Transcription factor IIIB
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 351 |
| AcsI | RAATTY | 2 cut(s) | 188, 245 |
| AfaI | GTAC | 1 cut(s) | 359 |
| AgsI | TTSAA | 4 cut(s) | 125, 245, 311, 325 |
| AluBI | AGCT | 2 cut(s) | 92, 241 |
| AluI | AGCT | 2 cut(s) | 92, 241 |
| Alw26I | GTCTC | 3 cut(s) | 29, 32, 178 |
| ApoI | RAATTY | 2 cut(s) | 188, 245 |
| AspLEI | GCGC | 1 cut(s) | 47 |
| BcoDI | GTCTC | 3 cut(s) | 29, 32, 178 |
| BfaI | CTAG | 1 cut(s) | 42 |
| BmiI | GGNNCC | 1 cut(s) | 165 |
| BmsI | GCATC | 2 cut(s) | 210, 241 |
| BsaBI | GATNNNNATC | 1 cut(s) | 198 |
| BsaI | GGTCTC | 1 cut(s) | 29 |
| Bse8I | GATNNNNATC | 1 cut(s) | 198 |
| BseGI | GGATG | 2 cut(s) | 87, 301 |
| BseJI | GATNNNNATC | 1 cut(s) | 198 |
| BsmAI | GTCTC | 3 cut(s) | 29, 32, 178 |
| BsmI | GAATGC | 1 cut(s) | 139 |
| Bso31I | GGTCTC | 1 cut(s) | 29 |
| Bsp143I | GATC | 1 cut(s) | 364 |
| BspLI | GGNNCC | 1 cut(s) | 165 |
| BspQI | GCTCTTC | 1 cut(s) | 231 |
| BspTNI | GGTCTC | 1 cut(s) | 29 |
| BssMI | GATC | 1 cut(s) | 364 |
| Bst4CI | ACNGT | 3 cut(s) | 70, 233, 335 |
| Bst6I | CTCTTC | 1 cut(s) | 231 |
| BstF5I | GGATG | 2 cut(s) | 87, 301 |
| BstHHI | GCGC | 1 cut(s) | 47 |
| BstKTI | GATC | 1 cut(s) | 367 |
| BstMAI | GTCTC | 3 cut(s) | 29, 32, 178 |
| BstMBI | GATC | 1 cut(s) | 364 |
| BtsCI | GGATG | 2 cut(s) | 87, 301 |
| BtsIMutI | CAGTG | 1 cut(s) | 238 |
| CfoI | GCGC | 1 cut(s) | 47 |
| Csp6I | GTAC | 1 cut(s) | 358 |
| CviAII | CATG | 3 cut(s) | 138, 227, 284 |
| CviJI | RGCY | 4 cut(s) | 92, 164, 241, 321 |
| CviKI_1 | RGCY | 4 cut(s) | 92, 164, 241, 321 |
| CviQI | GTAC | 1 cut(s) | 358 |
| DpnI | GATC | 1 cut(s) | 366 |
| DpnII | GATC | 1 cut(s) | 364 |
| Eam1104I | CTCTTC | 1 cut(s) | 231 |
| EarI | CTCTTC | 1 cut(s) | 231 |
| Eco31I | GGTCTC | 1 cut(s) | 29 |
| EcoT22I | ATGCAT | 2 cut(s) | 139, 256 |
| FaeI | CATG | 3 cut(s) | 141, 230, 287 |
| FatI | CATG | 3 cut(s) | 137, 226, 283 |
| FauNDI | CATATG | 1 cut(s) | 33 |
| FblI | GTMKAC | 1 cut(s) | 351 |
| FokI | GGATG | 2 cut(s) | 94, 308 |
| FspBI | CTAG | 1 cut(s) | 42 |
| GlaI | GCGC | 1 cut(s) | 46 |
| HhaI | GCGC | 1 cut(s) | 47 |
| Hin1II | CATG | 3 cut(s) | 141, 230, 287 |
| Hin6I | GCGC | 1 cut(s) | 45 |
| HinP1I | GCGC | 1 cut(s) | 45 |
| HinfI | GANTC | 2 cut(s) | 4, 194 |
| Hpy166II | GTNNAC | 1 cut(s) | 352 |
| Hpy188I | TCNGA | 2 cut(s) | 11, 386 |
| Hpy188III | TCNNGA | 4 cut(s) | 79, 167, 203, 368 |
| Hpy8I | GTNNAC | 1 cut(s) | 352 |
| HpyAV | CCTTC | 2 cut(s) | 296, 305 |
| HpyCH4III | ACNGT | 3 cut(s) | 70, 233, 335 |
| HpyCH4V | TGCA | 2 cut(s) | 137, 254 |
| Hsp92II | CATG | 3 cut(s) | 141, 230, 287 |
| HspAI | GCGC | 1 cut(s) | 45 |
| Kzo9I | GATC | 1 cut(s) | 364 |
| LguI | GCTCTTC | 1 cut(s) | 231 |
| LmnI | GCTCC | 1 cut(s) | 169 |
| LpnPI | CCDG | 3 cut(s) | 180, 191, 303 |
| LweI | GCATC | 2 cut(s) | 210, 241 |
| MaeI | CTAG | 1 cut(s) | 42 |
| MalI | GATC | 1 cut(s) | 366 |
| MboI | GATC | 1 cut(s) | 364 |
| MboII | GAAGA | 3 cut(s) | 113, 248, 311 |
| MluCI | AATT | 4 cut(s) | 188, 245, 306, 328 |
| MnlI | CCTC | 2 cut(s) | 145, 154 |
| Mph1103I | ATGCAT | 2 cut(s) | 139, 256 |
| MslI | CAYNNNNRTG | 2 cut(s) | 231, 288 |
| MspA1I | CMGCKG | 1 cut(s) | 92 |
| Mva1269I | GAATGC | 1 cut(s) | 139 |
| NdeI | CATATG | 1 cut(s) | 33 |
| NdeII | GATC | 1 cut(s) | 364 |
| NlaIII | CATG | 3 cut(s) | 141, 230, 287 |
| NlaIV | GGNNCC | 1 cut(s) | 165 |
| NsiI | ATGCAT | 2 cut(s) | 139, 256 |
| PciSI | GCTCTTC | 1 cut(s) | 231 |
| PctI | GAATGC | 1 cut(s) | 139 |
| PfeI | GAWTC | 2 cut(s) | 4, 194 |
| PspN4I | GGNNCC | 1 cut(s) | 165 |
| PvuII | CAGCTG | 1 cut(s) | 92 |
| RsaI | GTAC | 1 cut(s) | 359 |
| RsaNI | GTAC | 1 cut(s) | 358 |
| RseI | CAYNNNNRTG | 2 cut(s) | 231, 288 |
| SapI | GCTCTTC | 1 cut(s) | 231 |
| Sau3AI | GATC | 1 cut(s) | 364 |
| SetI | ASST | 2 cut(s) | 94, 243 |
| SfaNI | GCATC | 2 cut(s) | 210, 241 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 231, 288 |
| Sse9I | AATT | 4 cut(s) | 188, 245, 306, 328 |
| SspMI | CTAG | 1 cut(s) | 42 |
| TaaI | ACNGT | 3 cut(s) | 70, 233, 335 |
| TasI | AATT | 4 cut(s) | 188, 245, 306, 328 |
| TatI | WGTACW | 1 cut(s) | 357 |
| TfiI | GAWTC | 2 cut(s) | 4, 194 |
| TscAI | CASTG | 1 cut(s) | 238 |
| TspDTI | ATGAA | 5 cut(s) | 98, 146, 300, 312, 360 |
| TspRI | CASTG | 1 cut(s) | 238 |
| XapI | RAATTY | 2 cut(s) | 188, 245 |
| XmiI | GTMKAC | 1 cut(s) | 351 |
| XspI | CTAG | 1 cut(s) | 42 |
| Zsp2I | ATGCAT | 2 cut(s) | 139, 256 |