Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0002751

Physical Location & Seq

Genomic Coordinates Forward (+)

62855489 .. 62861055

Gene Structure 5567 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00212390.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1980 bp

ATGCTTGAGGGAAAATATAGTCTGCTAATGCTGTTATGTACATTTATTTTTGCAGTGTTTGAAGTATCAGCCTTACCATATGATTACTCGGCAAGTATTGAGTGTTTGGCCAATCCTCAGAAACCACAATATGGTGGAGGGATCATCATAAACCCGGAATTAAATGATGGGTTGAAAGGATGGTCTATTTTTGGCAATGCAAAACTACAACACATAGAATCACAAGGCAACAAATTCCTTGTGGCTCATAGTAGAACGCAACCTCATGACAGTATGTCTCAAAAGGTTTACTTGCAAAGTGACAAGCTCTACACATTTTCCGCTTGGATAAAAGTGAGTACTGGTAGTGACGTTCCAGTAGCAGCTACTTTCAAGACGGCTTCTGGATTCAAACGTGCTGGTGAGATCATTGCAGAATCAAATTGTTGGTCCATGCTCAAGGGTGGTCTAACAGTTGAAGCTTCAGGCGCTGCGGAGCTCTATTTTGAGAGCAAGAACACCTCCGTTGAGATCTGGGTTGACAGCATCTCGTTGCAAGCATTCACCGAAAAGGAATGGAAGTCTCATCAAGATCGAAGCATTGCCAAGAATCGTAAGAGCAAAGTGCACATCCAGGCAGTTGATGCAGAAGGAAATCCTCTGCCAAATGCAACTATCTCCATCCAACAAAAAGTTCCAAGTTTCCCTTTTGGTTGTTCCATTACCAAGCTCATCCTCAACAACCCTGCCCACCAAAATTGGTTCACGTCAAGGTTCACAGTAACAACATTTGGGGATGAAATGAAATGGTACAGTACAGAGAGTATCCAGGGACGTGAGGACTACTCAGTAGCTGATGCCATGCTTCTGTTTTCAGAAGAAAACCACATTGCAGTCAGAGGCCACAATGTGTTCTGGGATGATCCGCAATACCAACTCAGTTGGGTCAAATCACTCAATACACATCAACTTATTAATGCAACTTACAAGAGGCTAAATTCTATCATGCAGAGATATAAAAGCAAGCTCATTGCCTGGGATGTTGTTAACGAAAATTTACATTGGAATTTCTTTGAAAGTAGGATGGGTGCAAATGCTTCAACAATTTTTTATAACTGGGCTATTAAAGCTGATGGAGAAACCCCCTTGTTCCTGAATGATTTTAATACCATTGAAGAGAGCAGAGATGGAGCATCCATGCCGGCTATGTACCTTCGAAAGCTCAGAGAGATTCAGAGCTTCCCAGGCAACAGTGGAGGACGGTTTGGGATTGGGCTTGAATCTCATTTCAATAGTAGTACTCCAAACCTTCCTTACATAAGAGCTTCTCTCGATACCCTTGGTGTTGCAAATGTGCCCATTTGGATCACTGAATTGGACGTAGCAAGCCATCTCGATCAGGTCGCGAAGGAGGCGCTACTCCATGAATTGGTGGATCCAAATCAACTTTGGGATCCGGGATTTGTGGGGTGGACGAGGTACTCCGATCGAATCCTTGGGCGGTGGGATTCCCGATCTGGAATCTGCCATGCTACATTGACGATGCGGGGTTGCGGTTCGGCGAGTGGGGAAGCGGCTCGGTGCAACCGCATAGGTGAGGTTCTAAGAGAGTTGCAGTCTCACCCTCATATTCAAGGAATCATTATGTGGGCTGGACGGGGACAGAAAGGATGTTACAGAATGTGTTTGACAGATGAAAACTTCAACAACTTGCCAACCGGTGACGTTGTGGACAAGTTACTGCAGGAATGGGGTTATAGGAGCTCGGCTTCTTTCACAGCAGATGCCAATGGTTTCTTCGAGGCCTCTCTTCCCCATGGAGATTATGACATGAAGATCAGTCATTCTTCAGCGACGCATTCCTCCGGGGTTCACAAATTGAATGTGGCATCAATTACTATGTCTCTCCAACTTTCGTTTGAGATATCTTATTCTGTGGGTGTTTTGAGCATATCCGTAACTAGAAATTATGATGTTCAAAAAGAAAAACAAACACTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000272 GO:0003674 GO:0003824 GO:0004553 GO:0005575 GO:0005576 GO:0005975 GO:0005976 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0010383 GO:0010410 GO:0016052 GO:0016787 GO:0016798 GO:0031176 GO:0043170 GO:0044036 GO:0044237 GO:0044238 GO:0044260 GO:0045491 GO:0045493 GO:0071554 GO:0071704 GO:0097599 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CBM_4_9 Glyco_hydro_10

Protein Analysis

659

Amino Acids

73.76

Weight (kDa)

6.22

Isoelectric Point (pI)

37.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CBM_4_9	PF02018	48 - 166	3.1e-08	Carbohydrate binding domain
Glyco_hydro_10	PF00331	228 - 461	1e-33	Glycosyl hydrolase family 10

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002751)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33830 AT4G33840 AT4G33860
fragaria_vesca	FvH4_2g03792 FvH4_2g03793 FvH4_2g03793 FvH4_2g03840 FvH4_3g40060
malus_domestica	MD05G1100700.v1.1 MD10G1105900.v1.1 MD10G1106500.v1.1
prunus_persica	Prupe.8G145100_v2.0.a1 Prupe.8G145200_v2.0.a1 Prupe.8G145300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr5g0072231 RchiOBHm_Chr6g0252841 RchiOBHm_Chr6g0252851
rosa_laevigata	RLG00000015059 RLG00000015061
rosa_multiflora	Rmu_co8129022.1_g000001 Rmu_sc0000714.1_g000002 Rmu_sc0000829.1_g000017 Rmu_sc0000829.1_g000029 Rmu_sc0028322.1_g000001
rosa_roxburghii	Rroxscaffold_7G00212390
rosa_rugosa	Rorug05G0417000 Rorug05G0539100
rosa_samantha	Rh5DG505200 Rh6AG055100 Rh6BG049200 Rh6CG047900 Rh6CG048000 Rh6CG048100 Rh6DG043400 Rh6DG043600 Rh6DG043700
rosa_wichuraiana	Rw5G043950 Rw6G004970 Rw6G004990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1092
AccB7I	CCANNNNNTGG	2 cut(s)	131, 1408
AccII	CGCG	1 cut(s)	1385
AciI	CCGC	8 cut(s)	321, 473, 905, 1480, 1525, 1533, 1553, 1567
AclWI	GGATC	7 cut(s)	149, 896, 1352, 1409, 1422, 1427, 1440
AcoI	YGGCCR	1 cut(s)	108
AcsI	RAATTY	4 cut(s)	233, 976, 1033, 1045
AcuI	CTGAAG	2 cut(s)	447, 1812
AdeI	CACNNNGTG	1 cut(s)	889
AfaI	GTAC	7 cut(s)	40, 340, 791, 796, 1190, 1279, 1460
AfiI	CCNNNNNNNGG	2 cut(s)	131, 1408
AgeI	ACCGGT	1 cut(s)	1697
AhdI	GACNNNNNGTC	1 cut(s)	274
AjiI	CACGTC	2 cut(s)	747, 815
AjnI	CCWGG	4 cut(s)	612, 807, 1013, 1222
AjuI	GAANNNNNNNTTGG	4 cut(s)	657, 689, 1760, 1792
Alw21I	GWGCWC	3 cut(s)	480, 609, 1745
Alw26I	GTCTC	4 cut(s)	282, 567, 1602, 1887
Alw44I	GTGCAC	1 cut(s)	605
AlwI	GGATC	7 cut(s)	149, 896, 1352, 1409, 1422, 1427, 1440
AlwNI	CAGNNNCTG	2 cut(s)	470, 833
AoxI	GGCC	3 cut(s)	108, 880, 1782
ApaLI	GTGCAC	1 cut(s)	605
ApeKI	GCWGC	2 cut(s)	362, 470
ApoI	RAATTY	4 cut(s)	233, 976, 1033, 1045
ArsI	GACNNNNNNTTYG	2 cut(s)	413, 445
AseI	ATTAAT	1 cut(s)	954
AsiGI	ACCGGT	1 cut(s)	1697
AspLEI	GCGC	2 cut(s)	470, 1396
AspS9I	GGNCC	1 cut(s)	429
AsuC2I	CCSGG	3 cut(s)	155, 1437, 1846
AsuHPI	GGTGA	5 cut(s)	413, 535, 1586, 1592, 1712
AsuII	TTCGAA	1 cut(s)	1195
AvaII	GGWCC	1 cut(s)	429
BaeGI	GKGCMC	2 cut(s)	609, 1338
BalI	TGGCCA	1 cut(s)	110
BamHI	GGATCC	2 cut(s)	1414, 1432
BanII	GRGCYC	2 cut(s)	480, 1745
Bbv12I	GWGCWC	3 cut(s)	480, 609, 1745
BbvI	GCAGC	2 cut(s)	374, 457
BccI	CCATC	7 cut(s)	161, 174, 668, 1057, 1106, 1160, 1377
BceAI	ACGGC	1 cut(s)	393
BciT130I	CCWGG	4 cut(s)	614, 809, 1015, 1224
BciVI	GTATCC	1 cut(s)	815
BcnI	CCSGG	3 cut(s)	155, 1437, 1846
BcoDI	GTCTC	4 cut(s)	282, 567, 1602, 1887
BfaI	CTAG	1 cut(s)	1941
BfmI	CTRYAG	1 cut(s)	1721
BfoI	RGCGCY	2 cut(s)	471, 1397
BfuI	GTATCC	1 cut(s)	815
BglII	AGATCT	1 cut(s)	510
BisI	GCNGC	3 cut(s)	363, 471, 1554
BlsI	GCNGC	3 cut(s)	364, 472, 1555
BmcAI	AGTACT	2 cut(s)	340, 1279
Bme1390I	CCNGG	7 cut(s)	155, 614, 809, 1015, 1224, 1437, 1846
Bme18I	GGWCC	1 cut(s)	429
BmeRI	GACNNNNNGTC	1 cut(s)	274
BmgBI	CACGTC	2 cut(s)	747, 815
BmgT120I	GGNCC	1 cut(s)	429
BmiI	GGNNCC	2 cut(s)	1416, 1434
BmrFI	CCNGG	7 cut(s)	155, 614, 809, 1015, 1224, 1437, 1846
BmrI	ACTGGG	1 cut(s)	1105
BmsI	GCATC	7 cut(s)	534, 613, 826, 1181, 1512, 1753, 1877
BmuI	ACTGGG	1 cut(s)	1105
BplI	GAGNNNNNCTC	4 cut(s)	809, 841, 1293, 1325
Bpu14I	TTCGAA	1 cut(s)	1195
BpuEI	CTTGAG	2 cut(s)	26, 422
BpuMI	CCSGG	3 cut(s)	155, 1437, 1846
BsaBI	GATNNNNATC	1 cut(s)	1419
BsaJI	CCNNGG	7 cut(s)	808, 1014, 1222, 1318, 1474, 1795, 1845
BsaWI	WCCGGW	1 cut(s)	1697
Bsc4I	CCNNNNNNNGG	2 cut(s)	131, 1408
Bse118I	RCCGGY	2 cut(s)	1180, 1697
Bse1I	ACTGG	3 cut(s)	346, 356, 1100
Bse3DI	GCAATG	5 cut(s)	202, 408, 579, 867, 1008
Bse8I	GATNNNNATC	1 cut(s)	1419
BseBI	CCWGG	4 cut(s)	614, 809, 1015, 1224
BseDI	CCNNGG	7 cut(s)	808, 1014, 1222, 1318, 1474, 1795, 1845
BseJI	GATNNNNATC	1 cut(s)	1419
BseLI	CCNNNNNNNGG	2 cut(s)	131, 1408
BseMI	GCAATG	5 cut(s)	202, 408, 579, 867, 1008
BseMII	CTCAG	4 cut(s)	131, 840, 931, 1216
BseNI	ACTGG	3 cut(s)	346, 356, 1100
BseSI	GKGCMC	2 cut(s)	609, 1338
BseXI	GCAGC	2 cut(s)	374, 457
Bsh1236I	CGCG	1 cut(s)	1385
Bsh1285I	CGRYCG	1 cut(s)	1468
BshFI	GGCC	3 cut(s)	110, 882, 1784
BshTI	ACCGGT	1 cut(s)	1697
BsiEI	CGRYCG	1 cut(s)	1468
BsiHKAI	GWGCWC	3 cut(s)	480, 609, 1745
BsiSI	CCGG	5 cut(s)	155, 1181, 1436, 1698, 1845
BslFI	GGGAC	2 cut(s)	825, 1653
BslI	CCNNNNNNNGG	2 cut(s)	131, 1408
BsmAI	GTCTC	4 cut(s)	282, 567, 1602, 1887
BsmFI	GGGAC	2 cut(s)	825, 1653
BsmI	GAATGC	2 cut(s)	539, 1837
BsnI	GGCC	3 cut(s)	110, 882, 1784
Bsp119I	TTCGAA	1 cut(s)	1195
Bsp1286I	GDGCHC	4 cut(s)	480, 609, 1338, 1745
Bsp1407I	TGTACA	1 cut(s)	38
Bsp19I	CCATGG	1 cut(s)	1795
Bsp68I	TCGCGA	1 cut(s)	1385
BspACI	CCGC	8 cut(s)	321, 473, 905, 1480, 1525, 1533, 1553, 1567
BspANI	GGCC	3 cut(s)	110, 882, 1784
BspCNI	CTCAG	4 cut(s)	130, 839, 930, 1215
BspFNI	CGCG	1 cut(s)	1385
BspHI	TCATGA	1 cut(s)	265
BspLI	GGNNCC	2 cut(s)	1416, 1434
BspMAI	CTGCAG	1 cut(s)	1725
BspPI	GGATC	7 cut(s)	149, 896, 1352, 1409, 1422, 1427, 1440
BspT104I	TTCGAA	1 cut(s)	1195
BsrDI	GCAATG	5 cut(s)	202, 408, 579, 867, 1008
BsrFI	RCCGGY	2 cut(s)	1180, 1697
BsrGI	TGTACA	1 cut(s)	38
BsrI	ACTGG	3 cut(s)	346, 356, 1100
BssAI	RCCGGY	2 cut(s)	1180, 1697
BssECI	CCNNGG	7 cut(s)	808, 1014, 1222, 1318, 1474, 1795, 1845
BssT1I	CCWWGG	3 cut(s)	1318, 1474, 1795
Bst2UI	CCWGG	4 cut(s)	614, 809, 1015, 1224
Bst4CI	ACNGT	6 cut(s)	272, 454, 760, 794, 1232, 1242
Bst6I	CTCTTC	2 cut(s)	1149, 1794
BstAPI	GCANNNNNTGC	1 cut(s)	623
BstAUI	TGTACA	1 cut(s)	38
BstBI	TTCGAA	1 cut(s)	1195
BstC8I	GCNNGC	4 cut(s)	537, 1004, 1182, 1366
BstDEI	CTNAG	5 cut(s)	117, 826, 917, 1202, 1583
BstDSI	CCRYGG	1 cut(s)	1795
BstFNI	CGCG	1 cut(s)	1385
BstH2I	RGCGCY	2 cut(s)	471, 1397
BstHHI	GCGC	2 cut(s)	470, 1396
BstMAI	GTCTC	4 cut(s)	282, 567, 1602, 1887
BstMCI	CGRYCG	1 cut(s)	1468
BstMWI	GCNNNNNNNGC	5 cut(s)	467, 623, 1106, 1224, 1391
BstNI	CCWGG	4 cut(s)	614, 809, 1015, 1224
BstSCI	CCNGG	7 cut(s)	153, 612, 807, 1013, 1222, 1435, 1844
BstSFI	CTRYAG	1 cut(s)	1721
BstSLI	GKGCMC	2 cut(s)	609, 1338
BstUI	CGCG	1 cut(s)	1385
BstV1I	GCAGC	2 cut(s)	374, 457
BstX2I	RGATCY	3 cut(s)	510, 1414, 1432
BstYI	RGATCY	3 cut(s)	510, 1414, 1432
BsuI	GTATCC	1 cut(s)	815
BsuRI	GGCC	3 cut(s)	110, 882, 1784
BtgI	CCRYGG	1 cut(s)	1795
BtrI	CACGTC	2 cut(s)	747, 815
BtsI	GCAGTG	1 cut(s)	60
BtsIMutI	CAGTG	3 cut(s)	60, 1237, 1347
BtuMI	TCGCGA	1 cut(s)	1385
Cac8I	GCNNGC	4 cut(s)	537, 1004, 1182, 1366
CaiI	CAGNNNCTG	2 cut(s)	470, 833
CciI	TCATGA	1 cut(s)	265
CfoI	GCGC	2 cut(s)	470, 1396
Cfr10I	RCCGGY	2 cut(s)	1180, 1697
Cfr13I	GGNCC	1 cut(s)	429
CseI	GACGC	1 cut(s)	1843
Csp6I	GTAC	7 cut(s)	39, 339, 790, 795, 1189, 1278, 1459
CspAI	ACCGGT	1 cut(s)	1697
CspCI	CAANNNNNGTGG	2 cut(s)	719, 754
CviAII	CATG	9 cut(s)	266, 433, 841, 985, 1177, 1403, 1508, 1796, 1810
CviQI	GTAC	7 cut(s)	39, 339, 790, 795, 1189, 1278, 1459
DdeI	CTNAG	5 cut(s)	117, 826, 917, 1202, 1583
DraIII	CACNNNGTG	1 cut(s)	889
DriI	GACNNNNNGTC	1 cut(s)	274
EaeI	YGGCCR	1 cut(s)	108
Eam1104I	CTCTTC	2 cut(s)	1149, 1794
Eam1105I	GACNNNNNGTC	1 cut(s)	274
EarI	CTCTTC	2 cut(s)	1149, 1794
Ecl136II	GAGCTC	2 cut(s)	478, 1743
Eco130I	CCWWGG	3 cut(s)	1318, 1474, 1795
Eco147I	AGGCCT	1 cut(s)	1784
Eco24I	GRGCYC	2 cut(s)	480, 1745
Eco32I	GATATC	1 cut(s)	1905
Eco47I	GGWCC	1 cut(s)	429
Eco53kI	GAGCTC	2 cut(s)	478, 1743
Eco57I	CTGAAG	2 cut(s)	447, 1812
EcoICRI	GAGCTC	2 cut(s)	478, 1743
EcoRII	CCWGG	4 cut(s)	612, 807, 1013, 1222
EcoRV	GATATC	1 cut(s)	1905
EcoT14I	CCWWGG	3 cut(s)	1318, 1474, 1795
EcoT38I	GRGCYC	2 cut(s)	480, 1745
ErhI	CCWWGG	3 cut(s)	1318, 1474, 1795
FaeI	CATG	9 cut(s)	269, 436, 844, 988, 1180, 1406, 1511, 1799, 1813
FalI	AAGNNNNNCTT	4 cut(s)	275, 307, 670, 702
FaqI	GGGAC	2 cut(s)	825, 1653
FatI	CATG	9 cut(s)	265, 432, 840, 984, 1176, 1402, 1507, 1795, 1809
FauI	CCCGC	1 cut(s)	1518
FauNDI	CATATG	1 cut(s)	79
Fnu4HI	GCNGC	3 cut(s)	363, 471, 1554
FriOI	GRGCYC	2 cut(s)	480, 1745
Fsp4HI	GCNGC	3 cut(s)	363, 471, 1554
FspBI	CTAG	1 cut(s)	1941
GlaI	GCGC	2 cut(s)	469, 1395
GluI	GCNGC	3 cut(s)	363, 471, 1554
HaeII	RGCGCY	2 cut(s)	471, 1397
HaeIII	GGCC	3 cut(s)	110, 882, 1784
HapII	CCGG	5 cut(s)	155, 1181, 1436, 1698, 1845
HgaI	GACGC	1 cut(s)	1843
HhaI	GCGC	2 cut(s)	470, 1396
Hin1II	CATG	9 cut(s)	269, 436, 844, 988, 1180, 1406, 1511, 1799, 1813
Hin6I	GCGC	2 cut(s)	468, 1394
HinP1I	GCGC	2 cut(s)	468, 1394
HincII	GTYRAC	2 cut(s)	520, 1027
HindII	GTYRAC	2 cut(s)	520, 1027
HindIII	AAGCTT	1 cut(s)	459
HpaI	GTTAAC	1 cut(s)	1027
HpaII	CCGG	5 cut(s)	155, 1181, 1436, 1698, 1845
HphI	GGTGA	5 cut(s)	413, 535, 1586, 1592, 1712
Hpy166II	GTNNAC	9 cut(s)	289, 520, 607, 744, 756, 1027, 1452, 1711, 1852
Hpy188I	TCNGA	6 cut(s)	120, 856, 878, 1205, 1215, 1465
Hpy8I	GTNNAC	9 cut(s)	289, 520, 607, 744, 756, 1027, 1452, 1711, 1852
Hpy99I	CGWCG	1 cut(s)	1837
HpyAV	CCTTC	4 cut(s)	623, 1202, 1298, 1381
HpyCH4III	ACNGT	6 cut(s)	272, 454, 760, 794, 1232, 1242
HpyCH4IV	ACGT	6 cut(s)	351, 394, 746, 814, 1359, 1704
HpyF10VI	GCNNNNNNNGC	5 cut(s)	467, 623, 1106, 1224, 1391
HpyF3I	CTNAG	5 cut(s)	117, 826, 917, 1202, 1583
HpySE526I	ACGT	6 cut(s)	351, 394, 746, 814, 1359, 1704
Hsp92II	CATG	9 cut(s)	269, 436, 844, 988, 1180, 1406, 1511, 1799, 1813
HspAI	GCGC	2 cut(s)	468, 1394
KroI	GCCGGC	1 cut(s)	1180
KroNI	GCCGGC	1 cut(s)	1182
KspAI	GTTAAC	1 cut(s)	1027
LmnI	GCTCC	3 cut(s)	475, 1169, 1740
Lsp1109I	GCAGC	2 cut(s)	374, 457
LweI	GCATC	7 cut(s)	534, 613, 826, 1181, 1512, 1753, 1877
MaeI	CTAG	1 cut(s)	1941
MaeII	ACGT	6 cut(s)	351, 394, 746, 814, 1359, 1704
MaeIII	GTNAC	7 cut(s)	299, 347, 760, 1652, 1700, 1716, 1936
MboII	GAAGA	6 cut(s)	869, 1166, 1768, 1781, 1818, 1825
MflI	RGATCY	3 cut(s)	510, 1414, 1432
MhlI	GDGCHC	4 cut(s)	480, 609, 1338, 1745
MlsI	TGGCCA	1 cut(s)	110
MluNI	TGGCCA	1 cut(s)	110
MmeI	TCCRAC	2 cut(s)	688, 1912
Mox20I	TGGCCA	1 cut(s)	110
MroNI	GCCGGC	1 cut(s)	1180
MscI	TGGCCA	1 cut(s)	110
MseI	TTAA	5 cut(s)	161, 954, 1026, 1104, 1143
Msp20I	TGGCCA	1 cut(s)	110
MspI	CCGG	5 cut(s)	155, 1181, 1436, 1698, 1845
MspR9I	CCNGG	7 cut(s)	155, 614, 809, 1015, 1224, 1437, 1846
Mva1269I	GAATGC	2 cut(s)	539, 1837
MvaI	CCWGG	4 cut(s)	614, 809, 1015, 1224
MvnI	CGCG	1 cut(s)	1385
MwoI	GCNNNNNNNGC	5 cut(s)	467, 623, 1106, 1224, 1391
NaeI	GCCGGC	1 cut(s)	1182
NciI	CCSGG	3 cut(s)	155, 1437, 1846
NcoI	CCATGG	1 cut(s)	1795
NdeI	CATATG	1 cut(s)	79
NgoMIV	GCCGGC	1 cut(s)	1180
NlaIII	CATG	9 cut(s)	269, 436, 844, 988, 1180, 1406, 1511, 1799, 1813
NlaIV	GGNNCC	2 cut(s)	1416, 1434
NmeAIII	GCCGAG	2 cut(s)	68, 1724
NmuCI	GTSAC	3 cut(s)	299, 347, 1700
NruI	TCGCGA	1 cut(s)	1385
NspV	TTCGAA	1 cut(s)	1195
PagI	TCATGA	1 cut(s)	265
PceI	AGGCCT	1 cut(s)	1784
PctI	GAATGC	2 cut(s)	539, 1837
PdiI	GCCGGC	1 cut(s)	1182
PflMI	CCANNNNNTGG	2 cut(s)	131, 1408
PfoI	TCCNGGA	1 cut(s)	1435
PinAI	ACCGGT	1 cut(s)	1697
PkrI	GCNGC	3 cut(s)	364, 472, 1555
Ple19I	CGATCG	1 cut(s)	1468
PshBI	ATTAAT	1 cut(s)	954
PsiI	TTATAA	1 cut(s)	1092
Psp124BI	GAGCTC	2 cut(s)	480, 1745
Psp6I	CCWGG	4 cut(s)	612, 807, 1013, 1222
PspGI	CCWGG	4 cut(s)	612, 807, 1013, 1222
PspN4I	GGNNCC	2 cut(s)	1416, 1434
PspPI	GGNCC	1 cut(s)	429
PstI	CTGCAG	1 cut(s)	1725
PstNI	CAGNNNCTG	2 cut(s)	470, 833
PsuI	RGATCY	3 cut(s)	510, 1414, 1432
PvuI	CGATCG	1 cut(s)	1468
RruI	TCGCGA	1 cut(s)	1385
RsaI	GTAC	7 cut(s)	40, 340, 791, 796, 1190, 1279, 1460
RsaNI	GTAC	7 cut(s)	39, 339, 790, 795, 1189, 1278, 1459
SacI	GAGCTC	2 cut(s)	480, 1745
SaqAI	TTAA	5 cut(s)	161, 954, 1026, 1104, 1143
SatI	GCNGC	3 cut(s)	363, 471, 1554
Sau96I	GGNCC	1 cut(s)	429
ScaI	AGTACT	2 cut(s)	340, 1279
ScrFI	CCNGG	7 cut(s)	155, 614, 809, 1015, 1224, 1437, 1846
SduI	GDGCHC	4 cut(s)	480, 609, 1338, 1745
SfaNI	GCATC	7 cut(s)	534, 613, 826, 1181, 1512, 1753, 1877
SfcI	CTRYAG	1 cut(s)	1721
SfuI	TTCGAA	1 cut(s)	1195
SinI	GGWCC	1 cut(s)	429
SmlI	CTYRAG	2 cut(s)	5, 437
SmoI	CTYRAG	2 cut(s)	5, 437
SseBI	AGGCCT	1 cut(s)	1784
SsiI	CCGC	8 cut(s)	321, 473, 905, 1480, 1525, 1533, 1553, 1567
SspMI	CTAG	1 cut(s)	1941
SstI	GAGCTC	2 cut(s)	480, 1745
StuI	AGGCCT	1 cut(s)	1784
StyD4I	CCNGG	7 cut(s)	153, 612, 807, 1013, 1222, 1435, 1844
StyI	CCWWGG	3 cut(s)	1318, 1474, 1795
TaaI	ACNGT	6 cut(s)	272, 454, 760, 794, 1232, 1242
TaiI	ACGT	6 cut(s)	354, 397, 749, 817, 1362, 1707
TaqI	TCGA	6 cut(s)	574, 1195, 1311, 1374, 1468, 1779
TatI	WGTACW	4 cut(s)	38, 338, 794, 1277
TauI	GCSGC	1 cut(s)	1556
Tru1I	TTAA	5 cut(s)	161, 954, 1026, 1104, 1143
Tru9I	TTAA	5 cut(s)	161, 954, 1026, 1104, 1143
TscAI	CASTG	3 cut(s)	60, 1237, 1354
TseFI	GTSAC	3 cut(s)	299, 347, 1700
TseI	GCWGC	2 cut(s)	362, 470
Tsp45I	GTSAC	3 cut(s)	299, 347, 1700
TspDTI	ATGAA	5 cut(s)	792, 797, 1419, 1689, 1826
TspGWI	ACGGA	2 cut(s)	493, 1924
TspRI	CASTG	3 cut(s)	60, 1237, 1354
Van91I	CCANNNNNTGG	2 cut(s)	131, 1408
VneI	GTGCAC	1 cut(s)	605
VpaK11BI	GGWCC	1 cut(s)	429
VspI	ATTAAT	1 cut(s)	954
XapI	RAATTY	4 cut(s)	233, 976, 1033, 1045
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1425
XspI	CTAG	1 cut(s)	1941
ZrmI	AGTACT	2 cut(s)	340, 1279

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.