Rh7AG175900

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
15425463 .. 15429372
3910 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG175900.1

Sequence Viewer

Length: 1443 bp
ATGTTGGGTTTGTGCATTGTAGCATTAGTTGCTGTAGGCATTACACACTGGGTGTATAGGTGGAGAAATCCCAGATGCAATGGCAAACTTCCACCTGGTTCAATGGGTTTGCCGCTGATAGGCGAGACCATACAGTACCTTGCTTCCAACTCCTCCTTTGATATTCCCCCTTTCATCAAGACCAGAAGGGAAAGGTATGGGCCAATATTCAAGAGTCAACTGATGGGAGCACCATTTATAGTATCGACAGACCCGGAACTCAATATGTATGTCTTCCAACAAGACGATAAATTGTTTCAAAGCGGGTATCCAGATTCTGTCCAAAAGATTTTCGGCAAACAACAGATGGGAAACATGCATGTGTTGGTTTACAAATACCTCAAGAGGATGATGCTTACCCTCATTGGCCCCGAAAGCCTTAAAAGGACGCTCCCTGAAATTGAACAAGCAATACACACAAGTATGCAACAATGGACATGTCAAGACACTACAGAAGTTAAAGGAGCAGCTGCAGACATGATATTCTCTCTCACTGCAAAGAAACTCATGAGTTATGATTCAAGTAACTCCTCAGACAACCTAAGGGCAAACTTCAATGCGTTCGCTGATGGACTGATCTCCTTCCCTTTGGCAATCCCTGGAACAGCTTTTCACAAATGTTTACAGGGTAGGGACAGGATACTGAGCAGGTTAAAAGAGATGCTACAGGAAAGACAAGCAACATCTCGAAAGCAACCTATTGATTTTTTTGATTACATCCTTGAAGAACTTGAGAAAGAAGTAACAGTCATAACAGAGGAAATTTGTTTTGATTTGATGTTTGCGCTACTCTTTACAAGTTTTGATACAACTTCCACAGCAATGACTCTGCTCCTCAAGTTTGTTTCAGGCCATCCCCTGGTGCTAAAGCAATTAACGGAAGAACATGAGAGGATTATAAAGCAAAGGGAAAATGCTAATTCAGGACTTACATGGGAAGAATACAAATCAATGAAATTTACAATGCAGGTCATCAATGAAACGGTTAGACTGGCAAATCAAGTGCCAGGCATCTTTCGCAAGGCAATAAAAGAAGTAGAGTTCAAGGGATATACAATCCCAGAAGGTTGGTCAGTTCTGGTTTGTTTCCAAGCCCAACACTTAAACCCAGAAAAATATGAAGATCCTCTGGCCTTCAACCCATGGAGATGGGAGGGTAAAGAGAGTGGTGCATCCAAAGATTTTATGGCTTTTGGTGGTGGCTTGAGATCCTGTGTAGGAGCAGAATTTGGTAAGCTGCAGATGGCTGTTTTTGTCCATTGCTTAGTCACAAAATACAGGTGGGAAATGATTGGAGGAAATATAGTCCGAAATCCTGGTATACAATTTCCAGGTGGTTTTCACATCCGGATACACCAGAAAGATACAAGGAGCAGCAAACAGCATATAACTCCAGATACTTAA

Protein Analysis

480

Amino Acids

54.74

Weight (kDa)

8.61

Isoelectric Point (pI)

41.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 31 - 447 8.5e-58 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 938
Acc36I ACCTGC 2 cut(s) 678, 997
AccB7I CCANNNNNTGG 1 cut(s) 898
AccI GTMKAC 1 cut(s) 1360
AccIII TCCGGA 1 cut(s) 1386
AciI CCGC 2 cut(s) 113, 303
AclWI GGATC 2 cut(s) 1157, 1242
AcsI RAATTY 3 cut(s) 801, 995, 1265
AdeI CACNNNGTG 1 cut(s) 52
AfaI GTAC 1 cut(s) 137
AfiI CCNNNNNNNGG 2 cut(s) 119, 898
AflIII ACRYGT 1 cut(s) 476
AgsI TTSAA 9 cut(s) 102, 211, 299, 443, 561, 595, 764, 1084, 1177
AjnI CCWGG 6 cut(s) 94, 637, 897, 1045, 1354, 1369
AluBI AGCT 3 cut(s) 509, 647, 1276
AluI AGCT 3 cut(s) 509, 647, 1276
Alw21I GWGCWC 1 cut(s) 232
Alw26I GTCTC 1 cut(s) 119
AlwI GGATC 2 cut(s) 1157, 1242
AlwNI CAGNNNCTG 1 cut(s) 317
Aor13HI TCCGGA 1 cut(s) 1386
AoxI GGCC 4 cut(s) 200, 406, 889, 1170
ApeKI GCWGC 4 cut(s) 506, 509, 1276, 1413
ApoI RAATTY 3 cut(s) 801, 995, 1265
AspLEI GCGC 1 cut(s) 826
AspS9I GGNCC 2 cut(s) 200, 407
AsuC2I CCSGG 1 cut(s) 254
AxyI CCTNAGG 1 cut(s) 581
BbsI GAAGAC 1 cut(s) 265
Bbv12I GWGCWC 1 cut(s) 232
BbvI GCAGC 4 cut(s) 496, 518, 1263, 1425
BccI CCATC 6 cut(s) 217, 340, 602, 900, 1182, 1276
BciT130I CCWGG 6 cut(s) 96, 639, 899, 1047, 1356, 1371
BciVI GTATCC 3 cut(s) 318, 672, 1383
BcnI CCSGG 1 cut(s) 254
BcoDI GTCTC 1 cut(s) 119
BfmI CTRYAG 5 cut(s) 33, 489, 510, 704, 1277
BfuAI ACCTGC 2 cut(s) 678, 997
BfuI GTATCC 3 cut(s) 318, 672, 1383
BisI GCNGC 5 cut(s) 113, 507, 510, 1277, 1414
BlsI GCNGC 5 cut(s) 114, 508, 511, 1278, 1415
Bme1390I CCNGG 7 cut(s) 96, 254, 639, 899, 1047, 1356, 1371
BmgT120I GGNCC 2 cut(s) 200, 407
BmiI GGNNCC 1 cut(s) 409
BmrFI CCNGG 7 cut(s) 96, 254, 639, 899, 1047, 1356, 1371
BmrI ACTGGG 1 cut(s) 58
BmsI GCATC 5 cut(s) 65, 381, 690, 1059, 1220
BmuI ACTGGG 1 cut(s) 58
BpiI GAAGAC 1 cut(s) 265
BpmI CTGGAG 1 cut(s) 1416
BpuEI CTTGAG 4 cut(s) 365, 791, 860, 1264
BpuMI CCSGG 1 cut(s) 254
BsaI GGTCTC 1 cut(s) 119
BsaJI CCNNGG 3 cut(s) 637, 897, 1181
BsaWI WCCGGW 1 cut(s) 1386
Bsc4I CCNNNNNNNGG 2 cut(s) 119, 898
Bse1I ACTGG 2 cut(s) 53, 1035
Bse21I CCTNAGG 1 cut(s) 581
Bse3DI GCAATG 3 cut(s) 85, 867, 1297
BseAI TCCGGA 1 cut(s) 1386
BseBI CCWGG 6 cut(s) 96, 639, 899, 1047, 1356, 1371
BseDI CCNNGG 3 cut(s) 637, 897, 1181
BseGI GGATG 5 cut(s) 393, 756, 892, 1211, 1383
BseLI CCNNNNNNNGG 2 cut(s) 119, 898
BseMI GCAATG 3 cut(s) 85, 867, 1297
BseMII CTCAG 2 cut(s) 585, 674
BseNI ACTGG 2 cut(s) 53, 1035
BseRI GAGGAG 3 cut(s) 142, 559, 863
BseXI GCAGC 4 cut(s) 496, 518, 1263, 1425
BshFI GGCC 4 cut(s) 202, 408, 891, 1172
BsiHKAI GWGCWC 1 cut(s) 232
BsiSI CCGG 2 cut(s) 254, 1387
BslFI GGGAC 1 cut(s) 686
BslI CCNNNNNNNGG 2 cut(s) 119, 898
BsmAI GTCTC 1 cut(s) 119
BsmFI GGGAC 1 cut(s) 686
BsnI GGCC 4 cut(s) 202, 408, 891, 1172
Bso31I GGTCTC 1 cut(s) 119
Bsp1286I GDGCHC 1 cut(s) 232
Bsp13I TCCGGA 1 cut(s) 1386
Bsp143I GATC 3 cut(s) 615, 1162, 1247
Bsp19I CCATGG 1 cut(s) 1181
BspACI CCGC 2 cut(s) 113, 303
BspANI GGCC 4 cut(s) 202, 408, 891, 1172
BspCNI CTCAG 2 cut(s) 584, 675
BspEI TCCGGA 1 cut(s) 1386
BspHI TCATGA 1 cut(s) 546
BspLI GGNNCC 1 cut(s) 409
BspMAI CTGCAG 2 cut(s) 514, 1281
BspMI ACCTGC 2 cut(s) 678, 997
BspPI GGATC 2 cut(s) 1157, 1242
BspTNI GGTCTC 1 cut(s) 119
BsrDI GCAATG 3 cut(s) 85, 867, 1297
BsrI ACTGG 2 cut(s) 53, 1035
BssECI CCNNGG 3 cut(s) 637, 897, 1181
BssMI GATC 3 cut(s) 615, 1162, 1247
BssNAI GTATAC 1 cut(s) 1361
BssT1I CCWWGG 1 cut(s) 1181
Bst1107I GTATAC 1 cut(s) 1361
Bst2UI CCWGG 6 cut(s) 96, 639, 899, 1047, 1356, 1371
Bst4CI ACNGT 3 cut(s) 135, 787, 1024
BstAPI GCANNNNNTGC 1 cut(s) 29
BstDEI CTNAG 4 cut(s) 571, 581, 683, 1303
BstDSI CCRYGG 1 cut(s) 1181
BstF5I GGATG 5 cut(s) 393, 756, 892, 1211, 1383
BstHHI GCGC 1 cut(s) 826
BstKTI GATC 3 cut(s) 618, 1165, 1250
BstMAI GTCTC 1 cut(s) 119
BstMBI GATC 3 cut(s) 615, 1162, 1247
BstMWI GCNNNNNNNGC 3 cut(s) 29, 414, 1056
BstNI CCWGG 6 cut(s) 96, 639, 899, 1047, 1356, 1371
BstNSI RCATGY 3 cut(s) 358, 362, 480
BstSCI CCNGG 7 cut(s) 94, 252, 637, 897, 1045, 1354, 1369
BstSFI CTRYAG 5 cut(s) 33, 489, 510, 704, 1277
BstV1I GCAGC 4 cut(s) 496, 518, 1263, 1425
BstV2I GAAGAC 1 cut(s) 265
BstX2I RGATCY 2 cut(s) 1162, 1247
BstXI CCANNNNNNTGG 2 cut(s) 1107, 1188
BstYI RGATCY 2 cut(s) 1162, 1247
BstZ17I GTATAC 1 cut(s) 1361
Bsu36I CCTNAGG 1 cut(s) 581
BsuI GTATCC 3 cut(s) 318, 672, 1383
BsuRI GGCC 4 cut(s) 202, 408, 891, 1172
BtgI CCRYGG 1 cut(s) 1181
BtsCI GGATG 5 cut(s) 393, 756, 892, 1211, 1383
BtsI GCAGTG 1 cut(s) 531
BtsIMutI CAGTG 2 cut(s) 46, 531
BveI ACCTGC 2 cut(s) 678, 997
CaiI CAGNNNCTG 1 cut(s) 317
CciI TCATGA 1 cut(s) 546
CfoI GCGC 1 cut(s) 826
Cfr13I GGNCC 2 cut(s) 200, 407
CseI GACGC 1 cut(s) 436
CsiI ACCWGGT 1 cut(s) 94
Csp6I GTAC 1 cut(s) 136
CviAII CATG 8 cut(s) 355, 359, 477, 517, 547, 926, 972, 1182
CviQI GTAC 1 cut(s) 136
DdeI CTNAG 4 cut(s) 571, 581, 683, 1303
DpnI GATC 3 cut(s) 617, 1164, 1249
DpnII GATC 3 cut(s) 615, 1162, 1247
DraIII CACNNNGTG 1 cut(s) 52
Eco130I CCWWGG 1 cut(s) 1181
Eco31I GGTCTC 1 cut(s) 119
Eco81I CCTNAGG 1 cut(s) 581
EcoRII CCWGG 6 cut(s) 94, 637, 897, 1045, 1354, 1369
EcoT14I CCWWGG 1 cut(s) 1181
EcoT22I ATGCAT 1 cut(s) 360
ErhI CCWWGG 1 cut(s) 1181
FaeI CATG 8 cut(s) 358, 362, 480, 520, 550, 929, 975, 1185
FaqI GGGAC 1 cut(s) 686
FatI CATG 8 cut(s) 354, 358, 476, 516, 546, 925, 971, 1181
FauI CCCGC 1 cut(s) 296
FblI GTMKAC 1 cut(s) 1360
Fnu4HI GCNGC 5 cut(s) 113, 507, 510, 1277, 1414
FokI GGATG 5 cut(s) 400, 743, 879, 1198, 1370
Fsp4HI GCNGC 5 cut(s) 113, 507, 510, 1277, 1414
GlaI GCGC 1 cut(s) 825
GluI GCNGC 5 cut(s) 113, 507, 510, 1277, 1414
GsuI CTGGAG 1 cut(s) 1416
HaeIII GGCC 4 cut(s) 202, 408, 891, 1172
HapII CCGG 2 cut(s) 254, 1387
HgaI GACGC 1 cut(s) 436
HhaI GCGC 1 cut(s) 826
Hin1II CATG 8 cut(s) 358, 362, 480, 520, 550, 929, 975, 1185
Hin6I GCGC 1 cut(s) 824
HinP1I GCGC 1 cut(s) 824
HincII GTYRAC 1 cut(s) 218
HindII GTYRAC 1 cut(s) 218
HinfI GANTC 4 cut(s) 214, 314, 557, 865
HpaII CCGG 2 cut(s) 254, 1387
Hpy166II GTNNAC 4 cut(s) 218, 370, 662, 1361
Hpy188I TCNGA 2 cut(s) 574, 1349
Hpy8I GTNNAC 4 cut(s) 218, 370, 662, 1361
HpyAV CCTTC 4 cut(s) 180, 631, 1097, 1183
HpyCH4III ACNGT 3 cut(s) 135, 787, 1024
HpyCH4V TGCA 9 cut(s) 15, 78, 358, 466, 512, 536, 1006, 1211, 1279
HpyF10VI GCNNNNNNNGC 3 cut(s) 29, 414, 1056
HpyF3I CTNAG 4 cut(s) 571, 581, 683, 1303
Hsp92II CATG 8 cut(s) 358, 362, 480, 520, 550, 929, 975, 1185
HspAI GCGC 1 cut(s) 824
Kpn2I TCCGGA 1 cut(s) 1386
Kzo9I GATC 3 cut(s) 615, 1162, 1247
LmnI GCTCC 6 cut(s) 227, 435, 503, 876, 1259, 1410
Lsp1109I GCAGC 4 cut(s) 496, 518, 1263, 1425
LweI GCATC 5 cut(s) 65, 381, 690, 1059, 1220
MabI ACCWGGT 1 cut(s) 94
MaeIII GTNAC 3 cut(s) 563, 781, 1306
MalI GATC 3 cut(s) 617, 1164, 1249
MboI GATC 3 cut(s) 615, 1162, 1247
MboII GAAGA 5 cut(s) 265, 776, 932, 989, 1172
MflI RGATCY 2 cut(s) 1162, 1247
MhlI GDGCHC 1 cut(s) 232
MluCI AATT 8 cut(s) 290, 438, 801, 911, 958, 995, 1265, 1364
MlyI GAGTC 2 cut(s) 223, 859
MmeI TCCRAC 2 cut(s) 171, 301
Mph1103I ATGCAT 1 cut(s) 360
MroI TCCGGA 1 cut(s) 1386
MseI TTAA 6 cut(s) 420, 498, 692, 914, 1142, 1441
MslI CAYNNNNRTG 4 cut(s) 359, 461, 860, 1186
MspA1I CMGCKG 2 cut(s) 115, 509
MspI CCGG 2 cut(s) 254, 1387
MspR9I CCNGG 7 cut(s) 96, 254, 639, 899, 1047, 1356, 1371
MvaI CCWGG 6 cut(s) 96, 639, 899, 1047, 1356, 1371
MwoI GCNNNNNNNGC 3 cut(s) 29, 414, 1056
NciI CCSGG 1 cut(s) 254
NcoI CCATGG 1 cut(s) 1181
NdeII GATC 3 cut(s) 615, 1162, 1247
NlaIII CATG 8 cut(s) 358, 362, 480, 520, 550, 929, 975, 1185
NlaIV GGNNCC 1 cut(s) 409
NmuCI GTSAC 1 cut(s) 1306
NsiI ATGCAT 1 cut(s) 360
NspI RCATGY 3 cut(s) 358, 362, 480
PagI TCATGA 1 cut(s) 546
PciI ACATGT 1 cut(s) 476
PfeI GAWTC 2 cut(s) 314, 557
PflMI CCANNNNNTGG 1 cut(s) 898
PkrI GCNGC 5 cut(s) 114, 508, 511, 1278, 1415
PleI GAGTC 2 cut(s) 222, 859
PpsI GAGTC 2 cut(s) 222, 859
PscI ACATGT 1 cut(s) 476
PsiI TTATAA 1 cut(s) 938
Psp6I CCWGG 6 cut(s) 94, 637, 897, 1045, 1354, 1369
PspGI CCWGG 6 cut(s) 94, 637, 897, 1045, 1354, 1369
PspN4I GGNNCC 1 cut(s) 409
PspPI GGNCC 2 cut(s) 200, 407
PsrI GAACNNNNNNTAC 2 cut(s) 435, 467
PstI CTGCAG 2 cut(s) 514, 1281
PstNI CAGNNNCTG 1 cut(s) 317
PsuI RGATCY 2 cut(s) 1162, 1247
PvuII CAGCTG 1 cut(s) 509
RsaI GTAC 1 cut(s) 137
RsaNI GTAC 1 cut(s) 136
RseI CAYNNNNRTG 4 cut(s) 359, 461, 860, 1186
SaqAI TTAA 6 cut(s) 420, 498, 692, 914, 1142, 1441
SatI GCNGC 5 cut(s) 113, 507, 510, 1277, 1414
Sau3AI GATC 3 cut(s) 615, 1162, 1247
Sau96I GGNCC 2 cut(s) 200, 407
SchI GAGTC 2 cut(s) 223, 859
ScrFI CCNGG 7 cut(s) 96, 254, 639, 899, 1047, 1356, 1371
SduI GDGCHC 1 cut(s) 232
SexAI ACCWGGT 1 cut(s) 94
SfaNI GCATC 5 cut(s) 65, 381, 690, 1059, 1220
SfcI CTRYAG 5 cut(s) 33, 489, 510, 704, 1277
SmiMI CAYNNNNRTG 4 cut(s) 359, 461, 860, 1186
SmlI CTYRAG 4 cut(s) 380, 770, 875, 1243
SmoI CTYRAG 4 cut(s) 380, 770, 875, 1243
Sse9I AATT 8 cut(s) 290, 438, 801, 911, 958, 995, 1265, 1364
SsiI CCGC 2 cut(s) 113, 303
SspI AATATT 1 cut(s) 207
StyD4I CCNGG 7 cut(s) 94, 252, 637, 897, 1045, 1354, 1369
StyI CCWWGG 1 cut(s) 1181
TaaI ACNGT 3 cut(s) 135, 787, 1024
TaqI TCGA 2 cut(s) 245, 727
TasI AATT 8 cut(s) 290, 438, 801, 911, 958, 995, 1265, 1364
TauI GCSGC 1 cut(s) 115
TfiI GAWTC 2 cut(s) 314, 557
Tru1I TTAA 6 cut(s) 420, 498, 692, 914, 1142, 1441
Tru9I TTAA 6 cut(s) 420, 498, 692, 914, 1142, 1441
TscAI CASTG 2 cut(s) 53, 538
TseFI GTSAC 1 cut(s) 1306
TseI GCWGC 4 cut(s) 506, 509, 1276, 1413
Tsp45I GTSAC 1 cut(s) 1306
TspDTI ATGAA 4 cut(s) 163, 1007, 1032, 1173
TspGWI ACGGA 1 cut(s) 932
TspRI CASTG 2 cut(s) 53, 538
Van91I CCANNNNNTGG 1 cut(s) 898
XapI RAATTY 3 cut(s) 801, 995, 1265
XceI RCATGY 3 cut(s) 358, 362, 480
XcmI CCANNNNNNNNNTGG 1 cut(s) 1222
XmiI GTMKAC 1 cut(s) 1360
Zsp2I ATGCAT 1 cut(s) 360
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.