Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0000772

Physical Location & Seq

Genomic Coordinates Forward (+)

15745993 .. 15758525

Gene Structure 12533 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G180700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1815 bp

ATGCCGTTTTGTTCTCACTGTAGAAAGAAAGTCAGTGGAATTAACGATGGTGGTAGAATATCGTGTTCTGGGTGTGGGAAGGTTTTAGAGTATGACCTTTACTCTGACGAACCCACATTCGTTAAAAATGCGGCCGGCCAGAGCCAATTGGCTGGAAGAAATGTACGTAGCATTCAGAGTGATGACTCAGCTTCCCGTGCGAGGATATTCGAGAATGCCGAATACGAATTAAGATGCATGAGAAATGCTTTAGATATGGGAGAAAATGAAGAAATTGTTGACATTGCTAAGCGCTTTTTTAGAATTGCAGTAGACCGGAATTTCACCAGGGGCCGTAAATCAGAGCAAGTGCTGGCTTCGTGTCTTTACATTGCATGTCGGGAAAAGAGGAAGCCGTATCTTCTTATTGATTTTTCAAATTACTTGAAGATAAATGTTTATGTGCTAGGTGCCGTGTTTTTGCAGCTTTGCAAAGTTTTTATGCTTGACGAGCACCCAATTGTTCAAAAACCTGTTGATCCTTCTTGGTTTATTCATAAATTTACAGAGAGTTTACCAGGAGGAACAGATAAAGGGGTTATCCAAACTGCACAGCGGATTATCACTAGCATGAAACGGGATTGGATGCAGACAGGTAGAAAACCCAGTGGGCTATGTGGTGCTGCATTATATATATCTGCACTTTCACATGGTCTCAAGTGTTCCAAGTCTGATATTATCAGAATTGTGCATGTTTGTGATGCAACATTGACCAAGCGGCTGGTTGAGTTTGAGAATACAGAATCTGGAAGCTTGACGATTGAAGAGTTCCTTGTAAAGGCAAGGGAGCTAGAAGAATTAAGCCAAGAACCAAACTTGGCAGCAAAAGTTGATAACACAGATGAAGTCCTTTGTGAGCATAAGGGTAGTGCAAAACCTTTTCAATATGGACTTTGTAGAGTTTGCTATGATGATTTTATGCAAATTTCAGGTGGACTTGAGGGAGGGTCTAATCCTCCAGCTTTCCAGCGTGCTGAAATAAAGAGATTGGAGGAAGCATCTACTGAGGAAAATGCTAATGACTCTGGTGCTGATAACATACCTTGTCAAAGCCTAGACAACAGTGAAGAGATATTAAATTGTGAGAAAGAACCGAACAATTCAAAAGCAGAAAGTGGGGGCGAAGGATTGCAGTTTACGGAGCCTGAAAGCGTTGGTGATGATACGTTGAAAACAGGTGTTGAGGTGGGTACTGAAGATTGTGATGAACCTGACAACCTTTCGGATATTGATGACGCAGAGGTTGATAGCTACCTTCTAAATGAAGAGGGGAAACGTTACAAAAAGATGATTTGGGAAGAAGTGAACCGGGAGTACATTGAGGAGCAAGCAGCTAAGGAGCGAGAAGCCAAGGCTGCTGGTATGGATCCCAACTGTCCAGAAGATGCAAAGAAGGTAGCCACAGCAAAGAAAAGAAAGGAAAGGCAACTAGCTCGAGCAGCTGAAGCAAGGAATGATACTGAAGCTCAAACTGCTGCAGAAGCTGTCCACCAAATGTTGACTAAGAAGAGACTCAGCTCAAAAATCAACTTTGATGCCCTAGAGGACATGTTCCAAACAGCTGAGGCTCCAGATAACTCCAAGAAAAAGAAAGAATCGCATCCTGACATTGATGGTGTGATGCAACATGAAGAGGGGCTTGAATTCGATGCATACAAAAATGATGAAAATGAAGATGATGGAAATGAAGGAACAGTTGGCTACAATATTCTTGATCCTGAAAATGTTGATGAACAGTACGACTATGAAGATTATGGTTATGGTGATGACTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000126 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0006139 GO:0006351 GO:0006352 GO:0006383 GO:0006384 GO:0006399 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009303 GO:0009304 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0018130 GO:0019438 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044798 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0090576 GO:0097659 GO:0098781 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRF1 TFIIB

Protein Analysis

605

Amino Acids

67.72

Weight (kDa)

4.73

Isoelectric Point (pI)

41.0

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000772)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30455 AT2G01280 AT2G01280 AT2G01280 AT2G45100 AT2G45100 AT2G45100 AT3G09360 AT3G09360 AT3G09360
fragaria_vesca	FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_7g06241
malus_domestica	MD04G1033900.v1.1
prunus_persica	Prupe.1G180700_v2.0.a1
pyrus_communis	pycom04g02830
rosa_chinensis	RchiOBHm_Chr4g0409121 RchiOBHm_Chr7g0228131
rosa_laevigata	RLG00000001586 RLG00000008590
rosa_multiflora	Rmu_sc0001348.1_g000036 Rmu_sc0001348.1_g000042 Rmu_sc0001526.1_g000006 Rmu_sc0001526.1_g000008 Rmu_sc0012031.1_g000013 Rmu_sc0021826.1_g000001 Rmu_ssc0000372.1_g000072
rosa_roxburghii	Rroxscaffold_2G00115130 Rroxscaffold_3G00231370 Rroxscaffold_5G00353680 Rroxscaffold_7G00191300
rosa_rugosa	Rorug04G0090500 Rorug04G0090600 Rorug04G0090700 Rorug07G0245700 Rorug07G0245800
rosa_samantha	Rh2AG319000 Rh4AG154400 Rh4BG152200 Rh4CG163600 Rh4CG264400 Rh4DG147400 Rh5DG375300 Rh7AG400000 Rh7BG381300 Rh7CG418200 Rh7DG396100
rosa_wichuraiana	Rw0G005090 Rw0G011060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	449
AccI	GTMKAC	1 cut(s)	312
AciI	CCGC	3 cut(s)	131, 595, 757
AclI	AACGTT	1 cut(s)	1315
AclWI	GGATC	4 cut(s)	512, 1400, 1413, 1748
AcoI	YGGCCR	2 cut(s)	132, 136
AcsI	RAATTY	4 cut(s)	319, 539, 963, 1682
AcuI	CTGAAG	3 cut(s)	1254, 1503, 1521
AfaI	GTAC	4 cut(s)	165, 1231, 1355, 1778
AfeI	AGCGCT	1 cut(s)	293
AfiI	CCNNNNNNNGG	2 cut(s)	201, 817
AflIII	ACRYGT	1 cut(s)	1587
AgsI	TTSAA	8 cut(s)	417, 427, 506, 803, 923, 1143, 1210, 1682
AjnI	CCWGG	2 cut(s)	326, 556
AjuI	GAANNNNNNNTTGG	2 cut(s)	1719, 1751
Alw21I	GWGCWC	1 cut(s)	495
Alw26I	GTCTC	2 cut(s)	698, 1543
AlwI	GGATC	4 cut(s)	512, 1400, 1413, 1748
AlwNI	CAGNNNCTG	2 cut(s)	785, 1523
Ama87I	CYCGRG	1 cut(s)	1473
Aor51HI	AGCGCT	1 cut(s)	293
AoxI	GGCC	3 cut(s)	132, 136, 331
ApeKI	GCWGC	7 cut(s)	463, 662, 860, 1370, 1394, 1478, 1514
ApoI	RAATTY	4 cut(s)	319, 539, 963, 1682
AspLEI	GCGC	1 cut(s)	294
AspS9I	GGNCC	1 cut(s)	331
AsuC2I	CCSGG	1 cut(s)	1349
AsuHPI	GGTGA	3 cut(s)	316, 1208, 1814
AvaI	CYCGRG	1 cut(s)	1473
BamHI	GGATCC	1 cut(s)	1405
BanI	GGYRCC	1 cut(s)	449
Bbv12I	GWGCWC	1 cut(s)	495
BbvCI	CCTCAGC	1 cut(s)	1602
BbvI	GCAGC	7 cut(s)	475, 649, 872, 1381, 1382, 1490, 1501
BccI	CCATC	3 cut(s)	41, 1646, 1712
BceAI	ACGGC	3 cut(s)	318, 379, 437
BcgI	CGANNNNNNTGC	2 cut(s)	1454, 1488
BciT130I	CCWGG	2 cut(s)	328, 558
BcnI	CCSGG	1 cut(s)	1349
BcoDI	GTCTC	2 cut(s)	698, 1543
BfaI	CTAG	6 cut(s)	446, 606, 830, 1094, 1469, 1580
BfmI	CTRYAG	2 cut(s)	19, 1515
BfoI	RGCGCY	1 cut(s)	295
BisI	GCNGC	9 cut(s)	132, 464, 663, 758, 861, 1371, 1395, 1479, 1515
BlpI	GCTNAGC	1 cut(s)	288
BlsI	GCNGC	9 cut(s)	133, 465, 664, 759, 862, 1372, 1396, 1480, 1516
Bme1390I	CCNGG	3 cut(s)	328, 558, 1349
BmeT110I	CYCGRG	1 cut(s)	1473
BmgT120I	GGNCC	1 cut(s)	331
BmiI	GGNNCC	5 cut(s)	332, 451, 1182, 1407, 1608
BmrFI	CCNGG	3 cut(s)	328, 558, 1349
BmrI	ACTGGG	1 cut(s)	639
BmsI	GCATC	9 cut(s)	224, 615, 730, 1046, 1414, 1564, 1648, 1650, 1678
BmuI	ACTGGG	1 cut(s)	639
BpmI	CTGGAG	2 cut(s)	981, 1593
Bpu10I	CCTNAGC	2 cut(s)	1374, 1602
Bpu1102I	GCTNAGC	1 cut(s)	288
BpuEI	CTTGAG	2 cut(s)	680, 998
BpuMI	CCSGG	1 cut(s)	1349
BsaAI	YACGTR	1 cut(s)	167
BsaI	GGTCTC	1 cut(s)	698
BsaJI	CCNNGG	2 cut(s)	327, 1389
BsaWI	WCCGGW	1 cut(s)	315
Bsc4I	CCNNNNNNNGG	2 cut(s)	201, 817
Bse118I	RCCGGY	1 cut(s)	134
Bse1I	ACTGG	1 cut(s)	645
Bse3DI	GCAATG	2 cut(s)	282, 369
BseBI	CCWGG	2 cut(s)	328, 558
BseDI	CCNNGG	2 cut(s)	327, 1389
BseGI	GGATG	2 cut(s)	630, 1639
BseLI	CCNNNNNNNGG	2 cut(s)	201, 817
BseMI	GCAATG	2 cut(s)	282, 369
BseMII	CTCAG	4 cut(s)	201, 1035, 1567, 1593
BseNI	ACTGG	1 cut(s)	645
BseRI	GAGGAG	1 cut(s)	1376
BseX3I	CGGCCG	1 cut(s)	132
BseXI	GCAGC	7 cut(s)	475, 649, 872, 1381, 1382, 1490, 1501
BsgI	GTGCAG	2 cut(s)	573, 663
Bsh1285I	CGRYCG	1 cut(s)	135
BshFI	GGCC	3 cut(s)	134, 138, 333
BshNI	GGYRCC	1 cut(s)	449
BsiEI	CGRYCG	1 cut(s)	135
BsiHKAI	GWGCWC	1 cut(s)	495
BsiHKCI	CYCGRG	1 cut(s)	1473
BsiSI	CCGG	3 cut(s)	135, 316, 1348
BslI	CCNNNNNNNGG	2 cut(s)	201, 817
BsmAI	GTCTC	2 cut(s)	698, 1543
BsmI	GAATGC	2 cut(s)	171, 220
BsnI	GGCC	3 cut(s)	134, 138, 333
Bso31I	GGTCTC	1 cut(s)	698
BsoBI	CYCGRG	1 cut(s)	1473
Bsp1286I	GDGCHC	1 cut(s)	495
Bsp143I	GATC	3 cut(s)	517, 1405, 1753
Bsp1720I	GCTNAGC	1 cut(s)	288
BspACI	CCGC	3 cut(s)	131, 595, 757
BspANI	GGCC	3 cut(s)	134, 138, 333
BspCNI	CTCAG	4 cut(s)	200, 1036, 1566, 1594
BspLI	GGNNCC	5 cut(s)	332, 451, 1182, 1407, 1608
BspMAI	CTGCAG	1 cut(s)	1519
BspPI	GGATC	4 cut(s)	512, 1400, 1413, 1748
BspT107I	GGYRCC	1 cut(s)	449
BspTNI	GGTCTC	1 cut(s)	698
BsrDI	GCAATG	2 cut(s)	282, 369
BsrFI	RCCGGY	1 cut(s)	134
BsrI	ACTGG	1 cut(s)	645
BssAI	RCCGGY	1 cut(s)	134
BssECI	CCNNGG	2 cut(s)	327, 1389
BssMI	GATC	3 cut(s)	517, 1405, 1753
BssT1I	CCWWGG	1 cut(s)	1389
Bst2UI	CCWGG	2 cut(s)	328, 558
Bst4CI	ACNGT	5 cut(s)	20, 1103, 1415, 1735, 1776
Bst6I	CTCTTC	5 cut(s)	798, 1101, 1299, 1541, 1665
BstBAI	YACGTR	1 cut(s)	167
BstC8I	GCNNGC	4 cut(s)	136, 354, 1011, 1368
BstDEI	CTNAG	7 cut(s)	187, 288, 1044, 1374, 1542, 1553, 1602
BstENI	CCTNNNNNAGG	1 cut(s)	815
BstF5I	GGATG	2 cut(s)	630, 1639
BstH2I	RGCGCY	1 cut(s)	295
BstHHI	GCGC	1 cut(s)	294
BstKTI	GATC	3 cut(s)	520, 1408, 1756
BstMAI	GTCTC	2 cut(s)	698, 1543
BstMBI	GATC	3 cut(s)	517, 1405, 1753
BstMCI	CGRYCG	1 cut(s)	135
BstMWI	GCNNNNNNNGC	7 cut(s)	197, 490, 1394, 1478, 1484, 1511, 1520
BstNI	CCWGG	2 cut(s)	328, 558
BstNSI	RCATGY	3 cut(s)	378, 734, 1591
BstSCI	CCNGG	3 cut(s)	326, 556, 1347
BstSFI	CTRYAG	2 cut(s)	19, 1515
BstSNI	TACGTA	1 cut(s)	167
BstV1I	GCAGC	7 cut(s)	475, 649, 872, 1381, 1382, 1490, 1501
BstX2I	RGATCY	1 cut(s)	1405
BstXI	CCANNNNNNTGG	2 cut(s)	152, 760
BstYI	RGATCY	1 cut(s)	1405
BstZI	CGGCCG	1 cut(s)	132
BsuRI	GGCC	3 cut(s)	134, 138, 333
BtsCI	GGATG	2 cut(s)	630, 1639
BtsIMutI	CAGTG	4 cut(s)	16, 40, 652, 1108
Cac8I	GCNNGC	4 cut(s)	136, 354, 1011, 1368
CaiI	CAGNNNCTG	2 cut(s)	785, 1523
CfoI	GCGC	1 cut(s)	294
Cfr10I	RCCGGY	1 cut(s)	134
Cfr13I	GGNCC	1 cut(s)	331
CseI	GACGC	1 cut(s)	1283
Csp6I	GTAC	4 cut(s)	164, 1230, 1354, 1777
CviAII	CATG	7 cut(s)	238, 375, 610, 689, 731, 1588, 1667
CviQI	GTAC	4 cut(s)	164, 1230, 1354, 1777
DdeI	CTNAG	7 cut(s)	187, 288, 1044, 1374, 1542, 1553, 1602
DpnI	GATC	3 cut(s)	519, 1407, 1755
DpnII	GATC	3 cut(s)	517, 1405, 1753
EaeI	YGGCCR	2 cut(s)	132, 136
EagI	CGGCCG	1 cut(s)	132
Eam1104I	CTCTTC	5 cut(s)	798, 1101, 1299, 1541, 1665
EarI	CTCTTC	5 cut(s)	798, 1101, 1299, 1541, 1665
EclXI	CGGCCG	1 cut(s)	132
Eco105I	TACGTA	1 cut(s)	167
Eco130I	CCWWGG	1 cut(s)	1389
Eco31I	GGTCTC	1 cut(s)	698
Eco47III	AGCGCT	1 cut(s)	293
Eco52I	CGGCCG	1 cut(s)	132
Eco57I	CTGAAG	3 cut(s)	1254, 1503, 1521
Eco88I	CYCGRG	1 cut(s)	1473
EcoNI	CCTNNNNNAGG	1 cut(s)	815
EcoRI	GAATTC	1 cut(s)	1682
EcoRII	CCWGG	2 cut(s)	326, 556
EcoT14I	CCWWGG	1 cut(s)	1389
EcoT22I	ATGCAT	2 cut(s)	239, 1693
ErhI	CCWWGG	1 cut(s)	1389
FaeI	CATG	7 cut(s)	241, 378, 613, 692, 734, 1591, 1670
FalI	AAGNNNNNCTT	4 cut(s)	795, 827, 1662, 1694
FatI	CATG	7 cut(s)	237, 374, 609, 688, 730, 1587, 1666
FblI	GTMKAC	1 cut(s)	312
Fnu4HI	GCNGC	9 cut(s)	132, 464, 663, 758, 861, 1371, 1395, 1479, 1515
FokI	GGATG	2 cut(s)	637, 1626
FseI	GGCCGGCC	1 cut(s)	138
Fsp4HI	GCNGC	9 cut(s)	132, 464, 663, 758, 861, 1371, 1395, 1479, 1515
FspBI	CTAG	6 cut(s)	446, 606, 830, 1094, 1469, 1580
GlaI	GCGC	1 cut(s)	293
GluI	GCNGC	9 cut(s)	132, 464, 663, 758, 861, 1371, 1395, 1479, 1515
GsuI	CTGGAG	2 cut(s)	981, 1593
HaeII	RGCGCY	1 cut(s)	295
HaeIII	GGCC	3 cut(s)	134, 138, 333
HapII	CCGG	3 cut(s)	135, 316, 1348
HgaI	GACGC	1 cut(s)	1283
HhaI	GCGC	1 cut(s)	294
Hin1II	CATG	7 cut(s)	241, 378, 613, 692, 734, 1591, 1670
Hin6I	GCGC	1 cut(s)	292
HinP1I	GCGC	1 cut(s)	292
HincII	GTYRAC	2 cut(s)	280, 1539
HindII	GTYRAC	2 cut(s)	280, 1539
HindIII	AAGCTT	1 cut(s)	790
HinfI	GANTC	5 cut(s)	185, 782, 1061, 1551, 1634
HpaII	CCGG	3 cut(s)	135, 316, 1348
HphI	GGTGA	3 cut(s)	316, 1208, 1814
Hpy166II	GTNNAC	8 cut(s)	280, 313, 554, 974, 1176, 1345, 1528, 1539
Hpy188I	TCNGA	6 cut(s)	106, 177, 343, 712, 722, 1264
Hpy188III	TCNNGA	8 cut(s)	211, 380, 786, 1418, 1610, 1643, 1751, 1757
Hpy8I	GTNNAC	8 cut(s)	280, 313, 554, 974, 1176, 1345, 1528, 1539
HpyAV	CCTTC	6 cut(s)	73, 531, 1157, 1304, 1426, 1721
HpyCH4III	ACNGT	5 cut(s)	20, 1103, 1415, 1735, 1776
HpyCH4IV	ACGT	3 cut(s)	166, 1205, 1315
HpyF10VI	GCNNNNNNNGC	7 cut(s)	197, 490, 1394, 1478, 1484, 1511, 1520
HpyF3I	CTNAG	7 cut(s)	187, 288, 1044, 1374, 1542, 1553, 1602
HpySE526I	ACGT	3 cut(s)	166, 1205, 1315
Hsp92II	CATG	7 cut(s)	241, 378, 613, 692, 734, 1591, 1670
HspAI	GCGC	1 cut(s)	292
KroI	GCCGGC	1 cut(s)	134
KroNI	GCCGGC	1 cut(s)	136
Kzo9I	GATC	3 cut(s)	517, 1405, 1753
LmnI	GCTCC	5 cut(s)	826, 1180, 1363, 1378, 1612
Lsp1109I	GCAGC	7 cut(s)	475, 649, 872, 1381, 1382, 1490, 1501
LweI	GCATC	9 cut(s)	224, 615, 730, 1046, 1414, 1564, 1648, 1650, 1678
MaeI	CTAG	6 cut(s)	446, 606, 830, 1094, 1469, 1580
MaeII	ACGT	3 cut(s)	166, 1205, 1315
MaeIII	GTNAC	1 cut(s)	1316
MalI	GATC	3 cut(s)	519, 1407, 1755
MboI	GATC	3 cut(s)	517, 1405, 1753
MfeI	CAATTG	2 cut(s)	146, 498
MflI	RGATCY	1 cut(s)	1405
MhlI	GDGCHC	1 cut(s)	495
MlyI	GAGTC	3 cut(s)	179, 1055, 1545
Mph1103I	ATGCAT	2 cut(s)	239, 1693
MroNI	GCCGGC	1 cut(s)	134
MseI	TTAA	5 cut(s)	42, 123, 230, 839, 1115
MslI	CAYNNNNRTG	2 cut(s)	608, 735
MspA1I	CMGCKG	3 cut(s)	595, 1481, 1601
MspI	CCGG	3 cut(s)	135, 316, 1348
MspR9I	CCNGG	3 cut(s)	328, 558, 1349
MunI	CAATTG	2 cut(s)	146, 498
Mva1269I	GAATGC	2 cut(s)	171, 220
MvaI	CCWGG	2 cut(s)	328, 558
MwoI	GCNNNNNNNGC	7 cut(s)	197, 490, 1394, 1478, 1484, 1511, 1520
NaeI	GCCGGC	1 cut(s)	136
NciI	CCSGG	1 cut(s)	1349
NdeII	GATC	3 cut(s)	517, 1405, 1753
NgoMIV	GCCGGC	1 cut(s)	134
NlaIII	CATG	7 cut(s)	241, 378, 613, 692, 734, 1591, 1670
NlaIV	GGNNCC	5 cut(s)	332, 451, 1182, 1407, 1608
NsiI	ATGCAT	2 cut(s)	239, 1693
NspI	RCATGY	3 cut(s)	378, 734, 1591
PaeR7I	CTCGAG	1 cut(s)	1473
PciI	ACATGT	1 cut(s)	1587
PcsI	WCGNNNNNNNCGW	1 cut(s)	216
PctI	GAATGC	2 cut(s)	171, 220
PdiI	GCCGGC	1 cut(s)	136
PfeI	GAWTC	2 cut(s)	782, 1634
PkrI	GCNGC	9 cut(s)	133, 465, 664, 759, 862, 1372, 1396, 1480, 1516
PleI	GAGTC	3 cut(s)	179, 1055, 1545
PpsI	GAGTC	3 cut(s)	179, 1055, 1545
Ppu21I	YACGTR	1 cut(s)	167
PscI	ACATGT	1 cut(s)	1587
Psp1406I	AACGTT	1 cut(s)	1315
Psp6I	CCWGG	2 cut(s)	326, 556
PspGI	CCWGG	2 cut(s)	326, 556
PspN4I	GGNNCC	5 cut(s)	332, 451, 1182, 1407, 1608
PspPI	GGNCC	1 cut(s)	331
PspXI	VCTCGAGB	1 cut(s)	1473
PsrI	GAACNNNNNNTAC	2 cut(s)	1337, 1369
PstI	CTGCAG	1 cut(s)	1519
PstNI	CAGNNNCTG	2 cut(s)	785, 1523
PsuI	RGATCY	1 cut(s)	1405
PvuII	CAGCTG	2 cut(s)	1481, 1601
RigI	GGCCGGCC	1 cut(s)	138
RsaI	GTAC	4 cut(s)	165, 1231, 1355, 1778
RsaNI	GTAC	4 cut(s)	164, 1230, 1354, 1777
RseI	CAYNNNNRTG	2 cut(s)	608, 735
SaqAI	TTAA	5 cut(s)	42, 123, 230, 839, 1115
SatI	GCNGC	9 cut(s)	132, 464, 663, 758, 861, 1371, 1395, 1479, 1515
Sau3AI	GATC	3 cut(s)	517, 1405, 1753
Sau96I	GGNCC	1 cut(s)	331
SchI	GAGTC	3 cut(s)	179, 1055, 1545
ScrFI	CCNGG	3 cut(s)	328, 558, 1349
SduI	GDGCHC	1 cut(s)	495
SfaNI	GCATC	9 cut(s)	224, 615, 730, 1046, 1414, 1564, 1648, 1650, 1678
SfcI	CTRYAG	2 cut(s)	19, 1515
Sfr274I	CTCGAG	1 cut(s)	1473
SlaI	CTCGAG	1 cut(s)	1473
SmiMI	CAYNNNNRTG	2 cut(s)	608, 735
SmlI	CTYRAG	3 cut(s)	695, 977, 1473
SmoI	CTYRAG	3 cut(s)	695, 977, 1473
SnaBI	TACGTA	1 cut(s)	167
SsiI	CCGC	3 cut(s)	131, 595, 757
SspI	AATATT	1 cut(s)	1747
SspMI	CTAG	6 cut(s)	446, 606, 830, 1094, 1469, 1580
StyD4I	CCNGG	3 cut(s)	326, 556, 1347
StyI	CCWWGG	1 cut(s)	1389
TaaI	ACNGT	5 cut(s)	20, 1103, 1415, 1735, 1776
TaiI	ACGT	3 cut(s)	169, 1208, 1318
TaqI	TCGA	3 cut(s)	210, 1474, 1686
TatI	WGTACW	1 cut(s)	1353
TauI	GCSGC	2 cut(s)	134, 760
TfiI	GAWTC	2 cut(s)	782, 1634
Tru1I	TTAA	5 cut(s)	42, 123, 230, 839, 1115
Tru9I	TTAA	5 cut(s)	42, 123, 230, 839, 1115
TscAI	CASTG	4 cut(s)	23, 40, 652, 1108
TseI	GCWGC	7 cut(s)	463, 662, 860, 1370, 1394, 1478, 1514
TspGWI	ACGGA	1 cut(s)	1193
TspRI	CASTG	4 cut(s)	23, 40, 652, 1108
XagI	CCTNNNNNAGG	1 cut(s)	815
XapI	RAATTY	4 cut(s)	319, 539, 963, 1682
XceI	RCATGY	3 cut(s)	378, 734, 1591
XhoI	CTCGAG	1 cut(s)	1473
XmiI	GTMKAC	1 cut(s)	312
XspI	CTAG	6 cut(s)	446, 606, 830, 1094, 1469, 1580
Zsp2I	ATGCAT	2 cut(s)	239, 1693

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.