Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0000772

Physical Location & Seq

Genomic Coordinates Reverse (-)

35933298 .. 35955411

Gene Structure 22114 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG163600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1740 bp

ATGCGAAGCAATTGGGAATTTAGGGTTGAAGCTTACGACAACTCGTGTTTCCTATTTAAGTCGTTAGACAATTCAGGTTGGGTCGGACAATACGCCGAATATGAATTGAGATGTATGAGAAATGCTTTAGATATGGGAGACAACGAAGAAATTATTGACATAGCTAAACGCTTTTATAGAATTGCAATTGAGCGGAATTTCACAAGGGGCCGTAAGTCAGAGCAAGTACAGGCTGCATGTCTTTACATTGCATGTCGGGAAAAGAAGAAGCCATATCTTCTCATTGATTTTTCGAACTACTTGAAGATAAATATCTATGTGCTGGGAGCTGTGTTTTTGCAACTTTGCAAGGCTCTGAGGCTTGATGAGCACCCAATTGTTCAAAAACTTGTTGATCCTTCCTGGTTTATTCATAGATTTGCTGAGAGTTTACCAGGAGGAAGGGATAAAGGGGTTATGCAAACTGCACAAAGGATTATCACAAGCATGAAACGGGATTGGATGCAGACAGGCAGAAAACCCAGTGGACTATGTGGTGCTGCATTATATATATCAGCACTTTCACACGGTCTCAAGTGCTCCAAATCTGATATTATCAAAATTGTACATGTTTGTGATGCTACATTGACCAAGCGGCTGGTTGAATTTGAGAATACAGAATCTGGGAGCTTGACGATTGAAGAGTTCCTCGTGAAGGCAAAGGAACAGGATGAATTAAGCAAACAACCAATTATGGCTGATAAAATGGATAATACAGATGGTGGCCTTTGTGAACACAAGATCCTTTGTGAACATAAGGATAGTGAAAAACCTTTTGCGTATGGACTTTGTCAAACCTGTTATGATGATTTTATGACAATTTCAGGTGGACTTGACGGAGGATCTAATCCTCCTGCTTTCCAGCGTGCTGAAATAGAGAGATTGAAAAAAGCATCTGCGGAGCTTAATGCTAATGACTCTGGCATCGATACCATTGCTTGTCAAAGCCTTGACAACAGTGATCAGTCATCCAAGTTTGAGAAAGAGAACAACACAAAATCAGGAAGTGAGAATAAAGGACTGCTGCTTATGGAGCCTGAAAGTGATGGGGCTGCTATGGAGAATACAGCTGTTGAGACCGGAACTGAAGCTTGTGATGATGAGTCTGACAACTTTTCAGATATTGATGATCTGGAGGTTGACGGCTACCTTCTTAATGAAGAGGGGAAACGCTACAAAAAGATGATTTGGGAAGAAATGAATCGTGAGTACATTGAGGAGCAAGCAGCGAAGGAGGAAGCAGCTAAGGCTGCTATGGATATCAATTGTCCAGAAGGTGCAAAGAAACTTGCGCAAAATACTGAAGCAGCTGTTGCCAAGAGAAAAAAGGAGAGGCAACTAGCTAGAGCAGCTGAAGCGAAAAACTCTACTCCAGCTCAGACTGCTGCAGAAGCTGTCCACCAAATGCTAACTAAGAAGAGACTCAGCTCAAAAATCAACTTTGATGTTCTGGAGAATATGTTCGAAACATCTGAGGCTCCTGATGTCTCCCAGAAAAGAAAATTTGATTCACATCTTGACAATGACGACAAGATGCCCCATGACAGTGAAGAGCTTGAATTTGATGCATACAAAGATGATGACTTGGGTATGGAACATGAGTATGGGGATGAAGAAGGAATTGAAGGAACAGGCTTCAACAATTATGGTTATGTTGATGAAGTAGACGAGTACAATGATCGTGATTATGATGATTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000126 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0006139 GO:0006351 GO:0006352 GO:0006383 GO:0006384 GO:0006399 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009303 GO:0009304 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0018130 GO:0019438 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044798 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0090576 GO:0097659 GO:0098781 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRF1 TFIIB

Protein Analysis

579

Amino Acids

65.56

Weight (kDa)

4.76

Isoelectric Point (pI)

41.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TFIIB	PF00382	36 - 117	1.5e-14	Transcription factor TFIIB repeat
TFIIB	PF00382	128 - 218	1.9e-17	Transcription factor TFIIB repeat
BRF1	PF07741	386 - 502	4.3e-25	Brf1-like TBP-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000772)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30455 AT2G01280 AT2G01280 AT2G01280 AT2G45100 AT2G45100 AT2G45100 AT3G09360 AT3G09360 AT3G09360
fragaria_vesca	FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_7g06241
malus_domestica	MD04G1033900.v1.1
prunus_persica	Prupe.1G180700_v2.0.a1
pyrus_communis	pycom04g02830
rosa_chinensis	RchiOBHm_Chr4g0409121 RchiOBHm_Chr7g0228131
rosa_laevigata	RLG00000001586 RLG00000008590
rosa_multiflora	Rmu_sc0001348.1_g000036 Rmu_sc0001348.1_g000042 Rmu_sc0001526.1_g000006 Rmu_sc0001526.1_g000008 Rmu_sc0012031.1_g000013 Rmu_sc0021826.1_g000001 Rmu_ssc0000372.1_g000072
rosa_roxburghii	Rroxscaffold_2G00115130 Rroxscaffold_3G00231370 Rroxscaffold_5G00353680 Rroxscaffold_7G00191300
rosa_rugosa	Rorug04G0090500 Rorug04G0090600 Rorug04G0090700 Rorug07G0245700 Rorug07G0245800
rosa_samantha	Rh2AG319000 Rh4AG154400 Rh4BG152200 Rh4CG163600 Rh4CG264400 Rh4DG147400 Rh5DG375300 Rh7AG400000 Rh7BG381300 Rh7CG418200 Rh7DG396100
rosa_wichuraiana	Rw0G005090 Rw0G011060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1332
AccBSI	CCGCTC	1 cut(s)	193
AccI	GTMKAC	1 cut(s)	1704
AciI	CCGC	3 cut(s)	193, 634, 938
AclWI	GGATC	3 cut(s)	389, 775, 889
AcsI	RAATTY	5 cut(s)	17, 196, 644, 1541, 1598
AcuI	CTGAAG	3 cut(s)	1146, 1362, 1413
AfaI	GTAC	4 cut(s)	228, 606, 1250, 1712
AfiI	CCNNNNNNNGG	1 cut(s)	694
AflIII	ACRYGT	1 cut(s)	607
AgsI	TTSAA	9 cut(s)	29, 304, 383, 644, 680, 925, 1598, 1664, 1678
AjnI	CCWGG	2 cut(s)	401, 433
AloI	GAACNNNNNNTCC	4 cut(s)	765, 797, 1484, 1516
Alw21I	GWGCWC	2 cut(s)	372, 581
Alw26I	GTCTC	5 cut(s)	132, 575, 1109, 1453, 1531
AlwI	GGATC	3 cut(s)	389, 775, 889
AlwNI	CAGNNNCTG	2 cut(s)	662, 1433
AoxI	GGCC	2 cut(s)	208, 763
ApoI	RAATTY	5 cut(s)	17, 196, 644, 1541, 1598
Asp700I	GAANNNNTTC	1 cut(s)	1499
AspLEI	GCGC	1 cut(s)	1333
AspS9I	GGNCC	1 cut(s)	208
AsuII	TTCGAA	2 cut(s)	293, 1503
BauI	CACGAG	2 cut(s)	43, 689
Bbv12I	GWGCWC	2 cut(s)	372, 581
BccI	CCATC	2 cut(s)	752, 1079
BceAI	ACGGC	2 cut(s)	195, 1198
BcgI	CGANNNNNNTGC	2 cut(s)	956, 990
BciT130I	CCWGG	2 cut(s)	403, 435
BclI	TGATCA	1 cut(s)	1000
BcoDI	GTCTC	5 cut(s)	132, 575, 1109, 1453, 1531
BfaI	CTAG	2 cut(s)	1379, 1383
BfmI	CTRYAG	1 cut(s)	1425
Bme1390I	CCNGG	2 cut(s)	403, 435
BmgT120I	GGNCC	1 cut(s)	208
BmiI	GGNNCC	3 cut(s)	209, 1074, 1518
BmrFI	CCNGG	2 cut(s)	403, 435
BmrI	ACTGGG	1 cut(s)	516
BmsI	GCATC	6 cut(s)	492, 607, 941, 972, 1563, 1594
BmuI	ACTGGG	1 cut(s)	516
BpmI	CTGGAG	3 cut(s)	1193, 1395, 1511
Bpu10I	CCTNAGC	1 cut(s)	1284
Bpu14I	TTCGAA	2 cut(s)	293, 1503
BpuEI	CTTGAG	1 cut(s)	557
Bsa29I	ATCGAT	1 cut(s)	966
BsaBI	GATNNNNATC	2 cut(s)	311, 1551
BsaI	GGTCTC	2 cut(s)	575, 1109
BsaWI	WCCGGW	1 cut(s)	1118
BsaXI	ACNNNNNCTCC	2 cut(s)	1484, 1514
Bsc4I	CCNNNNNNNGG	1 cut(s)	694
Bse1I	ACTGG	1 cut(s)	522
Bse3DI	GCAATG	2 cut(s)	246, 972
Bse8I	GATNNNNATC	2 cut(s)	311, 1551
BseBI	CCWGG	2 cut(s)	403, 435
BseCI	ATCGAT	1 cut(s)	966
BseGI	GGATG	4 cut(s)	507, 715, 1007, 1654
BseJI	GATNNNNATC	2 cut(s)	311, 1551
BseLI	CCNNNNNNNGG	1 cut(s)	694
BseMI	GCAATG	2 cut(s)	246, 972
BseMII	CTCAG	5 cut(s)	347, 414, 1430, 1477, 1503
BseNI	ACTGG	1 cut(s)	522
BseRI	GAGGAG	1 cut(s)	1271
BseYI	CCCAGC	1 cut(s)	322
BsgI	GTGCAG	1 cut(s)	450
BshFI	GGCC	2 cut(s)	210, 765
BshVI	ATCGAT	1 cut(s)	966
BsiHKAI	GWGCWC	2 cut(s)	372, 581
BsiSI	CCGG	1 cut(s)	1119
BslI	CCNNNNNNNGG	1 cut(s)	694
BsmAI	GTCTC	5 cut(s)	132, 575, 1109, 1453, 1531
BsnI	GGCC	2 cut(s)	210, 765
Bso31I	GGTCTC	2 cut(s)	575, 1109
Bsp119I	TTCGAA	2 cut(s)	293, 1503
Bsp1286I	GDGCHC	2 cut(s)	372, 581
Bsp1407I	TGTACA	1 cut(s)	604
Bsp143I	GATC	6 cut(s)	394, 780, 881, 1000, 1168, 1717
BspACI	CCGC	3 cut(s)	193, 634, 938
BspANI	GGCC	2 cut(s)	210, 765
BspCNI	CTCAG	5 cut(s)	348, 415, 1429, 1476, 1504
BspDI	ATCGAT	1 cut(s)	966
BspLI	GGNNCC	3 cut(s)	209, 1074, 1518
BspMAI	CTGCAG	1 cut(s)	1429
BspPI	GGATC	3 cut(s)	389, 775, 889
BspQI	GCTCTTC	1 cut(s)	1584
BspT104I	TTCGAA	2 cut(s)	293, 1503
BspTNI	GGTCTC	2 cut(s)	575, 1109
BsrBI	CCGCTC	1 cut(s)	193
BsrDI	GCAATG	2 cut(s)	246, 972
BsrGI	TGTACA	1 cut(s)	604
BsrI	ACTGG	1 cut(s)	522
BssMI	GATC	6 cut(s)	394, 780, 881, 1000, 1168, 1717
BssSI	CACGAG	2 cut(s)	43, 689
Bst2BI	CACGAG	2 cut(s)	43, 689
Bst2UI	CCWGG	2 cut(s)	403, 435
Bst4CI	ACNGT	3 cut(s)	569, 998, 1586
Bst6I	CTCTTC	4 cut(s)	675, 1194, 1451, 1584
BstAPI	GCANNNNNTGC	1 cut(s)	1352
BstAUI	TGTACA	1 cut(s)	604
BstBI	TTCGAA	2 cut(s)	293, 1503
BstC8I	GCNNGC	2 cut(s)	906, 1263
BstDEI	CTNAG	7 cut(s)	356, 423, 1284, 1416, 1452, 1463, 1512
BstENI	CCTNNNNNAGG	1 cut(s)	692
BstF5I	GGATG	4 cut(s)	507, 715, 1007, 1654
BstHHI	GCGC	1 cut(s)	1333
BstKTI	GATC	6 cut(s)	397, 783, 884, 1003, 1171, 1720
BstMAI	GTCTC	5 cut(s)	132, 575, 1109, 1453, 1531
BstMBI	GATC	6 cut(s)	394, 780, 881, 1000, 1168, 1717
BstMWI	GCNNNNNNNGC	9 cut(s)	367, 1072, 1286, 1289, 1352, 1388, 1394, 1421, 1430
BstNI	CCWGG	2 cut(s)	403, 435
BstNSI	RCATGY	3 cut(s)	240, 255, 611
BstSCI	CCNGG	2 cut(s)	401, 433
BstSFI	CTRYAG	1 cut(s)	1425
BstX2I	RGATCY	2 cut(s)	780, 881
BstXI	CCANNNNNNTGG	1 cut(s)	637
BstYI	RGATCY	2 cut(s)	780, 881
Bsu15I	ATCGAT	1 cut(s)	966
BsuRI	GGCC	2 cut(s)	210, 765
BsuTUI	ATCGAT	1 cut(s)	966
BtsCI	GGATG	4 cut(s)	507, 715, 1007, 1654
BtsIMutI	CAGTG	3 cut(s)	529, 1003, 1591
Cac8I	GCNNGC	2 cut(s)	906, 1263
CaiI	CAGNNNCTG	2 cut(s)	662, 1433
CfoI	GCGC	1 cut(s)	1333
Cfr13I	GGNCC	1 cut(s)	208
ClaI	ATCGAT	1 cut(s)	966
Csp6I	GTAC	4 cut(s)	227, 605, 1249, 1711
CviAII	CATG	6 cut(s)	237, 252, 487, 608, 1580, 1637
CviQI	GTAC	4 cut(s)	227, 605, 1249, 1711
DdeI	CTNAG	7 cut(s)	356, 423, 1284, 1416, 1452, 1463, 1512
DpnI	GATC	6 cut(s)	396, 782, 883, 1002, 1170, 1719
DpnII	GATC	6 cut(s)	394, 780, 881, 1000, 1168, 1717
Eam1104I	CTCTTC	4 cut(s)	675, 1194, 1451, 1584
EarI	CTCTTC	4 cut(s)	675, 1194, 1451, 1584
Eco31I	GGTCTC	2 cut(s)	575, 1109
Eco32I	GATATC	1 cut(s)	1300
Eco57I	CTGAAG	3 cut(s)	1146, 1362, 1413
EcoNI	CCTNNNNNAGG	1 cut(s)	692
EcoRII	CCWGG	2 cut(s)	401, 433
EcoRV	GATATC	1 cut(s)	1300
EcoT22I	ATGCAT	1 cut(s)	1609
FaeI	CATG	6 cut(s)	240, 255, 490, 611, 1583, 1640
FatI	CATG	6 cut(s)	236, 251, 486, 607, 1579, 1636
FbaI	TGATCA	1 cut(s)	1000
FblI	GTMKAC	1 cut(s)	1704
FokI	GGATG	4 cut(s)	514, 722, 994, 1661
FspBI	CTAG	2 cut(s)	1379, 1383
FspI	TGCGCA	1 cut(s)	1332
GlaI	GCGC	1 cut(s)	1332
GsaI	CCCAGC	1 cut(s)	326
GsuI	CTGGAG	3 cut(s)	1193, 1395, 1511
HaeIII	GGCC	2 cut(s)	210, 765
HapII	CCGG	1 cut(s)	1119
HhaI	GCGC	1 cut(s)	1333
Hin1II	CATG	6 cut(s)	240, 255, 490, 611, 1583, 1640
Hin6I	GCGC	1 cut(s)	1331
HinP1I	GCGC	1 cut(s)	1331
HincII	GTYRAC	1 cut(s)	1180
HindII	GTYRAC	1 cut(s)	1180
HindIII	AAGCTT	2 cut(s)	30, 1128
HinfI	GANTC	6 cut(s)	659, 956, 1142, 1240, 1461, 1547
HpaII	CCGG	1 cut(s)	1119
Hpy166II	GTNNAC	8 cut(s)	431, 527, 773, 791, 869, 1180, 1438, 1705
Hpy188I	TCNGA	9 cut(s)	86, 220, 357, 589, 1147, 1159, 1419, 1513, 1739
Hpy8I	GTNNAC	8 cut(s)	431, 527, 773, 791, 869, 1180, 1438, 1705
HpyAV	CCTTC	8 cut(s)	408, 435, 688, 1199, 1264, 1307, 1649, 1658
HpyCH4III	ACNGT	3 cut(s)	569, 998, 1586
HpyF10VI	GCNNNNNNNGC	9 cut(s)	367, 1072, 1286, 1289, 1352, 1388, 1394, 1421, 1430
HpyF3I	CTNAG	7 cut(s)	356, 423, 1284, 1416, 1452, 1463, 1512
Hsp92II	CATG	6 cut(s)	240, 255, 490, 611, 1583, 1640
HspAI	GCGC	1 cut(s)	1331
Ksp22I	TGATCA	1 cut(s)	1000
Kzo9I	GATC	6 cut(s)	394, 780, 881, 1000, 1168, 1717
LguI	GCTCTTC	1 cut(s)	1584
LmnI	GCTCC	7 cut(s)	326, 584, 666, 940, 1072, 1258, 1522
LweI	GCATC	6 cut(s)	492, 607, 941, 972, 1563, 1594
MaeI	CTAG	2 cut(s)	1379, 1383
MalI	GATC	6 cut(s)	396, 782, 883, 1002, 1170, 1719
MbiI	CCGCTC	1 cut(s)	193
MboI	GATC	6 cut(s)	394, 780, 881, 1000, 1168, 1717
MfeI	CAATTG	4 cut(s)	10, 186, 375, 1303
MflI	RGATCY	2 cut(s)	780, 881
MhlI	GDGCHC	2 cut(s)	372, 581
MlyI	GAGTC	3 cut(s)	950, 1151, 1455
MmeI	TCCRAC	1 cut(s)	64
Mph1103I	ATGCAT	1 cut(s)	1609
MroXI	GAANNNNTTC	1 cut(s)	1499
MseI	TTAA	4 cut(s)	57, 716, 945, 1194
MslI	CAYNNNNRTG	4 cut(s)	485, 612, 1584, 1641
MspA1I	CMGCKG	3 cut(s)	1109, 1349, 1391
MspI	CCGG	1 cut(s)	1119
MspR9I	CCNGG	2 cut(s)	403, 435
MunI	CAATTG	4 cut(s)	10, 186, 375, 1303
MvaI	CCWGG	2 cut(s)	403, 435
MwoI	GCNNNNNNNGC	9 cut(s)	367, 1072, 1286, 1289, 1352, 1388, 1394, 1421, 1430
NdeII	GATC	6 cut(s)	394, 780, 881, 1000, 1168, 1717
NlaIII	CATG	6 cut(s)	240, 255, 490, 611, 1583, 1640
NlaIV	GGNNCC	3 cut(s)	209, 1074, 1518
NsbI	TGCGCA	1 cut(s)	1332
NsiI	ATGCAT	1 cut(s)	1609
NspI	RCATGY	3 cut(s)	240, 255, 611
NspV	TTCGAA	2 cut(s)	293, 1503
PciI	ACATGT	1 cut(s)	607
PciSI	GCTCTTC	1 cut(s)	1584
PdmI	GAANNNNTTC	1 cut(s)	1499
PfeI	GAWTC	3 cut(s)	659, 1240, 1547
PflFI	GACNNNGTC	1 cut(s)	828
PleI	GAGTC	3 cut(s)	950, 1150, 1455
PpsI	GAGTC	3 cut(s)	950, 1150, 1455
PscI	ACATGT	1 cut(s)	607
Psp6I	CCWGG	2 cut(s)	401, 433
PspFI	CCCAGC	1 cut(s)	322
PspGI	CCWGG	2 cut(s)	401, 433
PspN4I	GGNNCC	3 cut(s)	209, 1074, 1518
PspPI	GGNCC	1 cut(s)	208
PstI	CTGCAG	1 cut(s)	1429
PstNI	CAGNNNCTG	2 cut(s)	662, 1433
PsuI	RGATCY	2 cut(s)	780, 881
PsyI	GACNNNGTC	1 cut(s)	828
PvuII	CAGCTG	3 cut(s)	1109, 1349, 1391
RsaI	GTAC	4 cut(s)	228, 606, 1250, 1712
RsaNI	GTAC	4 cut(s)	227, 605, 1249, 1711
RseI	CAYNNNNRTG	4 cut(s)	485, 612, 1584, 1641
SapI	GCTCTTC	1 cut(s)	1584
SaqAI	TTAA	4 cut(s)	57, 716, 945, 1194
Sau3AI	GATC	6 cut(s)	394, 780, 881, 1000, 1168, 1717
Sau96I	GGNCC	1 cut(s)	208
SchI	GAGTC	3 cut(s)	950, 1151, 1455
ScrFI	CCNGG	2 cut(s)	403, 435
SduI	GDGCHC	2 cut(s)	372, 581
SfaNI	GCATC	6 cut(s)	492, 607, 941, 972, 1563, 1594
SfcI	CTRYAG	1 cut(s)	1425
SfuI	TTCGAA	2 cut(s)	293, 1503
SmiMI	CAYNNNNRTG	4 cut(s)	485, 612, 1584, 1641
SmlI	CTYRAG	1 cut(s)	572
SmoI	CTYRAG	1 cut(s)	572
SsiI	CCGC	3 cut(s)	193, 634, 938
SspMI	CTAG	2 cut(s)	1379, 1383
StyD4I	CCNGG	2 cut(s)	401, 433
TaaI	ACNGT	3 cut(s)	569, 998, 1586
TaqI	TCGA	3 cut(s)	293, 966, 1503
TatI	WGTACW	4 cut(s)	226, 604, 1248, 1710
TauI	GCSGC	1 cut(s)	637
TfiI	GAWTC	3 cut(s)	659, 1240, 1547
Tru1I	TTAA	4 cut(s)	57, 716, 945, 1194
Tru9I	TTAA	4 cut(s)	57, 716, 945, 1194
TscAI	CASTG	3 cut(s)	529, 1003, 1591
TspDTI	ATGAA	8 cut(s)	117, 401, 503, 726, 1212, 1253, 1665, 1713
TspGWI	ACGGA	1 cut(s)	891
TspRI	CASTG	3 cut(s)	529, 1003, 1591
Tth111I	GACNNNGTC	1 cut(s)	828
XagI	CCTNNNNNAGG	1 cut(s)	692
XapI	RAATTY	5 cut(s)	17, 196, 644, 1541, 1598
XceI	RCATGY	3 cut(s)	240, 255, 611
XmiI	GTMKAC	1 cut(s)	1704
XmnI	GAANNNNTTC	1 cut(s)	1499
XspI	CTAG	2 cut(s)	1379, 1383
Zsp2I	ATGCAT	1 cut(s)	1609

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.