstX2I	RGATCY	3 cut(s)	50, 89, 209
BstYI	RGATCY	3 cut(s)	50, 89, 209
BstZ17I	GTATAC	1 cut(s)	938
BsuI	GTATCC	1 cut(s)	1369
BsuRI	GGCC	4 cut(s)	566, 1337, 1569, 1587
BtgI	CCRYGG	2 cut(s)	615, 1438
BtgZI	GCGATG	3 cut(s)	183, 522, 684
BtsCI	GGATG	1 cut(s)	682
BtsI	GCAGTG	3 cut(s)	467, 894, 1652
BtsIMutI	CAGTG	7 cut(s)	331, 467, 726, 894, 1092, 1588, 1652
BtuMI	TCGCGA	1 cut(s)	155
Cac8I	GCNNGC	3 cut(s)	131, 331, 502
CfoI	GCGC	1 cut(s)	135
Cfr10I	RCCGGY	2 cut(s)	280, 403
Cfr13I	GGNCC	3 cut(s)	484, 597, 1567
CseI	GACGC	2 cut(s)	13, 124
Csp6I	GTAC	2 cut(s)	696, 919
CspAI	ACCGGT	2 cut(s)	280, 403
CspCI	CAANNNNNGTGG	4 cut(s)	1095, 1130, 1564, 1599
CviAII	CATG	6 cut(s)	546, 616, 896, 907, 1109, 1333
CviQI	GTAC	2 cut(s)	696, 919
DpnI	GATC	7 cut(s)	52, 91, 211, 882, 975, 1047, 1329
DpnII	GATC	7 cut(s)	50, 89, 209, 880, 973, 1045, 1327
DrdI	GACNNNNNNGTC	3 cut(s)	23, 604, 1360
DseDI	GACNNNNNNGTC	3 cut(s)	23, 604, 1360
EaeI	YGGCCR	2 cut(s)	1335, 1585
Eam1104I	CTCTTC	1 cut(s)	515
EarI	CTCTTC	1 cut(s)	515
Eco130I	CCWWGG	1 cut(s)	615
Eco31I	GGTCTC	2 cut(s)	271, 289
Eco47I	GGWCC	2 cut(s)	484, 597
Eco57I	CTGAAG	2 cut(s)	776, 977
EcoO109I	RGGNCCY	1 cut(s)	1567
EcoRII	CCWGG	2 cut(s)	592, 1563
EcoT14I	CCWWGG	1 cut(s)	615
EcoT22I	ATGCAT	2 cut(s)	551, 1114
ErhI	CCWWGG	1 cut(s)	615
FaeI	CATG	6 cut(s)	549, 619, 899, 910, 1112, 1336
FalI	AAGNNNNNCTT	2 cut(s)	1059, 1091
FaqI	GGGAC	4 cut(s)	470, 610, 841, 1652
FatI	CATG	6 cut(s)	545, 615, 895, 906, 1108, 1332
FbaI	TGATCA	1 cut(s)	1327
FblI	GTMKAC	1 cut(s)	937
Fnu4HI	GCNGC	7 cut(s)	22, 166, 505, 1140, 1143, 1275, 1425
FokI	GGATG	1 cut(s)	689
Fsp4HI	GCNGC	7 cut(s)	22, 166, 505, 1140, 1143, 1275, 1425
FspBI	CTAG	1 cut(s)	1179
GlaI	GCGC	1 cut(s)	134
GluI	GCNGC	7 cut(s)	22, 166, 505, 1140, 1143, 1275, 1425
GsuI	CTGGAG	3 cut(s)	551, 1170, 1263
HaeIII	GGCC	4 cut(s)	566, 1337, 1569, 1587
HapII	CCGG	8 cut(s)	213, 281, 316, 404, 567, 600, 674, 1666
HgaI	GACGC	2 cut(s)	13, 124
HhaI	GCGC	1 cut(s)	135
Hin1II	CATG	6 cut(s)	549, 619, 899, 910, 1112, 1336
Hin6I	GCGC	1 cut(s)	133
HinP1I	GCGC	1 cut(s)	133
HincII	GTYRAC	1 cut(s)	480
HindII	GTYRAC	1 cut(s)	480
HpaII	CCGG	8 cut(s)	213, 281, 316, 404, 567, 600, 674, 1666
HphI	GGTGA	5 cut(s)	230, 305, 652, 1306, 1356
Hpy166II	GTNNAC	2 cut(s)	480, 938
Hpy188III	TCNNGA	8 cut(s)	154, 530, 668, 930, 1057, 1149, 1593, 1685
Hpy8I	GTNNAC	2 cut(s)	480, 938
Hpy99I	CGWCG	8 cut(s)	29, 50, 103, 140, 155, 262, 265, 292
HpyAV	CCTTC	4 cut(s)	15, 454, 556, 1628
HpyCH4III	ACNGT	3 cut(s)	484, 496, 1096
HpyCH4IV	ACGT	1 cut(s)	917
HpyF10VI	GCNNNNNNNGC	4 cut(s)	109, 271, 546, 1280
HpySE526I	ACGT	1 cut(s)	917
Hsp92II	CATG	6 cut(s)	549, 619, 899, 910, 1112, 1336
HspAI	GCGC	1 cut(s)	133
Ksp22I	TGATCA	1 cut(s)	1327
Kzo9I	GATC	7 cut(s)	50, 89, 209, 880, 973, 1045, 1327
LmnI	GCTCC	5 cut(s)	189, 442, 514, 897, 1282
Lsp1109I	GCAGC	6 cut(s)	33, 177, 1126, 1129, 1286, 1411
LweI	GCATC	2 cut(s)	1154, 1185
MaeI	CTAG	1 cut(s)	1179
MaeII	ACGT	1 cut(s)	917
MaeIII	GTNAC	2 cut(s)	1362, 1615
MalI	GATC	7 cut(s)	52, 91, 211, 882, 975, 1047, 1329
MboI	GATC	7 cut(s)	50, 89, 209, 880, 973, 1045, 1327
MboII	GAAGA	5 cut(s)	138, 532, 782, 1382, 1459
MfeI	CAATTG	2 cut(s)	960, 1188
MflI	RGATCY	3 cut(s)	50, 89, 209
MhlI	GDGCHC	2 cut(s)	894, 1421
MlsI	TGGCCA	2 cut(s)	1337, 1587
MluNI	TGGCCA	2 cut(s)	1337, 1587
MlyI	GAGTC	2 cut(s)	124, 220
MmeI	TCCRAC	7 cut(s)	28, 63, 118, 187, 663, 840, 1501
Mox20I	TGGCCA	2 cut(s)	1337, 1587
Mph1103I	ATGCAT	2 cut(s)	551, 1114
MroXI	GAANNNNTTC	3 cut(s)	145, 365, 1256
MscI	TGGCCA	2 cut(s)	1337, 1587
MseI	TTAA	4 cut(s)	869, 1001, 1232, 1472
MslI	CAYNNNNRTG	1 cut(s)	1437
Msp20I	TGGCCA	2 cut(s)	1337, 1587
MspI	CCGG	8 cut(s)	213, 281, 316, 404, 567, 600, 674, 1666
MspR9I	CCNGG	3 cut(s)	568, 594, 1565
MunI	CAATTG	2 cut(s)	960, 1188
MvaI	CCWGG	2 cut(s)	594, 1565
MvnI	CGCG	3 cut(s)	135, 155, 507
MwoI	GCNNNNNNNGC	4 cut(s)	109, 271, 546, 1280
NciI	CCSGG	1 cut(s)	568
NcoI	CCATGG	1 cut(s)	615
NdeII	GATC	7 cut(s)	50, 89, 209, 880, 973, 1045, 1327
NlaIII	CATG	6 cut(s)	549, 619, 899, 910, 1112, 1336
NlaIV	GGNNCC	6 cut(s)	52, 211, 320, 486, 598, 672
NmeAIII	GCCGAG	1 cut(s)	300
NmuCI	GTSAC	2 cut(s)	1362, 1615
NruI	TCGCGA	1 cut(s)	155
NsiI	ATGCAT	2 cut(s)	551, 1114
NspI	RCATGY	1 cut(s)	1112
PcsI	WCGNNNNNNNCGW	1 cut(s)	263
PdmI	GAANNNNTTC	3 cut(s)	145, 365, 1256
PfeI	GAWTC	9 cut(s)	35, 179, 254, 427, 1051, 1060, 1217, 1252, 1662
PinAI	ACCGGT	2 cut(s)	280, 403
PkrI	GCNGC	7 cut(s)	23, 167, 506, 1141, 1144, 1276, 1426
PleI	GAGTC	2 cut(s)	123, 220
PpsI	GAGTC	2 cut(s)	123, 220
PsiI	TTATAA	2 cut(s)	1022, 1412
Psp6I	CCWGG	2 cut(s)	592, 1563
PspGI	CCWGG	2 cut(s)	592, 1563
PspN4I	GGNNCC	6 cut(s)	52, 211, 320, 486, 598, 672
PspPI	GGNCC	3 cut(s)	484, 597, 1567
PstI	CTGCAG	1 cut(s)	1659
PsuI	RGATCY	3 cut(s)	50, 89, 209
RruI	TCGCGA	1 cut(s)	155
RsaI	GTAC	2 cut(s)	697, 920
RsaNI	GTAC	2 cut(s)	696, 919
RseI	CAYNNNNRTG	1 cut(s)	1437
SaqAI	TTAA	4 cut(s)	869, 1001, 1232, 1472
SatI	GCNGC	7 cut(s)	22, 166, 505, 1140, 1143, 1275, 1425
Sau3AI	GATC	7 cut(s)	50, 89, 209, 880, 973, 1045, 1327
Sau96I	GGNCC	3 cut(s)	484, 597, 1567
SchI	GAGTC	2 cut(s)	124, 220
ScrFI	CCNGG	3 cut(s)	568, 594, 1565
SduI	GDGCHC	2 cut(s)	894, 1421
SfaNI	GCATC	2 cut(s)	1154, 1185
SfcI	CTRYAG	2 cut(s)	1461, 1655
SinI	GGWCC	2 cut(s)	484, 597
SmiMI	CAYNNNNRTG	1 cut(s)	1437
SmlI	CTYRAG	4 cut(s)	384, 928, 1055, 1685
SmoI	CTYRAG	4 cut(s)	384, 928, 1055, 1685
SsiI	CCGC	5 cut(s)	19, 54, 216, 238, 505
SspMI	CTAG	1 cut(s)	1179
StyD4I	CCNGG	3 cut(s)	566, 592, 1563
StyI	CCWWGG	1 cut(s)	615
TaaI	ACNGT	3 cut(s)	484, 496, 1096
TaiI	ACGT	1 cut(s)	920
TaqI	TCGA	3 cut(s)	27, 33, 1538
TatI	WGTACW	1 cut(s)	695
TauI	GCSGC	1 cut(s)	507
TfiI	GAWTC	9 cut(s)	35, 179, 254, 427, 1051, 1060, 1217, 1252, 1662
Tru1I	TTAA	4 cut(s)	869, 1001, 1232, 1472
Tru9I	TTAA	4 cut(s)	869, 1001, 1232, 1472
TscAI	CASTG	7 cut(s)	331, 474, 733, 894, 1099, 1588, 1659
TseFI	GTSAC	2 cut(s)	1362, 1615
TseI	GCWGC	6 cut(s)	21, 165, 1139, 1142, 1274, 1424
Tsp45I	GTSAC	2 cut(s)	1362, 1615
TspDTI	ATGAA	7 cut(s)	122, 137, 284, 311, 895, 1227, 1647
TspGWI	ACGGA	3 cut(s)	94, 139, 1427
TspRI	CASTG	7 cut(s)	331, 474, 733, 894, 1099, 1588, 1659
VpaK11BI	GGWCC	2 cut(s)	484, 597
XapI	RAATTY	3 cut(s)	141, 1234, 1532
XceI	RCATGY	1 cut(s)	1112
XmiI	GTMKAC	1 cut(s)	937
XmnI	GAANNNNTTC	3 cut(s)	145, 365, 1256
XspI	CTAG	1 cut(s)	1179
Zsp2I	ATGCAT	2 cut(s)	551, 1114

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.