Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0000772

Physical Location & Seq

Genomic Coordinates Reverse (-)

15531749 .. 15544792

Gene Structure 13044 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g11810.t10

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1863 bp

ATGGTATGGTGTTCTGCCTGTGTCAAAAACGTTGAAGGAACCAGCGATGCTGGTAGACTATGGTGTTCCGGATGTGGCAAGGTTTTAGAGGATCACATTTTCTCTGAGGAACCCACTTTCGTCAAGAATGCCGCCGGCCAGAGCCAATTGGCTGGAAGATATGTGCGCTCCAGGGAAAGCGAAATCTCTGCTTCTCGTGAAAGGATCCTCGAAAACGCTGAATATGAATTGAGATGTATGAGGAATGCTTTAGATATGGGAGACAATGAAGAAATTATTGACATAGCTAAACGCTTTTATAGAATTGCGATTGAGCGGAATTTTACAAGGGGGCGCAAGTCAGAGCAAGTACAGGCCGCATGTCTTTACATTGCATGTCGGGAAAAGAAGAAGCCATACCTTCTCATCGATTTTTCTAACTACTTGAAGATAAATGTCTATGTGCTAGGAGCTGTGTTTTTGCAACTTTGCAAGGCTTTGAGGCTTGATGAGCACCCGATTGTTCAAAAACTTGTTGATCCTTCTTGGTTTATTCATAGGTTCACTGAGAGTTTACCCGGAGGAAGGGATAAAGGGGTTATGCAAACTGCACACCGGATTATCACAAGCATGAAACGGGATTGGATGCAGACAGGCAGAAAACCAAGTGGAATATGTGGTGCTGCATTATATATATCAGCACTTTCACATGGTCTCAAGTGCTCCAAGTCTGATATTATCAAAATTGTACATGTCTGTGATGCTACATTGACTAAGCGACTGGTTGAATTTGAGAATACAGAATCTGGGAGCTTGACGATTGAAGAGTTCCTCTTGAAGGCTAAGGAACTGGATGAAATAAGCAAACAACCAATTATGGCTGATAAAATGGATGACACAGATAGTAGCCCTTCTGAACAGAGGATCCTTTGCGAACATAAGGATAGTGGAAAACCTTATGCACATGGACTTTGTCAAATCTGTTATGATGATTTTATGACAATTTCAGGTGGACTTGACGGAGGGGCTAATCCTCCAGCTTTCCAGCGTGCTGAAATAGAGAGATTGAAAAAAACATCTGCGGAGCTAAATGCTAATGACTCTGGCATCGACACCATTGCTTCTGAAAGCCTTGACAACAGTAATCAGTTATCCCAGTTTGAGAAAGAGAATAACACAAAATCAGGAAGCAAGAACAAAGGACTGCTGCCTACGGAGCCTGTAAGTGATGGGGCTGCTATGGAGAATACAGCTGATGACATTGGAACTGAAGATTGTGATGATGAGTCTGACAACTTTTCAGATATTGATGATCTGGAGGTTGATGGCTACCTTCTTAATGAAGAGGGGCAACGCTATAAAAAGATGATTTGGGAAGAAATGAACCGTGAGTACATTGAGGAGCAAGCAGCGAAGGAGGAAGCAGCTAAGGCTGCTATGGATATCAATTGTCCAGAAGGTGCAAAGAAACTTGCACAAATTACTGAAGCAGCTGTTGCCAAGAGAAAAAAGGAGAGGCAACTAGCTAGAGCAGCTGAAGCGAAAAACTCTACTCCAGCTCAGACTGCTGCAGAAGCTGTCCACCAAATGCTGACTAAGAAGAGACTCAGCTCAAAAATCAACTTTGATGTTCTGGAGGATATGTTCGAAACATCTGAGGGTCCTGATGTCTCCAAGAAAAGAAAAATTGATTCACATCTTGACAATGACAACAAGATGCCCCATGACAGTGAAGAACTTAAATATGATGCATACAAAGATGATGATTTGGGTATGGAACAGGAATATGGGGATGAAGAAGGACTTGAAGACATAGGCTACAACAATCATGATTATGTTGAGGAAGCAGATGAGTACAATGATCGAGATTATGATGATTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000126 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0006139 GO:0006351 GO:0006352 GO:0006383 GO:0006384 GO:0006399 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009303 GO:0009304 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0018130 GO:0019438 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044798 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0090576 GO:0097659 GO:0098781 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRF1 TFIIB

Protein Analysis

621

Amino Acids

69.83

Weight (kDa)

4.83

Isoelectric Point (pI)

44.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TFIIB	PF00382	69 - 158	5.2e-16	Transcription factor TFIIB repeat
TFIIB	PF00382	169 - 259	4.5e-17	Transcription factor TFIIB repeat
BRF1	PF07741	427 - 528	1.3e-18	Brf1-like TBP-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000772)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30455 AT2G01280 AT2G01280 AT2G01280 AT2G45100 AT2G45100 AT2G45100 AT3G09360 AT3G09360 AT3G09360
fragaria_vesca	FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_7g06241
malus_domestica	MD04G1033900.v1.1
prunus_persica	Prupe.1G180700_v2.0.a1
pyrus_communis	pycom04g02830
rosa_chinensis	RchiOBHm_Chr4g0409121 RchiOBHm_Chr7g0228131
rosa_laevigata	RLG00000001586 RLG00000008590
rosa_multiflora	Rmu_sc0001348.1_g000036 Rmu_sc0001348.1_g000042 Rmu_sc0001526.1_g000006 Rmu_sc0001526.1_g000008 Rmu_sc0012031.1_g000013 Rmu_sc0021826.1_g000001 Rmu_ssc0000372.1_g000072
rosa_roxburghii	Rroxscaffold_2G00115130 Rroxscaffold_3G00231370 Rroxscaffold_5G00353680 Rroxscaffold_7G00191300
rosa_rugosa	Rorug04G0090500 Rorug04G0090600 Rorug04G0090700 Rorug07G0245700 Rorug07G0245800
rosa_samantha	Rh2AG319000 Rh4AG154400 Rh4BG152200 Rh4CG163600 Rh4CG264400 Rh4DG147400 Rh5DG375300 Rh7AG400000 Rh7BG381300 Rh7CG418200 Rh7DG396100
rosa_wichuraiana	Rw0G005090 Rw0G011060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	316
AccI	GTMKAC	1 cut(s)	55
AccIII	TCCGGA	1 cut(s)	68
AciI	CCGC	4 cut(s)	132, 316, 357, 1061
AclI	AACGTT	1 cut(s)	30
AclWI	GGATC	6 cut(s)	99, 199, 212, 512, 898, 911
AcoI	YGGCCR	1 cut(s)	136
AcsI	RAATTY	2 cut(s)	319, 767
AcuI	CTGAAG	3 cut(s)	1269, 1485, 1536
AfaI	GTAC	4 cut(s)	351, 729, 1373, 1835
AfiI	CCNNNNNNNGG	2 cut(s)	564, 817
AflIII	ACRYGT	1 cut(s)	730
AgsI	TTSAA	8 cut(s)	35, 427, 506, 767, 803, 817, 1048, 1787
AjnI	CCWGG	1 cut(s)	170
AloI	GAACNNNNNNTCC	4 cut(s)	888, 920, 1607, 1639
Alw21I	GWGCWC	2 cut(s)	495, 704
Alw26I	GTCTC	4 cut(s)	255, 698, 1576, 1654
AlwI	GGATC	6 cut(s)	99, 199, 212, 512, 898, 911
AlwNI	CAGNNNCTG	2 cut(s)	785, 1556
Aor13HI	TCCGGA	1 cut(s)	68
AoxI	GGCC	2 cut(s)	136, 354
ApeKI	GCWGC	9 cut(s)	662, 1186, 1214, 1388, 1403, 1412, 1469, 1511, 1547
ApoI	RAATTY	2 cut(s)	319, 767
AspLEI	GCGC	2 cut(s)	168, 336
AspS9I	GGNCC	1 cut(s)	1640
AsuC2I	CCSGG	1 cut(s)	558
AsuII	TTCGAA	1 cut(s)	1626
AvaII	GGWCC	1 cut(s)	1640
BamHI	GGATCC	2 cut(s)	204, 903
BarI	GAAGNNNNNNTAC	2 cut(s)	380, 412
BauI	CACGAG	1 cut(s)	195
BbsI	GAAGAC	1 cut(s)	1794
Bbv12I	GWGCWC	2 cut(s)	495, 704
BbvI	GCAGC	9 cut(s)	649, 1173, 1201, 1399, 1400, 1415, 1481, 1523, 1534
BccI	CCATC	2 cut(s)	1202, 1298
BcgI	CGANNNNNNTGC	4 cut(s)	170, 204, 1079, 1113
BciT130I	CCWGG	1 cut(s)	172
BcnI	CCSGG	1 cut(s)	558
BcoDI	GTCTC	4 cut(s)	255, 698, 1576, 1654
BfaI	CTAG	3 cut(s)	446, 1502, 1506
BfmI	CTRYAG	1 cut(s)	1548
Bme1390I	CCNGG	2 cut(s)	172, 558
Bme18I	GGWCC	1 cut(s)	1640
BmgT120I	GGNCC	1 cut(s)	1640
BmiI	GGNNCC	6 cut(s)	40, 111, 206, 905, 1197, 1641
BmrFI	CCNGG	2 cut(s)	172, 558
BmrI	ACTGGG	1 cut(s)	1129
BmsI	GCATC	6 cut(s)	37, 615, 730, 1095, 1686, 1717
BmuI	ACTGGG	1 cut(s)	1129
BpiI	GAAGAC	1 cut(s)	1794
BpmI	CTGGAG	5 cut(s)	154, 999, 1316, 1518, 1634
Bpu10I	CCTNAGC	2 cut(s)	822, 1407
Bpu14I	TTCGAA	1 cut(s)	1626
BpuEI	CTTGAG	1 cut(s)	680
BpuMI	CCSGG	1 cut(s)	558
Bsa29I	ATCGAT	1 cut(s)	408
BsaBI	GATNNNNATC	1 cut(s)	1674
BsaI	GGTCTC	1 cut(s)	698
BsaJI	CCNNGG	1 cut(s)	171
BsaWI	WCCGGW	2 cut(s)	68, 594
BsaXI	ACNNNNNCTCC	2 cut(s)	1607, 1637
Bsc4I	CCNNNNNNNGG	2 cut(s)	564, 817
Bse118I	RCCGGY	1 cut(s)	134
Bse1I	ACTGG	3 cut(s)	765, 834, 1135
Bse3DI	GCAATG	2 cut(s)	369, 1095
Bse8I	GATNNNNATC	1 cut(s)	1674
BseAI	TCCGGA	1 cut(s)	68
BseBI	CCWGG	1 cut(s)	172
BseCI	ATCGAT	1 cut(s)	408
BseDI	CCNNGG	1 cut(s)	171
BseGI	GGATG	5 cut(s)	77, 630, 838, 877, 1777
BseJI	GATNNNNATC	1 cut(s)	1674
BseLI	CCNNNNNNNGG	2 cut(s)	564, 817
BseMI	GCAATG	2 cut(s)	369, 1095
BseMII	CTCAG	5 cut(s)	96, 537, 1553, 1600, 1626
BseNI	ACTGG	3 cut(s)	765, 834, 1135
BseRI	GAGGAG	1 cut(s)	1394
BseXI	GCAGC	9 cut(s)	649, 1173, 1201, 1399, 1400, 1415, 1481, 1523, 1534
BsgI	GTGCAG	1 cut(s)	573
BshFI	GGCC	2 cut(s)	138, 356
BshVI	ATCGAT	1 cut(s)	408
BsiHKAI	GWGCWC	2 cut(s)	495, 704
BsiSI	CCGG	4 cut(s)	69, 135, 558, 595
BslI	CCNNNNNNNGG	2 cut(s)	564, 817
BsmAI	GTCTC	4 cut(s)	255, 698, 1576, 1654
BsmI	GAATGC	2 cut(s)	133, 250
BsnI	GGCC	2 cut(s)	138, 356
Bso31I	GGTCTC	1 cut(s)	698
Bsp119I	TTCGAA	1 cut(s)	1626
Bsp1286I	GDGCHC	2 cut(s)	495, 704
Bsp13I	TCCGGA	1 cut(s)	68
Bsp1407I	TGTACA	1 cut(s)	727
Bsp143I	GATC	6 cut(s)	91, 204, 517, 903, 1291, 1840
BspACI	CCGC	4 cut(s)	132, 316, 357, 1061
BspANI	GGCC	2 cut(s)	138, 356
BspCNI	CTCAG	5 cut(s)	97, 538, 1552, 1599, 1627
BspDI	ATCGAT	1 cut(s)	408
BspEI	TCCGGA	1 cut(s)	68
BspHI	TCATGA	1 cut(s)	1807
BspLI	GGNNCC	6 cut(s)	40, 111, 206, 905, 1197, 1641
BspMAI	CTGCAG	1 cut(s)	1552
BspPI	GGATC	6 cut(s)	99, 199, 212, 512, 898, 911
BspT104I	TTCGAA	1 cut(s)	1626
BspTNI	GGTCTC	1 cut(s)	698
BsrBI	CCGCTC	1 cut(s)	316
BsrDI	GCAATG	2 cut(s)	369, 1095
BsrFI	RCCGGY	1 cut(s)	134
BsrGI	TGTACA	1 cut(s)	727
BsrI	ACTGG	3 cut(s)	765, 834, 1135
BssAI	RCCGGY	1 cut(s)	134
BssECI	CCNNGG	1 cut(s)	171
BssMI	GATC	6 cut(s)	91, 204, 517, 903, 1291, 1840
BssSI	CACGAG	1 cut(s)	195
Bst2BI	CACGAG	1 cut(s)	195
Bst2UI	CCWGG	1 cut(s)	172
Bst4CI	ACNGT	3 cut(s)	1121, 1367, 1709
Bst6I	CTCTTC	3 cut(s)	798, 1317, 1574
BstAPI	GCANNNNNTGC	1 cut(s)	1475
BstAUI	TGTACA	1 cut(s)	727
BstBI	TTCGAA	1 cut(s)	1626
BstC8I	GCNNGC	3 cut(s)	136, 1029, 1386
BstDEI	CTNAG	9 cut(s)	105, 546, 753, 822, 1407, 1539, 1575, 1586, 1635
BstENI	CCTNNNNNAGG	1 cut(s)	815
BstF5I	GGATG	5 cut(s)	77, 630, 838, 877, 1777
BstHHI	GCGC	2 cut(s)	168, 336
BstKTI	GATC	6 cut(s)	94, 207, 520, 906, 1294, 1843
BstMAI	GTCTC	4 cut(s)	255, 698, 1576, 1654
BstMBI	GATC	6 cut(s)	91, 204, 517, 903, 1291, 1840
BstMWI	GCNNNNNNNGC	9 cut(s)	490, 1195, 1409, 1412, 1475, 1511, 1517, 1544, 1553
BstNI	CCWGG	1 cut(s)	172
BstNSI	RCATGY	3 cut(s)	363, 378, 734
BstSCI	CCNGG	2 cut(s)	170, 556
BstSFI	CTRYAG	1 cut(s)	1548
BstV1I	GCAGC	9 cut(s)	649, 1173, 1201, 1399, 1400, 1415, 1481, 1523, 1534
BstV2I	GAAGAC	1 cut(s)	1794
BstX2I	RGATCY	2 cut(s)	204, 903
BstXI	CCANNNNNNTGG	1 cut(s)	152
BstYI	RGATCY	2 cut(s)	204, 903
Bsu15I	ATCGAT	1 cut(s)	408
BsuRI	GGCC	2 cut(s)	138, 356
BsuTUI	ATCGAT	1 cut(s)	408
BtgZI	GCGATG	1 cut(s)	60
BtsCI	GGATG	5 cut(s)	77, 630, 838, 877, 1777
BtsIMutI	CAGTG	2 cut(s)	543, 1714
Cac8I	GCNNGC	3 cut(s)	136, 1029, 1386
CaiI	CAGNNNCTG	2 cut(s)	785, 1556
CciI	TCATGA	1 cut(s)	1807
CfoI	GCGC	2 cut(s)	168, 336
Cfr10I	RCCGGY	1 cut(s)	134
Cfr13I	GGNCC	1 cut(s)	1640
ClaI	ATCGAT	1 cut(s)	408
Csp6I	GTAC	4 cut(s)	350, 728, 1372, 1834
CviAII	CATG	8 cut(s)	360, 375, 610, 689, 731, 944, 1703, 1808
CviQI	GTAC	4 cut(s)	350, 728, 1372, 1834
DdeI	CTNAG	9 cut(s)	105, 546, 753, 822, 1407, 1539, 1575, 1586, 1635
DpnI	GATC	6 cut(s)	93, 206, 519, 905, 1293, 1842
DpnII	GATC	6 cut(s)	91, 204, 517, 903, 1291, 1840
EaeI	YGGCCR	1 cut(s)	136
Eam1104I	CTCTTC	3 cut(s)	798, 1317, 1574
EarI	CTCTTC	3 cut(s)	798, 1317, 1574
Eco31I	GGTCTC	1 cut(s)	698
Eco32I	GATATC	1 cut(s)	1423
Eco47I	GGWCC	1 cut(s)	1640
Eco57I	CTGAAG	3 cut(s)	1269, 1485, 1536
EcoNI	CCTNNNNNAGG	1 cut(s)	815
EcoO109I	RGGNCCY	1 cut(s)	1640
EcoRII	CCWGG	1 cut(s)	170
EcoRV	GATATC	1 cut(s)	1423
EcoT22I	ATGCAT	1 cut(s)	1732
FaeI	CATG	8 cut(s)	363, 378, 613, 692, 734, 947, 1706, 1811
FalI	AAGNNNNNCTT	2 cut(s)	1767, 1799
FatI	CATG	8 cut(s)	359, 374, 609, 688, 730, 943, 1702, 1807
FblI	GTMKAC	1 cut(s)	55
FokI	GGATG	5 cut(s)	84, 637, 845, 884, 1784
FspBI	CTAG	3 cut(s)	446, 1502, 1506
GlaI	GCGC	2 cut(s)	167, 335
GsuI	CTGGAG	5 cut(s)	154, 999, 1316, 1518, 1634
HaeIII	GGCC	2 cut(s)	138, 356
HapII	CCGG	4 cut(s)	69, 135, 558, 595
HhaI	GCGC	2 cut(s)	168, 336
Hin1II	CATG	8 cut(s)	363, 378, 613, 692, 734, 947, 1706, 1811
Hin6I	GCGC	2 cut(s)	166, 334
HinP1I	GCGC	2 cut(s)	166, 334
HinfI	GANTC	5 cut(s)	782, 1079, 1265, 1584, 1670
HpaII	CCGG	4 cut(s)	69, 135, 558, 595
Hpy166II	GTNNAC	5 cut(s)	56, 543, 554, 992, 1561
Hpy8I	GTNNAC	5 cut(s)	56, 543, 554, 992, 1561
HpyCH4III	ACNGT	3 cut(s)	1121, 1367, 1709
HpyCH4IV	ACGT	1 cut(s)	30
HpyF10VI	GCNNNNNNNGC	9 cut(s)	490, 1195, 1409, 1412, 1475, 1511, 1517, 1544, 1553
HpyF3I	CTNAG	9 cut(s)	105, 546, 753, 822, 1407, 1539, 1575, 1586, 1635
HpySE526I	ACGT	1 cut(s)	30
Hsp92II	CATG	8 cut(s)	363, 378, 613, 692, 734, 947, 1706, 1811
HspAI	GCGC	2 cut(s)	166, 334
Kpn2I	TCCGGA	1 cut(s)	68
KroI	GCCGGC	1 cut(s)	134
KroNI	GCCGGC	1 cut(s)	136
Kzo9I	GATC	6 cut(s)	91, 204, 517, 903, 1291, 1840
LmnI	GCTCC	7 cut(s)	173, 449, 707, 789, 1063, 1195, 1381
Lsp1109I	GCAGC	9 cut(s)	649, 1173, 1201, 1399, 1400, 1415, 1481, 1523, 1534
LweI	GCATC	6 cut(s)	37, 615, 730, 1095, 1686, 1717
MaeI	CTAG	3 cut(s)	446, 1502, 1506
MaeII	ACGT	1 cut(s)	30
MalI	GATC	6 cut(s)	93, 206, 519, 905, 1293, 1842
MbiI	CCGCTC	1 cut(s)	316
MboI	GATC	6 cut(s)	91, 204, 517, 903, 1291, 1840
MfeI	CAATTG	2 cut(s)	146, 1426
MflI	RGATCY	2 cut(s)	204, 903
MhlI	GDGCHC	2 cut(s)	495, 704
MlyI	GAGTC	3 cut(s)	1073, 1274, 1578
Mph1103I	ATGCAT	1 cut(s)	1732
MroI	TCCGGA	1 cut(s)	68
MroNI	GCCGGC	1 cut(s)	134
MseI	TTAA	2 cut(s)	1317, 1719
MslI	CAYNNNNRTG	4 cut(s)	608, 735, 1707, 1812
MspA1I	CMGCKG	3 cut(s)	1232, 1472, 1514
MspI	CCGG	4 cut(s)	69, 135, 558, 595
MspR9I	CCNGG	2 cut(s)	172, 558
MunI	CAATTG	2 cut(s)	146, 1426
Mva1269I	GAATGC	2 cut(s)	133, 250
MvaI	CCWGG	1 cut(s)	172
MwoI	GCNNNNNNNGC	9 cut(s)	490, 1195, 1409, 1412, 1475, 1511, 1517, 1544, 1553
NaeI	GCCGGC	1 cut(s)	136
NciI	CCSGG	1 cut(s)	558
NdeII	GATC	6 cut(s)	91, 204, 517, 903, 1291, 1840
NgoMIV	GCCGGC	1 cut(s)	134
NlaIII	CATG	8 cut(s)	363, 378, 613, 692, 734, 947, 1706, 1811
NlaIV	GGNNCC	6 cut(s)	40, 111, 206, 905, 1197, 1641
NsiI	ATGCAT	1 cut(s)	1732
NspI	RCATGY	3 cut(s)	363, 378, 734
NspV	TTCGAA	1 cut(s)	1626
PagI	TCATGA	1 cut(s)	1807
PciI	ACATGT	1 cut(s)	730
PctI	GAATGC	2 cut(s)	133, 250
PdiI	GCCGGC	1 cut(s)	136
PfeI	GAWTC	2 cut(s)	782, 1670
PflFI	GACNNNGTC	1 cut(s)	951
PleI	GAGTC	3 cut(s)	1073, 1273, 1578
PpsI	GAGTC	3 cut(s)	1073, 1273, 1578
PpuMI	RGGWCCY	1 cut(s)	1640
PscI	ACATGT	1 cut(s)	730
Psp1406I	AACGTT	1 cut(s)	30
Psp5II	RGGWCCY	1 cut(s)	1640
Psp6I	CCWGG	1 cut(s)	170
PspGI	CCWGG	1 cut(s)	170
PspN4I	GGNNCC	6 cut(s)	40, 111, 206, 905, 1197, 1641
PspPI	GGNCC	1 cut(s)	1640
PspPPI	RGGWCCY	1 cut(s)	1640
PsrI	GAACNNNNNNTAC	2 cut(s)	1355, 1387
PstI	CTGCAG	1 cut(s)	1552
PstNI	CAGNNNCTG	2 cut(s)	785, 1556
PsuI	RGATCY	2 cut(s)	204, 903
PsyI	GACNNNGTC	1 cut(s)	951
PvuII	CAGCTG	3 cut(s)	1232, 1472, 1514
RsaI	GTAC	4 cut(s)	351, 729, 1373, 1835
RsaNI	GTAC	4 cut(s)	350, 728, 1372, 1834
RseI	CAYNNNNRTG	4 cut(s)	608, 735, 1707, 1812
SaqAI	TTAA	2 cut(s)	1317, 1719
Sau3AI	GATC	6 cut(s)	91, 204, 517, 903, 1291, 1840
Sau96I	GGNCC	1 cut(s)	1640
SchI	GAGTC	3 cut(s)	1073, 1274, 1578
ScrFI	CCNGG	2 cut(s)	172, 558
SduI	GDGCHC	2 cut(s)	495, 704
SfaNI	GCATC	6 cut(s)	37, 615, 730, 1095, 1686, 1717
SfcI	CTRYAG	1 cut(s)	1548
SfuI	TTCGAA	1 cut(s)	1626
SinI	GGWCC	1 cut(s)	1640
SmiMI	CAYNNNNRTG	4 cut(s)	608, 735, 1707, 1812
SmlI	CTYRAG	1 cut(s)	695
SmoI	CTYRAG	1 cut(s)	695
SsiI	CCGC	4 cut(s)	132, 316, 357, 1061
SspMI	CTAG	3 cut(s)	446, 1502, 1506
StyD4I	CCNGG	2 cut(s)	170, 556
TaaI	ACNGT	3 cut(s)	1121, 1367, 1709
TaiI	ACGT	1 cut(s)	33
TaqI	TCGA	5 cut(s)	210, 408, 1089, 1626, 1843
TatI	WGTACW	4 cut(s)	349, 727, 1371, 1833
TauI	GCSGC	2 cut(s)	134, 359
TfiI	GAWTC	2 cut(s)	782, 1670
Tru1I	TTAA	2 cut(s)	1317, 1719
Tru9I	TTAA	2 cut(s)	1317, 1719
TscAI	CASTG	2 cut(s)	550, 1714
TseI	GCWGC	9 cut(s)	662, 1186, 1214, 1388, 1403, 1412, 1469, 1511, 1547
TspDTI	ATGAA	8 cut(s)	240, 282, 524, 626, 849, 1335, 1376, 1788
TspGWI	ACGGA	2 cut(s)	1014, 1208
TspRI	CASTG	2 cut(s)	550, 1714
Tth111I	GACNNNGTC	1 cut(s)	951
VpaK11BI	GGWCC	1 cut(s)	1640
XagI	CCTNNNNNAGG	1 cut(s)	815
XapI	RAATTY	2 cut(s)	319, 767
XceI	RCATGY	3 cut(s)	363, 378, 734
XmiI	GTMKAC	1 cut(s)	55
XspI	CTAG	3 cut(s)	446, 1502, 1506
Zsp2I	ATGCAT	1 cut(s)	1732

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.