MD17G1165100.v1.1

BAG family molecular chaperone regulator 5

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0001749
Physical Location & Seq
Reverse (-)
16383769 .. 16384023
255 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1165100.v1.1.491

Sequence Viewer

Length: 255 bp
ATGAACGAGTCCCTGATGCGGCTGCTGCTGAAGCTGGACTCGGACCCCACGGTGAGGGAAGCGAGGAGAAAGGTGAGCCGTTGGATCGTGGACGCAATCGTATCAGAAAACGTGGATGGCTTCTGGGGTAGCAGAGACGATGGGTTTGGAAGGAACTGGGACGACATCCTTGCGGAGATGAAGGAGGAGGCGTGCAGGGACAAAGGAGGGGAAGAGATGGAGAGGTTTTGCGCTCAGTATATGGGGTTTTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005911 GO:0006457 GO:0008150 GO:0009266 GO:0009506 GO:0009605 GO:0009607 GO:0009628 GO:0009987 GO:0030054 GO:0043207 GO:0050896 GO:0055044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BAG IQ

Protein Analysis

85

Amino Acids

9.83

Weight (kDa)

4.69

Isoelectric Point (pI)

42.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 19, 173
AclWI GGATC 1 cut(s) 92
AcuI CTGAAG 1 cut(s) 50
AfiI CCNNNNNNNGG 2 cut(s) 18, 54
AluBI AGCT 1 cut(s) 34
AluI AGCT 1 cut(s) 34
Alw26I GTCTC 1 cut(s) 129
AlwI GGATC 1 cut(s) 92
ApeKI GCWGC 2 cut(s) 22, 25
ArsI GACNNNNNNTTYG 2 cut(s) 128, 160
AspLEI GCGC 1 cut(s) 233
AspS9I GGNCC 1 cut(s) 43
AsuHPI GGTGA 2 cut(s) 64, 85
AvaII GGWCC 1 cut(s) 43
BbvI GCAGC 2 cut(s) 9, 12
BccI CCATC 3 cut(s) 110, 134, 211
BceAI ACGGC 1 cut(s) 63
BcgI CGANNNNNNTGC 2 cut(s) 152, 186
BcoDI GTCTC 1 cut(s) 129
BfaI CTAG 1 cut(s) 253
BisI GCNGC 3 cut(s) 20, 23, 26
BlsI GCNGC 3 cut(s) 21, 24, 27
Bme18I GGWCC 1 cut(s) 43
BmgT120I GGNCC 1 cut(s) 43
BmiI GGNNCC 1 cut(s) 45
BmrI ACTGGG 1 cut(s) 166
BmsI GCATC 1 cut(s) 6
BmuI ACTGGG 1 cut(s) 166
BsaJI CCNNGG 1 cut(s) 48
BsaXI ACNNNNNCTCC 2 cut(s) 176, 206
Bsc4I CCNNNNNNNGG 2 cut(s) 18, 54
Bse1I ACTGG 1 cut(s) 161
BseDI CCNNGG 1 cut(s) 48
BseGI GGATG 2 cut(s) 121, 165
BseLI CCNNNNNNNGG 2 cut(s) 18, 54
BseMII CTCAG 1 cut(s) 248
BseNI ACTGG 1 cut(s) 161
BseRI GAGGAG 2 cut(s) 79, 200
BseXI GCAGC 2 cut(s) 9, 12
BsgI GTGCAG 1 cut(s) 214
BslFI GGGAC 2 cut(s) 173, 212
BslI CCNNNNNNNGG 2 cut(s) 18, 54
BsmAI GTCTC 1 cut(s) 129
BsmBI CGTCTC 1 cut(s) 129
BsmFI GGGAC 2 cut(s) 173, 212
Bsp143I GATC 1 cut(s) 84
BspACI CCGC 2 cut(s) 19, 173
BspCNI CTCAG 1 cut(s) 247
BspLI GGNNCC 1 cut(s) 45
BspPI GGATC 1 cut(s) 92
BsrI ACTGG 1 cut(s) 161
BssECI CCNNGG 1 cut(s) 48
BssMI GATC 1 cut(s) 84
Bst4CI ACNGT 1 cut(s) 52
Bst6I CTCTTC 1 cut(s) 207
BstC8I GCNNGC 1 cut(s) 193
BstDEI CTNAG 1 cut(s) 234
BstDSI CCRYGG 1 cut(s) 48
BstF5I GGATG 2 cut(s) 121, 165
BstHHI GCGC 1 cut(s) 233
BstKTI GATC 1 cut(s) 87
BstMAI GTCTC 1 cut(s) 129
BstMBI GATC 1 cut(s) 84
BstMWI GCNNNNNNNGC 2 cut(s) 25, 31
BstV1I GCAGC 2 cut(s) 9, 12
BtgI CCRYGG 1 cut(s) 48
BtsCI GGATG 2 cut(s) 121, 165
Cac8I GCNNGC 1 cut(s) 193
CfoI GCGC 1 cut(s) 233
Cfr13I GGNCC 1 cut(s) 43
CseI GACGC 1 cut(s) 101
CviJI RGCY 4 cut(s) 22, 34, 78, 120
CviKI_1 RGCY 4 cut(s) 22, 34, 78, 120
DdeI CTNAG 1 cut(s) 234
DpnI GATC 1 cut(s) 86
DpnII GATC 1 cut(s) 84
Eam1104I CTCTTC 1 cut(s) 207
EarI CTCTTC 1 cut(s) 207
Eco47I GGWCC 1 cut(s) 43
Eco57I CTGAAG 1 cut(s) 50
Esp3I CGTCTC 1 cut(s) 129
FaiI YATR 2 cut(s) 240, 242
FaqI GGGAC 2 cut(s) 173, 212
Fnu4HI GCNGC 3 cut(s) 20, 23, 26
FokI GGATG 2 cut(s) 128, 152
Fsp4HI GCNGC 3 cut(s) 20, 23, 26
FspBI CTAG 1 cut(s) 253
GlaI GCGC 1 cut(s) 232
GluI GCNGC 3 cut(s) 20, 23, 26
HgaI GACGC 1 cut(s) 101
HhaI GCGC 1 cut(s) 233
Hin6I GCGC 1 cut(s) 231
HinP1I GCGC 1 cut(s) 231
HinfI GANTC 2 cut(s) 8, 38
HphI GGTGA 2 cut(s) 64, 85
Hpy166II GTNNAC 1 cut(s) 91
Hpy188I TCNGA 2 cut(s) 43, 106
Hpy8I GTNNAC 1 cut(s) 91
HpyAV CCTTC 2 cut(s) 144, 175
HpyCH4III ACNGT 1 cut(s) 52
HpyCH4IV ACGT 1 cut(s) 111
HpyCH4V TGCA 1 cut(s) 195
HpyF10VI GCNNNNNNNGC 2 cut(s) 25, 31
HpyF3I CTNAG 1 cut(s) 234
HpySE526I ACGT 1 cut(s) 111
HspAI GCGC 1 cut(s) 231
Kzo9I GATC 1 cut(s) 84
LpnPI CCDG 5 cut(s) 20, 26, 109, 142, 181
Lsp1109I GCAGC 2 cut(s) 9, 12
LweI GCATC 1 cut(s) 6
MaeI CTAG 1 cut(s) 253
MaeII ACGT 1 cut(s) 111
MalI GATC 1 cut(s) 86
MboI GATC 1 cut(s) 84
MboII GAAGA 1 cut(s) 224
MlyI GAGTC 2 cut(s) 17, 32
MmeI TCCRAC 1 cut(s) 62
MnlI CCTC 6 cut(s) 48, 57, 178, 181, 200, 216
MwoI GCNNNNNNNGC 2 cut(s) 25, 31
NdeII GATC 1 cut(s) 84
NlaIV GGNNCC 1 cut(s) 45
PkrI GCNGC 3 cut(s) 21, 24, 27
PleI GAGTC 2 cut(s) 16, 32
PpsI GAGTC 2 cut(s) 16, 32
PspN4I GGNNCC 1 cut(s) 45
PspPI GGNCC 1 cut(s) 43
SatI GCNGC 3 cut(s) 20, 23, 26
Sau3AI GATC 1 cut(s) 84
Sau96I GGNCC 1 cut(s) 43
SchI GAGTC 2 cut(s) 17, 32
SetI ASST 4 cut(s) 36, 75, 114, 227
SfaNI GCATC 1 cut(s) 6
SinI GGWCC 1 cut(s) 43
SsiI CCGC 2 cut(s) 19, 173
SspMI CTAG 1 cut(s) 253
TaaI ACNGT 1 cut(s) 52
TaiI ACGT 1 cut(s) 114
TauI GCSGC 1 cut(s) 22
TseI GCWGC 2 cut(s) 22, 25
TspDTI ATGAA 2 cut(s) 17, 194
VpaK11BI GGWCC 1 cut(s) 43
XspI CTAG 1 cut(s) 253
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.