Rh7DG179000

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
16477814 .. 16480271
2458 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG179000.1

Sequence Viewer

Length: 1452 bp
ATGTGGGCTTTGTGCTTTGGAGCATTGGTTGTTATAAGCATTACTCATTGGGTTTACAGGTGGAGGAATCCCAAATGCAATGGCAAGCTTCCACCAGGTTCAATGGGATTGCCACTTATTGGGGAGACTTTACAGTTCTTCACTCCCAACACCTCTTCTGATATTCCTCCCTTCATCAAGAAAAGGATGGAAAGGTATGGGCCAATTTTCAGGACTAATTTGGTGGGAAGACCAGTAATAGTATCAACAGACCCGGATCTCAATTACTTCGTATTCCAACAAGAGGGTAATTTGTTTCATAGCTCATATCCTTATACCTTCACGGAGATTTTTGGGAGACAAAATGTGGGTAACTTGCATGGGATCACGTACAAGTACCTCAAGAACATAGTGCTCCATCTCTTTGGCCCTGAAAGCCTTAAAAAGATGATCCCAGAAATTGAAGAGGCAGCACTCAGAAGATTACAACAATGGTCATGTGAGGACACAATAGAATTCAAAGATGCATCTGCAAGTCTGATATTTGATCTTACCGCAAAGAAACTTATCAGTTATGACTCAGAAAACTGCTCGGAGAAGAATTTACGCAAAAACTTCGTTGCATTCATACAAGGATTGATTTCCTTCCCTGTGGACATCCCTGGAACAGCTTATCACAAATGTTTACAGGGTAGGAAAAATGCAATGAGAATGTTGGTAAACCTGCTACAGGAAAGACGAGAAAAGCCGCGAAAGCAGCCTATAGATTTTTTCGATCACGTGCTTGAAGAACTCAAGAAAGAGGAAACGATGTTAACTGAAGAAATTTTTCTGGATTTAATGTTTGTACTGCTTTTCGCGAGCTTTGAAACAACTTCCCTAGCTCTAACATTAGCCATCAAGTTTCTTTCAGACCACCCTGCAGTGCTAAAGAAATTAACGGAAGAGCATGGGATGATCATAAAGCAAAGGGAAAATGCTGATGCTGGACTTACATGGAAAGAATACAAATCAATGACATTCACATTTCAGATCATCAACGAAACAGTTAGACTGGCAAATATAGTTCCAGCTATCTTTCGCAAAGCAATAAGAGAGATACAGTTTAAAGGACATACCATTCCAGCAGGTTGGGCAGTAATGGTTTGTCCCCCGGCCGTACACTTAAACCCTCAAAAATATGATGATCCTGTGGCCTTCAATCCAGGGAGATGGGAGGGAATGCTAACAAGTAGTGCATCAAAAAATTTCATGGCTTTTGGCGGTGGCATGAGATTCTGTGTTGGAACAGACTTTGCTAAGGCGCAGATGGCTGTATTTCTGCATTGCTTGGTGACCAAGTACAGGTGGCAAGCAGTGGGGGGAGGAAATATAGTCCGAACTCCGGGTTTACAATTCCCGGATGGTTTTCACATTCGAATACAGGAGAAAGAAGATACAAGTAACAGGAAACAGCAAACTCCAGATGCTTGA

Protein Analysis

483

Amino Acids

55.22

Weight (kDa)

8.99

Isoelectric Point (pI)

42.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 31 - 450 1.9e-62 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 35
Acc36I ACCTGC 2 cut(s) 711, 1097
AccB7I CCANNNNNTGG 1 cut(s) 119
AccII CGCG 2 cut(s) 730, 839
AciI CCGC 3 cut(s) 534, 728, 1242
AclWI GGATC 4 cut(s) 264, 371, 424, 1160
AcoI YGGCCR 1 cut(s) 1134
AcsI RAATTY 4 cut(s) 494, 580, 804, 1225
AcuI CTGAAG 1 cut(s) 819
AcvI CACGTG 1 cut(s) 760
AfaI GTAC 5 cut(s) 371, 377, 828, 1140, 1322
AfiI CCNNNNNNNGG 5 cut(s) 119, 283, 709, 1323, 1363
AgsI TTSAA 6 cut(s) 102, 443, 499, 767, 848, 1180
AjnI CCWGG 3 cut(s) 94, 640, 1183
AluBI AGCT 6 cut(s) 88, 303, 650, 843, 863, 1052
AluI AGCT 6 cut(s) 88, 303, 650, 843, 863, 1052
Alw21I GWGCWC 1 cut(s) 396
Alw26I GTCTC 2 cut(s) 119, 331
AlwI GGATC 4 cut(s) 264, 371, 424, 1160
AoxI GGCC 4 cut(s) 200, 406, 1134, 1173
ApeKI GCWGC 2 cut(s) 449, 736
ApoI RAATTY 4 cut(s) 494, 580, 804, 1225
Asp700I GAANNNNTTC 1 cut(s) 807
AspLEI GCGC 1 cut(s) 1285
AspS9I GGNCC 2 cut(s) 200, 407
AsuC2I CCSGG 4 cut(s) 254, 1133, 1365, 1379
AsuHPI GGTGA 1 cut(s) 1324
AsuII TTCGAA 1 cut(s) 1396
BbrPI CACGTG 1 cut(s) 760
BbsI GAAGAC 1 cut(s) 235
Bbv12I GWGCWC 1 cut(s) 396
BbvI GCAGC 2 cut(s) 461, 748
BccI CCATC 6 cut(s) 181, 405, 884, 1185, 1282, 1376
BceAI ACGGC 1 cut(s) 1121
BcgI CGANNNNNNTGC 2 cut(s) 577, 611
BciT130I CCWGG 3 cut(s) 96, 642, 1185
BclI TGATCA 1 cut(s) 936
BcnI CCSGG 4 cut(s) 254, 1133, 1365, 1379
BcoDI GTCTC 2 cut(s) 119, 331
BfaI CTAG 1 cut(s) 860
BfmI CTRYAG 3 cut(s) 707, 741, 900
BfuAI ACCTGC 2 cut(s) 711, 1097
BisI GCNGC 3 cut(s) 450, 728, 737
BlsI GCNGC 3 cut(s) 451, 729, 738
Bme1390I CCNGG 7 cut(s) 96, 254, 642, 1133, 1185, 1365, 1379
BmgT120I GGNCC 2 cut(s) 200, 407
BmrFI CCNGG 7 cut(s) 96, 254, 642, 1133, 1185, 1365, 1379
BmsI GCATC 5 cut(s) 493, 515, 952, 1226, 1435
BpiI GAAGAC 1 cut(s) 235
BpmI CTGGAG 1 cut(s) 1425
Bpu10I CCTNAGC 1 cut(s) 1278
Bpu14I TTCGAA 1 cut(s) 1396
BpuEI CTTGAG 2 cut(s) 365, 758
BpuMI CCSGG 4 cut(s) 254, 1133, 1365, 1379
BsaAI YACGTR 2 cut(s) 369, 760
BsaJI CCNNGG 3 cut(s) 640, 1131, 1184
BsaXI ACNNNNNCTCC 2 cut(s) 12, 42
Bsc4I CCNNNNNNNGG 5 cut(s) 119, 283, 709, 1323, 1363
Bse1I ACTGG 2 cut(s) 233, 1038
Bse3DI GCAATG 3 cut(s) 85, 690, 1303
BseBI CCWGG 3 cut(s) 96, 642, 1185
BseDI CCNNGG 3 cut(s) 640, 1131, 1184
BseGI GGATG 4 cut(s) 192, 636, 939, 1387
BseLI CCNNNNNNNGG 5 cut(s) 119, 283, 709, 1323, 1363
BseMI GCAATG 3 cut(s) 85, 690, 1303
BseMII CTCAG 2 cut(s) 469, 573
BseNI ACTGG 2 cut(s) 233, 1038
BseX3I CGGCCG 1 cut(s) 1134
BseXI GCAGC 2 cut(s) 461, 748
Bsh1236I CGCG 2 cut(s) 730, 839
Bsh1285I CGRYCG 1 cut(s) 1137
BshFI GGCC 4 cut(s) 202, 408, 1136, 1175
BsiEI CGRYCG 1 cut(s) 1137
BsiHKAI GWGCWC 1 cut(s) 396
BsiSI CCGG 4 cut(s) 254, 1133, 1364, 1379
BslFI GGGAC 1 cut(s) 1113
BslI CCNNNNNNNGG 5 cut(s) 119, 283, 709, 1323, 1363
BsmAI GTCTC 2 cut(s) 119, 331
BsmFI GGGAC 1 cut(s) 1113
BsmI GAATGC 2 cut(s) 602, 1206
BsnI GGCC 4 cut(s) 202, 408, 1136, 1175
Bsp119I TTCGAA 1 cut(s) 1396
Bsp1286I GDGCHC 1 cut(s) 396
Bsp143I GATC 8 cut(s) 256, 363, 429, 526, 754, 936, 1011, 1165
Bsp68I TCGCGA 1 cut(s) 839
BspACI CCGC 3 cut(s) 534, 728, 1242
BspANI GGCC 4 cut(s) 202, 408, 1136, 1175
BspCNI CTCAG 2 cut(s) 468, 572
BspFNI CGCG 2 cut(s) 730, 839
BspMAI CTGCAG 1 cut(s) 904
BspMI ACCTGC 2 cut(s) 711, 1097
BspPI GGATC 4 cut(s) 264, 371, 424, 1160
BspQI GCTCTTC 1 cut(s) 918
BspT104I TTCGAA 1 cut(s) 1396
BsrDI GCAATG 3 cut(s) 85, 690, 1303
BsrI ACTGG 2 cut(s) 233, 1038
BssECI CCNNGG 3 cut(s) 640, 1131, 1184
BssMI GATC 8 cut(s) 256, 363, 429, 526, 754, 936, 1011, 1165
Bst2UI CCWGG 3 cut(s) 96, 642, 1185
Bst4CI ACNGT 3 cut(s) 135, 1027, 1083
Bst6I CTCTTC 3 cut(s) 160, 438, 918
BstBAI YACGTR 2 cut(s) 369, 760
BstBI TTCGAA 1 cut(s) 1396
BstC8I GCNNGC 3 cut(s) 86, 841, 1332
BstDEI CTNAG 3 cut(s) 455, 559, 1278
BstEII GGTNACC 1 cut(s) 1312
BstENI CCTNNNNNAGG 1 cut(s) 707
BstF5I GGATG 4 cut(s) 192, 636, 939, 1387
BstFNI CGCG 2 cut(s) 730, 839
BstHHI GCGC 1 cut(s) 1285
BstKTI GATC 8 cut(s) 259, 366, 432, 529, 757, 939, 1014, 1168
BstMAI GTCTC 2 cut(s) 119, 331
BstMBI GATC 8 cut(s) 256, 363, 429, 526, 754, 936, 1011, 1165
BstMCI CGRYCG 1 cut(s) 1137
BstMWI GCNNNNNNNGC 5 cut(s) 414, 733, 736, 1112, 1289
BstNI CCWGG 3 cut(s) 96, 642, 1185
BstPI GGTNACC 1 cut(s) 1312
BstSCI CCNGG 7 cut(s) 94, 252, 640, 1131, 1183, 1363, 1377
BstSFI CTRYAG 3 cut(s) 707, 741, 900
BstUI CGCG 2 cut(s) 730, 839
BstV1I GCAGC 2 cut(s) 461, 748
BstV2I GAAGAC 1 cut(s) 235
BstX2I RGATCY 1 cut(s) 256
BstXI CCANNNNNNTGG 3 cut(s) 404, 1110, 1191
BstYI RGATCY 1 cut(s) 256
BstZI CGGCCG 1 cut(s) 1134
BsuRI GGCC 4 cut(s) 202, 408, 1136, 1175
BtsCI GGATG 4 cut(s) 192, 636, 939, 1387
BtsI GCAGTG 2 cut(s) 909, 1341
BtsIMutI CAGTG 2 cut(s) 909, 1341
BtuMI TCGCGA 1 cut(s) 839
BveI ACCTGC 2 cut(s) 711, 1097
Cac8I GCNNGC 3 cut(s) 86, 841, 1332
CfoI GCGC 1 cut(s) 1285
Cfr13I GGNCC 2 cut(s) 200, 407
CsiI ACCWGGT 1 cut(s) 94
Csp6I GTAC 5 cut(s) 370, 376, 827, 1139, 1321
CviAII CATG 6 cut(s) 359, 477, 929, 975, 1231, 1249
CviQI GTAC 5 cut(s) 370, 376, 827, 1139, 1321
DdeI CTNAG 3 cut(s) 455, 559, 1278
DpnI GATC 8 cut(s) 258, 365, 431, 528, 756, 938, 1013, 1167
DpnII GATC 8 cut(s) 256, 363, 429, 526, 754, 936, 1011, 1165
DraI TTTAAA 1 cut(s) 1087
EaeI YGGCCR 1 cut(s) 1134
EagI CGGCCG 1 cut(s) 1134
Eam1104I CTCTTC 3 cut(s) 160, 438, 918
EarI CTCTTC 3 cut(s) 160, 438, 918
EclXI CGGCCG 1 cut(s) 1134
Eco52I CGGCCG 1 cut(s) 1134
Eco57I CTGAAG 1 cut(s) 819
Eco72I CACGTG 1 cut(s) 760
Eco91I GGTNACC 1 cut(s) 1312
EcoNI CCTNNNNNAGG 1 cut(s) 707
EcoO65I GGTNACC 1 cut(s) 1312
EcoRI GAATTC 1 cut(s) 494
EcoRII CCWGG 3 cut(s) 94, 640, 1183
EcoT22I ATGCAT 1 cut(s) 508
FaeI CATG 6 cut(s) 362, 480, 932, 978, 1234, 1252
FaqI GGGAC 1 cut(s) 1113
FatI CATG 6 cut(s) 358, 476, 928, 974, 1230, 1248
FbaI TGATCA 1 cut(s) 936
Fnu4HI GCNGC 3 cut(s) 450, 728, 737
FokI GGATG 4 cut(s) 199, 623, 946, 1394
Fsp4HI GCNGC 3 cut(s) 450, 728, 737
FspBI CTAG 1 cut(s) 860
GlaI GCGC 1 cut(s) 1284
GluI GCNGC 3 cut(s) 450, 728, 737
GsuI CTGGAG 1 cut(s) 1425
HaeIII GGCC 4 cut(s) 202, 408, 1136, 1175
HapII CCGG 4 cut(s) 254, 1133, 1364, 1379
HhaI GCGC 1 cut(s) 1285
Hin1II CATG 6 cut(s) 362, 480, 932, 978, 1234, 1252
Hin6I GCGC 1 cut(s) 1283
HinP1I GCGC 1 cut(s) 1283
HincII GTYRAC 1 cut(s) 795
HindII GTYRAC 1 cut(s) 795
HindIII AAGCTT 1 cut(s) 86
HinfI GANTC 3 cut(s) 67, 557, 1254
HpaI GTTAAC 1 cut(s) 795
HpaII CCGG 4 cut(s) 254, 1133, 1364, 1379
HphI GGTGA 1 cut(s) 1324
Hpy166II GTNNAC 7 cut(s) 55, 634, 665, 700, 795, 1141, 1370
Hpy188I TCNGA 8 cut(s) 160, 458, 519, 562, 574, 892, 1011, 1358
Hpy188III TCNNGA 7 cut(s) 178, 211, 382, 775, 812, 838, 1442
Hpy8I GTNNAC 7 cut(s) 55, 634, 665, 700, 795, 1141, 1370
HpyAV CCTTC 4 cut(s) 181, 328, 634, 1186
HpyCH4III ACNGT 3 cut(s) 135, 1027, 1083
HpyCH4IV ACGT 2 cut(s) 368, 759
HpyCH4V TGCA 9 cut(s) 78, 358, 506, 512, 602, 683, 902, 1217, 1303
HpyF10VI GCNNNNNNNGC 5 cut(s) 414, 733, 736, 1112, 1289
HpyF3I CTNAG 3 cut(s) 455, 559, 1278
HpySE526I ACGT 2 cut(s) 368, 759
Hsp92II CATG 6 cut(s) 362, 480, 932, 978, 1234, 1252
HspAI GCGC 1 cut(s) 1283
Ksp22I TGATCA 1 cut(s) 936
KspAI GTTAAC 1 cut(s) 795
Kzo9I GATC 8 cut(s) 256, 363, 429, 526, 754, 936, 1011, 1165
LguI GCTCTTC 1 cut(s) 918
LmnI GCTCC 2 cut(s) 20, 399
Lsp1109I GCAGC 2 cut(s) 461, 748
LweI GCATC 5 cut(s) 493, 515, 952, 1226, 1435
MabI ACCWGGT 1 cut(s) 94
MaeI CTAG 1 cut(s) 860
MaeII ACGT 2 cut(s) 368, 759
MaeIII GTNAC 3 cut(s) 350, 1312, 1421
MalI GATC 8 cut(s) 258, 365, 431, 528, 756, 938, 1013, 1167
MboI GATC 8 cut(s) 256, 363, 429, 526, 754, 936, 1011, 1165
MflI RGATCY 1 cut(s) 256
MhlI GDGCHC 1 cut(s) 396
MlyI GAGTC 1 cut(s) 551
MmeI TCCRAC 2 cut(s) 301, 1243
Mph1103I ATGCAT 1 cut(s) 508
MroXI GAANNNNTTC 1 cut(s) 807
MseI TTAA 6 cut(s) 420, 794, 818, 917, 1086, 1145
MspI CCGG 4 cut(s) 254, 1133, 1364, 1379
MspR9I CCNGG 7 cut(s) 96, 254, 642, 1133, 1185, 1365, 1379
Mva1269I GAATGC 2 cut(s) 602, 1206
MvaI CCWGG 3 cut(s) 96, 642, 1185
MvnI CGCG 2 cut(s) 730, 839
MwoI GCNNNNNNNGC 5 cut(s) 414, 733, 736, 1112, 1289
NciI CCSGG 4 cut(s) 254, 1133, 1365, 1379
NdeII GATC 8 cut(s) 256, 363, 429, 526, 754, 936, 1011, 1165
NlaIII CATG 6 cut(s) 362, 480, 932, 978, 1234, 1252
NmuCI GTSAC 1 cut(s) 1312
NruI TCGCGA 1 cut(s) 839
NsiI ATGCAT 1 cut(s) 508
NspV TTCGAA 1 cut(s) 1396
PciSI GCTCTTC 1 cut(s) 918
PctI GAATGC 2 cut(s) 602, 1206
PdmI GAANNNNTTC 1 cut(s) 807
PfeI GAWTC 2 cut(s) 67, 1254
PflMI CCANNNNNTGG 1 cut(s) 119
PfoI TCCNGGA 1 cut(s) 1377
PkrI GCNGC 3 cut(s) 451, 729, 738
PleI GAGTC 1 cut(s) 551
PmaCI CACGTG 1 cut(s) 760
PmlI CACGTG 1 cut(s) 760
PpsI GAGTC 1 cut(s) 551
Ppu21I YACGTR 2 cut(s) 369, 760
PsiI TTATAA 1 cut(s) 35
Psp6I CCWGG 3 cut(s) 94, 640, 1183
PspCI CACGTG 1 cut(s) 760
PspEI GGTNACC 1 cut(s) 1312
PspGI CCWGG 3 cut(s) 94, 640, 1183
PspPI GGNCC 2 cut(s) 200, 407
PstI CTGCAG 1 cut(s) 904
PsuI RGATCY 1 cut(s) 256
RruI TCGCGA 1 cut(s) 839
RsaI GTAC 5 cut(s) 371, 377, 828, 1140, 1322
RsaNI GTAC 5 cut(s) 370, 376, 827, 1139, 1321
SapI GCTCTTC 1 cut(s) 918
SaqAI TTAA 6 cut(s) 420, 794, 818, 917, 1086, 1145
SatI GCNGC 3 cut(s) 450, 728, 737
Sau3AI GATC 8 cut(s) 256, 363, 429, 526, 754, 936, 1011, 1165
Sau96I GGNCC 2 cut(s) 200, 407
SchI GAGTC 1 cut(s) 551
ScrFI CCNGG 7 cut(s) 96, 254, 642, 1133, 1185, 1365, 1379
SduI GDGCHC 1 cut(s) 396
SexAI ACCWGGT 1 cut(s) 94
SfaNI GCATC 5 cut(s) 493, 515, 952, 1226, 1435
SfcI CTRYAG 3 cut(s) 707, 741, 900
SfuI TTCGAA 1 cut(s) 1396
SmlI CTYRAG 2 cut(s) 380, 773
SmoI CTYRAG 2 cut(s) 380, 773
SsiI CCGC 3 cut(s) 534, 728, 1242
SspMI CTAG 1 cut(s) 860
StyD4I CCNGG 7 cut(s) 94, 252, 640, 1131, 1183, 1363, 1377
TaaI ACNGT 3 cut(s) 135, 1027, 1083
TaiI ACGT 2 cut(s) 371, 762
TaqI TCGA 2 cut(s) 753, 1396
TatI WGTACW 2 cut(s) 826, 1320
TauI GCSGC 1 cut(s) 730
TfiI GAWTC 2 cut(s) 67, 1254
Tru1I TTAA 6 cut(s) 420, 794, 818, 917, 1086, 1145
Tru9I TTAA 6 cut(s) 420, 794, 818, 917, 1086, 1145
TscAI CASTG 2 cut(s) 909, 1341
TseFI GTSAC 1 cut(s) 1312
TseI GCWGC 2 cut(s) 449, 736
Tsp45I GTSAC 1 cut(s) 1312
TspDTI ATGAA 4 cut(s) 163, 287, 595, 1219
TspGWI ACGGA 2 cut(s) 338, 935
TspRI CASTG 2 cut(s) 909, 1341
Van91I CCANNNNNTGG 1 cut(s) 119
XagI CCTNNNNNAGG 1 cut(s) 707
XapI RAATTY 4 cut(s) 494, 580, 804, 1225
XmnI GAANNNNTTC 1 cut(s) 807
XspI CTAG 1 cut(s) 860
Zsp2I ATGCAT 1 cut(s) 508
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.