FvH4_4g23260

BAG family molecular chaperone regulator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0001749
Physical Location & Seq
Forward (+)
25808642 .. 25810118
1477 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g23260.t1

Sequence Viewer

Length: 888 bp
ATGGAATCTTTCTTCGATACCCCCCTGTACTACGGCTACACACCCTACTCTCAATATCAAGCCCCAATCCAACACCCCTATTATTCACTCAGAAACAGACAAGTCCCAGTTCAGCCCCAATCGGCCCGGGCTCCAAAGGTGGTCCCAATCCCGGTCCAATACGCCGCGCCGGAGCGTAGGCGGTATGACCTACGCTCCGACGCGGCGCTAAAGATCCAGAAGGCCTTCAGAGGATATCTGGTGAGAAAAAGCGTGACCAAGATCGCGGGGATCAATCGTGAGGTGGACGAGATTTCGGAGCGGGTTGCGAAAAAGGAGACGGCGGATTTGGTGAGAACCGACGCCAAGGAGCGGCTGAAGGTGGTGGAGACGCTGATGAGTCTGCTCCTGAAGCTGGATTCTGTGAAGGGAGTCGACTCCGGGGTTAGGGATTTGAGGAGGTCGGTGATTAAGAAGGCGATTGCGCTGCAGGAGAAGGTGGAGGCCTCTGCGGCAAATCATCAAACAGGTGGTGGGCATGAGTCTGCCGAGCCGGTGACTGATTCGGGTTTGGAATGTTCGGAAGAGAGTGCGGAGACGGGTGTGAATGAGAGGGAGTCATCTTTCAATTCAAGGGAAAGCAAGAATGGTGCGGAGATGCTAGATAAGATGGTGAAGGAGAATTCGAGGGAAAGCAAGAATGGTGAGGAGATGCTAGATAAGATGGTGAAGGAGAATCAGAGGATGGTGGGTTTGATGACGGAGCTGGTTCACCGGAATGAGAAGCAAACACGGCTGCTGGGGTCGCTGTCGCAGAGGGTGGAGATGCTGGAGAGGGCTCTCATCAATGAGAGATTGAGGAGGAAGAAGAGGAGGCAGTCTCTAGATTGCAGGGAAGATTTCTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005911 GO:0006457 GO:0008150 GO:0009266 GO:0009506 GO:0009605 GO:0009607 GO:0009628 GO:0009987 GO:0030054 GO:0043207 GO:0050896 GO:0055044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BAG IQ

Protein Analysis

296

Amino Acids

33.75

Weight (kDa)

9.31

Isoelectric Point (pI)

52.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BAG PF02179 88 - 162 6.5e-11 BAG domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 301, 352
AccI GTMKAC 1 cut(s) 414
AccII CGCG 3 cut(s) 167, 203, 266
AclWI GGATC 2 cut(s) 208, 278
AcsI RAATTY 1 cut(s) 661
AcuI CTGAAG 3 cut(s) 211, 377, 410
AcyI GRCGYC 1 cut(s) 342
AfaI GTAC 1 cut(s) 29
AfiI CCNNNNNNNGG 4 cut(s) 151, 351, 394, 426
AgsI TTSAA 2 cut(s) 607, 612
AluBI AGCT 2 cut(s) 394, 745
AluI AGCT 2 cut(s) 394, 745
Alw26I GTCTC 4 cut(s) 311, 362, 569, 864
AlwI GGATC 2 cut(s) 208, 278
Ama87I CYCGRG 1 cut(s) 126
AoxI GGCC 3 cut(s) 123, 222, 483
ApeKI GCWGC 2 cut(s) 466, 775
ApoI RAATTY 1 cut(s) 661
ArsI GACNNNNNNTTYG 2 cut(s) 310, 342
Asp700I GAANNNNTTC 1 cut(s) 224
AspLEI GCGC 3 cut(s) 169, 208, 466
AspS9I GGNCC 3 cut(s) 124, 142, 154
AsuC2I CCSGG 4 cut(s) 127, 128, 152, 421
AsuHPI GGTGA 8 cut(s) 253, 343, 457, 547, 664, 695, 718, 743
AvaI CYCGRG 1 cut(s) 126
AvaII GGWCC 2 cut(s) 142, 154
BanII GRGCYC 2 cut(s) 133, 820
BbvI GCAGC 2 cut(s) 453, 762
BccI CCATC 3 cut(s) 643, 697, 718
BceAI ACGGC 3 cut(s) 49, 336, 788
BcgI CGANNNNNNTGC 2 cut(s) 448, 482
BcnI CCSGG 4 cut(s) 127, 128, 152, 421
BcoDI GTCTC 4 cut(s) 311, 362, 569, 864
BfaI CTAG 4 cut(s) 641, 695, 863, 886
BfmI CTRYAG 1 cut(s) 467
BfoI RGCGCY 1 cut(s) 209
BglI GCCNNNNNGGC 1 cut(s) 491
BisI GCNGC 6 cut(s) 165, 204, 353, 467, 492, 776
BlsI GCNGC 6 cut(s) 166, 205, 354, 468, 493, 777
Bme1390I CCNGG 4 cut(s) 127, 128, 152, 421
Bme18I GGWCC 2 cut(s) 142, 154
BmeT110I CYCGRG 1 cut(s) 126
BmgT120I GGNCC 3 cut(s) 124, 142, 154
BmiI GGNNCC 2 cut(s) 132, 144
BmrFI CCNGG 4 cut(s) 127, 128, 152, 421
BmrI ACTGGG 1 cut(s) 101
BmsI GCATC 3 cut(s) 627, 681, 795
BmuI ACTGGG 1 cut(s) 101
BplI GAGNNNNNCTC 2 cut(s) 844, 876
BpmI CTGGAG 1 cut(s) 830
BpuMI CCSGG 4 cut(s) 127, 128, 152, 421
BsaHI GRCGYC 1 cut(s) 342
BsaJI CCNNGG 3 cut(s) 126, 345, 420
BsaWI WCCGGW 1 cut(s) 753
BsaXI ACNNNNNCTCC 2 cut(s) 179, 209
Bsc4I CCNNNNNNNGG 4 cut(s) 151, 351, 394, 426
Bse118I RCCGGY 1 cut(s) 532
Bse1I ACTGG 1 cut(s) 107
BseDI CCNNGG 3 cut(s) 126, 345, 420
BseGI GGATG 1 cut(s) 729
BseLI CCNNNNNNNGG 4 cut(s) 151, 351, 394, 426
BseMII CTCAG 1 cut(s) 103
BseNI ACTGG 1 cut(s) 107
BseRI GAGGAG 4 cut(s) 451, 701, 853, 865
BseXI GCAGC 2 cut(s) 453, 762
BseYI CCCAGC 1 cut(s) 778
Bsh1236I CGCG 3 cut(s) 167, 203, 266
BshFI GGCC 3 cut(s) 125, 224, 485
BsiHKCI CYCGRG 1 cut(s) 126
BsiSI CCGG 6 cut(s) 127, 152, 170, 420, 533, 754
BslFI GGGAC 2 cut(s) 89, 128
BslI CCNNNNNNNGG 4 cut(s) 151, 351, 394, 426
BsmAI GTCTC 4 cut(s) 311, 362, 569, 864
BsmBI CGTCTC 3 cut(s) 311, 362, 569
BsmFI GGGAC 2 cut(s) 89, 128
BsnI GGCC 3 cut(s) 125, 224, 485
BsoBI CYCGRG 1 cut(s) 126
Bsp1286I GDGCHC 2 cut(s) 133, 820
Bsp143I GATC 3 cut(s) 213, 261, 270
BspANI GGCC 3 cut(s) 125, 224, 485
BspCNI CTCAG 1 cut(s) 102
BspFNI CGCG 3 cut(s) 167, 203, 266
BspLI GGNNCC 2 cut(s) 132, 144
BspMAI CTGCAG 1 cut(s) 471
BspPI GGATC 2 cut(s) 208, 278
BsrBI CCGCTC 2 cut(s) 301, 352
BsrFI RCCGGY 1 cut(s) 532
BsrI ACTGG 1 cut(s) 107
BssAI RCCGGY 1 cut(s) 532
BssECI CCNNGG 3 cut(s) 126, 345, 420
BssMI GATC 3 cut(s) 213, 261, 270
BssNI GRCGYC 1 cut(s) 342
BssT1I CCWWGG 1 cut(s) 345
Bst6I CTCTTC 2 cut(s) 558, 842
BstACI GRCGYC 1 cut(s) 342
BstDEI CTNAG 1 cut(s) 89
BstF5I GGATG 1 cut(s) 729
BstFNI CGCG 3 cut(s) 167, 203, 266
BstH2I RGCGCY 1 cut(s) 209
BstHHI GCGC 3 cut(s) 169, 208, 466
BstKTI GATC 3 cut(s) 216, 264, 273
BstMAI GTCTC 4 cut(s) 311, 362, 569, 864
BstMBI GATC 3 cut(s) 213, 261, 270
BstMWI GCNNNNNNNGC 4 cut(s) 391, 491, 772, 784
BstSCI CCNGG 4 cut(s) 125, 126, 150, 419
BstSFI CTRYAG 1 cut(s) 467
BstUI CGCG 3 cut(s) 167, 203, 266
BstV1I GCAGC 2 cut(s) 453, 762
BstX2I RGATCY 1 cut(s) 213
BstYI RGATCY 1 cut(s) 213
BsuRI GGCC 3 cut(s) 125, 224, 485
BtsCI GGATG 1 cut(s) 729
CfoI GCGC 3 cut(s) 169, 208, 466
Cfr10I RCCGGY 1 cut(s) 532
Cfr13I GGNCC 3 cut(s) 124, 142, 154
Cfr9I CCCGGG 1 cut(s) 126
CseI GACGC 3 cut(s) 209, 350, 379
Csp6I GTAC 1 cut(s) 28
CviAII CATG 1 cut(s) 518
CviQI GTAC 1 cut(s) 28
DdeI CTNAG 1 cut(s) 89
DpnI GATC 3 cut(s) 215, 263, 272
DpnII GATC 3 cut(s) 213, 261, 270
Eam1104I CTCTTC 2 cut(s) 558, 842
EarI CTCTTC 2 cut(s) 558, 842
EciI GGCGGA 1 cut(s) 338
Eco130I CCWWGG 1 cut(s) 345
Eco147I AGGCCT 2 cut(s) 224, 485
Eco24I GRGCYC 2 cut(s) 133, 820
Eco32I GATATC 1 cut(s) 236
Eco47I GGWCC 2 cut(s) 142, 154
Eco57I CTGAAG 3 cut(s) 211, 377, 410
Eco88I CYCGRG 1 cut(s) 126
EcoRI GAATTC 1 cut(s) 661
EcoRV GATATC 1 cut(s) 236
EcoT14I CCWWGG 1 cut(s) 345
EcoT38I GRGCYC 2 cut(s) 133, 820
ErhI CCWWGG 1 cut(s) 345
Esp3I CGTCTC 3 cut(s) 311, 362, 569
FaeI CATG 1 cut(s) 521
FaiI YATR 2 cut(s) 186, 519
FaqI GGGAC 2 cut(s) 89, 128
FatI CATG 1 cut(s) 517
FauI CCCGC 2 cut(s) 259, 294
FblI GTMKAC 1 cut(s) 414
Fnu4HI GCNGC 6 cut(s) 165, 204, 353, 467, 492, 776
FokI GGATG 1 cut(s) 736
FriOI GRGCYC 2 cut(s) 133, 820
Fsp4HI GCNGC 6 cut(s) 165, 204, 353, 467, 492, 776
FspBI CTAG 4 cut(s) 641, 695, 863, 886
GlaI GCGC 3 cut(s) 168, 207, 465
GluI GCNGC 6 cut(s) 165, 204, 353, 467, 492, 776
GsaI CCCAGC 1 cut(s) 782
GsuI CTGGAG 1 cut(s) 830
HaeII RGCGCY 1 cut(s) 209
HaeIII GGCC 3 cut(s) 125, 224, 485
HapII CCGG 6 cut(s) 127, 152, 170, 420, 533, 754
HgaI GACGC 3 cut(s) 209, 350, 379
HhaI GCGC 3 cut(s) 169, 208, 466
Hin1I GRCGYC 1 cut(s) 342
Hin1II CATG 1 cut(s) 521
Hin6I GCGC 3 cut(s) 167, 206, 464
HinP1I GCGC 3 cut(s) 167, 206, 464
HincII GTYRAC 1 cut(s) 415
HindII GTYRAC 1 cut(s) 415
HinfI GANTC 9 cut(s) 5, 379, 398, 411, 416, 521, 542, 596, 715
HpaII CCGG 6 cut(s) 127, 152, 170, 420, 533, 754
HphI GGTGA 8 cut(s) 253, 343, 457, 547, 664, 695, 718, 743
Hpy166II GTNNAC 3 cut(s) 286, 415, 751
Hpy188I TCNGA 6 cut(s) 92, 199, 230, 298, 562, 720
Hpy188III TCNNGA 4 cut(s) 217, 278, 388, 863
Hpy8I GTNNAC 3 cut(s) 286, 415, 751
Hpy99I CGWCG 2 cut(s) 203, 344
HpyAV CCTTC 8 cut(s) 214, 235, 352, 400, 448, 469, 649, 703
HpyCH4V TGCA 2 cut(s) 469, 870
HpyF10VI GCNNNNNNNGC 4 cut(s) 391, 491, 772, 784
HpyF3I CTNAG 1 cut(s) 89
Hsp92I GRCGYC 1 cut(s) 342
Hsp92II CATG 1 cut(s) 521
HspAI GCGC 3 cut(s) 167, 206, 464
Kzo9I GATC 3 cut(s) 213, 261, 270
LmnI GCTCC 7 cut(s) 136, 172, 200, 298, 349, 390, 742
Lsp1109I GCAGC 2 cut(s) 453, 762
LweI GCATC 3 cut(s) 627, 681, 795
MaeI CTAG 4 cut(s) 641, 695, 863, 886
MaeIII GTNAC 2 cut(s) 253, 535
MalI GATC 3 cut(s) 215, 263, 272
MbiI CCGCTC 2 cut(s) 301, 352
MboI GATC 3 cut(s) 213, 261, 270
MboII GAAGA 6 cut(s) 4, 575, 856, 859, 874, 887
MflI RGATCY 1 cut(s) 213
MhlI GDGCHC 2 cut(s) 133, 820
MluCI AATT 2 cut(s) 607, 661
MlyI GAGTC 5 cut(s) 388, 410, 420, 530, 605
MmeI TCCRAC 2 cut(s) 94, 222
MroXI GAANNNNTTC 1 cut(s) 224
MseI TTAA 1 cut(s) 450
MslI CAYNNNNRTG 1 cut(s) 756
MspI CCGG 6 cut(s) 127, 152, 170, 420, 533, 754
MspR9I CCNGG 4 cut(s) 127, 128, 152, 421
MvnI CGCG 3 cut(s) 167, 203, 266
MwoI GCNNNNNNNGC 4 cut(s) 391, 491, 772, 784
NciI CCSGG 4 cut(s) 127, 128, 152, 421
NdeII GATC 3 cut(s) 213, 261, 270
NlaIII CATG 1 cut(s) 521
NlaIV GGNNCC 2 cut(s) 132, 144
NmeAIII GCCGAG 1 cut(s) 553
NmuCI GTSAC 2 cut(s) 253, 535
PceI AGGCCT 2 cut(s) 224, 485
PdmI GAANNNNTTC 1 cut(s) 224
PfeI GAWTC 4 cut(s) 5, 398, 542, 715
PkrI GCNGC 6 cut(s) 166, 205, 354, 468, 493, 777
PleI GAGTC 5 cut(s) 387, 410, 419, 529, 604
PpsI GAGTC 5 cut(s) 387, 410, 419, 529, 604
PspFI CCCAGC 1 cut(s) 778
PspN4I GGNNCC 2 cut(s) 132, 144
PspPI GGNCC 3 cut(s) 124, 142, 154
PstI CTGCAG 1 cut(s) 471
PsuI RGATCY 1 cut(s) 213
RsaI GTAC 1 cut(s) 29
RsaNI GTAC 1 cut(s) 28
RseI CAYNNNNRTG 1 cut(s) 756
SalI GTCGAC 1 cut(s) 413
SaqAI TTAA 1 cut(s) 450
SatI GCNGC 6 cut(s) 165, 204, 353, 467, 492, 776
Sau3AI GATC 3 cut(s) 213, 261, 270
Sau96I GGNCC 3 cut(s) 124, 142, 154
SchI GAGTC 5 cut(s) 388, 410, 420, 530, 605
ScrFI CCNGG 4 cut(s) 127, 128, 152, 421
SduI GDGCHC 2 cut(s) 133, 820
SetI ASST 9 cut(s) 141, 192, 285, 363, 396, 443, 480, 511, 747
SfaNI GCATC 3 cut(s) 627, 681, 795
SfcI CTRYAG 1 cut(s) 467
SinI GGWCC 2 cut(s) 142, 154
SmaI CCCGGG 1 cut(s) 128
SmiMI CAYNNNNRTG 1 cut(s) 756
SrfI GCCCGGGC 1 cut(s) 128
Sse9I AATT 2 cut(s) 607, 661
SseBI AGGCCT 2 cut(s) 224, 485
SspMI CTAG 4 cut(s) 641, 695, 863, 886
StuI AGGCCT 2 cut(s) 224, 485
StyD4I CCNGG 4 cut(s) 125, 126, 150, 419
StyI CCWWGG 1 cut(s) 345
TaqI TCGA 3 cut(s) 15, 414, 665
TasI AATT 2 cut(s) 607, 661
TatI WGTACW 1 cut(s) 27
TauI GCSGC 4 cut(s) 167, 206, 355, 494
TfiI GAWTC 4 cut(s) 5, 398, 542, 715
Tru1I TTAA 1 cut(s) 450
Tru9I TTAA 1 cut(s) 450
TseFI GTSAC 2 cut(s) 253, 535
TseI GCWGC 2 cut(s) 466, 775
Tsp45I GTSAC 2 cut(s) 253, 535
TspGWI ACGGA 1 cut(s) 755
TspMI CCCGGG 1 cut(s) 126
VpaK11BI GGWCC 2 cut(s) 142, 154
XapI RAATTY 1 cut(s) 661
XbaI TCTAGA 1 cut(s) 862
XmaI CCCGGG 1 cut(s) 126
XmiI GTMKAC 1 cut(s) 414
XmnI GAANNNNTTC 1 cut(s) 224
XspI CTAG 4 cut(s) 641, 695, 863, 886
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.