Rh6AG283300

BAG family molecular chaperone regulator 5

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0001749
Physical Location & Seq
Forward (+)
47904925 .. 47905203
279 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG283300.1

Sequence Viewer

Length: 279 bp
ATGGTTTGCGGCCTCTACAAGACAATCGCGGCAATCCATTCCGAGGCCGACGAGTTCCAGCGCTTGATCCAACGGCAGGAGAGGGTCGACGCCGTGAGGAGCAGCATGCGGGAGAAGCTGAGGATGAATGAGGCGCTGATGAAGTTGCTACTGAGTTTGGACTCTGTGCCCGGGGTGAACCCCACGGTGAGGGAGGCAAGGAGGAAGGTGAGCCGTCAGATCGTGGGGCTGCAGGAGATCGTTGACGCGATTGTTCAGGAAGACGTGGAGGGGTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005911 GO:0006457 GO:0008150 GO:0009266 GO:0009506 GO:0009605 GO:0009607 GO:0009628 GO:0009987 GO:0030054 GO:0043207 GO:0050896 GO:0055044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BAG IQ

Protein Analysis

92

Amino Acids

10.48

Weight (kDa)

6.58

Isoelectric Point (pI)

41.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BAG PF02179 9 - 83 1.4e-14 BAG domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 87
AccII CGCG 2 cut(s) 29, 248
AciI CCGC 3 cut(s) 9, 29, 109
AclWI GGATC 1 cut(s) 61
AcyI GRCGYC 1 cut(s) 90
AfeI AGCGCT 1 cut(s) 62
AfiI CCNNNNNNNGG 3 cut(s) 43, 76, 189
AjiI CACGTC 1 cut(s) 265
AluBI AGCT 1 cut(s) 118
AluI AGCT 1 cut(s) 118
AlwI GGATC 1 cut(s) 61
Ama87I CYCGRG 1 cut(s) 170
Aor51HI AGCGCT 1 cut(s) 62
AoxI GGCC 2 cut(s) 10, 45
ApeKI GCWGC 2 cut(s) 102, 229
AspLEI GCGC 2 cut(s) 63, 136
AsuC2I CCSGG 2 cut(s) 171, 172
AsuHPI GGTGA 3 cut(s) 187, 199, 220
AvaI CYCGRG 1 cut(s) 170
BaeGI GKGCMC 1 cut(s) 171
BbsI GAAGAC 1 cut(s) 267
BbvCI CCTCAGC 1 cut(s) 119
BbvI GCAGC 2 cut(s) 114, 216
BceAI ACGGC 3 cut(s) 77, 89, 198
BcnI CCSGG 2 cut(s) 171, 172
BfaI CTAG 1 cut(s) 277
BfmI CTRYAG 1 cut(s) 230
BfoI RGCGCY 2 cut(s) 64, 137
BisI GCNGC 4 cut(s) 10, 30, 103, 230
BlsI GCNGC 4 cut(s) 11, 31, 104, 231
Bme1390I CCNGG 2 cut(s) 171, 172
BmeT110I CYCGRG 1 cut(s) 170
BmgBI CACGTC 1 cut(s) 265
BmrFI CCNGG 2 cut(s) 171, 172
BpiI GAAGAC 1 cut(s) 267
Bpu10I CCTNAGC 1 cut(s) 119
BpuMI CCSGG 2 cut(s) 171, 172
BsaHI GRCGYC 1 cut(s) 90
BsaJI CCNNGG 4 cut(s) 42, 170, 171, 183
Bsc4I CCNNNNNNNGG 3 cut(s) 43, 76, 189
BseDI CCNNGG 4 cut(s) 42, 170, 171, 183
BseGI GGATG 1 cut(s) 129
BseLI CCNNNNNNNGG 3 cut(s) 43, 76, 189
BseMII CTCAG 2 cut(s) 110, 143
BseRI GAGGAG 1 cut(s) 112
BseSI GKGCMC 1 cut(s) 171
BseXI GCAGC 2 cut(s) 114, 216
Bsh1236I CGCG 2 cut(s) 29, 248
BshFI GGCC 2 cut(s) 12, 47
BsiHKCI CYCGRG 1 cut(s) 170
BsiSI CCGG 1 cut(s) 171
BslI CCNNNNNNNGG 3 cut(s) 43, 76, 189
BsnI GGCC 2 cut(s) 12, 47
BsoBI CYCGRG 1 cut(s) 170
Bsp1286I GDGCHC 1 cut(s) 171
Bsp143I GATC 3 cut(s) 66, 219, 237
BspACI CCGC 3 cut(s) 9, 29, 109
BspANI GGCC 2 cut(s) 12, 47
BspCNI CTCAG 2 cut(s) 111, 144
BspFNI CGCG 2 cut(s) 29, 248
BspMAI CTGCAG 1 cut(s) 234
BspPI GGATC 1 cut(s) 61
BssECI CCNNGG 4 cut(s) 42, 170, 171, 183
BssMI GATC 3 cut(s) 66, 219, 237
BssNI GRCGYC 1 cut(s) 90
Bst4CI ACNGT 1 cut(s) 187
BstACI GRCGYC 1 cut(s) 90
BstC8I GCNNGC 1 cut(s) 107
BstDEI CTNAG 2 cut(s) 119, 152
BstDSI CCRYGG 1 cut(s) 183
BstF5I GGATG 1 cut(s) 129
BstFNI CGCG 2 cut(s) 29, 248
BstH2I RGCGCY 2 cut(s) 64, 137
BstHHI GCGC 2 cut(s) 63, 136
BstKTI GATC 3 cut(s) 69, 222, 240
BstMBI GATC 3 cut(s) 66, 219, 237
BstMWI GCNNNNNNNGC 1 cut(s) 115
BstNSI RCATGY 1 cut(s) 109
BstSCI CCNGG 2 cut(s) 169, 170
BstSFI CTRYAG 1 cut(s) 230
BstSLI GKGCMC 1 cut(s) 171
BstUI CGCG 2 cut(s) 29, 248
BstV1I GCAGC 2 cut(s) 114, 216
BstV2I GAAGAC 1 cut(s) 267
BsuRI GGCC 2 cut(s) 12, 47
BtgI CCRYGG 1 cut(s) 183
BtrI CACGTC 1 cut(s) 265
BtsCI GGATG 1 cut(s) 129
Cac8I GCNNGC 1 cut(s) 107
CfoI GCGC 2 cut(s) 63, 136
Cfr9I CCCGGG 1 cut(s) 170
CseI GACGC 2 cut(s) 98, 254
CviAII CATG 1 cut(s) 106
CviJI RGCY 5 cut(s) 12, 47, 118, 213, 229
CviKI_1 RGCY 5 cut(s) 12, 47, 118, 213, 229
DdeI CTNAG 2 cut(s) 119, 152
DpnI GATC 3 cut(s) 68, 221, 239
DpnII GATC 3 cut(s) 66, 219, 237
Eco47III AGCGCT 1 cut(s) 62
Eco88I CYCGRG 1 cut(s) 170
FaeI CATG 1 cut(s) 109
FaiI YATR 1 cut(s) 107
FatI CATG 1 cut(s) 105
FauI CCCGC 1 cut(s) 102
FblI GTMKAC 1 cut(s) 87
Fnu4HI GCNGC 4 cut(s) 10, 30, 103, 230
FokI GGATG 1 cut(s) 136
Fsp4HI GCNGC 4 cut(s) 10, 30, 103, 230
FspBI CTAG 1 cut(s) 277
GlaI GCGC 2 cut(s) 62, 135
GluI GCNGC 4 cut(s) 10, 30, 103, 230
HaeII RGCGCY 2 cut(s) 64, 137
HaeIII GGCC 2 cut(s) 12, 47
HapII CCGG 1 cut(s) 171
HgaI GACGC 2 cut(s) 98, 254
HhaI GCGC 2 cut(s) 63, 136
Hin1I GRCGYC 1 cut(s) 90
Hin1II CATG 1 cut(s) 109
Hin6I GCGC 2 cut(s) 61, 134
HinP1I GCGC 2 cut(s) 61, 134
HincII GTYRAC 2 cut(s) 88, 244
HindII GTYRAC 2 cut(s) 88, 244
HinfI GANTC 1 cut(s) 161
HpaII CCGG 1 cut(s) 171
HphI GGTGA 3 cut(s) 187, 199, 220
Hpy166II GTNNAC 3 cut(s) 88, 178, 244
Hpy188I TCNGA 2 cut(s) 43, 219
Hpy188III TCNNGA 1 cut(s) 257
Hpy8I GTNNAC 3 cut(s) 88, 178, 244
Hpy99I CGWCG 2 cut(s) 53, 92
HpyAV CCTTC 1 cut(s) 199
HpyCH4III ACNGT 1 cut(s) 187
HpyCH4IV ACGT 1 cut(s) 264
HpyCH4V TGCA 1 cut(s) 232
HpyF10VI GCNNNNNNNGC 1 cut(s) 115
HpyF3I CTNAG 2 cut(s) 119, 152
HpySE526I ACGT 1 cut(s) 264
Hsp92I GRCGYC 1 cut(s) 90
Hsp92II CATG 1 cut(s) 109
HspAI GCGC 2 cut(s) 61, 134
Kzo9I GATC 3 cut(s) 66, 219, 237
LmnI GCTCC 1 cut(s) 99
LpnPI CCDG 5 cut(s) 62, 71, 184, 218, 242
Lsp1109I GCAGC 2 cut(s) 114, 216
MaeI CTAG 1 cut(s) 277
MaeII ACGT 1 cut(s) 264
MalI GATC 3 cut(s) 68, 221, 239
MboI GATC 3 cut(s) 66, 219, 237
MboII GAAGA 1 cut(s) 272
MhlI GDGCHC 1 cut(s) 171
MlyI GAGTC 1 cut(s) 155
MmeI TCCRAC 1 cut(s) 94
MspI CCGG 1 cut(s) 171
MspR9I CCNGG 2 cut(s) 171, 172
MvnI CGCG 2 cut(s) 29, 248
MwoI GCNNNNNNNGC 1 cut(s) 115
NciI CCSGG 2 cut(s) 171, 172
NdeII GATC 3 cut(s) 66, 219, 237
NlaIII CATG 1 cut(s) 109
NspI RCATGY 1 cut(s) 109
PaeI GCATGC 1 cut(s) 109
PkrI GCNGC 4 cut(s) 11, 31, 104, 231
PleI GAGTC 1 cut(s) 155
PpsI GAGTC 1 cut(s) 155
PstI CTGCAG 1 cut(s) 234
SalI GTCGAC 1 cut(s) 86
SatI GCNGC 4 cut(s) 10, 30, 103, 230
Sau3AI GATC 3 cut(s) 66, 219, 237
SchI GAGTC 1 cut(s) 155
ScrFI CCNGG 2 cut(s) 171, 172
SduI GDGCHC 1 cut(s) 171
SetI ASST 3 cut(s) 120, 210, 267
SfcI CTRYAG 1 cut(s) 230
SmaI CCCGGG 1 cut(s) 172
SphI GCATGC 1 cut(s) 109
SsiI CCGC 3 cut(s) 9, 29, 109
SspMI CTAG 1 cut(s) 277
StyD4I CCNGG 2 cut(s) 169, 170
TaaI ACNGT 1 cut(s) 187
TaiI ACGT 1 cut(s) 267
TaqI TCGA 1 cut(s) 87
TauI GCSGC 2 cut(s) 12, 32
TseI GCWGC 2 cut(s) 102, 229
TspDTI ATGAA 2 cut(s) 140, 155
TspMI CCCGGG 1 cut(s) 170
XceI RCATGY 1 cut(s) 109
XmaI CCCGGG 1 cut(s) 170
XmiI GTMKAC 1 cut(s) 87
XspI CTAG 1 cut(s) 277
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.