FvH4_5g01641

Cytochrome p450

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
1061335 .. 1065289
3955 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g01641.t6

Sequence Viewer

Length: 1443 bp
ATGTTGGGTGTGTGCATTGTAGCGCTAGTTGCTATAGGGATTACACACTGGGTTTACAGGTGGAGAAATCCCAGATGCAATGGCAAACTTCCACCAGGTTCGATGGGTTGGCCCCTCATAGGCGAGACCTTACAGTACCTTGCTCCCAACTCCTCCTTTGATGTTCCACCTTTCATCAAGACAAGGAGGGAAAGGTATGGACCAATATTCAAGAGTCAATTGATGGGAGCACCATTCATAGTGTCCACAGACCCTGAACTCAATATGTATGTGTTCCAACAAGATGATAAATTGTTTCAAAGTGGGTATCCAGATTCTGTGCAAAAGATATTTGGCAAACAACAGATGGGAAACGTGCATGTGTTGGTATACAAATACCTGAAGAGGATGACGCTAAACCTCATTGGCCCCGAAAGCCTTAAAAAGGCGCTACCTGAAATTGAACAAGCAATACACACAAGTATGCAACAATGGTCATTTCAAGACACTACAGATGTTAAAGAAGCAGCTGCAGATATGATATTTTCCCTCTCTGCAAAGAGACTCATGAGTTATGATTCCAGTAACTCCTCAGATAACCTAAGGGCAAACTTCAGTGCCTTCGCTGATGGACTGATTGCCATCCCTTTGAATATCCCCGGAACAGCTTTTCACAAATGTTTACAGGGTAGGGACAGGGTACTGAGCAGGCTAAAAGACATGCTGCAGGAAAGACGAGCAACATCTCGAAAGCAACCTATTGATTTTTTTGATTATGTCCTTCAAGAACTTGATAAAGAAGGAACAGTGTTAACAGAAGAAATTTGTTTTGATTTGATGTTTCTGCTGCTCTATACAAGTTTTGAAACAACTTCCACAGCAATGACTCTGCTCCTCAAGTTTGTTTCGGAGCATCCTCCGGTGCTAAAGCAATTAACGGAAGAACATGAGAAGATTATAAAGCGAAGAGAAAATGCAAATTCAGGACTTACATGGGAAGAATACAAATCAATGAAATTTACATTGCAGGTCATCAATGAAACCGTTAGACTAGCAAGTCAAGTGCCAGGCATCTTTCGAAAGGCAATAAAAGAAGTACAGTTCAAGGGATATACGATCCCAGAAGGTTGGTCAGTTCTGGTTTGTTTCCAACCCCAGCACTTAAACCCAGAAAAGTATGAAGATCCTCTGGCCTTCAACCCATGGAGATGGGAGGGTAAGGAAAGTGGTGCATCCAAAGATTTTATGGCTTTTGGTGGTGGCTTGAGATCCTGCGTAGGAGCAGAATTTGGTAAGGTGAAGATGGCTGTATTTGTCCATTTCTTAGTCACAAAGTACAGGTGGGAAGTGATAGGAGGCAAGACAGTACGAAATTATACTATCCAATTTCCAGGTGGTTTTCACATCCGGATGCAGCAGAAAGATACAAGGAATGGCGAACAGCCTATAACTCCAGATACTTGA

Protein Analysis

481

Amino Acids

54.88

Weight (kDa)

8.88

Isoelectric Point (pI)

43.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 31 - 401 4.1e-41 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 938
AasI GACNNNNNNGTC 1 cut(s) 1035
Acc36I ACCTGC 1 cut(s) 997
AccI GTMKAC 1 cut(s) 369
AccIII TCCGGA 1 cut(s) 1386
AclWI GGATC 3 cut(s) 1090, 1157, 1242
AcsI RAATTY 4 cut(s) 801, 958, 995, 1265
AcuI CTGAAG 2 cut(s) 401, 577
AfaI GTAC 5 cut(s) 137, 681, 1077, 1316, 1347
AfeI AGCGCT 1 cut(s) 24
AfiI CCNNNNNNNGG 2 cut(s) 119, 424
AgsI TTSAA 9 cut(s) 211, 299, 443, 482, 631, 764, 845, 1084, 1177
AjnI CCWGG 3 cut(s) 94, 1045, 1369
AluBI AGCT 2 cut(s) 509, 647
AluI AGCT 2 cut(s) 509, 647
Alw21I GWGCWC 1 cut(s) 232
Alw26I GTCTC 2 cut(s) 119, 535
AlwI GGATC 3 cut(s) 1090, 1157, 1242
AlwNI CAGNNNCTG 2 cut(s) 254, 317
Aor13HI TCCGGA 1 cut(s) 1386
Aor51HI AGCGCT 1 cut(s) 24
AoxI GGCC 3 cut(s) 110, 406, 1170
ApeKI GCWGC 5 cut(s) 506, 509, 703, 826, 1393
ApoI RAATTY 4 cut(s) 801, 958, 995, 1265
AspLEI GCGC 2 cut(s) 25, 430
AspS9I GGNCC 3 cut(s) 111, 200, 407
AsuC2I CCSGG 1 cut(s) 639
AsuHPI GGTGA 1 cut(s) 1288
AsuII TTCGAA 1 cut(s) 1057
AvaII GGWCC 1 cut(s) 200
AxyI CCTNAGG 1 cut(s) 581
Bbv12I GWGCWC 1 cut(s) 232
BbvI GCAGC 5 cut(s) 496, 518, 690, 813, 1405
BccI CCATC 7 cut(s) 97, 217, 340, 602, 629, 1182, 1276
BciT130I CCWGG 3 cut(s) 96, 1047, 1371
BciVI GTATCC 1 cut(s) 318
BcnI CCSGG 1 cut(s) 639
BcoDI GTCTC 2 cut(s) 119, 535
BfaI CTAG 2 cut(s) 26, 1031
BfmI CTRYAG 4 cut(s) 33, 489, 510, 704
BfoI RGCGCY 2 cut(s) 26, 431
BfuAI ACCTGC 1 cut(s) 997
BfuI GTATCC 1 cut(s) 318
BisI GCNGC 5 cut(s) 507, 510, 704, 827, 1394
BlsI GCNGC 5 cut(s) 508, 511, 705, 828, 1395
Bme1390I CCNGG 4 cut(s) 96, 639, 1047, 1371
Bme18I GGWCC 1 cut(s) 200
BmgT120I GGNCC 3 cut(s) 111, 200, 407
BmiI GGNNCC 2 cut(s) 113, 409
BmrFI CCNGG 4 cut(s) 96, 639, 1047, 1371
BmrI ACTGGG 1 cut(s) 58
BmsI GCATC 5 cut(s) 65, 901, 1059, 1220, 1380
BmuI ACTGGG 1 cut(s) 58
BpmI CTGGAG 1 cut(s) 1416
Bpu14I TTCGAA 1 cut(s) 1057
BpuEI CTTGAG 2 cut(s) 860, 1264
BpuMI CCSGG 1 cut(s) 639
BsaBI GATNNNNATC 1 cut(s) 620
BsaI GGTCTC 1 cut(s) 119
BsaJI CCNNGG 2 cut(s) 637, 1181
BsaWI WCCGGW 2 cut(s) 898, 1386
Bsc4I CCNNNNNNNGG 2 cut(s) 119, 424
Bse1I ACTGG 2 cut(s) 53, 561
Bse21I CCTNAGG 1 cut(s) 581
Bse3DI GCAATG 3 cut(s) 85, 867, 1001
Bse8I GATNNNNATC 1 cut(s) 620
BseAI TCCGGA 1 cut(s) 1386
BseBI CCWGG 3 cut(s) 96, 1047, 1371
BseDI CCNNGG 2 cut(s) 637, 1181
BseGI GGATG 6 cut(s) 393, 621, 892, 1211, 1383, 1395
BseJI GATNNNNATC 1 cut(s) 620
BseLI CCNNNNNNNGG 2 cut(s) 119, 424
BseMI GCAATG 3 cut(s) 85, 867, 1001
BseMII CTCAG 2 cut(s) 585, 674
BseNI ACTGG 2 cut(s) 53, 561
BseRI GAGGAG 3 cut(s) 142, 559, 863
BseXI GCAGC 5 cut(s) 496, 518, 690, 813, 1405
BseYI CCCAGC 1 cut(s) 1134
BshFI GGCC 3 cut(s) 112, 408, 1172
BsiHKAI GWGCWC 1 cut(s) 232
BsiSI CCGG 3 cut(s) 639, 899, 1387
BslFI GGGAC 1 cut(s) 686
BslI CCNNNNNNNGG 2 cut(s) 119, 424
BsmAI GTCTC 2 cut(s) 119, 535
BsmFI GGGAC 1 cut(s) 686
BsnI GGCC 3 cut(s) 112, 408, 1172
Bso31I GGTCTC 1 cut(s) 119
Bsp119I TTCGAA 1 cut(s) 1057
Bsp1286I GDGCHC 1 cut(s) 232
Bsp13I TCCGGA 1 cut(s) 1386
Bsp143I GATC 3 cut(s) 1095, 1162, 1247
Bsp19I CCATGG 1 cut(s) 1181
BspANI GGCC 3 cut(s) 112, 408, 1172
BspCNI CTCAG 2 cut(s) 584, 675
BspEI TCCGGA 1 cut(s) 1386
BspHI TCATGA 1 cut(s) 546
BspLI GGNNCC 2 cut(s) 113, 409
BspMAI CTGCAG 2 cut(s) 514, 708
BspMI ACCTGC 1 cut(s) 997
BspPI GGATC 3 cut(s) 1090, 1157, 1242
BspT104I TTCGAA 1 cut(s) 1057
BspTNI GGTCTC 1 cut(s) 119
BsrDI GCAATG 3 cut(s) 85, 867, 1001
BsrI ACTGG 2 cut(s) 53, 561
BssECI CCNNGG 2 cut(s) 637, 1181
BssMI GATC 3 cut(s) 1095, 1162, 1247
BssNAI GTATAC 1 cut(s) 370
BssT1I CCWWGG 1 cut(s) 1181
Bst1107I GTATAC 1 cut(s) 370
Bst2UI CCWGG 3 cut(s) 96, 1047, 1371
Bst4CI ACNGT 5 cut(s) 135, 787, 1024, 1080, 1345
Bst6I CTCTTC 2 cut(s) 377, 940
BstBI TTCGAA 1 cut(s) 1057
BstC8I GCNNGC 1 cut(s) 689
BstDEI CTNAG 4 cut(s) 571, 581, 683, 1303
BstDSI CCRYGG 1 cut(s) 1181
BstENI CCTNNNNNAGG 1 cut(s) 422
BstF5I GGATG 6 cut(s) 393, 621, 892, 1211, 1383, 1395
BstH2I RGCGCY 2 cut(s) 26, 431
BstHHI GCGC 2 cut(s) 25, 430
BstKTI GATC 3 cut(s) 1098, 1165, 1250
BstMAI GTCTC 2 cut(s) 119, 535
BstMBI GATC 3 cut(s) 1095, 1162, 1247
BstMWI GCNNNNNNNGC 2 cut(s) 29, 414
BstNI CCWGG 3 cut(s) 96, 1047, 1371
BstNSI RCATGY 2 cut(s) 362, 703
BstSCI CCNGG 4 cut(s) 94, 637, 1045, 1369
BstSFI CTRYAG 4 cut(s) 33, 489, 510, 704
BstV1I GCAGC 5 cut(s) 496, 518, 690, 813, 1405
BstX2I RGATCY 2 cut(s) 1162, 1247
BstXI CCANNNNNNTGG 2 cut(s) 1107, 1188
BstYI RGATCY 2 cut(s) 1162, 1247
BstZ17I GTATAC 1 cut(s) 370
Bsu36I CCTNAGG 1 cut(s) 581
BsuI GTATCC 1 cut(s) 318
BsuRI GGCC 3 cut(s) 112, 408, 1172
BtgI CCRYGG 1 cut(s) 1181
BtsCI GGATG 6 cut(s) 393, 621, 892, 1211, 1383, 1395
BtsIMutI CAGTG 3 cut(s) 46, 601, 792
BveI ACCTGC 1 cut(s) 997
Cac8I GCNNGC 1 cut(s) 689
CaiI CAGNNNCTG 2 cut(s) 254, 317
CciI TCATGA 1 cut(s) 546
CfoI GCGC 2 cut(s) 25, 430
Cfr13I GGNCC 3 cut(s) 111, 200, 407
CseI GACGC 1 cut(s) 400
CsiI ACCWGGT 1 cut(s) 94
Csp6I GTAC 5 cut(s) 136, 680, 1076, 1315, 1346
CviAII CATG 6 cut(s) 359, 547, 700, 926, 972, 1182
CviQI GTAC 5 cut(s) 136, 680, 1076, 1315, 1346
DdeI CTNAG 4 cut(s) 571, 581, 683, 1303
DpnI GATC 3 cut(s) 1097, 1164, 1249
DpnII GATC 3 cut(s) 1095, 1162, 1247
DrdI GACNNNNNNGTC 1 cut(s) 1035
DseDI GACNNNNNNGTC 1 cut(s) 1035
Eam1104I CTCTTC 2 cut(s) 377, 940
EarI CTCTTC 2 cut(s) 377, 940
Eco130I CCWWGG 1 cut(s) 1181
Eco31I GGTCTC 1 cut(s) 119
Eco47I GGWCC 1 cut(s) 200
Eco47III AGCGCT 1 cut(s) 24
Eco57I CTGAAG 2 cut(s) 401, 577
Eco81I CCTNAGG 1 cut(s) 581
EcoNI CCTNNNNNAGG 1 cut(s) 422
EcoRII CCWGG 3 cut(s) 94, 1045, 1369
EcoT14I CCWWGG 1 cut(s) 1181
ErhI CCWWGG 1 cut(s) 1181
FaeI CATG 6 cut(s) 362, 550, 703, 929, 975, 1185
FaqI GGGAC 1 cut(s) 686
FatI CATG 6 cut(s) 358, 546, 699, 925, 971, 1181
FblI GTMKAC 1 cut(s) 369
Fnu4HI GCNGC 5 cut(s) 507, 510, 704, 827, 1394
FokI GGATG 6 cut(s) 400, 608, 879, 1198, 1370, 1402
Fsp4HI GCNGC 5 cut(s) 507, 510, 704, 827, 1394
FspBI CTAG 2 cut(s) 26, 1031
GlaI GCGC 2 cut(s) 24, 429
GluI GCNGC 5 cut(s) 507, 510, 704, 827, 1394
GsaI CCCAGC 1 cut(s) 1138
GsuI CTGGAG 1 cut(s) 1416
HaeII RGCGCY 2 cut(s) 26, 431
HaeIII GGCC 3 cut(s) 112, 408, 1172
HapII CCGG 3 cut(s) 639, 899, 1387
HgaI GACGC 1 cut(s) 400
HhaI GCGC 2 cut(s) 25, 430
Hin1II CATG 6 cut(s) 362, 550, 703, 929, 975, 1185
Hin6I GCGC 2 cut(s) 23, 428
HinP1I GCGC 2 cut(s) 23, 428
HincII GTYRAC 1 cut(s) 792
HindII GTYRAC 1 cut(s) 792
HinfI GANTC 5 cut(s) 214, 314, 543, 557, 865
HpaI GTTAAC 1 cut(s) 792
HpaII CCGG 3 cut(s) 639, 899, 1387
HphI GGTGA 1 cut(s) 1288
Hpy166II GTNNAC 5 cut(s) 55, 246, 370, 662, 792
Hpy188I TCNGA 2 cut(s) 574, 889
Hpy8I GTNNAC 5 cut(s) 55, 246, 370, 662, 792
HpyAV CCTTC 5 cut(s) 610, 770, 773, 1097, 1183
HpyCH4III ACNGT 5 cut(s) 135, 787, 1024, 1080, 1345
HpyCH4IV ACGT 1 cut(s) 354
HpyF10VI GCNNNNNNNGC 2 cut(s) 29, 414
HpyF3I CTNAG 4 cut(s) 571, 581, 683, 1303
HpySE526I ACGT 1 cut(s) 354
Hsp92II CATG 6 cut(s) 362, 550, 703, 929, 975, 1185
HspAI GCGC 2 cut(s) 23, 428
Kpn2I TCCGGA 1 cut(s) 1386
KspAI GTTAAC 1 cut(s) 792
Kzo9I GATC 3 cut(s) 1095, 1162, 1247
LmnI GCTCC 5 cut(s) 148, 227, 876, 889, 1259
Lsp1109I GCAGC 5 cut(s) 496, 518, 690, 813, 1405
LweI GCATC 5 cut(s) 65, 901, 1059, 1220, 1380
MabI ACCWGGT 1 cut(s) 94
MaeI CTAG 2 cut(s) 26, 1031
MaeII ACGT 1 cut(s) 354
MaeIII GTNAC 2 cut(s) 563, 1306
MalI GATC 3 cut(s) 1097, 1164, 1249
MboI GATC 3 cut(s) 1095, 1162, 1247
MboII GAAGA 8 cut(s) 394, 809, 932, 943, 957, 989, 1172, 1291
MfeI CAATTG 1 cut(s) 218
MflI RGATCY 2 cut(s) 1162, 1247
MhlI GDGCHC 1 cut(s) 232
MlyI GAGTC 3 cut(s) 223, 537, 859
MmeI TCCRAC 2 cut(s) 301, 1153
MroI TCCGGA 1 cut(s) 1386
MseI TTAA 5 cut(s) 420, 498, 791, 914, 1142
MslI CAYNNNNRTG 4 cut(s) 461, 860, 1186, 1388
MspA1I CMGCKG 1 cut(s) 509
MspI CCGG 3 cut(s) 639, 899, 1387
MspR9I CCNGG 4 cut(s) 96, 639, 1047, 1371
MunI CAATTG 1 cut(s) 218
MvaI CCWGG 3 cut(s) 96, 1047, 1371
MwoI GCNNNNNNNGC 2 cut(s) 29, 414
NciI CCSGG 1 cut(s) 639
NcoI CCATGG 1 cut(s) 1181
NdeII GATC 3 cut(s) 1095, 1162, 1247
NlaIII CATG 6 cut(s) 362, 550, 703, 929, 975, 1185
NlaIV GGNNCC 2 cut(s) 113, 409
NmuCI GTSAC 1 cut(s) 1306
NspI RCATGY 2 cut(s) 362, 703
NspV TTCGAA 1 cut(s) 1057
PagI TCATGA 1 cut(s) 546
PfeI GAWTC 2 cut(s) 314, 557
PkrI GCNGC 5 cut(s) 508, 511, 705, 828, 1395
PleI GAGTC 3 cut(s) 222, 537, 859
PpsI GAGTC 3 cut(s) 222, 537, 859
PsiI TTATAA 1 cut(s) 938
Psp6I CCWGG 3 cut(s) 94, 1045, 1369
PspFI CCCAGC 1 cut(s) 1134
PspGI CCWGG 3 cut(s) 94, 1045, 1369
PspN4I GGNNCC 2 cut(s) 113, 409
PspPI GGNCC 3 cut(s) 111, 200, 407
PsrI GAACNNNNNNTAC 2 cut(s) 435, 467
PstI CTGCAG 2 cut(s) 514, 708
PstNI CAGNNNCTG 2 cut(s) 254, 317
PsuI RGATCY 2 cut(s) 1162, 1247
PvuII CAGCTG 1 cut(s) 509
RsaI GTAC 5 cut(s) 137, 681, 1077, 1316, 1347
RsaNI GTAC 5 cut(s) 136, 680, 1076, 1315, 1346
RseI CAYNNNNRTG 4 cut(s) 461, 860, 1186, 1388
SaqAI TTAA 5 cut(s) 420, 498, 791, 914, 1142
SatI GCNGC 5 cut(s) 507, 510, 704, 827, 1394
Sau3AI GATC 3 cut(s) 1095, 1162, 1247
Sau96I GGNCC 3 cut(s) 111, 200, 407
SchI GAGTC 3 cut(s) 223, 537, 859
ScrFI CCNGG 4 cut(s) 96, 639, 1047, 1371
SduI GDGCHC 1 cut(s) 232
SexAI ACCWGGT 1 cut(s) 94
SfaNI GCATC 5 cut(s) 65, 901, 1059, 1220, 1380
SfcI CTRYAG 4 cut(s) 33, 489, 510, 704
SfuI TTCGAA 1 cut(s) 1057
SinI GGWCC 1 cut(s) 200
SmiMI CAYNNNNRTG 4 cut(s) 461, 860, 1186, 1388
SmlI CTYRAG 2 cut(s) 875, 1243
SmoI CTYRAG 2 cut(s) 875, 1243
SspI AATATT 1 cut(s) 207
SspMI CTAG 2 cut(s) 26, 1031
StyD4I CCNGG 4 cut(s) 94, 637, 1045, 1369
StyI CCWWGG 1 cut(s) 1181
TaaI ACNGT 5 cut(s) 135, 787, 1024, 1080, 1345
TaiI ACGT 1 cut(s) 357
TaqI TCGA 3 cut(s) 101, 727, 1057
TatI WGTACW 2 cut(s) 1075, 1314
TfiI GAWTC 2 cut(s) 314, 557
Tru1I TTAA 5 cut(s) 420, 498, 791, 914, 1142
Tru9I TTAA 5 cut(s) 420, 498, 791, 914, 1142
TscAI CASTG 3 cut(s) 53, 601, 792
TseFI GTSAC 1 cut(s) 1306
TseI GCWGC 5 cut(s) 506, 509, 703, 826, 1393
Tsp45I GTSAC 1 cut(s) 1306
TspDTI ATGAA 5 cut(s) 163, 226, 1007, 1032, 1173
TspGWI ACGGA 1 cut(s) 932
TspRI CASTG 3 cut(s) 53, 601, 792
VpaK11BI GGWCC 1 cut(s) 200
XagI CCTNNNNNAGG 1 cut(s) 422
XapI RAATTY 4 cut(s) 801, 958, 995, 1265
XceI RCATGY 2 cut(s) 362, 703
XcmI CCANNNNNNNNNTGG 2 cut(s) 1222, 1370
XmiI GTMKAC 1 cut(s) 369
XspI CTAG 2 cut(s) 26, 1031
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.