MD13G1123300.v1.1

BAG family molecular chaperone regulator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
OG0001749
Physical Location & Seq
Reverse (-)
9142916 .. 9143929
1014 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1123300.v1.1.491

Sequence Viewer

Length: 1014 bp
ATGGATCCATTCTTCAGAAGGCATTGGCACAATTTCGCCCCACAACATCAGTACCCGCAGACCAATTTCGCGCCACAACATCAGTACCCGCTGGAGGCGAGGCAAGTCCCGGTCCAGCGCCGAGCGGACCCGTCGCCGAAGGTGGTCTCGATCCCGGTTCAGTACGTCGGGTTGGAGCGCAGGCGGTCCGAGTCGGCGCTGAAAATCCAGAAGGCGTTCAGAGGGTTCCTGGTGAGGAAAAGCGTGAGGAAGATCGCGGCGATCAGAGTCGAGGTCAGCGAGATCGAGAAGCGCATTTCGAAGCGAGAGGCGGTGGAATTGATGAGGAGGGACGCCAAGGAGCGGCTGAAGGTGAACGAGACGCTGATGAACTTGCTGTTGAAGTTGGATTCGGTGAAGGGCGTCGATTCGGGAGTTAGGGATTTCAGGAGGGCCGTGATAAAAAAGGCGATTGCTTTGCAGGAGAGAGTGGACAGCGCTGTTGCTGAAAATCCCCAAATCGACCAAACCCTAGAATTGCAATCCGAATCCCCTGTAAATTCGGATGAGACTCAGAATTCGCAGTCTGTGGAATTGGAATCGGCAGCCGGGCCCCAAATCGAAACTGTCCGACACGGCAATGCGTGGGGGTGCAGAGAGGTAGAAGGCTCTGTGAGTGATAGCGAGTCCTCTGGATCGTCTTGTGATGATTCGCCGAACCCGTTGGAGGATGGGGTGGAGGATGTTAAGGTGGTGGAACGAGAGGAGGTGGCGGAGGAGGAGGGAGCTGGGGAGATTATGAAGGATGATGACAAAAGGAGCAGTAGCAGAGAGCTGCTGGAGAGGGTGGCGGAGGACAACGCGAAGATGATGGGAATGATGGAGGAGCTGTTTGAGAAGAACCAGATGCAGACGCGGATGCTGAGCTCGCTGTCGCAGAGGGTGGAGCAGCTGGAGAGGGCGCTTGTGTGTGAGAGGTTGAGGAGAAGGAAGAGGAGGCATGCTGCTGGAACTGCAGATTTCGTGTCCAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005911 GO:0006457 GO:0008150 GO:0009266 GO:0009506 GO:0009605 GO:0009607 GO:0009628 GO:0009987 GO:0030054 GO:0043207 GO:0050896 GO:0055044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BAG IQ

Protein Analysis

338

Amino Acids

38.42

Weight (kDa)

6.39

Isoelectric Point (pI)

66.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BAG PF02179 85 - 160 9.8e-13 BAG domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 2 cut(s) 125, 343
AccII CGCG 4 cut(s) 71, 257, 842, 895
AclWI GGATC 3 cut(s) 12, 145, 682
AcsI RAATTY 2 cut(s) 538, 556
AcuI CTGAAG 1 cut(s) 368
AcyI GRCGYC 2 cut(s) 333, 402
AfaI GTAC 3 cut(s) 53, 86, 164
AfeI AGCGCT 1 cut(s) 478
AfiI CCNNNNNNNGG 3 cut(s) 94, 342, 706
AgsI TTSAA 1 cut(s) 382
AjnI CCWGG 1 cut(s) 228
AluBI AGCT 5 cut(s) 767, 814, 868, 906, 931
AluI AGCT 5 cut(s) 767, 814, 868, 906, 931
Alw21I GWGCWC 1 cut(s) 908
Alw26I GTCTC 3 cut(s) 151, 353, 542
AlwI GGATC 3 cut(s) 12, 145, 682
Aor51HI AGCGCT 1 cut(s) 478
AoxI GGCC 2 cut(s) 432, 590
ApaI GGGCCC 1 cut(s) 594
ApeKI GCWGC 4 cut(s) 584, 814, 928, 983
ApoI RAATTY 2 cut(s) 538, 556
ArsI GACNNNNNNTTYG 2 cut(s) 541, 573
Asp700I GAANNNNTTC 1 cut(s) 215
AspLEI GCGC 7 cut(s) 73, 120, 180, 199, 294, 479, 943
AspS9I GGNCC 6 cut(s) 112, 127, 186, 432, 590, 591
AsuC2I CCSGG 3 cut(s) 110, 155, 589
AsuHPI GGTGA 3 cut(s) 244, 364, 406
AsuII TTCGAA 1 cut(s) 299
AvaII GGWCC 3 cut(s) 112, 127, 186
BaeGI GKGCMC 1 cut(s) 594
BaeI ACNNNNGTAYC 4 cut(s) 35, 68, 68, 101
BamHI GGATCC 1 cut(s) 4
BanII GRGCYC 2 cut(s) 594, 908
Bbv12I GWGCWC 1 cut(s) 908
BbvI GCAGC 4 cut(s) 596, 801, 940, 970
BccI CCATC 3 cut(s) 704, 844, 853
BceAI ACGGC 2 cut(s) 419, 631
BcgI CGANNNNNNTGC 2 cut(s) 439, 473
BciT130I CCWGG 1 cut(s) 230
BcnI CCSGG 3 cut(s) 110, 155, 589
BcoDI GTCTC 3 cut(s) 151, 353, 542
BfaI CTAG 1 cut(s) 512
BfmI CTRYAG 1 cut(s) 993
BfoI RGCGCY 4 cut(s) 121, 200, 480, 944
BisI GCNGC 6 cut(s) 258, 344, 585, 815, 929, 984
BlpI GCTNAGC 1 cut(s) 902
BlsI GCNGC 6 cut(s) 259, 345, 586, 816, 930, 985
Bme1390I CCNGG 4 cut(s) 110, 155, 230, 589
Bme18I GGWCC 3 cut(s) 112, 127, 186
BmgT120I GGNCC 6 cut(s) 112, 127, 186, 432, 590, 591
BmiI GGNNCC 5 cut(s) 6, 129, 227, 592, 593
BmrFI CCNGG 4 cut(s) 110, 155, 230, 589
BmsI GCATC 2 cut(s) 876, 888
BpmI CTGGAG 3 cut(s) 113, 839, 953
Bpu1102I GCTNAGC 1 cut(s) 902
Bpu14I TTCGAA 1 cut(s) 299
BpuMI CCSGG 3 cut(s) 110, 155, 589
BsaHI GRCGYC 2 cut(s) 333, 402
BsaI GGTCTC 1 cut(s) 151
BsaJI CCNNGG 1 cut(s) 336
BsaXI ACNNNNNCTCC 2 cut(s) 854, 884
Bsc4I CCNNNNNNNGG 3 cut(s) 94, 342, 706
Bse3DI GCAATG 1 cut(s) 625
BseBI CCWGG 1 cut(s) 230
BseDI CCNNGG 1 cut(s) 336
BseGI GGATG 5 cut(s) 550, 715, 727, 790, 903
BseLI CCNNNNNNNGG 3 cut(s) 94, 342, 706
BseMI GCAATG 1 cut(s) 625
BseMII CTCAG 2 cut(s) 566, 893
BseRI GAGGAG 7 cut(s) 340, 758, 770, 773, 878, 976, 988
BseSI GKGCMC 1 cut(s) 594
BseXI GCAGC 4 cut(s) 596, 801, 940, 970
BseYI CCCAGC 1 cut(s) 767
BsgI GTGCAG 1 cut(s) 652
Bsh1236I CGCG 4 cut(s) 71, 257, 842, 895
BshFI GGCC 2 cut(s) 434, 592
BsiHKAI GWGCWC 1 cut(s) 908
BsiSI CCGG 3 cut(s) 110, 155, 588
BslFI GGGAC 2 cut(s) 92, 344
BslI CCNNNNNNNGG 3 cut(s) 94, 342, 706
BsmAI GTCTC 3 cut(s) 151, 353, 542
BsmBI CGTCTC 1 cut(s) 353
BsmFI GGGAC 2 cut(s) 92, 344
BsnI GGCC 2 cut(s) 434, 592
Bso31I GGTCTC 1 cut(s) 151
Bsp119I TTCGAA 1 cut(s) 299
Bsp120I GGGCCC 1 cut(s) 590
Bsp1286I GDGCHC 2 cut(s) 594, 908
Bsp143I GATC 6 cut(s) 4, 150, 252, 261, 282, 674
Bsp1720I GCTNAGC 1 cut(s) 902
BspANI GGCC 2 cut(s) 434, 592
BspCNI CTCAG 2 cut(s) 565, 894
BspFNI CGCG 4 cut(s) 71, 257, 842, 895
BspLI GGNNCC 5 cut(s) 6, 129, 227, 592, 593
BspMAI CTGCAG 1 cut(s) 997
BspPI GGATC 3 cut(s) 12, 145, 682
BspT104I TTCGAA 1 cut(s) 299
BspTNI GGTCTC 1 cut(s) 151
BsrBI CCGCTC 2 cut(s) 125, 343
BsrDI GCAATG 1 cut(s) 625
BssECI CCNNGG 1 cut(s) 336
BssMI GATC 6 cut(s) 4, 150, 252, 261, 282, 674
BssNI GRCGYC 2 cut(s) 333, 402
BssT1I CCWWGG 1 cut(s) 336
Bst2UI CCWGG 1 cut(s) 230
Bst4CI ACNGT 1 cut(s) 607
Bst6I CTCTTC 1 cut(s) 965
BstACI GRCGYC 2 cut(s) 333, 402
BstBI TTCGAA 1 cut(s) 299
BstC8I GCNNGC 3 cut(s) 182, 908, 981
BstDEI CTNAG 2 cut(s) 552, 902
BstF5I GGATG 5 cut(s) 550, 715, 727, 790, 903
BstFNI CGCG 4 cut(s) 71, 257, 842, 895
BstH2I RGCGCY 4 cut(s) 121, 200, 480, 944
BstHHI GCGC 7 cut(s) 73, 120, 180, 199, 294, 479, 943
BstKTI GATC 6 cut(s) 7, 153, 255, 264, 285, 677
BstMAI GTCTC 3 cut(s) 151, 353, 542
BstMBI GATC 6 cut(s) 4, 150, 252, 261, 282, 674
BstMWI GCNNNNNNNGC 2 cut(s) 907, 992
BstNI CCWGG 1 cut(s) 230
BstNSI RCATGY 1 cut(s) 983
BstSCI CCNGG 4 cut(s) 108, 153, 228, 587
BstSFI CTRYAG 1 cut(s) 993
BstSLI GKGCMC 1 cut(s) 594
BstUI CGCG 4 cut(s) 71, 257, 842, 895
BstV1I GCAGC 4 cut(s) 596, 801, 940, 970
BstX2I RGATCY 1 cut(s) 4
BstYI RGATCY 1 cut(s) 4
BsuRI GGCC 2 cut(s) 434, 592
BtsCI GGATG 5 cut(s) 550, 715, 727, 790, 903
Cac8I GCNNGC 3 cut(s) 182, 908, 981
CfoI GCGC 7 cut(s) 73, 120, 180, 199, 294, 479, 943
Cfr13I GGNCC 6 cut(s) 112, 127, 186, 432, 590, 591
CpoI CGGWCCG 1 cut(s) 186
CseI GACGC 4 cut(s) 341, 370, 391, 901
Csp6I GTAC 3 cut(s) 52, 85, 163
CspI CGGWCCG 1 cut(s) 186
CviAII CATG 1 cut(s) 980
CviQI GTAC 3 cut(s) 52, 85, 163
DdeI CTNAG 2 cut(s) 552, 902
DpnI GATC 6 cut(s) 6, 152, 254, 263, 284, 676
DpnII GATC 6 cut(s) 4, 150, 252, 261, 282, 674
Eam1104I CTCTTC 1 cut(s) 965
EarI CTCTTC 1 cut(s) 965
EciI GGCGGA 2 cut(s) 767, 845
Ecl136II GAGCTC 1 cut(s) 906
Eco130I CCWWGG 1 cut(s) 336
Eco24I GRGCYC 2 cut(s) 594, 908
Eco31I GGTCTC 1 cut(s) 151
Eco47I GGWCC 3 cut(s) 112, 127, 186
Eco47III AGCGCT 1 cut(s) 478
Eco53kI GAGCTC 1 cut(s) 906
Eco57I CTGAAG 1 cut(s) 368
EcoICRI GAGCTC 1 cut(s) 906
EcoO109I RGGNCCY 1 cut(s) 591
EcoRI GAATTC 1 cut(s) 556
EcoRII CCWGG 1 cut(s) 228
EcoT14I CCWWGG 1 cut(s) 336
EcoT38I GRGCYC 2 cut(s) 594, 908
ErhI CCWWGG 1 cut(s) 336
Esp3I CGTCTC 1 cut(s) 353
FaeI CATG 1 cut(s) 983
FaiI YATR 2 cut(s) 779, 981
FaqI GGGAC 2 cut(s) 92, 344
FatI CATG 1 cut(s) 979
FauI CCCGC 2 cut(s) 63, 96
Fnu4HI GCNGC 6 cut(s) 258, 344, 585, 815, 929, 984
FokI GGATG 5 cut(s) 557, 722, 734, 797, 910
FriOI GRGCYC 2 cut(s) 594, 908
Fsp4HI GCNGC 6 cut(s) 258, 344, 585, 815, 929, 984
FspBI CTAG 1 cut(s) 512
GlaI GCGC 7 cut(s) 72, 119, 179, 198, 293, 478, 942
GluI GCNGC 6 cut(s) 258, 344, 585, 815, 929, 984
GsaI CCCAGC 1 cut(s) 771
GsuI CTGGAG 3 cut(s) 113, 839, 953
HaeII RGCGCY 4 cut(s) 121, 200, 480, 944
HaeIII GGCC 2 cut(s) 434, 592
HapII CCGG 3 cut(s) 110, 155, 588
HgaI GACGC 4 cut(s) 341, 370, 391, 901
HhaI GCGC 7 cut(s) 73, 120, 180, 199, 294, 479, 943
Hin1I GRCGYC 2 cut(s) 333, 402
Hin1II CATG 1 cut(s) 983
Hin6I GCGC 7 cut(s) 71, 118, 178, 197, 292, 477, 941
HinP1I GCGC 7 cut(s) 71, 118, 178, 197, 292, 477, 941
HinfI GANTC 9 cut(s) 191, 267, 389, 407, 527, 550, 578, 665, 689
HpaII CCGG 3 cut(s) 110, 155, 588
HphI GGTGA 3 cut(s) 244, 364, 406
Hpy166II GTNNAC 2 cut(s) 355, 472
Hpy188I TCNGA 8 cut(s) 17, 190, 221, 266, 526, 544, 555, 611
Hpy188III TCNNGA 6 cut(s) 148, 208, 286, 411, 427, 672
Hpy8I GTNNAC 2 cut(s) 355, 472
Hpy99I CGWCG 3 cut(s) 136, 170, 407
HpyAV CCTTC 8 cut(s) 12, 133, 205, 343, 391, 638, 775, 960
HpyCH4III ACNGT 1 cut(s) 607
HpyCH4IV ACGT 1 cut(s) 165
HpyCH4V TGCA 5 cut(s) 460, 520, 633, 889, 995
HpyF10VI GCNNNNNNNGC 2 cut(s) 907, 992
HpyF3I CTNAG 2 cut(s) 552, 902
HpySE526I ACGT 1 cut(s) 165
Hsp92I GRCGYC 2 cut(s) 333, 402
Hsp92II CATG 1 cut(s) 983
HspAI GCGC 7 cut(s) 71, 118, 178, 197, 292, 477, 941
Kzo9I GATC 6 cut(s) 4, 150, 252, 261, 282, 674
LmnI GCTCC 6 cut(s) 175, 340, 764, 798, 865, 925
Lsp1109I GCAGC 4 cut(s) 596, 801, 940, 970
LweI GCATC 2 cut(s) 876, 888
MaeI CTAG 1 cut(s) 512
MaeII ACGT 1 cut(s) 165
MalI GATC 6 cut(s) 6, 152, 254, 263, 284, 676
MbiI CCGCTC 2 cut(s) 125, 343
MboI GATC 6 cut(s) 4, 150, 252, 261, 282, 674
MboII GAAGA 5 cut(s) 4, 262, 856, 889, 982
MflI RGATCY 1 cut(s) 4
MhlI GDGCHC 2 cut(s) 594, 908
MluCI AATT 7 cut(s) 31, 64, 317, 515, 538, 556, 572
MlyI GAGTC 4 cut(s) 200, 276, 544, 674
MmeI TCCRAC 4 cut(s) 153, 366, 634, 684
MroXI GAANNNNTTC 1 cut(s) 215
MseI TTAA 1 cut(s) 726
MslI CAYNNNNRTG 1 cut(s) 618
MspA1I CMGCKG 2 cut(s) 91, 931
MspI CCGG 3 cut(s) 110, 155, 588
MspR9I CCNGG 4 cut(s) 110, 155, 230, 589
MvaI CCWGG 1 cut(s) 230
MvnI CGCG 4 cut(s) 71, 257, 842, 895
MwoI GCNNNNNNNGC 2 cut(s) 907, 992
NciI CCSGG 3 cut(s) 110, 155, 589
NdeII GATC 6 cut(s) 4, 150, 252, 261, 282, 674
NlaIII CATG 1 cut(s) 983
NlaIV GGNNCC 5 cut(s) 6, 129, 227, 592, 593
NmeAIII GCCGAG 1 cut(s) 146
NspI RCATGY 1 cut(s) 983
NspV TTCGAA 1 cut(s) 299
PaeI GCATGC 1 cut(s) 983
PcsI WCGNNNNNNNCGW 2 cut(s) 276, 698
PdmI GAANNNNTTC 1 cut(s) 215
PfeI GAWTC 5 cut(s) 389, 407, 527, 578, 689
PkrI GCNGC 6 cut(s) 259, 345, 586, 816, 930, 985
PleI GAGTC 4 cut(s) 199, 275, 544, 673
PpsI GAGTC 4 cut(s) 199, 275, 544, 673
Psp124BI GAGCTC 1 cut(s) 908
Psp6I CCWGG 1 cut(s) 228
PspFI CCCAGC 1 cut(s) 767
PspGI CCWGG 1 cut(s) 228
PspN4I GGNNCC 5 cut(s) 6, 129, 227, 592, 593
PspOMI GGGCCC 1 cut(s) 590
PspPI GGNCC 6 cut(s) 112, 127, 186, 432, 590, 591
PstI CTGCAG 1 cut(s) 997
PsuI RGATCY 1 cut(s) 4
PvuII CAGCTG 1 cut(s) 931
RsaI GTAC 3 cut(s) 53, 86, 164
RsaNI GTAC 3 cut(s) 52, 85, 163
RseI CAYNNNNRTG 1 cut(s) 618
Rsr2I CGGWCCG 1 cut(s) 186
RsrII CGGWCCG 1 cut(s) 186
SacI GAGCTC 1 cut(s) 908
SaqAI TTAA 1 cut(s) 726
SatI GCNGC 6 cut(s) 258, 344, 585, 815, 929, 984
Sau3AI GATC 6 cut(s) 4, 150, 252, 261, 282, 674
Sau96I GGNCC 6 cut(s) 112, 127, 186, 432, 590, 591
SchI GAGTC 4 cut(s) 200, 276, 544, 674
ScrFI CCNGG 4 cut(s) 110, 155, 230, 589
SduI GDGCHC 2 cut(s) 594, 908
SfaNI GCATC 2 cut(s) 876, 888
SfcI CTRYAG 1 cut(s) 993
SfuI TTCGAA 1 cut(s) 299
SinI GGWCC 3 cut(s) 112, 127, 186
SmiMI CAYNNNNRTG 1 cut(s) 618
SphI GCATGC 1 cut(s) 983
Sse9I AATT 7 cut(s) 31, 64, 317, 515, 538, 556, 572
SspMI CTAG 1 cut(s) 512
SstI GAGCTC 1 cut(s) 908
StyD4I CCNGG 4 cut(s) 108, 153, 228, 587
StyI CCWWGG 1 cut(s) 336
TaaI ACNGT 1 cut(s) 607
TaiI ACGT 1 cut(s) 168
TaqI TCGA 7 cut(s) 149, 270, 285, 299, 405, 501, 600
TasI AATT 7 cut(s) 31, 64, 317, 515, 538, 556, 572
TauI GCSGC 2 cut(s) 260, 346
TfiI GAWTC 5 cut(s) 389, 407, 527, 578, 689
Tru1I TTAA 1 cut(s) 726
Tru9I TTAA 1 cut(s) 726
TseI GCWGC 4 cut(s) 584, 814, 928, 983
TspDTI ATGAA 2 cut(s) 383, 794
VpaK11BI GGWCC 3 cut(s) 112, 127, 186
XapI RAATTY 2 cut(s) 538, 556
XceI RCATGY 1 cut(s) 983
XmnI GAANNNNTTC 1 cut(s) 215
XspI CTAG 1 cut(s) 512
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.