Endo-1,4-beta-xylanase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G33830 AT4G33840 AT4G33860 |
| fragaria_vesca | FvH4_2g03792 FvH4_2g03793 FvH4_2g03793 FvH4_2g03840 FvH4_3g40060 |
| malus_domestica | MD05G1100700.v1.1 MD10G1105900.v1.1 MD10G1106500.v1.1 |
| prunus_persica | Prupe.8G145100_v2.0.a1 Prupe.8G145200_v2.0.a1 Prupe.8G145300_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0072231 RchiOBHm_Chr6g0252841 RchiOBHm_Chr6g0252851 |
| rosa_laevigata | RLG00000015059 RLG00000015061 |
| rosa_multiflora | Rmu_co8129022.1_g000001 Rmu_sc0000714.1_g000002 Rmu_sc0000829.1_g000017 Rmu_sc0000829.1_g000029 Rmu_sc0028322.1_g000001 |
| rosa_roxburghii | Rroxscaffold_7G00212390 |
| rosa_rugosa | Rorug05G0417000 Rorug05G0539100 |
| rosa_samantha | Rh5DG505200 Rh6AG055100 Rh6BG049200 Rh6CG047900 Rh6CG048000 Rh6CG048100 Rh6DG043400 Rh6DG043600 Rh6DG043700 |
| rosa_wichuraiana | Rw5G043950 Rw6G004970 Rw6G004990 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1347 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 278, 438 |
| AccI | GTMKAC | 2 cut(s) | 191, 1536 |
| AciI | CCGC | 1 cut(s) | 1374 |
| AclWI | GGATC | 2 cut(s) | 403, 908 |
| AcoI | YGGCCR | 1 cut(s) | 96 |
| AcsI | RAATTY | 5 cut(s) | 242, 814, 1084, 1151, 1434 |
| AcuI | CTGAAG | 2 cut(s) | 842, 1074 |
| AdeI | CACNNNGTG | 1 cut(s) | 901 |
| AfaI | GTAC | 4 cut(s) | 803, 923, 1202, 1394 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 137, 278, 438, 682 |
| AhlI | ACTAGT | 1 cut(s) | 386 |
| AjnI | CCWGG | 1 cut(s) | 1656 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1435, 1467 |
| AluBI | AGCT | 7 cut(s) | 316, 374, 490, 693, 1121, 1213, 1543 |
| AluI | AGCT | 7 cut(s) | 316, 374, 490, 693, 1121, 1213, 1543 |
| Alw26I | GTCTC | 5 cut(s) | 544, 579, 1176, 1278, 1459 |
| AlwI | GGATC | 2 cut(s) | 403, 908 |
| Ama87I | CYCGRG | 1 cut(s) | 1268 |
| AoxI | GGCC | 6 cut(s) | 96, 457, 478, 892, 1012, 1614 |
| ApoI | RAATTY | 5 cut(s) | 242, 814, 1084, 1151, 1434 |
| AspLEI | GCGC | 1 cut(s) | 710 |
| AspS9I | GGNCC | 5 cut(s) | 441, 479, 1012, 1376, 1741 |
| AsuC2I | CCSGG | 3 cut(s) | 482, 1193, 1236 |
| AsuHPI | GGTGA | 3 cut(s) | 547, 1418, 1538 |
| AvaI | CYCGRG | 1 cut(s) | 1268 |
| AvaII | GGWCC | 3 cut(s) | 441, 1376, 1741 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1072, 1104 |
| BccI | CCATC | 5 cut(s) | 680, 1103, 1118, 1172, 1249 |
| BceAI | ACGGC | 1 cut(s) | 190 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 226, 260 |
| BciT130I | CCWGG | 1 cut(s) | 1658 |
| BciVI | GTATCC | 1 cut(s) | 330 |
| BclI | TGATCA | 1 cut(s) | 583 |
| BcnI | CCSGG | 3 cut(s) | 482, 1193, 1236 |
| BcoDI | GTCTC | 5 cut(s) | 544, 579, 1176, 1278, 1459 |
| BcuI | ACTAGT | 1 cut(s) | 386 |
| BfaI | CTAG | 1 cut(s) | 387 |
| BfuAI | ACCTGC | 1 cut(s) | 1347 |
| BfuI | GTATCC | 1 cut(s) | 330 |
| BglII | AGATCT | 1 cut(s) | 1307 |
| BlpI | GCTNAGC | 1 cut(s) | 486 |
| Bme1390I | CCNGG | 4 cut(s) | 482, 1193, 1236, 1658 |
| Bme18I | GGWCC | 3 cut(s) | 441, 1376, 1741 |
| BmeT110I | CYCGRG | 1 cut(s) | 1268 |
| BmgT120I | GGNCC | 5 cut(s) | 441, 479, 1012, 1376, 1741 |
| BmiI | GGNNCC | 1 cut(s) | 687 |
| BmrFI | CCNGG | 4 cut(s) | 482, 1193, 1236, 1658 |
| BmrI | ACTGGG | 2 cut(s) | 127, 913 |
| BmsI | GCATC | 6 cut(s) | 111, 482, 625, 695, 838, 1730 |
| BmuI | ACTGGG | 2 cut(s) | 127, 913 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1270 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 821, 853 |
| BpmI | CTGGAG | 1 cut(s) | 197 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 486 |
| BpuEI | CTTGAG | 1 cut(s) | 199 |
| BpuMI | CCSGG | 3 cut(s) | 482, 1193, 1236 |
| BsaBI | GATNNNNATC | 1 cut(s) | 954 |
| BsaI | GGTCTC | 1 cut(s) | 1459 |
| BsaJI | CCNNGG | 3 cut(s) | 59, 1191, 1627 |
| BsaWI | WCCGGW | 2 cut(s) | 8, 364 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 557, 587 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 137, 278, 438, 682 |
| Bse1I | ACTGG | 6 cut(s) | 133, 755, 919, 966, 1528, 1716 |
| Bse3DI | GCAATG | 2 cut(s) | 879, 1733 |
| Bse8I | GATNNNNATC | 1 cut(s) | 954 |
| BseBI | CCWGG | 1 cut(s) | 1658 |
| BseDI | CCNNGG | 3 cut(s) | 59, 1191, 1627 |
| BseGI | GGATG | 9 cut(s) | 402, 672, 710, 916, 1036, 1183, 1369, 1481, 1721 |
| BseJI | GATNNNNATC | 1 cut(s) | 954 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 137, 278, 438, 682 |
| BseMI | GCAATG | 2 cut(s) | 879, 1733 |
| BseMII | CTCAG | 1 cut(s) | 477 |
| BseNI | ACTGG | 6 cut(s) | 133, 755, 919, 966, 1528, 1716 |
| BseRI | GAGGAG | 1 cut(s) | 1181 |
| BseYI | CCCAGC | 1 cut(s) | 689 |
| Bsh1285I | CGRYCG | 1 cut(s) | 9 |
| BshFI | GGCC | 6 cut(s) | 98, 459, 480, 894, 1014, 1616 |
| BsiEI | CGRYCG | 1 cut(s) | 9 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1268 |
| BsiSI | CCGG | 5 cut(s) | 9, 365, 482, 1193, 1236 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 137, 278, 438, 682 |
| BsmAI | GTCTC | 5 cut(s) | 544, 579, 1176, 1278, 1459 |
| BsmI | GAATGC | 2 cut(s) | 475, 664 |
| BsnI | GGCC | 6 cut(s) | 98, 459, 480, 894, 1014, 1616 |
| Bso31I | GGTCTC | 1 cut(s) | 1459 |
| BsoBI | CYCGRG | 1 cut(s) | 1268 |
| Bsp143I | GATC | 5 cut(s) | 395, 583, 913, 1307, 1404 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 486 |
| Bsp19I | CCATGG | 1 cut(s) | 1627 |
| BspACI | CCGC | 1 cut(s) | 1374 |
| BspANI | GGCC | 6 cut(s) | 98, 459, 480, 894, 1014, 1616 |
| BspCNI | CTCAG | 1 cut(s) | 478 |
| BspHI | TCATGA | 4 cut(s) | 580, 996, 1143, 1407 |
| BspLI | GGNNCC | 1 cut(s) | 687 |
| BspMI | ACCTGC | 1 cut(s) | 1347 |
| BspPI | GGATC | 2 cut(s) | 403, 908 |
| BspTNI | GGTCTC | 1 cut(s) | 1459 |
| BsrDI | GCAATG | 2 cut(s) | 879, 1733 |
| BsrI | ACTGG | 6 cut(s) | 133, 755, 919, 966, 1528, 1716 |
| BssECI | CCNNGG | 3 cut(s) | 59, 1191, 1627 |
| BssMI | GATC | 5 cut(s) | 395, 583, 913, 1307, 1404 |
| BssT1I | CCWWGG | 1 cut(s) | 1627 |
| Bst2UI | CCWGG | 1 cut(s) | 1658 |
| Bst4CI | ACNGT | 3 cut(s) | 63, 466, 552 |
| Bst6I | CTCTTC | 1 cut(s) | 1585 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 635 |
| BstC8I | GCNNGC | 3 cut(s) | 100, 235, 1570 |
| BstDEI | CTNAG | 4 cut(s) | 486, 1197, 1214, 1547 |
| BstDSI | CCRYGG | 2 cut(s) | 59, 1627 |
| BstF5I | GGATG | 9 cut(s) | 402, 672, 710, 916, 1036, 1183, 1369, 1481, 1721 |
| BstHHI | GCGC | 1 cut(s) | 710 |
| BstKTI | GATC | 5 cut(s) | 398, 586, 916, 1310, 1407 |
| BstMAI | GTCTC | 5 cut(s) | 544, 579, 1176, 1278, 1459 |
| BstMBI | GATC | 5 cut(s) | 395, 583, 913, 1307, 1404 |
| BstMCI | CGRYCG | 1 cut(s) | 9 |
| BstNI | CCWGG | 1 cut(s) | 1658 |
| BstNSI | RCATGY | 1 cut(s) | 278 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1270 |
| BstSCI | CCNGG | 4 cut(s) | 480, 1191, 1234, 1656 |
| BstX2I | RGATCY | 1 cut(s) | 1307 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 140 |
| BstYI | RGATCY | 1 cut(s) | 1307 |
| BsuI | GTATCC | 1 cut(s) | 330 |
| BsuRI | GGCC | 6 cut(s) | 98, 459, 480, 894, 1014, 1616 |
| BtgI | CCRYGG | 2 cut(s) | 59, 1627 |
| BtsCI | GGATG | 9 cut(s) | 402, 672, 710, 916, 1036, 1183, 1369, 1481, 1721 |
| BtsIMutI | CAGTG | 2 cut(s) | 1650, 1723 |
| BveI | ACCTGC | 1 cut(s) | 1347 |
| Cac8I | GCNNGC | 3 cut(s) | 100, 235, 1570 |
| CciI | TCATGA | 4 cut(s) | 580, 996, 1143, 1407 |
| CfoI | GCGC | 1 cut(s) | 710 |
| Cfr13I | GGNCC | 5 cut(s) | 441, 479, 1012, 1376, 1741 |
| CpoI | CGGWCCG | 1 cut(s) | 1376 |
| Csp6I | GTAC | 4 cut(s) | 802, 922, 1201, 1393 |
| CspI | CGGWCCG | 1 cut(s) | 1376 |
| CviQI | GTAC | 4 cut(s) | 802, 922, 1201, 1393 |
| DdeI | CTNAG | 4 cut(s) | 486, 1197, 1214, 1547 |
| DpnI | GATC | 5 cut(s) | 397, 585, 915, 1309, 1406 |
| DpnII | GATC | 5 cut(s) | 395, 583, 913, 1307, 1404 |
| DraIII | CACNNNGTG | 1 cut(s) | 901 |
| EaeI | YGGCCR | 1 cut(s) | 96 |
| Eam1104I | CTCTTC | 1 cut(s) | 1585 |
| EarI | CTCTTC | 1 cut(s) | 1585 |
| Eco130I | CCWWGG | 1 cut(s) | 1627 |
| Eco147I | AGGCCT | 1 cut(s) | 1616 |
| Eco31I | GGTCTC | 1 cut(s) | 1459 |
| Eco47I | GGWCC | 3 cut(s) | 441, 1376, 1741 |
| Eco57I | CTGAAG | 2 cut(s) | 842, 1074 |
| Eco88I | CYCGRG | 1 cut(s) | 1268 |
| EcoRII | CCWGG | 1 cut(s) | 1656 |
| EcoT14I | CCWWGG | 1 cut(s) | 1627 |
| EcoT22I | ATGCAT | 1 cut(s) | 475 |
| ErhI | CCWWGG | 1 cut(s) | 1627 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1556, 1588 |
| FbaI | TGATCA | 1 cut(s) | 583 |
| FblI | GTMKAC | 2 cut(s) | 191, 1536 |
| FokI | GGATG | 9 cut(s) | 389, 659, 717, 923, 1043, 1190, 1376, 1488, 1708 |
| FspBI | CTAG | 1 cut(s) | 387 |
| GlaI | GCGC | 1 cut(s) | 709 |
| GsaI | CCCAGC | 1 cut(s) | 693 |
| GsuI | CTGGAG | 1 cut(s) | 197 |
| HaeIII | GGCC | 6 cut(s) | 98, 459, 480, 894, 1014, 1616 |
| HapII | CCGG | 5 cut(s) | 9, 365, 482, 1193, 1236 |
| HhaI | GCGC | 1 cut(s) | 710 |
| Hin6I | GCGC | 1 cut(s) | 708 |
| HinP1I | GCGC | 1 cut(s) | 708 |
| HincII | GTYRAC | 3 cut(s) | 520, 1039, 1537 |
| HindII | GTYRAC | 3 cut(s) | 520, 1039, 1537 |
| HindIII | AAGCTT | 2 cut(s) | 314, 1211 |
| HpaI | GTTAAC | 1 cut(s) | 1039 |
| HpaII | CCGG | 5 cut(s) | 9, 365, 482, 1193, 1236 |
| HphI | GGTGA | 3 cut(s) | 547, 1418, 1538 |
| Hpy166II | GTNNAC | 7 cut(s) | 157, 192, 520, 555, 756, 1039, 1537 |
| Hpy188I | TCNGA | 3 cut(s) | 704, 890, 1380 |
| Hpy8I | GTNNAC | 7 cut(s) | 157, 192, 520, 555, 756, 1039, 1537 |
| HpyAV | CCTTC | 6 cut(s) | 445, 635, 1214, 1466, 1558, 1631 |
| HpyCH4III | ACNGT | 3 cut(s) | 63, 466, 552 |
| HpyCH4IV | ACGT | 2 cut(s) | 47, 615 |
| HpyF3I | CTNAG | 4 cut(s) | 486, 1197, 1214, 1547 |
| HpySE526I | ACGT | 2 cut(s) | 47, 615 |
| HspAI | GCGC | 1 cut(s) | 708 |
| Ksp22I | TGATCA | 1 cut(s) | 583 |
| KspAI | GTTAAC | 1 cut(s) | 1039 |
| Kzo9I | GATC | 5 cut(s) | 395, 583, 913, 1307, 1404 |
| LmnI | GCTCC | 2 cut(s) | 691, 1399 |
| LweI | GCATC | 6 cut(s) | 111, 482, 625, 695, 838, 1730 |
| MaeI | CTAG | 1 cut(s) | 387 |
| MaeII | ACGT | 2 cut(s) | 47, 615 |
| MaeIII | GTNAC | 5 cut(s) | 257, 367, 772, 937, 1238 |
| MalI | GATC | 5 cut(s) | 397, 585, 915, 1309, 1406 |
| MboI | GATC | 5 cut(s) | 395, 583, 913, 1307, 1404 |
| MboII | GAAGA | 4 cut(s) | 610, 1080, 1302, 1572 |
| MfeI | CAATTG | 2 cut(s) | 433, 1105 |
| MflI | RGATCY | 1 cut(s) | 1307 |
| MlyI | GAGTC | 4 cut(s) | 1178, 1260, 1280, 1294 |
| MmeI | TCCRAC | 1 cut(s) | 700 |
| Mph1103I | ATGCAT | 1 cut(s) | 475 |
| MseI | TTAA | 4 cut(s) | 1038, 1155, 1250, 1493 |
| MslI | CAYNNNNRTG | 1 cut(s) | 411 |
| MspI | CCGG | 5 cut(s) | 9, 365, 482, 1193, 1236 |
| MspR9I | CCNGG | 4 cut(s) | 482, 1193, 1236, 1658 |
| MunI | CAATTG | 2 cut(s) | 433, 1105 |
| Mva1269I | GAATGC | 2 cut(s) | 475, 664 |
| MvaI | CCWGG | 1 cut(s) | 1658 |
| NciI | CCSGG | 3 cut(s) | 482, 1193, 1236 |
| NcoI | CCATGG | 1 cut(s) | 1627 |
| NdeII | GATC | 5 cut(s) | 395, 583, 913, 1307, 1404 |
| NlaIV | GGNNCC | 1 cut(s) | 687 |
| NmeAIII | GCCGAG | 1 cut(s) | 74 |
| NmuCI | GTSAC | 1 cut(s) | 772 |
| NsiI | ATGCAT | 1 cut(s) | 475 |
| NspI | RCATGY | 1 cut(s) | 278 |
| PaeR7I | CTCGAG | 1 cut(s) | 1268 |
| PagI | TCATGA | 4 cut(s) | 580, 996, 1143, 1407 |
| PceI | AGGCCT | 1 cut(s) | 1616 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 548 |
| PctI | GAATGC | 2 cut(s) | 475, 664 |
| PfeI | GAWTC | 7 cut(s) | 147, 224, 428, 601, 621, 1381, 1661 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 278, 438 |
| PleI | GAGTC | 4 cut(s) | 1178, 1260, 1279, 1293 |
| PpsI | GAGTC | 4 cut(s) | 1178, 1260, 1279, 1293 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1270 |
| Psp6I | CCWGG | 1 cut(s) | 1656 |
| PspFI | CCCAGC | 1 cut(s) | 689 |
| PspGI | CCWGG | 1 cut(s) | 1656 |
| PspN4I | GGNNCC | 1 cut(s) | 687 |
| PspPI | GGNCC | 5 cut(s) | 441, 479, 1012, 1376, 1741 |
| PspXI | VCTCGAGB | 1 cut(s) | 1268 |
| PsuI | RGATCY | 1 cut(s) | 1307 |
| RsaI | GTAC | 4 cut(s) | 803, 923, 1202, 1394 |
| RsaNI | GTAC | 4 cut(s) | 802, 922, 1201, 1393 |
| RseI | CAYNNNNRTG | 1 cut(s) | 411 |
| Rsr2I | CGGWCCG | 1 cut(s) | 1376 |
| RsrII | CGGWCCG | 1 cut(s) | 1376 |
| SalI | GTCGAC | 1 cut(s) | 1535 |
| SaqAI | TTAA | 4 cut(s) | 1038, 1155, 1250, 1493 |
| Sau3AI | GATC | 5 cut(s) | 395, 583, 913, 1307, 1404 |
| Sau96I | GGNCC | 5 cut(s) | 441, 479, 1012, 1376, 1741 |
| SchI | GAGTC | 4 cut(s) | 1178, 1260, 1280, 1294 |
| ScrFI | CCNGG | 4 cut(s) | 482, 1193, 1236, 1658 |
| SfaNI | GCATC | 6 cut(s) | 111, 482, 625, 695, 838, 1730 |
| Sfr274I | CTCGAG | 1 cut(s) | 1268 |
| SinI | GGWCC | 3 cut(s) | 441, 1376, 1741 |
| SlaI | CTCGAG | 1 cut(s) | 1268 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 411 |
| SmlI | CTYRAG | 2 cut(s) | 178, 1268 |
| SmoI | CTYRAG | 2 cut(s) | 178, 1268 |
| SpeI | ACTAGT | 1 cut(s) | 386 |
| SseBI | AGGCCT | 1 cut(s) | 1616 |
| SsiI | CCGC | 1 cut(s) | 1374 |
| SspMI | CTAG | 1 cut(s) | 387 |
| StuI | AGGCCT | 1 cut(s) | 1616 |
| StyD4I | CCNGG | 4 cut(s) | 480, 1191, 1234, 1656 |
| StyI | CCWWGG | 1 cut(s) | 1627 |
| TaaI | ACNGT | 3 cut(s) | 63, 466, 552 |
| TaiI | ACGT | 2 cut(s) | 50, 618 |
| TaqI | TCGA | 5 cut(s) | 105, 604, 948, 1269, 1536 |
| TfiI | GAWTC | 7 cut(s) | 147, 224, 428, 601, 621, 1381, 1661 |
| Tru1I | TTAA | 4 cut(s) | 1038, 1155, 1250, 1493 |
| Tru9I | TTAA | 4 cut(s) | 1038, 1155, 1250, 1493 |
| TscAI | CASTG | 2 cut(s) | 1657, 1723 |
| TseFI | GTSAC | 1 cut(s) | 772 |
| Tsp45I | GTSAC | 1 cut(s) | 772 |
| TspGWI | ACGGA | 1 cut(s) | 670 |
| TspRI | CASTG | 2 cut(s) | 1657, 1723 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 278, 438 |
| VpaK11BI | GGWCC | 3 cut(s) | 441, 1376, 1741 |
| XapI | RAATTY | 5 cut(s) | 242, 814, 1084, 1151, 1434 |
| XceI | RCATGY | 1 cut(s) | 278 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 275, 926 |
| XhoI | CTCGAG | 1 cut(s) | 1268 |
| XmiI | GTMKAC | 2 cut(s) | 191, 1536 |
| XspI | CTAG | 1 cut(s) | 387 |
| Zsp2I | ATGCAT | 1 cut(s) | 475 |