Rh7BG238800

BAG family molecular chaperone regulator 5

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0001749
Physical Location & Seq
Forward (+)
21145538 .. 21145891
354 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG238800.1

Sequence Viewer

Length: 354 bp
ATGGTCTGCGGCCTCTACAAGACAATCGCGGCCGTCCATTCCGAGGCCGACGAGTTCCAGCGCCTGATCCAACGGCAGCAGACGGTCGACGTCGTGCTGAGCAGCGAGCGGGAGAAGCTGAGGATGAACGAGGCGCTGATGAAGTTGCTGCTGAGTTTGGACTCTGTGCCTGGGGTTGACCCCACGGTGAGGGAGGCAAGGAGGAAGGTGAGCCGTCGGATCGTGGGGCTGCAGGAGATCGTGGACGCGATTGTTCAGGAAGACGTGGAGGGGTTCTGGGGTGGGTGCGGCGGTGGGTTTGGGAGGGACTACTGGAACGACGTCGTGGCGGAGATGGAGGAGGGGGTGGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005911 GO:0006457 GO:0008150 GO:0009266 GO:0009506 GO:0009605 GO:0009607 GO:0009628 GO:0009987 GO:0030054 GO:0043207 GO:0050896 GO:0055044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BAG IQ

Protein Analysis

117

Amino Acids

13.1

Weight (kDa)

4.79

Isoelectric Point (pI)

39.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BAG PF02179 9 - 83 1.2e-14 BAG domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 93, 324
AccBSI CCGCTC 1 cut(s) 109
AccI GTMKAC 1 cut(s) 87
AccII CGCG 2 cut(s) 29, 248
AciI CCGC 6 cut(s) 9, 29, 109, 288, 291, 329
AclWI GGATC 2 cut(s) 61, 227
AcoI YGGCCR 1 cut(s) 30
AcyI GRCGYC 2 cut(s) 90, 321
AfiI CCNNNNNNNGG 2 cut(s) 43, 189
AjiI CACGTC 1 cut(s) 265
AjnI CCWGG 1 cut(s) 169
AluBI AGCT 1 cut(s) 118
AluI AGCT 1 cut(s) 118
AlwI GGATC 2 cut(s) 61, 227
AlwNI CAGNNNCTG 1 cut(s) 64
AoxI GGCC 3 cut(s) 10, 30, 45
ApeKI GCWGC 4 cut(s) 76, 102, 148, 229
AspLEI GCGC 2 cut(s) 63, 136
AsuHPI GGTGA 2 cut(s) 199, 220
BbsI GAAGAC 1 cut(s) 267
BbvCI CCTCAGC 1 cut(s) 119
BbvI GCAGC 4 cut(s) 88, 114, 135, 216
BccI CCATC 1 cut(s) 328
BceAI ACGGC 3 cut(s) 17, 89, 198
BciT130I CCWGG 1 cut(s) 171
BfmI CTRYAG 1 cut(s) 230
BfoI RGCGCY 2 cut(s) 64, 137
BisI GCNGC 7 cut(s) 10, 30, 77, 103, 149, 230, 289
BlpI GCTNAGC 1 cut(s) 98
BlsI GCNGC 7 cut(s) 11, 31, 78, 104, 150, 231, 290
Bme1390I CCNGG 1 cut(s) 171
BmgBI CACGTC 1 cut(s) 265
BmrFI CCNGG 1 cut(s) 171
BpiI GAAGAC 1 cut(s) 267
Bpu10I CCTNAGC 1 cut(s) 119
Bpu1102I GCTNAGC 1 cut(s) 98
BsaHI GRCGYC 2 cut(s) 90, 321
BsaJI CCNNGG 3 cut(s) 42, 170, 183
Bsc4I CCNNNNNNNGG 2 cut(s) 43, 189
Bse1I ACTGG 1 cut(s) 317
BseBI CCWGG 1 cut(s) 171
BseDI CCNNGG 3 cut(s) 42, 170, 183
BseGI GGATG 1 cut(s) 129
BseLI CCNNNNNNNGG 2 cut(s) 43, 189
BseMII CTCAG 3 cut(s) 89, 110, 143
BseNI ACTGG 1 cut(s) 317
BseRI GAGGAG 1 cut(s) 353
BseX3I CGGCCG 1 cut(s) 30
BseXI GCAGC 4 cut(s) 88, 114, 135, 216
Bsh1236I CGCG 2 cut(s) 29, 248
Bsh1285I CGRYCG 2 cut(s) 33, 87
BshFI GGCC 3 cut(s) 12, 32, 47
BsiEI CGRYCG 2 cut(s) 33, 87
BslFI GGGAC 1 cut(s) 320
BslI CCNNNNNNNGG 2 cut(s) 43, 189
BsmFI GGGAC 1 cut(s) 320
BsnI GGCC 3 cut(s) 12, 32, 47
Bsp143I GATC 3 cut(s) 66, 219, 237
Bsp1720I GCTNAGC 1 cut(s) 98
BspACI CCGC 6 cut(s) 9, 29, 109, 288, 291, 329
BspANI GGCC 3 cut(s) 12, 32, 47
BspCNI CTCAG 3 cut(s) 90, 111, 144
BspFNI CGCG 2 cut(s) 29, 248
BspMAI CTGCAG 1 cut(s) 234
BspPI GGATC 2 cut(s) 61, 227
BsrBI CCGCTC 1 cut(s) 109
BsrI ACTGG 1 cut(s) 317
BssECI CCNNGG 3 cut(s) 42, 170, 183
BssMI GATC 3 cut(s) 66, 219, 237
BssNI GRCGYC 2 cut(s) 90, 321
Bst2UI CCWGG 1 cut(s) 171
Bst4CI ACNGT 2 cut(s) 85, 187
BstACI GRCGYC 2 cut(s) 90, 321
BstC8I GCNNGC 1 cut(s) 107
BstDEI CTNAG 3 cut(s) 98, 119, 152
BstDSI CCRYGG 1 cut(s) 183
BstF5I GGATG 1 cut(s) 129
BstFNI CGCG 2 cut(s) 29, 248
BstH2I RGCGCY 2 cut(s) 64, 137
BstHHI GCGC 2 cut(s) 63, 136
BstKTI GATC 3 cut(s) 69, 222, 240
BstMBI GATC 3 cut(s) 66, 219, 237
BstMCI CGRYCG 2 cut(s) 33, 87
BstMWI GCNNNNNNNGC 1 cut(s) 115
BstNI CCWGG 1 cut(s) 171
BstSCI CCNGG 1 cut(s) 169
BstSFI CTRYAG 1 cut(s) 230
BstUI CGCG 2 cut(s) 29, 248
BstV1I GCAGC 4 cut(s) 88, 114, 135, 216
BstV2I GAAGAC 1 cut(s) 267
BstZI CGGCCG 1 cut(s) 30
BsuRI GGCC 3 cut(s) 12, 32, 47
BtgI CCRYGG 1 cut(s) 183
BtrI CACGTC 1 cut(s) 265
BtsCI GGATG 1 cut(s) 129
Cac8I GCNNGC 1 cut(s) 107
CaiI CAGNNNCTG 1 cut(s) 64
CfoI GCGC 2 cut(s) 63, 136
CseI GACGC 1 cut(s) 254
CviJI RGCY 6 cut(s) 12, 32, 47, 118, 213, 229
CviKI_1 RGCY 6 cut(s) 12, 32, 47, 118, 213, 229
DdeI CTNAG 3 cut(s) 98, 119, 152
DpnI GATC 3 cut(s) 68, 221, 239
DpnII GATC 3 cut(s) 66, 219, 237
EaeI YGGCCR 1 cut(s) 30
EagI CGGCCG 1 cut(s) 30
EciI GGCGGA 1 cut(s) 344
EclXI CGGCCG 1 cut(s) 30
Eco52I CGGCCG 1 cut(s) 30
EcoRII CCWGG 1 cut(s) 169
FaqI GGGAC 1 cut(s) 320
FauI CCCGC 1 cut(s) 102
FblI GTMKAC 1 cut(s) 87
Fnu4HI GCNGC 7 cut(s) 10, 30, 77, 103, 149, 230, 289
FokI GGATG 1 cut(s) 136
Fsp4HI GCNGC 7 cut(s) 10, 30, 77, 103, 149, 230, 289
GlaI GCGC 2 cut(s) 62, 135
GluI GCNGC 7 cut(s) 10, 30, 77, 103, 149, 230, 289
HaeII RGCGCY 2 cut(s) 64, 137
HaeIII GGCC 3 cut(s) 12, 32, 47
HgaI GACGC 1 cut(s) 254
HhaI GCGC 2 cut(s) 63, 136
Hin1I GRCGYC 2 cut(s) 90, 321
Hin6I GCGC 2 cut(s) 61, 134
HinP1I GCGC 2 cut(s) 61, 134
HincII GTYRAC 2 cut(s) 88, 178
HindII GTYRAC 2 cut(s) 88, 178
HinfI GANTC 1 cut(s) 161
HphI GGTGA 2 cut(s) 199, 220
Hpy166II GTNNAC 3 cut(s) 88, 178, 244
Hpy188I TCNGA 2 cut(s) 43, 219
Hpy188III TCNNGA 1 cut(s) 257
Hpy8I GTNNAC 3 cut(s) 88, 178, 244
Hpy99I CGWCG 6 cut(s) 53, 92, 95, 219, 323, 326
HpyAV CCTTC 1 cut(s) 199
HpyCH4III ACNGT 2 cut(s) 85, 187
HpyCH4IV ACGT 3 cut(s) 90, 264, 321
HpyCH4V TGCA 1 cut(s) 232
HpyF10VI GCNNNNNNNGC 1 cut(s) 115
HpyF3I CTNAG 3 cut(s) 98, 119, 152
HpySE526I ACGT 3 cut(s) 90, 264, 321
Hsp92I GRCGYC 2 cut(s) 90, 321
HspAI GCGC 2 cut(s) 61, 134
Kzo9I GATC 3 cut(s) 66, 219, 237
LpnPI CCDG 8 cut(s) 71, 77, 156, 183, 218, 242, 262, 298
Lsp1109I GCAGC 4 cut(s) 88, 114, 135, 216
MaeII ACGT 3 cut(s) 90, 264, 321
MalI GATC 3 cut(s) 68, 221, 239
MbiI CCGCTC 1 cut(s) 109
MboI GATC 3 cut(s) 66, 219, 237
MboII GAAGA 1 cut(s) 272
MlyI GAGTC 1 cut(s) 155
MmeI TCCRAC 2 cut(s) 94, 197
MspR9I CCNGG 1 cut(s) 171
MvaI CCWGG 1 cut(s) 171
MvnI CGCG 2 cut(s) 29, 248
MwoI GCNNNNNNNGC 1 cut(s) 115
NdeII GATC 3 cut(s) 66, 219, 237
PkrI GCNGC 7 cut(s) 11, 31, 78, 104, 150, 231, 290
PleI GAGTC 1 cut(s) 155
PpsI GAGTC 1 cut(s) 155
Psp6I CCWGG 1 cut(s) 169
PspGI CCWGG 1 cut(s) 169
PstI CTGCAG 1 cut(s) 234
PstNI CAGNNNCTG 1 cut(s) 64
SalI GTCGAC 1 cut(s) 86
SatI GCNGC 7 cut(s) 10, 30, 77, 103, 149, 230, 289
Sau3AI GATC 3 cut(s) 66, 219, 237
SchI GAGTC 1 cut(s) 155
ScrFI CCNGG 1 cut(s) 171
SetI ASST 5 cut(s) 93, 120, 210, 267, 324
SfcI CTRYAG 1 cut(s) 230
SsiI CCGC 6 cut(s) 9, 29, 109, 288, 291, 329
StyD4I CCNGG 1 cut(s) 169
TaaI ACNGT 2 cut(s) 85, 187
TaiI ACGT 3 cut(s) 93, 267, 324
TaqI TCGA 1 cut(s) 87
TauI GCSGC 3 cut(s) 12, 32, 291
TseI GCWGC 4 cut(s) 76, 102, 148, 229
TspDTI ATGAA 2 cut(s) 140, 155
XmiI GTMKAC 1 cut(s) 87
ZraI GACGTC 2 cut(s) 91, 322
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.