RchiOBHm_Chr7g0203061

BAG family molecular chaperone regulator 5

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0001749
Physical Location & Seq
Reverse (-)
20738147 .. 20738674
528 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ18173

Sequence Viewer

Length: 528 bp
ATGGTTTGCGGCCTCTACAAGACAATCGCGACCGTCCATTCCGAGGCCGACGAGTTCCAGCACCTGATCCAACGGCAGGAGAAGGTCGACGCCTTAAGGAGCAGTGTGCAGGAGAAGCTGAGGATGAACGAGGCGCTGATGAAGTTGCTACTGAGTTTGGACTCCGTGACCGGGGTGGACCCCACGGTGAGGGAGGCAAGGAGGAAGGTGAGCCGTCAGATTGTGGGGCTGCAGGAGATCGTGGACGCGATTGTTCAGGAAGACATGGAGGGGTTCTGGGGTGGGTGCAGCGGTGGGTTTGGGAGGGACTACTGGAACGACGTCGTGGCGGAGATGGAGGAGGGGTGGTGTAGGGAGAGAGGAGGTGAGGAAATGGAGAGGTTTTCTGCTGAGTATTTGGGGTTTCGCTGCCGAAAATTTCCAATCCAGATCCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTAATTAATAGGGGCAAAATTGTCAGTAGATATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005911 GO:0006457 GO:0008150 GO:0009266 GO:0009506 GO:0009605 GO:0009607 GO:0009628 GO:0009987 GO:0030054 GO:0043207 GO:0050896 GO:0055044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BAG IQ

Protein Analysis

175

Amino Acids

20.68

Weight (kDa)

5.68

Isoelectric Point (pI)

30.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BAG PF02179 9 - 83 1.1e-13 BAG domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 324
AccI GTMKAC 1 cut(s) 87
AccII CGCG 2 cut(s) 29, 248
AciI CCGC 3 cut(s) 9, 291, 329
AclWI GGATC 2 cut(s) 61, 424
AcsI RAATTY 1 cut(s) 416
AcyI GRCGYC 2 cut(s) 90, 321
AfiI CCNNNNNNNGG 4 cut(s) 43, 76, 171, 189
AflII CTTAAG 1 cut(s) 94
AluBI AGCT 1 cut(s) 118
AluI AGCT 1 cut(s) 118
AlwI GGATC 2 cut(s) 61, 424
AlwNI CAGNNNCTG 1 cut(s) 64
AoxI GGCC 2 cut(s) 10, 45
ApeKI GCWGC 3 cut(s) 229, 288, 408
ApoI RAATTY 1 cut(s) 416
AseI ATTAAT 1 cut(s) 498
AspLEI GCGC 1 cut(s) 136
AspS9I GGNCC 1 cut(s) 178
AsuC2I CCSGG 1 cut(s) 172
AsuHPI GGTGA 3 cut(s) 199, 220, 377
AvaII GGWCC 1 cut(s) 178
BbsI GAAGAC 1 cut(s) 267
BbvCI CCTCAGC 1 cut(s) 119
BbvI GCAGC 3 cut(s) 216, 300, 395
BccI CCATC 1 cut(s) 328
BceAI ACGGC 2 cut(s) 89, 198
BcnI CCSGG 1 cut(s) 172
BfmI CTRYAG 1 cut(s) 230
BfoI RGCGCY 1 cut(s) 137
BfrI CTTAAG 1 cut(s) 94
BisI GCNGC 4 cut(s) 10, 230, 289, 409
BlsI GCNGC 4 cut(s) 11, 231, 290, 410
Bme1390I CCNGG 1 cut(s) 172
Bme18I GGWCC 1 cut(s) 178
BmgT120I GGNCC 1 cut(s) 178
BmiI GGNNCC 1 cut(s) 180
BmrFI CCNGG 1 cut(s) 172
BpiI GAAGAC 1 cut(s) 267
Bpu10I CCTNAGC 1 cut(s) 119
BpuMI CCSGG 1 cut(s) 172
BsaHI GRCGYC 2 cut(s) 90, 321
BsaJI CCNNGG 3 cut(s) 42, 171, 183
BsaXI ACNNNNNCTCC 4 cut(s) 329, 332, 359, 362
Bsc4I CCNNNNNNNGG 4 cut(s) 43, 76, 171, 189
Bse1I ACTGG 1 cut(s) 317
BseDI CCNNGG 3 cut(s) 42, 171, 183
BseGI GGATG 1 cut(s) 129
BseLI CCNNNNNNNGG 4 cut(s) 43, 76, 171, 189
BseMII CTCAG 3 cut(s) 110, 143, 381
BseNI ACTGG 1 cut(s) 317
BseRI GAGGAG 2 cut(s) 353, 375
BseXI GCAGC 3 cut(s) 216, 300, 395
BsgI GTGCAG 2 cut(s) 128, 307
Bsh1236I CGCG 2 cut(s) 29, 248
Bsh1285I CGRYCG 1 cut(s) 33
BshFI GGCC 2 cut(s) 12, 47
BsiEI CGRYCG 1 cut(s) 33
BsiSI CCGG 1 cut(s) 171
BslFI GGGAC 1 cut(s) 320
BslI CCNNNNNNNGG 4 cut(s) 43, 76, 171, 189
BsmFI GGGAC 1 cut(s) 320
BsnI GGCC 2 cut(s) 12, 47
Bsp143I GATC 3 cut(s) 66, 237, 429
Bsp68I TCGCGA 1 cut(s) 29
BspACI CCGC 3 cut(s) 9, 291, 329
BspANI GGCC 2 cut(s) 12, 47
BspCNI CTCAG 3 cut(s) 111, 144, 382
BspFNI CGCG 2 cut(s) 29, 248
BspLI GGNNCC 1 cut(s) 180
BspMAI CTGCAG 1 cut(s) 234
BspPI GGATC 2 cut(s) 61, 424
BspTI CTTAAG 1 cut(s) 94
BsrI ACTGG 1 cut(s) 317
BssECI CCNNGG 3 cut(s) 42, 171, 183
BssMI GATC 3 cut(s) 66, 237, 429
BssNI GRCGYC 2 cut(s) 90, 321
Bst4CI ACNGT 2 cut(s) 34, 187
BstACI GRCGYC 2 cut(s) 90, 321
BstAFI CTTAAG 1 cut(s) 94
BstDEI CTNAG 3 cut(s) 119, 152, 390
BstDSI CCRYGG 1 cut(s) 183
BstF5I GGATG 1 cut(s) 129
BstFNI CGCG 2 cut(s) 29, 248
BstH2I RGCGCY 1 cut(s) 137
BstHHI GCGC 1 cut(s) 136
BstKTI GATC 3 cut(s) 69, 240, 432
BstMBI GATC 3 cut(s) 66, 237, 429
BstMCI CGRYCG 1 cut(s) 33
BstMWI GCNNNNNNNGC 1 cut(s) 115
BstSCI CCNGG 1 cut(s) 170
BstSFI CTRYAG 1 cut(s) 230
BstUI CGCG 2 cut(s) 29, 248
BstV1I GCAGC 3 cut(s) 216, 300, 395
BstV2I GAAGAC 1 cut(s) 267
BstX2I RGATCY 1 cut(s) 429
BstYI RGATCY 1 cut(s) 429
BsuRI GGCC 2 cut(s) 12, 47
BtgI CCRYGG 1 cut(s) 183
BtsCI GGATG 1 cut(s) 129
BtsI GCAGTG 1 cut(s) 109
BtsIMutI CAGTG 1 cut(s) 109
BtuMI TCGCGA 1 cut(s) 29
CaiI CAGNNNCTG 1 cut(s) 64
CfoI GCGC 1 cut(s) 136
Cfr13I GGNCC 1 cut(s) 178
CseI GACGC 2 cut(s) 98, 254
CviAII CATG 1 cut(s) 265
CviJI RGCY 5 cut(s) 12, 47, 118, 213, 229
CviKI_1 RGCY 5 cut(s) 12, 47, 118, 213, 229
DdeI CTNAG 3 cut(s) 119, 152, 390
DpnI GATC 3 cut(s) 68, 239, 431
DpnII GATC 3 cut(s) 66, 237, 429
EciI GGCGGA 1 cut(s) 344
Eco47I GGWCC 1 cut(s) 178
FaeI CATG 1 cut(s) 268
FaiI YATR 1 cut(s) 266
FaqI GGGAC 1 cut(s) 320
FatI CATG 1 cut(s) 264
FblI GTMKAC 1 cut(s) 87
Fnu4HI GCNGC 4 cut(s) 10, 230, 289, 409
FokI GGATG 1 cut(s) 136
Fsp4HI GCNGC 4 cut(s) 10, 230, 289, 409
GlaI GCGC 1 cut(s) 135
GluI GCNGC 4 cut(s) 10, 230, 289, 409
HaeII RGCGCY 1 cut(s) 137
HaeIII GGCC 2 cut(s) 12, 47
HapII CCGG 1 cut(s) 171
HgaI GACGC 2 cut(s) 98, 254
HhaI GCGC 1 cut(s) 136
Hin1I GRCGYC 2 cut(s) 90, 321
Hin1II CATG 1 cut(s) 268
Hin6I GCGC 1 cut(s) 134
HinP1I GCGC 1 cut(s) 134
HincII GTYRAC 1 cut(s) 88
HindII GTYRAC 1 cut(s) 88
HinfI GANTC 1 cut(s) 161
HpaII CCGG 1 cut(s) 171
HphI GGTGA 3 cut(s) 199, 220, 377
Hpy166II GTNNAC 3 cut(s) 88, 178, 244
Hpy188I TCNGA 3 cut(s) 43, 219, 434
Hpy188III TCNNGA 3 cut(s) 28, 257, 427
Hpy8I GTNNAC 3 cut(s) 88, 178, 244
Hpy99I CGWCG 4 cut(s) 53, 92, 323, 326
HpyAV CCTTC 2 cut(s) 76, 199
HpyCH4III ACNGT 2 cut(s) 34, 187
HpyCH4IV ACGT 1 cut(s) 321
HpyCH4V TGCA 3 cut(s) 109, 232, 288
HpyF10VI GCNNNNNNNGC 1 cut(s) 115
HpyF3I CTNAG 3 cut(s) 119, 152, 390
HpySE526I ACGT 1 cut(s) 321
Hsp92I GRCGYC 2 cut(s) 90, 321
Hsp92II CATG 1 cut(s) 268
HspAI GCGC 1 cut(s) 134
Kzo9I GATC 3 cut(s) 66, 237, 429
LmnI GCTCC 1 cut(s) 99
Lsp1109I GCAGC 3 cut(s) 216, 300, 395
MaeII ACGT 1 cut(s) 321
MaeIII GTNAC 1 cut(s) 166
MalI GATC 3 cut(s) 68, 239, 431
MboI GATC 3 cut(s) 66, 237, 429
MboII GAAGA 1 cut(s) 272
MflI RGATCY 1 cut(s) 429
MluCI AATT 3 cut(s) 416, 495, 510
MlyI GAGTC 1 cut(s) 155
MmeI TCCRAC 1 cut(s) 94
MseI TTAA 3 cut(s) 95, 494, 498
MspA1I CMGCKG 1 cut(s) 291
MspCI CTTAAG 1 cut(s) 94
MspI CCGG 1 cut(s) 171
MspR9I CCNGG 1 cut(s) 172
MvnI CGCG 2 cut(s) 29, 248
MwoI GCNNNNNNNGC 1 cut(s) 115
NciI CCSGG 1 cut(s) 172
NdeII GATC 3 cut(s) 66, 237, 429
NlaIII CATG 1 cut(s) 268
NlaIV GGNNCC 1 cut(s) 180
NmuCI GTSAC 1 cut(s) 166
NruI TCGCGA 1 cut(s) 29
PacI TTAATTAA 1 cut(s) 498
PkrI GCNGC 4 cut(s) 11, 231, 290, 410
PleI GAGTC 1 cut(s) 155
PpsI GAGTC 1 cut(s) 155
PshBI ATTAAT 1 cut(s) 498
PspN4I GGNNCC 1 cut(s) 180
PspPI GGNCC 1 cut(s) 178
PstI CTGCAG 1 cut(s) 234
PstNI CAGNNNCTG 1 cut(s) 64
PsuI RGATCY 1 cut(s) 429
RruI TCGCGA 1 cut(s) 29
SalI GTCGAC 1 cut(s) 86
SaqAI TTAA 3 cut(s) 95, 494, 498
SatI GCNGC 4 cut(s) 10, 230, 289, 409
Sau3AI GATC 3 cut(s) 66, 237, 429
Sau96I GGNCC 1 cut(s) 178
SchI GAGTC 1 cut(s) 155
ScrFI CCNGG 1 cut(s) 172
SetI ASST 7 cut(s) 66, 87, 120, 210, 324, 367, 383
SfcI CTRYAG 1 cut(s) 230
SinI GGWCC 1 cut(s) 178
SmlI CTYRAG 1 cut(s) 94
SmoI CTYRAG 1 cut(s) 94
Sse9I AATT 3 cut(s) 416, 495, 510
SsiI CCGC 3 cut(s) 9, 291, 329
StyD4I CCNGG 1 cut(s) 170
TaaI ACNGT 2 cut(s) 34, 187
TaiI ACGT 1 cut(s) 324
TaqI TCGA 1 cut(s) 87
TasI AATT 3 cut(s) 416, 495, 510
TauI GCSGC 1 cut(s) 12
Tru1I TTAA 3 cut(s) 95, 494, 498
Tru9I TTAA 3 cut(s) 95, 494, 498
TscAI CASTG 1 cut(s) 109
TseFI GTSAC 1 cut(s) 166
TseI GCWGC 3 cut(s) 229, 288, 408
Tsp45I GTSAC 1 cut(s) 166
TspDTI ATGAA 2 cut(s) 140, 155
TspGWI ACGGA 1 cut(s) 154
TspRI CASTG 1 cut(s) 109
Vha464I CTTAAG 1 cut(s) 94
VpaK11BI GGWCC 1 cut(s) 178
VspI ATTAAT 1 cut(s) 498
XapI RAATTY 1 cut(s) 416
XmiI GTMKAC 1 cut(s) 87
ZraI GACGTC 1 cut(s) 322
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.