Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0000772

Physical Location & Seq

Genomic Coordinates Forward (+)

41224019 .. 41237666

Gene Structure 13648 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG381300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1647 bp

ATGGTGTTCTGTAATAATTGTGGGAAAAGTGTCCCTGGAACAGAAGATAGTGGAAGAATATGGTGTGACTTATGCGGCAAGGTTTTAGTGTATGACATTTACTCTGAAGAACCCACTTTTTTCAAAGATGCCGCCGGCCAGAGCAAACTGGCTGGAAATTTCGTGAGGGGTTTCCAAAGTGAAGTCTCGGCTTCTCGTGAAAGGCTGATTGATAATGCCAGATATGAATTAAGATGCCTGAGAAACGGTTTAGATATGGGGGAGAATGAAGAAATTACCGACATAGCTTTGCGCTTCTACACGATGGCGCTTGAGAGGAATTTCACAAGGGGCCGTATCACAGAGCGAGTACTGGCTGCATGTTTATACATTGCATGTCGGTCAAAGAGGAAGCCATATCTTCTTATTGAGTTCTCAAACTTGTTGAAGATAGATGTTTATACACTAGGTGCGGTATATATGCAACTGTGCAAAGTTCTTTATCTTGATCAGTATCCATTCGCAAACAGACTTGTTGATCCTTCCATCTTTATTGCTAAATTTTCAGGGAGTTTACCAGGAGGAAGGGATAAAAGAGTTATTCAAACTGCAGTGCGAATTATCACTAGCATGAAACGGAATTGGATGCAGACAGGCAGAAAACCCAGTGGGTTATGTGGTGCTGCATTATATATATCTGCAATTTCACATGGTCTCAAGTGTTCCAAGTCAGATTTTGTCAGGATTGCACATGTTTGCGATGCAACGTTGACCAAGCGGCTGAGTGAATTTGAGAATACAGATTCTGGGAGCTTGACGATTGAAGAGTTCCATCTGAAGGAAAGTGAGCTGGACGAATTATTTGAGCAACCAAATAGGACAGTTAAAATGGATAGCAGAGATGACATTCTTTGTGAACACAAGGATAGTGGAAAACCTTTTGCGCTTGGACTTTGTAAATTTTGTTATGATGATTTCGTGACAATTTCAGGTGGACTTCATGGAGGATCTAATCCTCCAGCTTTCCAGCGTGCTGAGATAGAAAGAAGGAAAAAAGAGTCTGCTCAGGAGAATGCTAGTGACTCTGATGTTGATATTTTACCTTGCCAAGGCCTAGACAACAGTCAACAATCAAATTTTGAAAGAGAACTGAATGGCTCAAGAGCTAGTGAAAATGGGCGATTACACTCTATGGAGAGTGTCGGGGCTCCTACTGTGGATACAGCTGTTCATGCGGGCAATGAATCTTGTGATGAGTCTGACAACCTTTCGGATATTGATGATGTAGAGGTTGATGAGTACCTCCTTGATGAAGAGGGGAAACATAACAAAACGATAATTTGGGAAGCACTGAACCGTGAATACATTGAGGAGCAAGCAGCTAAGGCTGCTAGGGGAACCGAATGTCCAGAATCTCAAGCTGCTGCAGCAAAAAAAAGAAAGGAAAGGCAACTAGCTCGAGCAGAGGAAGAGAGAAATTTTACTCCAGCTCAAACTGCTGCAGAAGCTGCTTACAGAACGCTAACTAAGAAGGTAATGATAATTGATAACTCTCATAATATTGATAAAGAGAGCTGTAGTAATCATTTTAGTTTATATCTTTTTTCTACACTCAGGAATAAAACAATTGAAGTGGAATATCTAAATCCTGACCTTGAGAGTGTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000126 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0006139 GO:0006351 GO:0006352 GO:0006383 GO:0006384 GO:0006399 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009303 GO:0009304 GO:0009987 GO:0010467 GO:0016070 GO:0016072 GO:0018130 GO:0019438 GO:0031974 GO:0031981 GO:0032774 GO:0032991 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044798 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0090576 GO:0097659 GO:0098781 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BRF1 TFIIB

Protein Analysis

548

Amino Acids

61.6

Weight (kDa)

5.32

Isoelectric Point (pI)

46.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TFIIB	PF00382	72 - 157	5.9e-15	Transcription factor TFIIB repeat
TFIIB	PF00382	169 - 259	8.2e-15	Transcription factor TFIIB repeat
BRF1	PF07741	417 - 505	1.6e-16	Brf1-like TBP-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000772)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G30455 AT2G01280 AT2G01280 AT2G01280 AT2G45100 AT2G45100 AT2G45100 AT3G09360 AT3G09360 AT3G09360
fragaria_vesca	FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_4g11810 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_5g32090 FvH4_7g06241
malus_domestica	MD04G1033900.v1.1
prunus_persica	Prupe.1G180700_v2.0.a1
pyrus_communis	pycom04g02830
rosa_chinensis	RchiOBHm_Chr4g0409121 RchiOBHm_Chr7g0228131
rosa_laevigata	RLG00000001586 RLG00000008590
rosa_multiflora	Rmu_sc0001348.1_g000036 Rmu_sc0001348.1_g000042 Rmu_sc0001526.1_g000006 Rmu_sc0001526.1_g000008 Rmu_sc0012031.1_g000013 Rmu_sc0021826.1_g000001 Rmu_ssc0000372.1_g000072
rosa_roxburghii	Rroxscaffold_2G00115130 Rroxscaffold_3G00231370 Rroxscaffold_5G00353680 Rroxscaffold_7G00191300
rosa_rugosa	Rorug04G0090500 Rorug04G0090600 Rorug04G0090700 Rorug07G0245700 Rorug07G0245800
rosa_samantha	Rh2AG319000 Rh4AG154400 Rh4BG152200 Rh4CG163600 Rh4CG264400 Rh4DG147400 Rh5DG375300 Rh7AG400000 Rh7BG381300 Rh7CG418200 Rh7DG396100
rosa_wichuraiana	Rw0G005090 Rw0G011060

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	5 cut(s)	75, 132, 452, 757, 1214
AclI	AACGTT	1 cut(s)	746
AclWI	GGATC	2 cut(s)	512, 994
AcoI	YGGCCR	1 cut(s)	136
AcsI	RAATTY	7 cut(s)	157, 319, 539, 767, 938, 1114, 1456
AcuI	CTGAAG	2 cut(s)	126, 836
AdeI	CACNNNGTG	1 cut(s)	449
AfaI	GTAC	2 cut(s)	351, 1280
AfiI	CCNNNNNNNGG	2 cut(s)	817, 1088
AflIII	ACRYGT	1 cut(s)	730
AgsI	TTSAA	6 cut(s)	124, 427, 584, 803, 1121, 1610
AjnI	CCWGG	2 cut(s)	34, 556
AloI	GAACNNNNNNTCC	2 cut(s)	1369, 1401
Alw26I	GTCTC	2 cut(s)	190, 698
AlwI	GGATC	2 cut(s)	512, 994
AlwNI	CAGNNNCTG	2 cut(s)	785, 1487
Ama87I	CYCGRG	1 cut(s)	1437
AoxI	GGCC	3 cut(s)	136, 331, 1090
ApeKI	GCWGC	9 cut(s)	356, 662, 1358, 1367, 1400, 1403, 1406, 1478, 1487
ApoI	RAATTY	7 cut(s)	157, 319, 539, 767, 938, 1114, 1456
ArsI	GACNNNNNNTTYG	2 cut(s)	824, 856
AspLEI	GCGC	3 cut(s)	294, 310, 925
AspS9I	GGNCC	1 cut(s)	331
AvaI	CYCGRG	1 cut(s)	1437
BaeI	ACNNNNGTAYC	2 cut(s)	1191, 1224
BanII	GRGCYC	1 cut(s)	1189
BauI	CACGAG	1 cut(s)	195
BbvI	GCAGC	9 cut(s)	343, 649, 1354, 1370, 1387, 1390, 1418, 1465, 1474
BccI	CCATC	3 cut(s)	298, 533, 819
BceAI	ACGGC	1 cut(s)	318
BcgI	CGANNNNNNTGC	2 cut(s)	1418, 1452
BciT130I	CCWGG	2 cut(s)	36, 558
BciVI	GTATCC	2 cut(s)	504, 1192
BclI	TGATCA	1 cut(s)	487
BcoDI	GTCTC	2 cut(s)	190, 698
BfaI	CTAG	7 cut(s)	446, 606, 1056, 1094, 1146, 1371, 1433
BfmI	CTRYAG	4 cut(s)	588, 1404, 1479, 1555
BfoI	RGCGCY	1 cut(s)	311
BfuI	GTATCC	2 cut(s)	504, 1192
BmcAI	AGTACT	1 cut(s)	351
Bme1390I	CCNGG	2 cut(s)	36, 558
BmeT110I	CYCGRG	1 cut(s)	1437
BmgT120I	GGNCC	1 cut(s)	331
BmiI	GGNNCC	3 cut(s)	332, 1188, 1378
BmrFI	CCNGG	2 cut(s)	36, 558
BmrI	ACTGGG	1 cut(s)	639
BmsI	GCATC	4 cut(s)	118, 224, 615, 730
BmuI	ACTGGG	1 cut(s)	639
BoxI	GACNNNNGTC	1 cut(s)	1101
BpmI	CTGGAG	2 cut(s)	981, 1449
Bpu10I	CCTNAGC	2 cut(s)	1044, 1362
BpuEI	CTTGAG	4 cut(s)	332, 680, 1123, 1380
BsaBI	GATNNNNATC	1 cut(s)	492
BsaI	GGTCTC	1 cut(s)	698
BsaJI	CCNNGG	2 cut(s)	34, 1087
Bsc4I	CCNNNNNNNGG	2 cut(s)	817, 1088
Bse118I	RCCGGY	1 cut(s)	134
Bse1I	ACTGG	3 cut(s)	153, 357, 645
Bse3DI	GCAATG	2 cut(s)	369, 1225
Bse8I	GATNNNNATC	1 cut(s)	492
BseBI	CCWGG	2 cut(s)	36, 558
BseDI	CCNNGG	2 cut(s)	34, 1087
BseGI	GGATG	1 cut(s)	630
BseJI	GATNNNNATC	1 cut(s)	492
BseLI	CCNNNNNNNGG	2 cut(s)	817, 1088
BseMI	GCAATG	2 cut(s)	369, 1225
BseMII	CTCAG	5 cut(s)	230, 752, 1005, 1058, 1606
BseNI	ACTGG	3 cut(s)	153, 357, 645
BseRI	GAGGAG	1 cut(s)	1364
BseXI	GCAGC	9 cut(s)	343, 649, 1354, 1370, 1387, 1390, 1418, 1465, 1474
BshFI	GGCC	3 cut(s)	138, 333, 1092
BsiHKCI	CYCGRG	1 cut(s)	1437
BsiSI	CCGG	1 cut(s)	135
BslFI	GGGAC	1 cut(s)	17
BslI	CCNNNNNNNGG	2 cut(s)	817, 1088
BsmAI	GTCTC	2 cut(s)	190, 698
BsmFI	GGGAC	1 cut(s)	17
BsmI	GAATGC	1 cut(s)	1057
BsnI	GGCC	3 cut(s)	138, 333, 1092
Bso31I	GGTCTC	1 cut(s)	698
BsoBI	CYCGRG	1 cut(s)	1437
Bsp1286I	GDGCHC	1 cut(s)	1189
Bsp143I	GATC	3 cut(s)	487, 517, 986
BspACI	CCGC	5 cut(s)	75, 132, 452, 757, 1214
BspANI	GGCC	3 cut(s)	138, 333, 1092
BspCNI	CTCAG	5 cut(s)	231, 753, 1006, 1057, 1605
BspLI	GGNNCC	3 cut(s)	332, 1188, 1378
BspMAI	CTGCAG	3 cut(s)	592, 1408, 1483
BspPI	GGATC	2 cut(s)	512, 994
BspTNI	GGTCTC	1 cut(s)	698
BsrDI	GCAATG	2 cut(s)	369, 1225
BsrFI	RCCGGY	1 cut(s)	134
BsrI	ACTGG	3 cut(s)	153, 357, 645
BssAI	RCCGGY	1 cut(s)	134
BssECI	CCNNGG	2 cut(s)	34, 1087
BssMI	GATC	3 cut(s)	487, 517, 986
BssSI	CACGAG	1 cut(s)	195
BssT1I	CCWWGG	1 cut(s)	1087
Bst2BI	CACGAG	1 cut(s)	195
Bst2UI	CCWGG	2 cut(s)	36, 558
Bst4CI	ACNGT	6 cut(s)	248, 468, 862, 1103, 1195, 1337
Bst6I	CTCTTC	3 cut(s)	798, 1287, 1443
BstAPI	GCANNNNNTGC	1 cut(s)	1487
BstC8I	GCNNGC	4 cut(s)	136, 1011, 1216, 1356
BstDEI	CTNAG	7 cut(s)	239, 761, 1014, 1044, 1362, 1506, 1592
BstENI	CCTNNNNNAGG	1 cut(s)	1086
BstF5I	GGATG	1 cut(s)	630
BstH2I	RGCGCY	1 cut(s)	311
BstHHI	GCGC	3 cut(s)	294, 310, 925
BstKTI	GATC	3 cut(s)	490, 520, 989
BstMAI	GTCTC	2 cut(s)	190, 698
BstMBI	GATC	3 cut(s)	487, 517, 986
BstMWI	GCNNNNNNNGC	7 cut(s)	1211, 1364, 1367, 1406, 1475, 1484, 1487
BstNI	CCWGG	2 cut(s)	36, 558
BstNSI	RCATGY	3 cut(s)	363, 378, 734
BstPAI	GACNNNNGTC	1 cut(s)	1101
BstSCI	CCNGG	2 cut(s)	34, 556
BstSFI	CTRYAG	4 cut(s)	588, 1404, 1479, 1555
BstV1I	GCAGC	9 cut(s)	343, 649, 1354, 1370, 1387, 1390, 1418, 1465, 1474
BstX2I	RGATCY	1 cut(s)	986
BstYI	RGATCY	1 cut(s)	986
BsuI	GTATCC	2 cut(s)	504, 1192
BsuRI	GGCC	3 cut(s)	138, 333, 1092
BtgZI	GCGATG	1 cut(s)	753
BtsCI	GGATG	1 cut(s)	630
BtsI	GCAGTG	1 cut(s)	597
BtsIMutI	CAGTG	3 cut(s)	597, 652, 1328
Cac8I	GCNNGC	4 cut(s)	136, 1011, 1216, 1356
CaiI	CAGNNNCTG	2 cut(s)	785, 1487
CfoI	GCGC	3 cut(s)	294, 310, 925
Cfr10I	RCCGGY	1 cut(s)	134
Cfr13I	GGNCC	1 cut(s)	331
Csp6I	GTAC	2 cut(s)	350, 1279
CspCI	CAANNNNNGTGG	4 cut(s)	889, 924, 1593, 1628
CviAII	CATG	7 cut(s)	360, 375, 610, 689, 731, 980, 1211
CviQI	GTAC	2 cut(s)	350, 1279
DdeI	CTNAG	7 cut(s)	239, 761, 1014, 1044, 1362, 1506, 1592
DpnI	GATC	3 cut(s)	489, 519, 988
DpnII	GATC	3 cut(s)	487, 517, 986
DraIII	CACNNNGTG	1 cut(s)	449
EaeI	YGGCCR	1 cut(s)	136
Eam1104I	CTCTTC	3 cut(s)	798, 1287, 1443
EarI	CTCTTC	3 cut(s)	798, 1287, 1443
Eco130I	CCWWGG	1 cut(s)	1087
Eco147I	AGGCCT	1 cut(s)	1092
Eco24I	GRGCYC	1 cut(s)	1189
Eco31I	GGTCTC	1 cut(s)	698
Eco57I	CTGAAG	2 cut(s)	126, 836
Eco88I	CYCGRG	1 cut(s)	1437
EcoNI	CCTNNNNNAGG	1 cut(s)	1086
EcoRII	CCWGG	2 cut(s)	34, 556
EcoT14I	CCWWGG	1 cut(s)	1087
EcoT38I	GRGCYC	1 cut(s)	1189
ErhI	CCWWGG	1 cut(s)	1087
FaeI	CATG	7 cut(s)	363, 378, 613, 692, 734, 983, 1214
FaqI	GGGAC	1 cut(s)	17
FatI	CATG	7 cut(s)	359, 374, 609, 688, 730, 979, 1210
FauI	CCCGC	1 cut(s)	1207
FbaI	TGATCA	1 cut(s)	487
FokI	GGATG	1 cut(s)	637
FriOI	GRGCYC	1 cut(s)	1189
FspBI	CTAG	7 cut(s)	446, 606, 1056, 1094, 1146, 1371, 1433
GlaI	GCGC	3 cut(s)	293, 309, 924
GsuI	CTGGAG	2 cut(s)	981, 1449
HaeII	RGCGCY	1 cut(s)	311
HaeIII	GGCC	3 cut(s)	138, 333, 1092
HapII	CCGG	1 cut(s)	135
HhaI	GCGC	3 cut(s)	294, 310, 925
Hin1II	CATG	7 cut(s)	363, 378, 613, 692, 734, 983, 1214
Hin6I	GCGC	3 cut(s)	292, 308, 923
HinP1I	GCGC	3 cut(s)	292, 308, 923
HincII	GTYRAC	2 cut(s)	750, 1106
HindII	GTYRAC	2 cut(s)	750, 1106
HinfI	GANTC	6 cut(s)	782, 1037, 1061, 1223, 1235, 1391
HpaII	CCGG	1 cut(s)	135
Hpy166II	GTNNAC	5 cut(s)	554, 750, 896, 974, 1106
Hpy188I	TCNGA	6 cut(s)	106, 712, 816, 1066, 1240, 1252
Hpy8I	GTNNAC	5 cut(s)	554, 750, 896, 974, 1106
HpyAV	CCTTC	5 cut(s)	531, 558, 811, 1020, 1504
HpyCH4III	ACNGT	6 cut(s)	248, 468, 862, 1103, 1195, 1337
HpyCH4IV	ACGT	1 cut(s)	746
HpyF10VI	GCNNNNNNNGC	7 cut(s)	1211, 1364, 1367, 1406, 1475, 1484, 1487
HpyF3I	CTNAG	7 cut(s)	239, 761, 1014, 1044, 1362, 1506, 1592
HpySE526I	ACGT	1 cut(s)	746
Hsp92II	CATG	7 cut(s)	363, 378, 613, 692, 734, 983, 1214
HspAI	GCGC	3 cut(s)	292, 308, 923
KroI	GCCGGC	1 cut(s)	134
KroNI	GCCGGC	1 cut(s)	136
Ksp22I	TGATCA	1 cut(s)	487
Kzo9I	GATC	3 cut(s)	487, 517, 986
LmnI	GCTCC	3 cut(s)	789, 1192, 1351
Lsp1109I	GCAGC	9 cut(s)	343, 649, 1354, 1370, 1387, 1390, 1418, 1465, 1474
LweI	GCATC	4 cut(s)	118, 224, 615, 730
MaeI	CTAG	7 cut(s)	446, 606, 1056, 1094, 1146, 1371, 1433
MaeII	ACGT	1 cut(s)	746
MaeIII	GTNAC	3 cut(s)	65, 958, 1058
MalI	GATC	3 cut(s)	489, 519, 988
MboI	GATC	3 cut(s)	487, 517, 986
MboII	GAAGA	9 cut(s)	56, 66, 119, 281, 392, 439, 815, 1304, 1460
MfeI	CAATTG	1 cut(s)	1605
MflI	RGATCY	1 cut(s)	986
MhlI	GDGCHC	1 cut(s)	1189
MlyI	GAGTC	3 cut(s)	1046, 1055, 1244
MroNI	GCCGGC	1 cut(s)	134
MseI	TTAA	2 cut(s)	230, 864
MslI	CAYNNNNRTG	1 cut(s)	608
MspA1I	CMGCKG	1 cut(s)	1205
MspI	CCGG	1 cut(s)	135
MspR9I	CCNGG	2 cut(s)	36, 558
MunI	CAATTG	1 cut(s)	1605
Mva1269I	GAATGC	1 cut(s)	1057
MvaI	CCWGG	2 cut(s)	36, 558
MwoI	GCNNNNNNNGC	7 cut(s)	1211, 1364, 1367, 1406, 1475, 1484, 1487
NaeI	GCCGGC	1 cut(s)	136
NdeII	GATC	3 cut(s)	487, 517, 986
NgoMIV	GCCGGC	1 cut(s)	134
NlaIII	CATG	7 cut(s)	363, 378, 613, 692, 734, 983, 1214
NlaIV	GGNNCC	3 cut(s)	332, 1188, 1378
NmeAIII	GCCGAG	1 cut(s)	167
NmuCI	GTSAC	3 cut(s)	65, 958, 1058
NspI	RCATGY	3 cut(s)	363, 378, 734
PaeR7I	CTCGAG	1 cut(s)	1437
PceI	AGGCCT	1 cut(s)	1092
PciI	ACATGT	1 cut(s)	730
PctI	GAATGC	1 cut(s)	1057
PdiI	GCCGGC	1 cut(s)	136
PfeI	GAWTC	3 cut(s)	782, 1223, 1391
PleI	GAGTC	3 cut(s)	1045, 1055, 1243
PpsI	GAGTC	3 cut(s)	1045, 1055, 1243
PscI	ACATGT	1 cut(s)	730
PshAI	GACNNNNGTC	1 cut(s)	1101
Psp1406I	AACGTT	1 cut(s)	746
Psp6I	CCWGG	2 cut(s)	34, 556
PspGI	CCWGG	2 cut(s)	34, 556
PspN4I	GGNNCC	3 cut(s)	332, 1188, 1378
PspPI	GGNCC	1 cut(s)	331
PspXI	VCTCGAGB	1 cut(s)	1437
PsrI	GAACNNNNNNTAC	2 cut(s)	1325, 1357
PstI	CTGCAG	3 cut(s)	592, 1408, 1483
PstNI	CAGNNNCTG	2 cut(s)	785, 1487
PsuI	RGATCY	1 cut(s)	986
PvuII	CAGCTG	1 cut(s)	1205
RsaI	GTAC	2 cut(s)	351, 1280
RsaNI	GTAC	2 cut(s)	350, 1279
RseI	CAYNNNNRTG	1 cut(s)	608
SaqAI	TTAA	2 cut(s)	230, 864
Sau3AI	GATC	3 cut(s)	487, 517, 986
Sau96I	GGNCC	1 cut(s)	331
ScaI	AGTACT	1 cut(s)	351
SchI	GAGTC	3 cut(s)	1046, 1055, 1244
ScrFI	CCNGG	2 cut(s)	36, 558
SduI	GDGCHC	1 cut(s)	1189
SfaNI	GCATC	4 cut(s)	118, 224, 615, 730
SfcI	CTRYAG	4 cut(s)	588, 1404, 1479, 1555
Sfr274I	CTCGAG	1 cut(s)	1437
SlaI	CTCGAG	1 cut(s)	1437
SmiMI	CAYNNNNRTG	1 cut(s)	608
SmlI	CTYRAG	6 cut(s)	311, 695, 1138, 1395, 1437, 1634
SmoI	CTYRAG	6 cut(s)	311, 695, 1138, 1395, 1437, 1634
SseBI	AGGCCT	1 cut(s)	1092
SsiI	CCGC	5 cut(s)	75, 132, 452, 757, 1214
SspI	AATATT	1 cut(s)	1540
SspMI	CTAG	7 cut(s)	446, 606, 1056, 1094, 1146, 1371, 1433
StuI	AGGCCT	1 cut(s)	1092
StyD4I	CCNGG	2 cut(s)	34, 556
StyI	CCWWGG	1 cut(s)	1087
TaaI	ACNGT	6 cut(s)	248, 468, 862, 1103, 1195, 1337
TaiI	ACGT	1 cut(s)	749
TaqI	TCGA	1 cut(s)	1438
TaqII	GACCGA	1 cut(s)	369
TatI	WGTACW	1 cut(s)	349
TauI	GCSGC	3 cut(s)	78, 134, 760
TfiI	GAWTC	3 cut(s)	782, 1223, 1391
Tru1I	TTAA	2 cut(s)	230, 864
Tru9I	TTAA	2 cut(s)	230, 864
TscAI	CASTG	3 cut(s)	597, 652, 1335
TseFI	GTSAC	3 cut(s)	65, 958, 1058
TseI	GCWGC	9 cut(s)	356, 662, 1358, 1367, 1400, 1403, 1406, 1478, 1487
Tsp45I	GTSAC	3 cut(s)	65, 958, 1058
TspDTI	ATGAA	7 cut(s)	240, 282, 626, 968, 1199, 1236, 1305
TspGWI	ACGGA	1 cut(s)	631
TspRI	CASTG	3 cut(s)	597, 652, 1335
XagI	CCTNNNNNAGG	1 cut(s)	1086
XapI	RAATTY	7 cut(s)	157, 319, 539, 767, 938, 1114, 1456
XceI	RCATGY	3 cut(s)	363, 378, 734
XhoI	CTCGAG	1 cut(s)	1437
XspI	CTAG	7 cut(s)	446, 606, 1056, 1094, 1146, 1371, 1433
ZrmI	AGTACT	1 cut(s)	351

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.