Rh5DG012500

BAG family molecular chaperone regulator 5

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0001749
Physical Location & Seq
Reverse (-)
815462 .. 816070
609 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG012500.1

Sequence Viewer

Length: 609 bp
ATGAAACCCTCTCACCGCCGCAGACTCAGCTTCTCCTCCACCGCCACCGTCACCTACACTCTCCGCAATGACCAACCTGCCCCTCCCACCTCCACCCCGATTCCCATCACTGTACACGTACGGCAGTCCTCTGCCGCCGCCGTCAAAATCCAATCGGCCTACCGGAGCCACCTGATCCGCAACCTCTACAGGACAATCGCGGCCGTCCATTCCGAGGCCGACGAGTTCCAGCGCCTGATCCAACGGCAGGAGACGGTCGACGCCGTGAGGAGCAGCGAGCGGGAGAAGCTGAGGATGAACGAGGCGCTGATGAAGTTGCTACTGAGATTGGACTCCGTGCCCGGGGTGGACCCCACGGTGAGGGAGGCGAGGAGGAAGGTGAGCCGTCGGATCGTGGGGCTGCAGGAGATCGTGGACGCGATTGTTCAGGAAGACGTGGAGGGGTTCTGGGGTGGGTGCGGCGGTGGGTTTGGGAGGGACTACTGGAACGACGTCGTGGCGGAGATGGAGGAGGGGGTGTGTAGGGAGAGAGGAGGTGAGGAAATGGAGAGGTTTTGTGCTGAGTATTTGGGGTTTCGCTGCTTACAGAGGTTTCTAAGTCAGCCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005911 GO:0006457 GO:0008150 GO:0009266 GO:0009506 GO:0009605 GO:0009607 GO:0009628 GO:0009987 GO:0030054 GO:0043207 GO:0050896 GO:0055044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BAG IQ

Protein Analysis

202

Amino Acids

23.0

Weight (kDa)

8.76

Isoelectric Point (pI)

54.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BAG PF02179 66 - 140 3.3e-15 BAG domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 495
Acc36I ACCTGC 1 cut(s) 85
AccBSI CCGCTC 1 cut(s) 280
AccI GTMKAC 1 cut(s) 258
AccII CGCG 2 cut(s) 200, 419
AclWI GGATC 3 cut(s) 169, 232, 398
AcoI YGGCCR 1 cut(s) 201
AcyI GRCGYC 2 cut(s) 261, 492
AfaI GTAC 2 cut(s) 114, 120
AfiI CCNNNNNNNGG 4 cut(s) 214, 247, 342, 360
AflIII ACRYGT 1 cut(s) 115
AjiI CACGTC 1 cut(s) 436
AluBI AGCT 2 cut(s) 30, 289
AluI AGCT 2 cut(s) 30, 289
Alw26I GTCTC 1 cut(s) 245
AlwI GGATC 3 cut(s) 169, 232, 398
AlwNI CAGNNNCTG 1 cut(s) 235
Ama87I CYCGRG 1 cut(s) 341
AoxI GGCC 3 cut(s) 156, 201, 216
ApeKI GCWGC 3 cut(s) 273, 400, 579
AspLEI GCGC 2 cut(s) 234, 307
AspS9I GGNCC 1 cut(s) 349
AsuC2I CCSGG 2 cut(s) 342, 343
AsuHPI GGTGA 5 cut(s) 5, 43, 370, 391, 548
AvaI CYCGRG 1 cut(s) 341
AvaII GGWCC 1 cut(s) 349
BaeGI GKGCMC 1 cut(s) 342
BbsI GAAGAC 1 cut(s) 438
BbvCI CCTCAGC 1 cut(s) 290
BbvI GCAGC 3 cut(s) 285, 387, 566
BccI CCATC 2 cut(s) 113, 499
BceAI ACGGC 7 cut(s) 125, 137, 188, 248, 260, 369, 589
BcnI CCSGG 2 cut(s) 342, 343
BcoDI GTCTC 1 cut(s) 245
BfmI CTRYAG 2 cut(s) 187, 401
BfoI RGCGCY 2 cut(s) 235, 308
BfuAI ACCTGC 1 cut(s) 85
BisI GCNGC 8 cut(s) 19, 135, 138, 201, 274, 401, 460, 580
BlsI GCNGC 8 cut(s) 20, 136, 139, 202, 275, 402, 461, 581
Bme1390I CCNGG 2 cut(s) 342, 343
Bme18I GGWCC 1 cut(s) 349
BmeT110I CYCGRG 1 cut(s) 341
BmgBI CACGTC 1 cut(s) 436
BmgT120I GGNCC 1 cut(s) 349
BmiI GGNNCC 2 cut(s) 167, 351
BmrFI CCNGG 2 cut(s) 342, 343
BpiI GAAGAC 1 cut(s) 438
Bpu10I CCTNAGC 1 cut(s) 290
BpuMI CCSGG 2 cut(s) 342, 343
BsaAI YACGTR 1 cut(s) 118
BsaBI GATNNNNATC 1 cut(s) 104
BsaHI GRCGYC 2 cut(s) 261, 492
BsaJI CCNNGG 4 cut(s) 213, 341, 342, 354
BsaWI WCCGGW 1 cut(s) 162
BsaXI ACNNNNNCTCC 2 cut(s) 503, 533
Bsc4I CCNNNNNNNGG 4 cut(s) 214, 247, 342, 360
Bse1I ACTGG 1 cut(s) 488
Bse3DI GCAATG 1 cut(s) 73
Bse8I GATNNNNATC 1 cut(s) 104
BseDI CCNNGG 4 cut(s) 213, 341, 342, 354
BseGI GGATG 1 cut(s) 300
BseJI GATNNNNATC 1 cut(s) 104
BseLI CCNNNNNNNGG 4 cut(s) 214, 247, 342, 360
BseMI GCAATG 1 cut(s) 73
BseMII CTCAG 4 cut(s) 40, 281, 314, 552
BseNI ACTGG 1 cut(s) 488
BseRI GAGGAG 5 cut(s) 25, 283, 385, 524, 546
BseSI GKGCMC 1 cut(s) 342
BseX3I CGGCCG 1 cut(s) 201
BseXI GCAGC 3 cut(s) 285, 387, 566
Bsh1236I CGCG 2 cut(s) 200, 419
Bsh1285I CGRYCG 2 cut(s) 204, 258
BshFI GGCC 3 cut(s) 158, 203, 218
BsiEI CGRYCG 2 cut(s) 204, 258
BsiHKCI CYCGRG 1 cut(s) 341
BsiSI CCGG 2 cut(s) 163, 342
BsiWI CGTACG 1 cut(s) 118
BslFI GGGAC 1 cut(s) 491
BslI CCNNNNNNNGG 4 cut(s) 214, 247, 342, 360
BsmAI GTCTC 1 cut(s) 245
BsmBI CGTCTC 1 cut(s) 245
BsmFI GGGAC 1 cut(s) 491
BsnI GGCC 3 cut(s) 158, 203, 218
BsoBI CYCGRG 1 cut(s) 341
Bsp1286I GDGCHC 1 cut(s) 342
Bsp1407I TGTACA 1 cut(s) 112
Bsp143I GATC 4 cut(s) 174, 237, 390, 408
BspANI GGCC 3 cut(s) 158, 203, 218
BspCNI CTCAG 4 cut(s) 39, 282, 315, 553
BspFNI CGCG 2 cut(s) 200, 419
BspLI GGNNCC 2 cut(s) 167, 351
BspMAI CTGCAG 1 cut(s) 405
BspMI ACCTGC 1 cut(s) 85
BspPI GGATC 3 cut(s) 169, 232, 398
BsrBI CCGCTC 1 cut(s) 280
BsrDI GCAATG 1 cut(s) 73
BsrGI TGTACA 1 cut(s) 112
BsrI ACTGG 1 cut(s) 488
BssECI CCNNGG 4 cut(s) 213, 341, 342, 354
BssMI GATC 4 cut(s) 174, 237, 390, 408
BssNI GRCGYC 2 cut(s) 261, 492
Bst4CI ACNGT 4 cut(s) 49, 112, 256, 358
BstACI GRCGYC 2 cut(s) 261, 492
BstAUI TGTACA 1 cut(s) 112
BstBAI YACGTR 1 cut(s) 118
BstC8I GCNNGC 1 cut(s) 278
BstDEI CTNAG 5 cut(s) 26, 290, 323, 561, 596
BstDSI CCRYGG 1 cut(s) 354
BstF5I GGATG 1 cut(s) 300
BstFNI CGCG 2 cut(s) 200, 419
BstH2I RGCGCY 2 cut(s) 235, 308
BstHHI GCGC 2 cut(s) 234, 307
BstKTI GATC 4 cut(s) 177, 240, 393, 411
BstMAI GTCTC 1 cut(s) 245
BstMBI GATC 4 cut(s) 174, 237, 390, 408
BstMCI CGRYCG 2 cut(s) 204, 258
BstMWI GCNNNNNNNGC 2 cut(s) 27, 286
BstSCI CCNGG 2 cut(s) 340, 341
BstSFI CTRYAG 2 cut(s) 187, 401
BstSLI GKGCMC 1 cut(s) 342
BstUI CGCG 2 cut(s) 200, 419
BstV1I GCAGC 3 cut(s) 285, 387, 566
BstV2I GAAGAC 1 cut(s) 438
BstZI CGGCCG 1 cut(s) 201
BsuRI GGCC 3 cut(s) 158, 203, 218
BtgI CCRYGG 1 cut(s) 354
BtrI CACGTC 1 cut(s) 436
BtsCI GGATG 1 cut(s) 300
BtsIMutI CAGTG 1 cut(s) 108
BveI ACCTGC 1 cut(s) 85
Cac8I GCNNGC 1 cut(s) 278
CaiI CAGNNNCTG 1 cut(s) 235
CfoI GCGC 2 cut(s) 234, 307
Cfr13I GGNCC 1 cut(s) 349
Cfr9I CCCGGG 1 cut(s) 341
CseI GACGC 2 cut(s) 269, 425
Csp6I GTAC 2 cut(s) 113, 119
CviJI RGCY 9 cut(s) 30, 158, 168, 203, 218, 289, 384, 400, 604
CviKI_1 RGCY 9 cut(s) 30, 158, 168, 203, 218, 289, 384, 400, 604
CviQI GTAC 2 cut(s) 113, 119
DdeI CTNAG 5 cut(s) 26, 290, 323, 561, 596
DpnI GATC 4 cut(s) 176, 239, 392, 410
DpnII GATC 4 cut(s) 174, 237, 390, 408
EaeI YGGCCR 1 cut(s) 201
EagI CGGCCG 1 cut(s) 201
EciI GGCGGA 1 cut(s) 515
EclXI CGGCCG 1 cut(s) 201
Eco47I GGWCC 1 cut(s) 349
Eco52I CGGCCG 1 cut(s) 201
Eco88I CYCGRG 1 cut(s) 341
Esp3I CGTCTC 1 cut(s) 245
FaqI GGGAC 1 cut(s) 491
FauI CCCGC 1 cut(s) 273
FblI GTMKAC 1 cut(s) 258
Fnu4HI GCNGC 8 cut(s) 19, 135, 138, 201, 274, 401, 460, 580
FokI GGATG 1 cut(s) 307
Fsp4HI GCNGC 8 cut(s) 19, 135, 138, 201, 274, 401, 460, 580
GlaI GCGC 2 cut(s) 233, 306
GluI GCNGC 8 cut(s) 19, 135, 138, 201, 274, 401, 460, 580
HaeII RGCGCY 2 cut(s) 235, 308
HaeIII GGCC 3 cut(s) 158, 203, 218
HapII CCGG 2 cut(s) 163, 342
HgaI GACGC 2 cut(s) 269, 425
HhaI GCGC 2 cut(s) 234, 307
Hin1I GRCGYC 2 cut(s) 261, 492
Hin6I GCGC 2 cut(s) 232, 305
HinP1I GCGC 2 cut(s) 232, 305
HincII GTYRAC 1 cut(s) 259
HindII GTYRAC 1 cut(s) 259
HinfI GANTC 3 cut(s) 24, 100, 332
HpaII CCGG 2 cut(s) 163, 342
HphI GGTGA 5 cut(s) 5, 43, 370, 391, 548
Hpy166II GTNNAC 4 cut(s) 115, 259, 349, 415
Hpy188I TCNGA 2 cut(s) 214, 390
Hpy188III TCNNGA 1 cut(s) 428
Hpy8I GTNNAC 4 cut(s) 115, 259, 349, 415
Hpy99I CGWCG 5 cut(s) 224, 263, 390, 494, 497
HpyAV CCTTC 1 cut(s) 370
HpyCH4III ACNGT 4 cut(s) 49, 112, 256, 358
HpyCH4IV ACGT 3 cut(s) 117, 435, 492
HpyCH4V TGCA 1 cut(s) 403
HpyF10VI GCNNNNNNNGC 2 cut(s) 27, 286
HpyF3I CTNAG 5 cut(s) 26, 290, 323, 561, 596
HpySE526I ACGT 3 cut(s) 117, 435, 492
Hsp92I GRCGYC 2 cut(s) 261, 492
HspAI GCGC 2 cut(s) 232, 305
Kzo9I GATC 4 cut(s) 174, 237, 390, 408
LmnI GCTCC 2 cut(s) 165, 270
Lsp1109I GCAGC 3 cut(s) 285, 387, 566
MaeII ACGT 3 cut(s) 117, 435, 492
MaeIII GTNAC 1 cut(s) 49
MalI GATC 4 cut(s) 176, 239, 392, 410
MbiI CCGCTC 1 cut(s) 280
MboI GATC 4 cut(s) 174, 237, 390, 408
MboII GAAGA 1 cut(s) 443
MhlI GDGCHC 1 cut(s) 342
MlyI GAGTC 2 cut(s) 18, 326
MmeI TCCRAC 2 cut(s) 265, 368
MspI CCGG 2 cut(s) 163, 342
MspR9I CCNGG 2 cut(s) 342, 343
MvnI CGCG 2 cut(s) 200, 419
MwoI GCNNNNNNNGC 2 cut(s) 27, 286
NciI CCSGG 2 cut(s) 342, 343
NdeII GATC 4 cut(s) 174, 237, 390, 408
NlaIV GGNNCC 2 cut(s) 167, 351
NmuCI GTSAC 1 cut(s) 49
PfeI GAWTC 1 cut(s) 100
Pfl23II CGTACG 1 cut(s) 118
PkrI GCNGC 8 cut(s) 20, 136, 139, 202, 275, 402, 461, 581
PleI GAGTC 2 cut(s) 18, 326
PpsI GAGTC 2 cut(s) 18, 326
Ppu21I YACGTR 1 cut(s) 118
PspLI CGTACG 1 cut(s) 118
PspN4I GGNNCC 2 cut(s) 167, 351
PspPI GGNCC 1 cut(s) 349
PstI CTGCAG 1 cut(s) 405
PstNI CAGNNNCTG 1 cut(s) 235
RsaI GTAC 2 cut(s) 114, 120
RsaNI GTAC 2 cut(s) 113, 119
SalI GTCGAC 1 cut(s) 257
SatI GCNGC 8 cut(s) 19, 135, 138, 201, 274, 401, 460, 580
Sau3AI GATC 4 cut(s) 174, 237, 390, 408
Sau96I GGNCC 1 cut(s) 349
SchI GAGTC 2 cut(s) 18, 326
ScrFI CCNGG 2 cut(s) 342, 343
SduI GDGCHC 1 cut(s) 342
SfcI CTRYAG 2 cut(s) 187, 401
SinI GGWCC 1 cut(s) 349
SmaI CCCGGG 1 cut(s) 343
StyD4I CCNGG 2 cut(s) 340, 341
TaaI ACNGT 4 cut(s) 49, 112, 256, 358
TaiI ACGT 3 cut(s) 120, 438, 495
TaqI TCGA 1 cut(s) 258
TatI WGTACW 1 cut(s) 112
TauI GCSGC 5 cut(s) 21, 137, 140, 203, 462
TfiI GAWTC 1 cut(s) 100
TscAI CASTG 1 cut(s) 115
TseFI GTSAC 1 cut(s) 49
TseI GCWGC 3 cut(s) 273, 400, 579
Tsp45I GTSAC 1 cut(s) 49
TspDTI ATGAA 3 cut(s) 17, 311, 326
TspGWI ACGGA 1 cut(s) 325
TspMI CCCGGG 1 cut(s) 341
TspRI CASTG 1 cut(s) 115
VpaK11BI GGWCC 1 cut(s) 349
XmaI CCCGGG 1 cut(s) 341
XmiI GTMKAC 1 cut(s) 258
ZraI GACGTC 1 cut(s) 493
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.