Rh7BG179200

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Reverse (-)
14181017 .. 14186624
5608 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG179200.1

Sequence Viewer

Length: 1446 bp
ATGTTGGGTTTGTGCATTGTAGCATTAGTTGCTGTAGGCATTACACACTGGGTGTATAGGTGGAGAAATCCCAGATGCAATGGCAAACTTCCACCAGGTTCAATGGGTTTGCCACTGATAGGCGAGACCATACAGTTCCTCACTTCAAGCACCTCCTTCGATATTCCTCCCTTCATTAAGACAAGGATGGAAAGGTATGGACCAATATTCAAGAGCCAATTGATGGGAGCACCTTTCATAGTATCGACAGATCCCGAACTGAATATGTATGTCTTCCAACAAGACGATAAATTGTTTGAAAGCGGGTATCCAGATTCTGTCAAAAAGATTTTTGGTGAAAAACAGTTGGGAAACATTCATGTGTCGGTTTACAAATACCTCAAGAGCATGATGCTTAACCTCATTGGCCCTGAAAGCCTCAAAAATATGCTCCCTGAAATCGAGCAATCGACTCGCACAAGATTAGAGCAATGGTCGTGTCAAGACACTACAGAATTGAAAGAAGCAACTTCAGAAATGGTATTTGCACTCACTGCAAAGATACTCATAAGTTATGATTCAAGTGAGTCCTCAGACAACTTAAGGACAAGCTTCGATGCATTCGCTCGGGGAATGTTCTCCCTCCCATTGCCGATCCCCGGAACAGCTTTTCACAAATGTTTACAGGGTAGGAAAAGGGTAATGAGAACACTAAAATACATGCTACAGGAAAGGCGTGCAATGTCCCGAGAGCAACCTATCGATTTTTTTGATCACGTGCTTGAAGAACTTAAGAAAGAAGGAACAGTCTTAACGGAGGAAATTTCTTTTGACTTAATGTTTTTGCTACTCTTTGCGAGCTTTGATACAACTTCCACAGCTATGACCCTACTCGTCAAGTTTGTTTCAGACCATCCTCTGGTGCTAAAGCAATTGCTGCAAGAACATGAGATGATTGTAAAGCAAAGGGAGAATGCTAATTCAGGGCTTACATGGGAAGAATACAAGTCCATGACATTCACATTGCAGGTCATCAATGAAACGGTTAGACTGACAAATCATGTTCCAGGAATGTTTCGCAAGGCAATAAAAGAAGTACAATTCAAAGGATATACAATTCCAGAAGGCTGGTCAGTTATGGTTTGTCCCCAAGTCCAACACTTGAACCCAGAAAAATATGAAGATCCTATGGCCTTCAATCCATGGAGATGGGAGGGAAAGGAGAGTGGTGCATCGAAAGATTTCATGGCTTTTGGTGGTGGCTTGAGATCCTGCGTAGGAGCAGCGTTTGGCAAGGTGCAGATGGCTGTATTTCTTCATTGCTTCGTTACAAAGTACAGGTGGGAGGTAATCAAAGGAGGAAATATATTCCGAAATCCTTGGATACAATTTCCAGGGGGTTTTCACATTCGGGTACTGAAGAAAGACACAAGTAACAGTAGACAGCATATAAGTCCAGATACTTGA

Protein Analysis

481

Amino Acids

55.09

Weight (kDa)

8.65

Isoelectric Point (pI)

43.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 31 - 448 5.1e-58 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 997
AccB7I CCANNNNNTGG 2 cut(s) 223, 898
AccI GTMKAC 1 cut(s) 1420
AciI CCGC 1 cut(s) 303
AclWI GGATC 4 cut(s) 245, 628, 1157, 1242
AcsI RAATTY 1 cut(s) 801
AcuI CTGAAG 2 cut(s) 495, 1418
AcvI CACGTG 1 cut(s) 757
AdeI CACNNNGTG 1 cut(s) 52
AfaI GTAC 3 cut(s) 1077, 1316, 1395
AfiI CCNNNNNNNGG 4 cut(s) 119, 223, 638, 898
AflII CTTAAG 2 cut(s) 580, 770
AjnI CCWGG 3 cut(s) 94, 1045, 1372
AluBI AGCT 4 cut(s) 591, 647, 840, 860
AluI AGCT 4 cut(s) 591, 647, 840, 860
Alw21I GWGCWC 1 cut(s) 232
Alw26I GTCTC 1 cut(s) 119
AlwI GGATC 4 cut(s) 245, 628, 1157, 1242
AlwNI CAGNNNCTG 1 cut(s) 317
Ama87I CYCGRG 2 cut(s) 606, 726
AoxI GGCC 2 cut(s) 406, 1170
ApeKI GCWGC 2 cut(s) 916, 1262
ApoI RAATTY 1 cut(s) 801
Asp700I GAANNNNTTC 1 cut(s) 1220
AspS9I GGNCC 2 cut(s) 200, 407
AsuC2I CCSGG 1 cut(s) 639
AsuHPI GGTGA 1 cut(s) 347
AvaI CYCGRG 2 cut(s) 606, 726
AvaII GGWCC 1 cut(s) 200
BbrPI CACGTG 1 cut(s) 757
BbsI GAAGAC 1 cut(s) 265
Bbv12I GWGCWC 1 cut(s) 232
BbvI GCAGC 2 cut(s) 903, 1274
BccI CCATC 5 cut(s) 181, 217, 900, 1182, 1276
BcgI CGANNNNNNTGC 4 cut(s) 139, 173, 434, 468
BciT130I CCWGG 3 cut(s) 96, 1047, 1374
BciVI GTATCC 2 cut(s) 318, 1356
BclI TGATCA 1 cut(s) 751
BcnI CCSGG 1 cut(s) 639
BcoDI GTCTC 1 cut(s) 119
BfmI CTRYAG 3 cut(s) 33, 489, 704
BfrI CTTAAG 2 cut(s) 580, 770
BfuAI ACCTGC 1 cut(s) 997
BfuI GTATCC 2 cut(s) 318, 1356
BisI GCNGC 2 cut(s) 917, 1263
BlsI GCNGC 2 cut(s) 918, 1264
Bme1390I CCNGG 4 cut(s) 96, 639, 1047, 1374
Bme18I GGWCC 1 cut(s) 200
BmeT110I CYCGRG 2 cut(s) 606, 726
BmgT120I GGNCC 2 cut(s) 200, 407
BmrFI CCNGG 4 cut(s) 96, 639, 1047, 1374
BmrI ACTGGG 1 cut(s) 58
BmsI GCATC 4 cut(s) 65, 381, 586, 1220
BmuI ACTGGG 1 cut(s) 58
BpiI GAAGAC 1 cut(s) 265
BpuEI CTTGAG 2 cut(s) 365, 1264
BpuMI CCSGG 1 cut(s) 639
Bsa29I ATCGAT 1 cut(s) 741
BsaAI YACGTR 1 cut(s) 757
BsaI GGTCTC 1 cut(s) 119
BsaJI CCNNGG 4 cut(s) 637, 1181, 1358, 1373
Bsc4I CCNNNNNNNGG 4 cut(s) 119, 223, 638, 898
Bse1I ACTGG 1 cut(s) 53
Bse3DI GCAATG 6 cut(s) 85, 476, 626, 726, 1001, 1297
BseBI CCWGG 3 cut(s) 96, 1047, 1374
BseCI ATCGAT 1 cut(s) 741
BseDI CCNNGG 4 cut(s) 637, 1181, 1358, 1373
BseGI GGATG 2 cut(s) 192, 892
BseLI CCNNNNNNNGG 4 cut(s) 119, 223, 638, 898
BseMI GCAATG 6 cut(s) 85, 476, 626, 726, 1001, 1297
BseMII CTCAG 1 cut(s) 585
BseNI ACTGG 1 cut(s) 53
BseXI GCAGC 2 cut(s) 903, 1274
BsgI GTGCAG 1 cut(s) 1298
BshFI GGCC 2 cut(s) 408, 1172
BshVI ATCGAT 1 cut(s) 741
BsiHKAI GWGCWC 1 cut(s) 232
BsiHKCI CYCGRG 2 cut(s) 606, 726
BsiSI CCGG 1 cut(s) 639
BslFI GGGAC 2 cut(s) 709, 1110
BslI CCNNNNNNNGG 4 cut(s) 119, 223, 638, 898
BsmAI GTCTC 1 cut(s) 119
BsmFI GGGAC 2 cut(s) 709, 1110
BsmI GAATGC 2 cut(s) 599, 958
BsnI GGCC 2 cut(s) 408, 1172
Bso31I GGTCTC 1 cut(s) 119
BsoBI CYCGRG 2 cut(s) 606, 726
Bsp1286I GDGCHC 1 cut(s) 232
Bsp143I GATC 5 cut(s) 250, 633, 751, 1162, 1247
Bsp19I CCATGG 1 cut(s) 1181
BspACI CCGC 1 cut(s) 303
BspANI GGCC 2 cut(s) 408, 1172
BspCNI CTCAG 1 cut(s) 584
BspDI ATCGAT 1 cut(s) 741
BspMI ACCTGC 1 cut(s) 997
BspPI GGATC 4 cut(s) 245, 628, 1157, 1242
BspTI CTTAAG 2 cut(s) 580, 770
BspTNI GGTCTC 1 cut(s) 119
BsrDI GCAATG 6 cut(s) 85, 476, 626, 726, 1001, 1297
BsrI ACTGG 1 cut(s) 53
BssECI CCNNGG 4 cut(s) 637, 1181, 1358, 1373
BssMI GATC 5 cut(s) 250, 633, 751, 1162, 1247
BssT1I CCWWGG 2 cut(s) 1181, 1358
Bst2UI CCWGG 3 cut(s) 96, 1047, 1374
Bst4CI ACNGT 5 cut(s) 135, 345, 787, 1024, 1418
BstAFI CTTAAG 2 cut(s) 580, 770
BstAPI GCANNNNNTGC 3 cut(s) 29, 533, 916
BstBAI YACGTR 1 cut(s) 757
BstC8I GCNNGC 2 cut(s) 717, 838
BstDEI CTNAG 1 cut(s) 571
BstDSI CCRYGG 1 cut(s) 1181
BstF5I GGATG 2 cut(s) 192, 892
BstKTI GATC 5 cut(s) 253, 636, 754, 1165, 1250
BstMAI GTCTC 1 cut(s) 119
BstMBI GATC 5 cut(s) 250, 633, 751, 1162, 1247
BstMWI GCNNNNNNNGC 4 cut(s) 29, 414, 533, 916
BstNI CCWGG 3 cut(s) 96, 1047, 1374
BstNSI RCATGY 1 cut(s) 703
BstSCI CCNGG 4 cut(s) 94, 637, 1045, 1372
BstSFI CTRYAG 3 cut(s) 33, 489, 704
BstV1I GCAGC 2 cut(s) 903, 1274
BstV2I GAAGAC 1 cut(s) 265
BstX2I RGATCY 3 cut(s) 250, 1162, 1247
BstXI CCANNNNNNTGG 2 cut(s) 1107, 1188
BstYI RGATCY 3 cut(s) 250, 1162, 1247
Bsu15I ATCGAT 1 cut(s) 741
BsuI GTATCC 2 cut(s) 318, 1356
BsuRI GGCC 2 cut(s) 408, 1172
BsuTUI ATCGAT 1 cut(s) 741
BtgI CCRYGG 1 cut(s) 1181
BtsCI GGATG 2 cut(s) 192, 892
BtsI GCAGTG 1 cut(s) 531
BtsIMutI CAGTG 3 cut(s) 46, 113, 531
BveI ACCTGC 1 cut(s) 997
Cac8I GCNNGC 2 cut(s) 717, 838
CaiI CAGNNNCTG 1 cut(s) 317
Cfr13I GGNCC 2 cut(s) 200, 407
ClaI ATCGAT 1 cut(s) 741
CsiI ACCWGGT 1 cut(s) 94
Csp6I GTAC 3 cut(s) 1076, 1315, 1394
CviAII CATG 9 cut(s) 359, 388, 700, 926, 972, 991, 1040, 1182, 1225
CviQI GTAC 3 cut(s) 1076, 1315, 1394
DdeI CTNAG 1 cut(s) 571
DpnI GATC 5 cut(s) 252, 635, 753, 1164, 1249
DpnII GATC 5 cut(s) 250, 633, 751, 1162, 1247
DraIII CACNNNGTG 1 cut(s) 52
Eco130I CCWWGG 2 cut(s) 1181, 1358
Eco31I GGTCTC 1 cut(s) 119
Eco47I GGWCC 1 cut(s) 200
Eco57I CTGAAG 2 cut(s) 495, 1418
Eco72I CACGTG 1 cut(s) 757
Eco88I CYCGRG 2 cut(s) 606, 726
EcoRII CCWGG 3 cut(s) 94, 1045, 1372
EcoT14I CCWWGG 2 cut(s) 1181, 1358
EcoT22I ATGCAT 1 cut(s) 601
ErhI CCWWGG 2 cut(s) 1181, 1358
FaeI CATG 9 cut(s) 362, 391, 703, 929, 975, 994, 1043, 1185, 1228
FaqI GGGAC 2 cut(s) 709, 1110
FatI CATG 9 cut(s) 358, 387, 699, 925, 971, 990, 1039, 1181, 1224
FauI CCCGC 1 cut(s) 296
FbaI TGATCA 1 cut(s) 751
FblI GTMKAC 1 cut(s) 1420
Fnu4HI GCNGC 2 cut(s) 917, 1263
FokI GGATG 2 cut(s) 199, 879
Fsp4HI GCNGC 2 cut(s) 917, 1263
GluI GCNGC 2 cut(s) 917, 1263
HaeIII GGCC 2 cut(s) 408, 1172
HapII CCGG 1 cut(s) 639
Hin1II CATG 9 cut(s) 362, 391, 703, 929, 975, 994, 1043, 1185, 1228
HindIII AAGCTT 1 cut(s) 589
HinfI GANTC 4 cut(s) 314, 451, 557, 566
HpaII CCGG 1 cut(s) 639
HphI GGTGA 1 cut(s) 347
Hpy166II GTNNAC 3 cut(s) 370, 662, 1421
Hpy188I TCNGA 4 cut(s) 514, 574, 889, 1352
Hpy188III TCNNGA 8 cut(s) 211, 254, 311, 382, 482, 726, 1100, 1436
Hpy8I GTNNAC 3 cut(s) 370, 662, 1421
HpyAV CCTTC 5 cut(s) 166, 181, 773, 1097, 1183
HpyCH4III ACNGT 5 cut(s) 135, 345, 787, 1024, 1418
HpyCH4IV ACGT 1 cut(s) 756
HpyF10VI GCNNNNNNNGC 4 cut(s) 29, 414, 533, 916
HpyF3I CTNAG 1 cut(s) 571
HpySE526I ACGT 1 cut(s) 756
Hsp92II CATG 9 cut(s) 362, 391, 703, 929, 975, 994, 1043, 1185, 1228
Ksp22I TGATCA 1 cut(s) 751
Kzo9I GATC 5 cut(s) 250, 633, 751, 1162, 1247
LmnI GCTCC 3 cut(s) 227, 435, 1259
Lsp1109I GCAGC 2 cut(s) 903, 1274
LweI GCATC 4 cut(s) 65, 381, 586, 1220
MabI ACCWGGT 1 cut(s) 94
MaeII ACGT 1 cut(s) 756
MaeIII GTNAC 2 cut(s) 1306, 1412
MalI GATC 5 cut(s) 252, 635, 753, 1164, 1249
MboI GATC 5 cut(s) 250, 633, 751, 1162, 1247
MboII GAAGA 6 cut(s) 265, 776, 989, 1172, 1286, 1411
MfeI CAATTG 2 cut(s) 218, 911
MflI RGATCY 3 cut(s) 250, 1162, 1247
MhlI GDGCHC 1 cut(s) 232
MluCI AATT 9 cut(s) 218, 290, 494, 801, 911, 958, 1079, 1095, 1367
MlyI GAGTC 2 cut(s) 445, 575
MmeI TCCRAC 2 cut(s) 301, 1159
Mph1103I ATGCAT 1 cut(s) 601
MroXI GAANNNNTTC 1 cut(s) 1220
MseI TTAA 6 cut(s) 177, 396, 581, 771, 791, 815
MslI CAYNNNNRTG 3 cut(s) 359, 860, 1186
MspCI CTTAAG 2 cut(s) 580, 770
MspI CCGG 1 cut(s) 639
MspR9I CCNGG 4 cut(s) 96, 639, 1047, 1374
MunI CAATTG 2 cut(s) 218, 911
Mva1269I GAATGC 2 cut(s) 599, 958
MvaI CCWGG 3 cut(s) 96, 1047, 1374
MwoI GCNNNNNNNGC 4 cut(s) 29, 414, 533, 916
NciI CCSGG 1 cut(s) 639
NcoI CCATGG 1 cut(s) 1181
NdeII GATC 5 cut(s) 250, 633, 751, 1162, 1247
NlaIII CATG 9 cut(s) 362, 391, 703, 929, 975, 994, 1043, 1185, 1228
NsiI ATGCAT 1 cut(s) 601
NspI RCATGY 1 cut(s) 703
PctI GAATGC 2 cut(s) 599, 958
PdmI GAANNNNTTC 1 cut(s) 1220
PfeI GAWTC 2 cut(s) 314, 557
PflMI CCANNNNNTGG 2 cut(s) 223, 898
PfoI TCCNGGA 1 cut(s) 1045
PkrI GCNGC 2 cut(s) 918, 1264
PleI GAGTC 2 cut(s) 445, 574
PmaCI CACGTG 1 cut(s) 757
PmlI CACGTG 1 cut(s) 757
PpsI GAGTC 2 cut(s) 445, 574
Ppu21I YACGTR 1 cut(s) 757
Psp6I CCWGG 3 cut(s) 94, 1045, 1372
PspCI CACGTG 1 cut(s) 757
PspGI CCWGG 3 cut(s) 94, 1045, 1372
PspPI GGNCC 2 cut(s) 200, 407
PstNI CAGNNNCTG 1 cut(s) 317
PsuI RGATCY 3 cut(s) 250, 1162, 1247
RsaI GTAC 3 cut(s) 1077, 1316, 1395
RsaNI GTAC 3 cut(s) 1076, 1315, 1394
RseI CAYNNNNRTG 3 cut(s) 359, 860, 1186
SaqAI TTAA 6 cut(s) 177, 396, 581, 771, 791, 815
SatI GCNGC 2 cut(s) 917, 1263
Sau3AI GATC 5 cut(s) 250, 633, 751, 1162, 1247
Sau96I GGNCC 2 cut(s) 200, 407
SchI GAGTC 2 cut(s) 445, 575
ScrFI CCNGG 4 cut(s) 96, 639, 1047, 1374
SduI GDGCHC 1 cut(s) 232
SexAI ACCWGGT 1 cut(s) 94
SfaNI GCATC 4 cut(s) 65, 381, 586, 1220
SfcI CTRYAG 3 cut(s) 33, 489, 704
SinI GGWCC 1 cut(s) 200
SmiMI CAYNNNNRTG 3 cut(s) 359, 860, 1186
SmlI CTYRAG 4 cut(s) 380, 580, 770, 1243
SmoI CTYRAG 4 cut(s) 380, 580, 770, 1243
Sse9I AATT 9 cut(s) 218, 290, 494, 801, 911, 958, 1079, 1095, 1367
SsiI CCGC 1 cut(s) 303
SspI AATATT 1 cut(s) 207
StyD4I CCNGG 4 cut(s) 94, 637, 1045, 1372
StyI CCWWGG 2 cut(s) 1181, 1358
TaaI ACNGT 5 cut(s) 135, 345, 787, 1024, 1418
TaiI ACGT 1 cut(s) 759
TaqI TCGA 7 cut(s) 159, 245, 441, 449, 594, 741, 1214
TasI AATT 9 cut(s) 218, 290, 494, 801, 911, 958, 1079, 1095, 1367
TatI WGTACW 2 cut(s) 1075, 1314
TfiI GAWTC 2 cut(s) 314, 557
Tru1I TTAA 6 cut(s) 177, 396, 581, 771, 791, 815
Tru9I TTAA 6 cut(s) 177, 396, 581, 771, 791, 815
TscAI CASTG 3 cut(s) 53, 120, 538
TseI GCWGC 2 cut(s) 916, 1262
TspDTI ATGAA 7 cut(s) 163, 226, 347, 1032, 1173, 1213, 1286
TspGWI ACGGA 1 cut(s) 809
TspRI CASTG 3 cut(s) 53, 120, 538
Van91I CCANNNNNTGG 2 cut(s) 223, 898
Vha464I CTTAAG 2 cut(s) 580, 770
VpaK11BI GGWCC 1 cut(s) 200
XapI RAATTY 1 cut(s) 801
XceI RCATGY 1 cut(s) 703
XmiI GTMKAC 1 cut(s) 1420
XmnI GAANNNNTTC 1 cut(s) 1220
Zsp2I ATGCAT 1 cut(s) 601
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.