RLG00000003815

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
53052434 .. 53054673
2240 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003815

Sequence Viewer

Length: 1452 bp
ATGTGGGCCTTGTGCTTTGGAGCATTGGTTGTTATAAGCATTACTCATTGGGTTTACAGGTGGAGGAATCCCAAATGCAATGGCAAGCTTCCACCAGGTTCAATGGGATTGCCACTTATTGGGGAGACTTTACAGTTCTTCACTCCCAACACCTCTTCTGATATTCCTCCCTTCATCAAGAAAAGGATGGAAAGGTATGGGCCAATTTTCAGGACTAATTTGGTGGGAAGACCAGTAATAGTATCAACAGACCCGGATCTCAATTACTTTGTATTCCAACAAGAGGGTAATTTGTTTCATAGCTCATATCCTTATACCTTCACGGAGATTTTTGGTAGACAAAACGTAGGTAACTTGCATGGGATCACGTACAAGTACCTCAAGAACATAGTGCTGCATCTCTTTGGCCCTGAAAGCCTTAAAAAGATGATCCCAGAAATTGAAGAGGCAGCACTCAGAAGATTACGACAATGGTCATGTGAGGACACAATAGAATTCAAAGATGCATCTGCAAGTTTGATATTTGATCTTACCGCAAAGAAACTTATCAGTTATGACTCAGAAAAGTGCTCGGAGAAGAATTTACGCAAAAACTTTGTTGCATTCATACAAGGATTGATTTCCTTCCCTGTGGACATCCCTGGAACAGCTTATCACAAATGTTTACAGGGTAGGAAAAATGCAATGAGAATGTTGGTAAACCTGCTACAGGAAAGACGAGAAAAGCCGCGAAAGCAGCCTATAGATTTTTTCGATCACGTGCTTGAAGAACTCAAGAAAGAGGAAACGATGTTAACAGAAGAAATTTTTCTGGATTTAATGTTTGTACTGCTTTTTGCGAGCTTTGAAACAACTTCCCTAGCTCTAACATTAGCCATCAAGTTTCTTTCAGACCATCCTGCAGTGCTAAAGAAATTAACGGAAGAGCATGGGATGATCATAAAGCAAAGGGAAAATGCTGATGCTGGACTTACATGGAAAGAATACAAATCAATGACATTCACATTTCAGATCATCAACGAAACAGTTAGACTGGCAAATATAGTTCCAGCTATCTTTCGCAAAGCAATAAGAGAGATACAGTTTAAAGGACATACCATTCCAGCAGGTTGGGCAGTAATGGTTTGTCCCCCGGCCGTACACTTAAACCCTCAAAAGTATGATGATCCTGTGGCCTTCAATCCAGGGAGATGGGAGGGAATGTTAACAAGTAGTGCATCAAAAAATTTCATGGCTTTTGGCGGTGGCATGAGATTCTGTGTTGGAACAGACTTTGCTAAGGTGCAGATGGCTGTATTTCTGCATTGCTTGGTGACCAAGTACAGGTGGCAAGCAGTGGGGGGAGGAAACATAGTCCGTACTCCGGGTTTACAATTCCCGGATGGTTTTCACATTCGAATAGAGGAGAAAGAAGATACAAGTAACAGGAAACAGCAAACTCCAGATGGTTGA

Protein Analysis

484

Amino Acids

55.28

Weight (kDa)

9.06

Isoelectric Point (pI)

43.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 31 - 449 5.8e-63 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 35
Acc36I ACCTGC 2 cut(s) 711, 1097
AccB7I CCANNNNNTGG 1 cut(s) 119
AccI GTMKAC 1 cut(s) 337
AccII CGCG 1 cut(s) 730
AciI CCGC 3 cut(s) 534, 728, 1242
AclWI GGATC 4 cut(s) 264, 371, 424, 1160
AcoI YGGCCR 1 cut(s) 1134
AcsI RAATTY 4 cut(s) 494, 580, 804, 1225
AcvI CACGTG 1 cut(s) 760
AfaI GTAC 6 cut(s) 371, 377, 828, 1140, 1322, 1360
AfiI CCNNNNNNNGG 5 cut(s) 119, 283, 709, 1323, 1363
AgsI TTSAA 6 cut(s) 102, 443, 499, 767, 848, 1180
AjnI CCWGG 3 cut(s) 94, 640, 1183
AluBI AGCT 6 cut(s) 88, 303, 650, 843, 863, 1052
AluI AGCT 6 cut(s) 88, 303, 650, 843, 863, 1052
Alw21I GWGCWC 1 cut(s) 572
Alw26I GTCTC 1 cut(s) 119
AlwI GGATC 4 cut(s) 264, 371, 424, 1160
AoxI GGCC 5 cut(s) 6, 200, 406, 1134, 1173
ApeKI GCWGC 3 cut(s) 394, 449, 736
ApoI RAATTY 4 cut(s) 494, 580, 804, 1225
Asp700I GAANNNNTTC 1 cut(s) 807
AspS9I GGNCC 3 cut(s) 6, 200, 407
AsuC2I CCSGG 4 cut(s) 254, 1133, 1365, 1379
AsuHPI GGTGA 1 cut(s) 1324
AsuII TTCGAA 1 cut(s) 1396
BbrPI CACGTG 1 cut(s) 760
BbsI GAAGAC 1 cut(s) 235
Bbv12I GWGCWC 1 cut(s) 572
BbvI GCAGC 3 cut(s) 381, 461, 748
BccI CCATC 7 cut(s) 181, 884, 903, 1185, 1282, 1376, 1439
BceAI ACGGC 1 cut(s) 1121
BciT130I CCWGG 3 cut(s) 96, 642, 1185
BclI TGATCA 1 cut(s) 936
BcnI CCSGG 4 cut(s) 254, 1133, 1365, 1379
BcoDI GTCTC 1 cut(s) 119
BfaI CTAG 1 cut(s) 860
BfmI CTRYAG 3 cut(s) 707, 741, 900
BfuAI ACCTGC 2 cut(s) 711, 1097
BisI GCNGC 4 cut(s) 395, 450, 728, 737
BlsI GCNGC 4 cut(s) 396, 451, 729, 738
Bme1390I CCNGG 7 cut(s) 96, 254, 642, 1133, 1185, 1365, 1379
BmgT120I GGNCC 3 cut(s) 6, 200, 407
BmrFI CCNGG 7 cut(s) 96, 254, 642, 1133, 1185, 1365, 1379
BmsI GCATC 5 cut(s) 406, 493, 515, 952, 1226
BoxI GACNNNNGTC 1 cut(s) 472
BpiI GAAGAC 1 cut(s) 235
BpmI CTGGAG 1 cut(s) 1425
Bpu10I CCTNAGC 1 cut(s) 1278
Bpu14I TTCGAA 1 cut(s) 1396
BpuEI CTTGAG 2 cut(s) 365, 758
BpuMI CCSGG 4 cut(s) 254, 1133, 1365, 1379
BsaAI YACGTR 2 cut(s) 369, 760
BsaJI CCNNGG 3 cut(s) 640, 1131, 1184
BsaXI ACNNNNNCTCC 4 cut(s) 12, 42, 1187, 1217
Bsc4I CCNNNNNNNGG 5 cut(s) 119, 283, 709, 1323, 1363
Bse1I ACTGG 2 cut(s) 233, 1038
Bse3DI GCAATG 3 cut(s) 85, 690, 1303
BseBI CCWGG 3 cut(s) 96, 642, 1185
BseDI CCNNGG 3 cut(s) 640, 1131, 1184
BseGI GGATG 5 cut(s) 192, 636, 895, 939, 1387
BseLI CCNNNNNNNGG 5 cut(s) 119, 283, 709, 1323, 1363
BseMI GCAATG 3 cut(s) 85, 690, 1303
BseMII CTCAG 2 cut(s) 469, 573
BseNI ACTGG 2 cut(s) 233, 1038
BseRI GAGGAG 1 cut(s) 1418
BseX3I CGGCCG 1 cut(s) 1134
BseXI GCAGC 3 cut(s) 381, 461, 748
BsgI GTGCAG 1 cut(s) 1304
Bsh1236I CGCG 1 cut(s) 730
Bsh1285I CGRYCG 1 cut(s) 1137
BshFI GGCC 5 cut(s) 8, 202, 408, 1136, 1175
BsiEI CGRYCG 1 cut(s) 1137
BsiHKAI GWGCWC 1 cut(s) 572
BsiSI CCGG 4 cut(s) 254, 1133, 1364, 1379
BslFI GGGAC 1 cut(s) 1113
BslI CCNNNNNNNGG 5 cut(s) 119, 283, 709, 1323, 1363
BsmAI GTCTC 1 cut(s) 119
BsmFI GGGAC 1 cut(s) 1113
BsmI GAATGC 1 cut(s) 602
BsnI GGCC 5 cut(s) 8, 202, 408, 1136, 1175
Bsp119I TTCGAA 1 cut(s) 1396
Bsp1286I GDGCHC 1 cut(s) 572
Bsp143I GATC 8 cut(s) 256, 363, 429, 526, 754, 936, 1011, 1165
BspACI CCGC 3 cut(s) 534, 728, 1242
BspANI GGCC 5 cut(s) 8, 202, 408, 1136, 1175
BspCNI CTCAG 2 cut(s) 468, 572
BspFNI CGCG 1 cut(s) 730
BspMAI CTGCAG 1 cut(s) 904
BspMI ACCTGC 2 cut(s) 711, 1097
BspPI GGATC 4 cut(s) 264, 371, 424, 1160
BspQI GCTCTTC 1 cut(s) 918
BspT104I TTCGAA 1 cut(s) 1396
BsrDI GCAATG 3 cut(s) 85, 690, 1303
BsrI ACTGG 2 cut(s) 233, 1038
BssECI CCNNGG 3 cut(s) 640, 1131, 1184
BssMI GATC 8 cut(s) 256, 363, 429, 526, 754, 936, 1011, 1165
Bst2UI CCWGG 3 cut(s) 96, 642, 1185
Bst4CI ACNGT 3 cut(s) 135, 1027, 1083
Bst6I CTCTTC 3 cut(s) 160, 438, 918
BstBAI YACGTR 2 cut(s) 369, 760
BstBI TTCGAA 1 cut(s) 1396
BstC8I GCNNGC 3 cut(s) 86, 841, 1332
BstDEI CTNAG 3 cut(s) 455, 559, 1278
BstEII GGTNACC 1 cut(s) 1312
BstENI CCTNNNNNAGG 1 cut(s) 707
BstF5I GGATG 5 cut(s) 192, 636, 895, 939, 1387
BstFNI CGCG 1 cut(s) 730
BstKTI GATC 8 cut(s) 259, 366, 432, 529, 757, 939, 1014, 1168
BstMAI GTCTC 1 cut(s) 119
BstMBI GATC 8 cut(s) 256, 363, 429, 526, 754, 936, 1011, 1165
BstMCI CGRYCG 1 cut(s) 1137
BstMWI GCNNNNNNNGC 4 cut(s) 414, 733, 736, 1112
BstNI CCWGG 3 cut(s) 96, 642, 1185
BstPAI GACNNNNGTC 1 cut(s) 472
BstPI GGTNACC 1 cut(s) 1312
BstSCI CCNGG 7 cut(s) 94, 252, 640, 1131, 1183, 1363, 1377
BstSFI CTRYAG 3 cut(s) 707, 741, 900
BstUI CGCG 1 cut(s) 730
BstV1I GCAGC 3 cut(s) 381, 461, 748
BstV2I GAAGAC 1 cut(s) 235
BstX2I RGATCY 1 cut(s) 256
BstXI CCANNNNNNTGG 2 cut(s) 1110, 1191
BstYI RGATCY 1 cut(s) 256
BstZI CGGCCG 1 cut(s) 1134
BsuRI GGCC 5 cut(s) 8, 202, 408, 1136, 1175
BtsCI GGATG 5 cut(s) 192, 636, 895, 939, 1387
BtsI GCAGTG 2 cut(s) 909, 1341
BtsIMutI CAGTG 2 cut(s) 909, 1341
BveI ACCTGC 2 cut(s) 711, 1097
Cac8I GCNNGC 3 cut(s) 86, 841, 1332
Cfr13I GGNCC 3 cut(s) 6, 200, 407
CsiI ACCWGGT 1 cut(s) 94
Csp6I GTAC 6 cut(s) 370, 376, 827, 1139, 1321, 1359
CviAII CATG 6 cut(s) 359, 477, 929, 975, 1231, 1249
CviQI GTAC 6 cut(s) 370, 376, 827, 1139, 1321, 1359
DdeI CTNAG 3 cut(s) 455, 559, 1278
DpnI GATC 8 cut(s) 258, 365, 431, 528, 756, 938, 1013, 1167
DpnII GATC 8 cut(s) 256, 363, 429, 526, 754, 936, 1011, 1165
DraI TTTAAA 1 cut(s) 1087
EaeI YGGCCR 1 cut(s) 1134
EagI CGGCCG 1 cut(s) 1134
Eam1104I CTCTTC 3 cut(s) 160, 438, 918
EarI CTCTTC 3 cut(s) 160, 438, 918
EclXI CGGCCG 1 cut(s) 1134
Eco52I CGGCCG 1 cut(s) 1134
Eco72I CACGTG 1 cut(s) 760
Eco91I GGTNACC 1 cut(s) 1312
EcoNI CCTNNNNNAGG 1 cut(s) 707
EcoO65I GGTNACC 1 cut(s) 1312
EcoRI GAATTC 1 cut(s) 494
EcoRII CCWGG 3 cut(s) 94, 640, 1183
EcoT22I ATGCAT 1 cut(s) 508
FaeI CATG 6 cut(s) 362, 480, 932, 978, 1234, 1252
FaqI GGGAC 1 cut(s) 1113
FatI CATG 6 cut(s) 358, 476, 928, 974, 1230, 1248
FbaI TGATCA 1 cut(s) 936
FblI GTMKAC 1 cut(s) 337
Fnu4HI GCNGC 4 cut(s) 395, 450, 728, 737
FokI GGATG 5 cut(s) 199, 623, 882, 946, 1394
Fsp4HI GCNGC 4 cut(s) 395, 450, 728, 737
FspBI CTAG 1 cut(s) 860
GluI GCNGC 4 cut(s) 395, 450, 728, 737
GsuI CTGGAG 1 cut(s) 1425
HaeIII GGCC 5 cut(s) 8, 202, 408, 1136, 1175
HapII CCGG 4 cut(s) 254, 1133, 1364, 1379
Hin1II CATG 6 cut(s) 362, 480, 932, 978, 1234, 1252
HincII GTYRAC 2 cut(s) 795, 1206
HindII GTYRAC 2 cut(s) 795, 1206
HindIII AAGCTT 1 cut(s) 86
HinfI GANTC 3 cut(s) 67, 557, 1254
HpaI GTTAAC 2 cut(s) 795, 1206
HpaII CCGG 4 cut(s) 254, 1133, 1364, 1379
HphI GGTGA 1 cut(s) 1324
Hpy166II GTNNAC 9 cut(s) 55, 338, 634, 665, 700, 795, 1141, 1206, 1370
Hpy188I TCNGA 6 cut(s) 160, 458, 562, 574, 892, 1011
Hpy188III TCNNGA 6 cut(s) 178, 211, 382, 775, 812, 1442
Hpy8I GTNNAC 9 cut(s) 55, 338, 634, 665, 700, 795, 1141, 1206, 1370
HpyAV CCTTC 4 cut(s) 181, 328, 634, 1186
HpyCH4III ACNGT 3 cut(s) 135, 1027, 1083
HpyCH4IV ACGT 3 cut(s) 345, 368, 759
HpyF10VI GCNNNNNNNGC 4 cut(s) 414, 733, 736, 1112
HpyF3I CTNAG 3 cut(s) 455, 559, 1278
HpySE526I ACGT 3 cut(s) 345, 368, 759
Hsp92II CATG 6 cut(s) 362, 480, 932, 978, 1234, 1252
Ksp22I TGATCA 1 cut(s) 936
KspAI GTTAAC 2 cut(s) 795, 1206
Kzo9I GATC 8 cut(s) 256, 363, 429, 526, 754, 936, 1011, 1165
LguI GCTCTTC 1 cut(s) 918
LmnI GCTCC 1 cut(s) 20
Lsp1109I GCAGC 3 cut(s) 381, 461, 748
LweI GCATC 5 cut(s) 406, 493, 515, 952, 1226
MabI ACCWGGT 1 cut(s) 94
MaeI CTAG 1 cut(s) 860
MaeII ACGT 3 cut(s) 345, 368, 759
MaeIII GTNAC 3 cut(s) 350, 1312, 1421
MalI GATC 8 cut(s) 258, 365, 431, 528, 756, 938, 1013, 1167
MboI GATC 8 cut(s) 256, 363, 429, 526, 754, 936, 1011, 1165
MflI RGATCY 1 cut(s) 256
MhlI GDGCHC 1 cut(s) 572
MlyI GAGTC 1 cut(s) 551
MmeI TCCRAC 2 cut(s) 301, 1243
Mph1103I ATGCAT 1 cut(s) 508
MroXI GAANNNNTTC 1 cut(s) 807
MseI TTAA 7 cut(s) 420, 794, 818, 917, 1086, 1145, 1205
MspI CCGG 4 cut(s) 254, 1133, 1364, 1379
MspR9I CCNGG 7 cut(s) 96, 254, 642, 1133, 1185, 1365, 1379
Mva1269I GAATGC 1 cut(s) 602
MvaI CCWGG 3 cut(s) 96, 642, 1185
MvnI CGCG 1 cut(s) 730
MwoI GCNNNNNNNGC 4 cut(s) 414, 733, 736, 1112
NciI CCSGG 4 cut(s) 254, 1133, 1365, 1379
NdeII GATC 8 cut(s) 256, 363, 429, 526, 754, 936, 1011, 1165
NlaIII CATG 6 cut(s) 362, 480, 932, 978, 1234, 1252
NmuCI GTSAC 1 cut(s) 1312
NsiI ATGCAT 1 cut(s) 508
NspV TTCGAA 1 cut(s) 1396
PciSI GCTCTTC 1 cut(s) 918
PctI GAATGC 1 cut(s) 602
PdmI GAANNNNTTC 1 cut(s) 807
PfeI GAWTC 2 cut(s) 67, 1254
PflMI CCANNNNNTGG 1 cut(s) 119
PfoI TCCNGGA 1 cut(s) 1377
PkrI GCNGC 4 cut(s) 396, 451, 729, 738
PleI GAGTC 1 cut(s) 551
PmaCI CACGTG 1 cut(s) 760
PmlI CACGTG 1 cut(s) 760
PpsI GAGTC 1 cut(s) 551
Ppu21I YACGTR 2 cut(s) 369, 760
PshAI GACNNNNGTC 1 cut(s) 472
PsiI TTATAA 1 cut(s) 35
Psp6I CCWGG 3 cut(s) 94, 640, 1183
PspCI CACGTG 1 cut(s) 760
PspEI GGTNACC 1 cut(s) 1312
PspGI CCWGG 3 cut(s) 94, 640, 1183
PspPI GGNCC 3 cut(s) 6, 200, 407
PstI CTGCAG 1 cut(s) 904
PsuI RGATCY 1 cut(s) 256
RsaI GTAC 6 cut(s) 371, 377, 828, 1140, 1322, 1360
RsaNI GTAC 6 cut(s) 370, 376, 827, 1139, 1321, 1359
SapI GCTCTTC 1 cut(s) 918
SaqAI TTAA 7 cut(s) 420, 794, 818, 917, 1086, 1145, 1205
SatI GCNGC 4 cut(s) 395, 450, 728, 737
Sau3AI GATC 8 cut(s) 256, 363, 429, 526, 754, 936, 1011, 1165
Sau96I GGNCC 3 cut(s) 6, 200, 407
SchI GAGTC 1 cut(s) 551
ScrFI CCNGG 7 cut(s) 96, 254, 642, 1133, 1185, 1365, 1379
SduI GDGCHC 1 cut(s) 572
SexAI ACCWGGT 1 cut(s) 94
SfaNI GCATC 5 cut(s) 406, 493, 515, 952, 1226
SfcI CTRYAG 3 cut(s) 707, 741, 900
SfuI TTCGAA 1 cut(s) 1396
SmlI CTYRAG 2 cut(s) 380, 773
SmoI CTYRAG 2 cut(s) 380, 773
SsiI CCGC 3 cut(s) 534, 728, 1242
SspMI CTAG 1 cut(s) 860
StyD4I CCNGG 7 cut(s) 94, 252, 640, 1131, 1183, 1363, 1377
TaaI ACNGT 3 cut(s) 135, 1027, 1083
TaiI ACGT 3 cut(s) 348, 371, 762
TaqI TCGA 2 cut(s) 753, 1396
TatI WGTACW 2 cut(s) 826, 1320
TauI GCSGC 1 cut(s) 730
TfiI GAWTC 2 cut(s) 67, 1254
Tru1I TTAA 7 cut(s) 420, 794, 818, 917, 1086, 1145, 1205
Tru9I TTAA 7 cut(s) 420, 794, 818, 917, 1086, 1145, 1205
TscAI CASTG 2 cut(s) 909, 1341
TseFI GTSAC 1 cut(s) 1312
TseI GCWGC 3 cut(s) 394, 449, 736
Tsp45I GTSAC 1 cut(s) 1312
TspDTI ATGAA 4 cut(s) 163, 287, 595, 1219
TspGWI ACGGA 3 cut(s) 338, 935, 1346
TspRI CASTG 2 cut(s) 909, 1341
Van91I CCANNNNNTGG 1 cut(s) 119
XagI CCTNNNNNAGG 1 cut(s) 707
XapI RAATTY 4 cut(s) 494, 580, 804, 1225
XmiI GTMKAC 1 cut(s) 337
XmnI GAANNNNTTC 1 cut(s) 807
XspI CTAG 1 cut(s) 860
Zsp2I ATGCAT 1 cut(s) 508
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.