RchiOBHm_Chr4g0429621

BAG family molecular chaperone regulator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0001749
Physical Location & Seq
Forward (+)
54399092 .. 54400316
1225 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ39839

Sequence Viewer

Length: 1002 bp
ATGCCGATCCAACCCCTCCCTATAAATATCCAATTCCCACTTTCATTCCTCCATCAAATCAAAAAAATTCTCAAAAGCAAAATCTTTCATCATCTACTTCCAATTTTTTCGACAAATTCCCCAATCTACTTATCTATCATGGAATCCCCATTCTTCGGTAATCCCTGGTACGACTACACTCCCCGCTCTCACTATCGTTCACCGAGCATGAGAGAAGTCCCAATCCAACGCCCAGATTACCCTCGCAATTATTCACTCAGAAACAGAGACGTCCCAGTCCAGCCCCAATCGGCCCGGGCTCCCAAGGTGGTCTCAATCCCGGTCCAACACGCCGGGTCGGAGCGTAGCCGGTCTGATCTACGCTCCGATGCGGCGCTGAAGATCCAGAAGGTCTTCAGAGGGTATTTGGTGAGGAAAAGCGTGAGCAAGATCGCCGGGATCAAACGCGAGGTGGATGAGATTTCGAATCGAATCTCGAAGAAGGAAACGGAAGATTTGGTCAGAACCGACGCCAAGGAGCGGTTGAAGGTGGTCGAGACTCTGATGAGCTTGCTCCTGAAATTGGATTCCGTCAAGGGAGTCGACTGCGGGGTTAGGGATTTTAGGAGGGCGGTGATTAAGAAGGCGATTGCTCTGCAGGAGAAAGTGGAGGCCTCTGCGGCAAATCATCAAACGCCTGGTGGGCATGAATCTGCTGAGCTTGAAACCAATTCGGGCTTGCAATCTTCGGAACAAAACGCCCAGACGGTTGTGAATCAGAGGGAATCATCTAGCGATTCAACGGAGAGCAAGAAGAAAGAGGAGCTAATAGAGAAGATGGTGGAGGAGAATGAGAGGATGGTGGGTCTGGTGACGGAGCTGGTTCACCGGAATGAAAAGCAAACCCGGCTGCTGGGGTCGCTGTCGCAGAGGGTGGAGCAGCTGGAGAGGGCTCTCATCAATCAGAGATTGAGGAGGAAGAAGAGGAGACATACTGTAGATTGCAGGGAAGGATTCTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005911 GO:0006457 GO:0008150 GO:0009266 GO:0009506 GO:0009605 GO:0009607 GO:0009628 GO:0009987 GO:0030054 GO:0043207 GO:0050896 GO:0055044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BAG IQ

Protein Analysis

333

Amino Acids

38.26

Weight (kDa)

9.87

Isoelectric Point (pI)

56.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BAG PF02179 144 - 218 1.7e-10 BAG domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 275
AatII GACGTC 1 cut(s) 273
AccBSI CCGCTC 2 cut(s) 186, 520
AccI GTMKAC 1 cut(s) 582
AccII CGCG 1 cut(s) 447
AciI CCGC 6 cut(s) 184, 371, 520, 588, 611, 659
AclWI GGATC 2 cut(s) 376, 446
AcsI RAATTY 2 cut(s) 66, 115
AcuI CTGAAG 2 cut(s) 379, 398
AcyI GRCGYC 2 cut(s) 270, 510
AfaI GTAC 1 cut(s) 170
AfiI CCNNNNNNNGG 4 cut(s) 155, 519, 562, 892
AgsI TTSAA 3 cut(s) 526, 704, 780
AjnI CCWGG 2 cut(s) 164, 676
AluBI AGCT 5 cut(s) 549, 700, 805, 859, 922
AluI AGCT 5 cut(s) 549, 700, 805, 859, 922
Alw26I GTCTC 4 cut(s) 261, 316, 530, 961
AlwI GGATC 2 cut(s) 376, 446
Ama87I CYCGRG 1 cut(s) 294
AoxI GGCC 2 cut(s) 291, 651
ApeKI GCWGC 2 cut(s) 889, 919
ApoI RAATTY 2 cut(s) 66, 115
Asp700I GAANNNNTTC 1 cut(s) 392
AspLEI GCGC 1 cut(s) 376
AspS9I GGNCC 2 cut(s) 292, 322
AsuC2I CCSGG 6 cut(s) 295, 296, 320, 334, 436, 886
AsuHPI GGTGA 5 cut(s) 192, 421, 625, 857, 862
AsuII TTCGAA 1 cut(s) 464
AvaI CYCGRG 1 cut(s) 294
AvaII GGWCC 1 cut(s) 322
BanII GRGCYC 2 cut(s) 301, 934
BbsI GAAGAC 1 cut(s) 385
BbvI GCAGC 2 cut(s) 876, 931
BccI CCATC 3 cut(s) 60, 811, 832
BcgI CGANNNNNNTGC 2 cut(s) 616, 650
BciT130I CCWGG 2 cut(s) 166, 678
BcnI CCSGG 6 cut(s) 295, 296, 320, 334, 436, 886
BcoDI GTCTC 4 cut(s) 261, 316, 530, 961
BfaI CTAG 2 cut(s) 771, 1000
BfmI CTRYAG 2 cut(s) 635, 975
BfoI RGCGCY 1 cut(s) 377
BglI GCCNNNNNGGC 2 cut(s) 659, 682
BisI GCNGC 4 cut(s) 372, 660, 890, 920
BlpI GCTNAGC 1 cut(s) 696
BlsI GCNGC 4 cut(s) 373, 661, 891, 921
Bme1390I CCNGG 8 cut(s) 166, 295, 296, 320, 334, 436, 678, 886
Bme18I GGWCC 1 cut(s) 322
BmeT110I CYCGRG 1 cut(s) 294
BmgT120I GGNCC 2 cut(s) 292, 322
BmiI GGNNCC 1 cut(s) 300
BmrFI CCNGG 8 cut(s) 166, 295, 296, 320, 334, 436, 678, 886
BmrI ACTGGG 1 cut(s) 269
BmsI GCATC 1 cut(s) 358
BmuI ACTGGG 1 cut(s) 269
BpiI GAAGAC 1 cut(s) 385
BpmI CTGGAG 1 cut(s) 944
Bpu1102I GCTNAGC 1 cut(s) 696
Bpu14I TTCGAA 1 cut(s) 464
BpuMI CCSGG 6 cut(s) 295, 296, 320, 334, 436, 886
BsaHI GRCGYC 2 cut(s) 270, 510
BsaI GGTCTC 1 cut(s) 316
BsaJI CCNNGG 4 cut(s) 164, 294, 303, 513
BsaWI WCCGGW 1 cut(s) 867
Bsc4I CCNNNNNNNGG 4 cut(s) 155, 519, 562, 892
Bse118I RCCGGY 1 cut(s) 348
Bse1I ACTGG 1 cut(s) 275
BseBI CCWGG 2 cut(s) 166, 678
BseDI CCNNGG 4 cut(s) 164, 294, 303, 513
BseGI GGATG 2 cut(s) 460, 843
BseLI CCNNNNNNNGG 4 cut(s) 155, 519, 562, 892
BseMII CTCAG 2 cut(s) 271, 687
BseNI ACTGG 1 cut(s) 275
BseRI GAGGAG 4 cut(s) 815, 839, 967, 979
BseXI GCAGC 2 cut(s) 876, 931
BseYI CCCAGC 1 cut(s) 892
Bsh1236I CGCG 1 cut(s) 447
BshFI GGCC 2 cut(s) 293, 653
BsiHKCI CYCGRG 1 cut(s) 294
BsiSI CCGG 7 cut(s) 295, 320, 333, 349, 435, 868, 886
BslFI GGGAC 2 cut(s) 203, 257
BslI CCNNNNNNNGG 4 cut(s) 155, 519, 562, 892
BsmAI GTCTC 4 cut(s) 261, 316, 530, 961
BsmBI CGTCTC 1 cut(s) 261
BsmFI GGGAC 2 cut(s) 203, 257
BsnI GGCC 2 cut(s) 293, 653
Bso31I GGTCTC 1 cut(s) 316
BsoBI CYCGRG 1 cut(s) 294
Bsp119I TTCGAA 1 cut(s) 464
Bsp1286I GDGCHC 2 cut(s) 301, 934
Bsp143I GATC 5 cut(s) 6, 355, 381, 429, 438
Bsp1720I GCTNAGC 1 cut(s) 696
BspACI CCGC 6 cut(s) 184, 371, 520, 588, 611, 659
BspANI GGCC 2 cut(s) 293, 653
BspCNI CTCAG 2 cut(s) 270, 688
BspFNI CGCG 1 cut(s) 447
BspLI GGNNCC 1 cut(s) 300
BspMAI CTGCAG 1 cut(s) 639
BspPI GGATC 2 cut(s) 376, 446
BspT104I TTCGAA 1 cut(s) 464
BspTNI GGTCTC 1 cut(s) 316
BsrBI CCGCTC 2 cut(s) 186, 520
BsrFI RCCGGY 1 cut(s) 348
BsrI ACTGG 1 cut(s) 275
BssAI RCCGGY 1 cut(s) 348
BssECI CCNNGG 4 cut(s) 164, 294, 303, 513
BssMI GATC 5 cut(s) 6, 355, 381, 429, 438
BssNI GRCGYC 2 cut(s) 270, 510
BssT1I CCWWGG 2 cut(s) 303, 513
Bst2UI CCWGG 2 cut(s) 166, 678
Bst4CI ACNGT 2 cut(s) 748, 976
Bst6I CTCTTC 1 cut(s) 956
BstACI GRCGYC 2 cut(s) 270, 510
BstBI TTCGAA 1 cut(s) 464
BstC8I GCNNGC 2 cut(s) 551, 719
BstDEI CTNAG 2 cut(s) 257, 696
BstF5I GGATG 2 cut(s) 460, 843
BstFNI CGCG 1 cut(s) 447
BstH2I RGCGCY 1 cut(s) 377
BstHHI GCGC 1 cut(s) 376
BstKTI GATC 5 cut(s) 9, 358, 384, 432, 441
BstMAI GTCTC 4 cut(s) 261, 316, 530, 961
BstMBI GATC 5 cut(s) 6, 355, 381, 429, 438
BstMWI GCNNNNNNNGC 4 cut(s) 659, 682, 886, 898
BstNI CCWGG 2 cut(s) 166, 678
BstSCI CCNGG 8 cut(s) 164, 293, 294, 318, 332, 434, 676, 884
BstSFI CTRYAG 2 cut(s) 635, 975
BstUI CGCG 1 cut(s) 447
BstV1I GCAGC 2 cut(s) 876, 931
BstV2I GAAGAC 1 cut(s) 385
BstX2I RGATCY 1 cut(s) 381
BstYI RGATCY 1 cut(s) 381
BsuRI GGCC 2 cut(s) 293, 653
BtsCI GGATG 2 cut(s) 460, 843
Cac8I GCNNGC 2 cut(s) 551, 719
CfoI GCGC 1 cut(s) 376
Cfr10I RCCGGY 1 cut(s) 348
Cfr13I GGNCC 2 cut(s) 292, 322
Cfr9I CCCGGG 1 cut(s) 294
CseI GACGC 1 cut(s) 518
Csp6I GTAC 1 cut(s) 169
CviAII CATG 3 cut(s) 139, 208, 686
CviQI GTAC 1 cut(s) 169
DdeI CTNAG 2 cut(s) 257, 696
DpnI GATC 5 cut(s) 8, 357, 383, 431, 440
DpnII GATC 5 cut(s) 6, 355, 381, 429, 438
DrdI GACNNNNNNGTC 1 cut(s) 275
DseDI GACNNNNNNGTC 1 cut(s) 275
Eam1104I CTCTTC 1 cut(s) 956
EarI CTCTTC 1 cut(s) 956
Eco130I CCWWGG 2 cut(s) 303, 513
Eco147I AGGCCT 1 cut(s) 653
Eco24I GRGCYC 2 cut(s) 301, 934
Eco31I GGTCTC 1 cut(s) 316
Eco47I GGWCC 1 cut(s) 322
Eco57I CTGAAG 2 cut(s) 379, 398
Eco88I CYCGRG 1 cut(s) 294
EcoRII CCWGG 2 cut(s) 164, 676
EcoT14I CCWWGG 2 cut(s) 303, 513
EcoT38I GRGCYC 2 cut(s) 301, 934
ErhI CCWWGG 2 cut(s) 303, 513
Esp3I CGTCTC 1 cut(s) 261
FaeI CATG 3 cut(s) 142, 211, 689
FaiI YATR 5 cut(s) 23, 140, 209, 687, 972
FaqI GGGAC 2 cut(s) 203, 257
FatI CATG 3 cut(s) 138, 207, 685
FauI CCCGC 2 cut(s) 191, 581
FblI GTMKAC 1 cut(s) 582
Fnu4HI GCNGC 4 cut(s) 372, 660, 890, 920
FokI GGATG 2 cut(s) 467, 850
FriOI GRGCYC 2 cut(s) 301, 934
Fsp4HI GCNGC 4 cut(s) 372, 660, 890, 920
FspBI CTAG 2 cut(s) 771, 1000
GlaI GCGC 1 cut(s) 375
GluI GCNGC 4 cut(s) 372, 660, 890, 920
GsaI CCCAGC 1 cut(s) 896
GsuI CTGGAG 1 cut(s) 944
HaeII RGCGCY 1 cut(s) 377
HaeIII GGCC 2 cut(s) 293, 653
HapII CCGG 7 cut(s) 295, 320, 333, 349, 435, 868, 886
HgaI GACGC 1 cut(s) 518
HhaI GCGC 1 cut(s) 376
Hin1I GRCGYC 2 cut(s) 270, 510
Hin1II CATG 3 cut(s) 142, 211, 689
Hin6I GCGC 1 cut(s) 374
HinP1I GCGC 1 cut(s) 374
HincII GTYRAC 1 cut(s) 583
HindII GTYRAC 1 cut(s) 583
HpaII CCGG 7 cut(s) 295, 320, 333, 349, 435, 868, 886
HphI GGTGA 5 cut(s) 192, 421, 625, 857, 862
Hpy166II GTNNAC 3 cut(s) 200, 583, 865
Hpy188III TCNNGA 4 cut(s) 385, 475, 535, 556
Hpy8I GTNNAC 3 cut(s) 200, 583, 865
Hpy99I CGWCG 1 cut(s) 512
HpyAV CCTTC 5 cut(s) 382, 475, 520, 616, 983
HpyCH4III ACNGT 2 cut(s) 748, 976
HpyCH4IV ACGT 1 cut(s) 270
HpyCH4V TGCA 3 cut(s) 637, 721, 984
HpyF10VI GCNNNNNNNGC 4 cut(s) 659, 682, 886, 898
HpyF3I CTNAG 2 cut(s) 257, 696
HpySE526I ACGT 1 cut(s) 270
Hsp92I GRCGYC 2 cut(s) 270, 510
Hsp92II CATG 3 cut(s) 142, 211, 689
HspAI GCGC 1 cut(s) 374
Kzo9I GATC 5 cut(s) 6, 355, 381, 429, 438
LmnI GCTCC 8 cut(s) 304, 340, 368, 517, 558, 802, 856, 916
Lsp1109I GCAGC 2 cut(s) 876, 931
LweI GCATC 1 cut(s) 358
MaeI CTAG 2 cut(s) 771, 1000
MaeII ACGT 1 cut(s) 270
MaeIII GTNAC 1 cut(s) 850
MalI GATC 5 cut(s) 8, 357, 383, 431, 440
MbiI CCGCTC 2 cut(s) 186, 520
MboI GATC 5 cut(s) 6, 355, 381, 429, 438
MflI RGATCY 1 cut(s) 381
MhlI GDGCHC 2 cut(s) 301, 934
MluCI AATT 7 cut(s) 32, 66, 102, 115, 247, 560, 709
MlyI GAGTC 2 cut(s) 532, 588
MmeI TCCRAC 4 cut(s) 34, 250, 318, 349
MroXI GAANNNNTTC 1 cut(s) 392
MseI TTAA 1 cut(s) 618
MslI CAYNNNNRTG 1 cut(s) 870
MspA1I CMGCKG 1 cut(s) 922
MspI CCGG 7 cut(s) 295, 320, 333, 349, 435, 868, 886
MspR9I CCNGG 8 cut(s) 166, 295, 296, 320, 334, 436, 678, 886
MvaI CCWGG 2 cut(s) 166, 678
MvnI CGCG 1 cut(s) 447
MwoI GCNNNNNNNGC 4 cut(s) 659, 682, 886, 898
NciI CCSGG 6 cut(s) 295, 296, 320, 334, 436, 886
NdeII GATC 5 cut(s) 6, 355, 381, 429, 438
NlaIII CATG 3 cut(s) 142, 211, 689
NlaIV GGNNCC 1 cut(s) 300
NmuCI GTSAC 1 cut(s) 850
NspV TTCGAA 1 cut(s) 464
PceI AGGCCT 1 cut(s) 653
PdmI GAANNNNTTC 1 cut(s) 392
PfeI GAWTC 9 cut(s) 143, 466, 471, 566, 689, 754, 764, 776, 993
PkrI GCNGC 4 cut(s) 373, 661, 891, 921
PleI GAGTC 2 cut(s) 532, 587
PpsI GAGTC 2 cut(s) 532, 587
Psp6I CCWGG 2 cut(s) 164, 676
PspFI CCCAGC 1 cut(s) 892
PspGI CCWGG 2 cut(s) 164, 676
PspN4I GGNNCC 1 cut(s) 300
PspPI GGNCC 2 cut(s) 292, 322
PstI CTGCAG 1 cut(s) 639
PsuI RGATCY 1 cut(s) 381
PvuII CAGCTG 1 cut(s) 922
RsaI GTAC 1 cut(s) 170
RsaNI GTAC 1 cut(s) 169
RseI CAYNNNNRTG 1 cut(s) 870
SalI GTCGAC 1 cut(s) 581
SaqAI TTAA 1 cut(s) 618
SatI GCNGC 4 cut(s) 372, 660, 890, 920
Sau3AI GATC 5 cut(s) 6, 355, 381, 429, 438
Sau96I GGNCC 2 cut(s) 292, 322
SchI GAGTC 2 cut(s) 532, 588
ScrFI CCNGG 8 cut(s) 166, 295, 296, 320, 334, 436, 678, 886
SduI GDGCHC 2 cut(s) 301, 934
SfaNI GCATC 1 cut(s) 358
SfcI CTRYAG 2 cut(s) 635, 975
SfuI TTCGAA 1 cut(s) 464
SinI GGWCC 1 cut(s) 322
SmaI CCCGGG 1 cut(s) 296
SmiMI CAYNNNNRTG 1 cut(s) 870
SrfI GCCCGGGC 1 cut(s) 296
Sse9I AATT 7 cut(s) 32, 66, 102, 115, 247, 560, 709
SseBI AGGCCT 1 cut(s) 653
SsiI CCGC 6 cut(s) 184, 371, 520, 588, 611, 659
SspMI CTAG 2 cut(s) 771, 1000
StuI AGGCCT 1 cut(s) 653
StyD4I CCNGG 8 cut(s) 164, 293, 294, 318, 332, 434, 676, 884
StyI CCWWGG 2 cut(s) 303, 513
TaaI ACNGT 2 cut(s) 748, 976
TaiI ACGT 1 cut(s) 273
TaqI TCGA 6 cut(s) 110, 464, 469, 476, 534, 582
TasI AATT 7 cut(s) 32, 66, 102, 115, 247, 560, 709
TauI GCSGC 2 cut(s) 374, 662
TfiI GAWTC 9 cut(s) 143, 466, 471, 566, 689, 754, 764, 776, 993
Tru1I TTAA 1 cut(s) 618
Tru9I TTAA 1 cut(s) 618
TseFI GTSAC 1 cut(s) 850
TseI GCWGC 2 cut(s) 889, 919
Tsp45I GTSAC 1 cut(s) 850
TspDTI ATGAA 4 cut(s) 33, 77, 702, 888
TspGWI ACGGA 4 cut(s) 503, 559, 797, 869
TspMI CCCGGG 1 cut(s) 294
VpaK11BI GGWCC 1 cut(s) 322
XapI RAATTY 2 cut(s) 66, 115
XmaI CCCGGG 1 cut(s) 294
XmiI GTMKAC 1 cut(s) 582
XmnI GAANNNNTTC 1 cut(s) 392
XspI CTAG 2 cut(s) 771, 1000
ZraI GACGTC 1 cut(s) 271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.