MD09G1110100.v1.1

BAG family molecular chaperone regulator 5

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0001749
Physical Location & Seq
Forward (+)
8177529 .. 8177783
255 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1110100.v1.1.491

Sequence Viewer

Length: 255 bp
ATGAACGAGTCCCTGATGTGGCTGCTGTTGAAGCTGGACTCGGACCTCGCGGTGAGGGAAGCGAGGAGAAAGGTGAGCCGTCGGATCGTGGACGCAATCGTATCAGAAGACGTGGATGGCTTATGGGGTGGCAGAGACGGTGGGTTTGGGAGGAACTGGGACGACGTCCTTGCGGAGATGAAGGATGAGGCGTGCAGGGACAAAAGATGGGAAGAGATGGAGAGGTTTTGCGCTCAGTATATGGGGTTTTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005911 GO:0006457 GO:0008150 GO:0009266 GO:0009506 GO:0009605 GO:0009607 GO:0009628 GO:0009987 GO:0030054 GO:0043207 GO:0050896 GO:0055044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BAG IQ

Protein Analysis

85

Amino Acids

9.89

Weight (kDa)

4.8

Isoelectric Point (pI)

55.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 168
AccII CGCG 1 cut(s) 50
AciI CCGC 2 cut(s) 50, 173
AclWI GGATC 1 cut(s) 92
AcyI GRCGYC 1 cut(s) 165
AfiI CCNNNNNNNGG 1 cut(s) 18
AgsI TTSAA 1 cut(s) 31
AjiI CACGTC 1 cut(s) 112
AluBI AGCT 1 cut(s) 34
AluI AGCT 1 cut(s) 34
Alw26I GTCTC 1 cut(s) 129
AlwI GGATC 1 cut(s) 92
ApeKI GCWGC 1 cut(s) 22
ArsI GACNNNNNNTTYG 2 cut(s) 128, 160
AspLEI GCGC 1 cut(s) 233
AspS9I GGNCC 1 cut(s) 43
AsuHPI GGTGA 2 cut(s) 64, 85
AvaII GGWCC 1 cut(s) 43
BbsI GAAGAC 1 cut(s) 114
BbvI GCAGC 1 cut(s) 9
BccI CCATC 3 cut(s) 110, 201, 211
BceAI ACGGC 1 cut(s) 63
BcgI CGANNNNNNTGC 2 cut(s) 152, 186
BcoDI GTCTC 1 cut(s) 129
BfaI CTAG 1 cut(s) 253
BisI GCNGC 1 cut(s) 23
BlsI GCNGC 1 cut(s) 24
Bme18I GGWCC 1 cut(s) 43
BmgBI CACGTC 1 cut(s) 112
BmgT120I GGNCC 1 cut(s) 43
BmrI ACTGGG 1 cut(s) 166
BmuI ACTGGG 1 cut(s) 166
BpiI GAAGAC 1 cut(s) 114
BsaHI GRCGYC 1 cut(s) 165
Bsc4I CCNNNNNNNGG 1 cut(s) 18
Bse1I ACTGG 1 cut(s) 161
BseGI GGATG 2 cut(s) 121, 190
BseLI CCNNNNNNNGG 1 cut(s) 18
BseMII CTCAG 1 cut(s) 248
BseNI ACTGG 1 cut(s) 161
BseRI GAGGAG 1 cut(s) 79
BseXI GCAGC 1 cut(s) 9
BsgI GTGCAG 1 cut(s) 214
Bsh1236I CGCG 1 cut(s) 50
BslFI GGGAC 2 cut(s) 173, 212
BslI CCNNNNNNNGG 1 cut(s) 18
BsmAI GTCTC 1 cut(s) 129
BsmBI CGTCTC 1 cut(s) 129
BsmFI GGGAC 2 cut(s) 173, 212
Bsp143I GATC 1 cut(s) 84
BspACI CCGC 2 cut(s) 50, 173
BspCNI CTCAG 1 cut(s) 247
BspFNI CGCG 1 cut(s) 50
BspPI GGATC 1 cut(s) 92
BsrI ACTGG 1 cut(s) 161
BssMI GATC 1 cut(s) 84
BssNI GRCGYC 1 cut(s) 165
Bst4CI ACNGT 1 cut(s) 140
Bst6I CTCTTC 1 cut(s) 207
BstACI GRCGYC 1 cut(s) 165
BstC8I GCNNGC 1 cut(s) 193
BstDEI CTNAG 1 cut(s) 234
BstF5I GGATG 2 cut(s) 121, 190
BstFNI CGCG 1 cut(s) 50
BstHHI GCGC 1 cut(s) 233
BstKTI GATC 1 cut(s) 87
BstMAI GTCTC 1 cut(s) 129
BstMBI GATC 1 cut(s) 84
BstMWI GCNNNNNNNGC 1 cut(s) 31
BstUI CGCG 1 cut(s) 50
BstV1I GCAGC 1 cut(s) 9
BstV2I GAAGAC 1 cut(s) 114
BtrI CACGTC 1 cut(s) 112
BtsCI GGATG 2 cut(s) 121, 190
Cac8I GCNNGC 1 cut(s) 193
CfoI GCGC 1 cut(s) 233
Cfr13I GGNCC 1 cut(s) 43
CseI GACGC 1 cut(s) 101
CviJI RGCY 4 cut(s) 22, 34, 78, 120
CviKI_1 RGCY 4 cut(s) 22, 34, 78, 120
DdeI CTNAG 1 cut(s) 234
DpnI GATC 1 cut(s) 86
DpnII GATC 1 cut(s) 84
Eam1104I CTCTTC 1 cut(s) 207
EarI CTCTTC 1 cut(s) 207
Eco47I GGWCC 1 cut(s) 43
Esp3I CGTCTC 1 cut(s) 129
FaiI YATR 3 cut(s) 124, 240, 242
FaqI GGGAC 2 cut(s) 173, 212
Fnu4HI GCNGC 1 cut(s) 23
FokI GGATG 2 cut(s) 128, 197
Fsp4HI GCNGC 1 cut(s) 23
FspBI CTAG 1 cut(s) 253
GlaI GCGC 1 cut(s) 232
GluI GCNGC 1 cut(s) 23
HgaI GACGC 1 cut(s) 101
HhaI GCGC 1 cut(s) 233
Hin1I GRCGYC 1 cut(s) 165
Hin6I GCGC 1 cut(s) 231
HinP1I GCGC 1 cut(s) 231
HinfI GANTC 2 cut(s) 8, 38
HphI GGTGA 2 cut(s) 64, 85
Hpy166II GTNNAC 1 cut(s) 91
Hpy188I TCNGA 3 cut(s) 43, 84, 106
Hpy8I GTNNAC 1 cut(s) 91
Hpy99I CGWCG 2 cut(s) 84, 167
HpyAV CCTTC 1 cut(s) 175
HpyCH4III ACNGT 1 cut(s) 140
HpyCH4IV ACGT 2 cut(s) 111, 165
HpyCH4V TGCA 1 cut(s) 195
HpyF10VI GCNNNNNNNGC 1 cut(s) 31
HpyF3I CTNAG 1 cut(s) 234
HpySE526I ACGT 2 cut(s) 111, 165
Hsp92I GRCGYC 1 cut(s) 165
HspAI GCGC 1 cut(s) 231
Kzo9I GATC 1 cut(s) 84
LpnPI CCDG 4 cut(s) 20, 26, 142, 181
Lsp1109I GCAGC 1 cut(s) 9
MaeI CTAG 1 cut(s) 253
MaeII ACGT 2 cut(s) 111, 165
MalI GATC 1 cut(s) 86
MboI GATC 1 cut(s) 84
MboII GAAGA 2 cut(s) 119, 224
MlyI GAGTC 2 cut(s) 17, 32
MmeI TCCRAC 1 cut(s) 62
MnlI CCTC 6 cut(s) 48, 56, 57, 144, 181, 216
MvnI CGCG 1 cut(s) 50
MwoI GCNNNNNNNGC 1 cut(s) 31
NdeII GATC 1 cut(s) 84
PflFI GACNNNGTC 1 cut(s) 164
PkrI GCNGC 1 cut(s) 24
PleI GAGTC 2 cut(s) 16, 32
PpsI GAGTC 2 cut(s) 16, 32
PspPI GGNCC 1 cut(s) 43
PsyI GACNNNGTC 1 cut(s) 164
SatI GCNGC 1 cut(s) 23
Sau3AI GATC 1 cut(s) 84
Sau96I GGNCC 1 cut(s) 43
SchI GAGTC 2 cut(s) 17, 32
SetI ASST 6 cut(s) 36, 48, 75, 114, 168, 227
SinI GGWCC 1 cut(s) 43
SsiI CCGC 2 cut(s) 50, 173
SspMI CTAG 1 cut(s) 253
TaaI ACNGT 1 cut(s) 140
TaiI ACGT 2 cut(s) 114, 168
TseI GCWGC 1 cut(s) 22
TspDTI ATGAA 2 cut(s) 17, 194
Tth111I GACNNNGTC 1 cut(s) 164
VpaK11BI GGWCC 1 cut(s) 43
XspI CTAG 1 cut(s) 253
ZraI GACGTC 1 cut(s) 166
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.