Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0001401

Physical Location & Seq

Genomic Coordinates Reverse (-)

15526137 .. 15542062

Gene Structure 15926 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G015440.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1446 bp

ATGTTGGGTTTGTGCATTGTAGCATTAGTTGCTGTAGGCATTACACACTGGGTGTATAGGTGGAGAAATCCCAGATGCAATGGCAAACTTCCACCAGGTTCAATGGGTTTGCCACTGATAGGCGAGACCATACAGTTCCTCATTTCAAGCACCTCCTTTGATATTCCTCCCTTCATTAAGACAAGGATGGAAAGGTACGGACCAATATTCAAGAGCCAATTGATGGGAGCACCTTTCATAGTATCGACAGATCCCGAACTGAATATGTATGTCTTCCAACAAGACGATAAATTGTTTGAAAGCGGGTATCCAGATTCTGTCAAAAAGATTTTTGGTGAAAAACAGTTGGGAAACATTCATGTGTCGGTTTACAAATACCTCAAGAGCATGATGCTTAACCTCATTGGCCCTGAAAGCCTCAAAAATATGCTCCCTGAAATCGAGCAATCGACTCGCACAAGATTAGAGCAATGGTCGTGTCAAGACACTACAGAATTGAAAGAAGCAACTTCAGAAATGATATTTGCACTCACTGCAAAGATACTCATGAGTTATGATTCAAGTAAGTCCTCAGACAACTTAAGGGCAAGCTTCGATGCATTCGCTCGGGGAATGTTCTCCCTCCCATTGCCGATCCCCGGAACAGCTTTTCACAAATGTTTACAGGGTAGGAAAAGGGTAATGAGAACACTAAAATGCATGCTACAGGAAAGGCGTGCAATGTCCCGAGAGCAACCTATCGATTTTTTTGATCACGTGCTTGAAGAACTTAAGAAAGAAGGAACAGTCTTAACGGAGGAAATTTCTTTTGACTTAATGTTTTTGTTACTCTTTGCGAGCTTTGATACAACTTCCACAGCTATGACTCTACTCCTCAAGTTTGTTTCAGACCATCCTCTGGTGCTAAAGCAATTGCTGCAAGAACATGAGATGATTGTAAAGCAAAGGGAGAATGCTAATTCAGGGCTTACATGGGAAGAATACAAGTCCATGACATTCACATTGCAGGTCATCAATGAAACGGTTAGACTGACAAATCATGTTCCAGGAATGTTTCGCAAGGCAATAAAAGAAGTACAATTCAAAGGATATACAATTCCAGAAGGCTGGTCAGTTATGCTTTGTCCCCAAGTCCAACACTTGAACCCAGAAAAATATGAAGATCCTATGGCCTTCAATCCATGGAGATGGGAGGGAAAGGAGAGTGGTGCATCGAAAGATTTCATGGCTTTTGGTGGTGGCTTGAGATCCTGCGTAGGAGCAGCGTTTGGCAAGGTGCAGATGGCTGTATTTCTTCATTGCTTCGTTACAAAGTACAGGTGGGAGGTAATCAAAGGAGGAAATATATTCCGAAATCCTTGGATACAATTTCCAGGGGGTTTTCACATTCGGGTACTGAAGAAAGACACAAGTAACAGTAGACAGCATATAAGTCCAGATACTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004497 GO:0006629 GO:0006694 GO:0007275 GO:0008150 GO:0008152 GO:0008202 GO:0008610 GO:0009058 GO:0010268 GO:0010817 GO:0016125 GO:0016128 GO:0016129 GO:0016131 GO:0016132 GO:0016491 GO:0032501 GO:0032502 GO:0042445 GO:0042446 GO:0042592 GO:0044238 GO:0048856 GO:0048878 GO:0055088 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:1901360 GO:1901362 GO:1901576 GO:1901615 GO:1901617

KEGG Pathways

Metabolic & Signaling

ko00830 ko01100 map00830 map01100

Pfam Domains

Protein Families

p450

Protein Analysis

481

Amino Acids

55.08

Weight (kDa)

8.83

Isoelectric Point (pI)

43.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	31 - 448	2.4e-58	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001401)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12740 AT1G12740 AT1G12740 AT1G12740
fragaria_vesca	FvH4_5g01580 FvH4_5g01580 FvH4_5g01580 FvH4_5g01580 FvH4_5g01581 FvH4_5g01600 FvH4_5g01640 FvH4_5g01640 FvH4_5g01641 FvH4_5g01641 FvH4_5g01641 FvH4_5g01641 FvH4_5g01641 FvH4_5g01641
malus_domestica	MD04G1066300.v1.1 MD04G1066400.v1.1
prunus_persica	Prupe.5G092000_v2.0.a1 Prupe.5G092300_v2.0.a1
rosa_chinensis	RchiOBHm_Chr7g0199081 RchiOBHm_Chr7g0199091 RchiOBHm_Chr7g0199101
rosa_laevigata	RLG00000003815 RLG00000003817 RLG00000008398
rosa_multiflora	Rmu_sc0006266.1_g000039 Rmu_sc0006266.1_g000047
rosa_roxburghii	Rroxscaffold_3G00257080 Rroxscaffold_3G00257120 Rroxscaffold_3G00257130 Rroxscaffold_3G00257140
rosa_rugosa	Rorug07G0052500 Rorug07G0052600
rosa_samantha	Rh2CG355800 Rh4BG380800 Rh4CG395400 Rh7AG175900 Rh7AG176000 Rh7BG179100 Rh7BG179200 Rh7BG179500 Rh7CG185000 Rh7CG185100 Rh7DG178700 Rh7DG178800 Rh7DG179000
rosa_wichuraiana	Rw7G015430 Rw7G015440 Rw7G015450 Rw7G015480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	997
AccB7I	CCANNNNNTGG	2 cut(s)	223, 898
AccI	GTMKAC	1 cut(s)	1420
AciI	CCGC	1 cut(s)	303
AclWI	GGATC	4 cut(s)	245, 628, 1157, 1242
AcsI	RAATTY	1 cut(s)	801
AcuI	CTGAAG	2 cut(s)	495, 1418
AcvI	CACGTG	1 cut(s)	757
AdeI	CACNNNGTG	1 cut(s)	52
AfaI	GTAC	4 cut(s)	197, 1077, 1316, 1395
AfiI	CCNNNNNNNGG	4 cut(s)	119, 223, 638, 898
AflII	CTTAAG	2 cut(s)	580, 770
AjnI	CCWGG	3 cut(s)	94, 1045, 1372
AluBI	AGCT	4 cut(s)	591, 647, 840, 860
AluI	AGCT	4 cut(s)	591, 647, 840, 860
Alw21I	GWGCWC	1 cut(s)	232
Alw26I	GTCTC	1 cut(s)	119
AlwI	GGATC	4 cut(s)	245, 628, 1157, 1242
AlwNI	CAGNNNCTG	1 cut(s)	317
Ama87I	CYCGRG	2 cut(s)	606, 726
AoxI	GGCC	2 cut(s)	406, 1170
ApeKI	GCWGC	2 cut(s)	916, 1262
ApoI	RAATTY	1 cut(s)	801
Asp700I	GAANNNNTTC	1 cut(s)	1220
AspS9I	GGNCC	2 cut(s)	200, 407
AsuC2I	CCSGG	1 cut(s)	639
AsuHPI	GGTGA	1 cut(s)	347
AvaI	CYCGRG	2 cut(s)	606, 726
AvaII	GGWCC	1 cut(s)	200
BbrPI	CACGTG	1 cut(s)	757
BbsI	GAAGAC	1 cut(s)	265
Bbv12I	GWGCWC	1 cut(s)	232
BbvI	GCAGC	2 cut(s)	903, 1274
BccI	CCATC	5 cut(s)	181, 217, 900, 1182, 1276
BcgI	CGANNNNNNTGC	2 cut(s)	434, 468
BciT130I	CCWGG	3 cut(s)	96, 1047, 1374
BciVI	GTATCC	2 cut(s)	318, 1356
BclI	TGATCA	1 cut(s)	751
BcnI	CCSGG	1 cut(s)	639
BcoDI	GTCTC	1 cut(s)	119
BfmI	CTRYAG	3 cut(s)	33, 489, 704
BfrI	CTTAAG	2 cut(s)	580, 770
BfuAI	ACCTGC	1 cut(s)	997
BfuI	GTATCC	2 cut(s)	318, 1356
BisI	GCNGC	2 cut(s)	917, 1263
BlsI	GCNGC	2 cut(s)	918, 1264
Bme1390I	CCNGG	4 cut(s)	96, 639, 1047, 1374
Bme18I	GGWCC	1 cut(s)	200
BmeT110I	CYCGRG	2 cut(s)	606, 726
BmgT120I	GGNCC	2 cut(s)	200, 407
BmrFI	CCNGG	4 cut(s)	96, 639, 1047, 1374
BmrI	ACTGGG	1 cut(s)	58
BmsI	GCATC	4 cut(s)	65, 381, 586, 1220
BmuI	ACTGGG	1 cut(s)	58
BpiI	GAAGAC	1 cut(s)	265
BpuEI	CTTGAG	3 cut(s)	365, 860, 1264
BpuMI	CCSGG	1 cut(s)	639
Bsa29I	ATCGAT	1 cut(s)	741
BsaAI	YACGTR	1 cut(s)	757
BsaI	GGTCTC	1 cut(s)	119
BsaJI	CCNNGG	4 cut(s)	637, 1181, 1358, 1373
Bsc4I	CCNNNNNNNGG	4 cut(s)	119, 223, 638, 898
Bse1I	ACTGG	1 cut(s)	53
Bse3DI	GCAATG	6 cut(s)	85, 476, 626, 726, 1001, 1297
BseBI	CCWGG	3 cut(s)	96, 1047, 1374
BseCI	ATCGAT	1 cut(s)	741
BseDI	CCNNGG	4 cut(s)	637, 1181, 1358, 1373
BseGI	GGATG	2 cut(s)	192, 892
BseLI	CCNNNNNNNGG	4 cut(s)	119, 223, 638, 898
BseMI	GCAATG	6 cut(s)	85, 476, 626, 726, 1001, 1297
BseMII	CTCAG	1 cut(s)	585
BseNI	ACTGG	1 cut(s)	53
BseRI	GAGGAG	1 cut(s)	863
BseXI	GCAGC	2 cut(s)	903, 1274
BsgI	GTGCAG	1 cut(s)	1298
BshFI	GGCC	2 cut(s)	408, 1172
BshVI	ATCGAT	1 cut(s)	741
BsiHKAI	GWGCWC	1 cut(s)	232
BsiHKCI	CYCGRG	2 cut(s)	606, 726
BsiSI	CCGG	1 cut(s)	639
BslFI	GGGAC	2 cut(s)	709, 1110
BslI	CCNNNNNNNGG	4 cut(s)	119, 223, 638, 898
BsmAI	GTCTC	1 cut(s)	119
BsmFI	GGGAC	2 cut(s)	709, 1110
BsmI	GAATGC	2 cut(s)	599, 958
BsnI	GGCC	2 cut(s)	408, 1172
Bso31I	GGTCTC	1 cut(s)	119
BsoBI	CYCGRG	2 cut(s)	606, 726
Bsp1286I	GDGCHC	1 cut(s)	232
Bsp143I	GATC	5 cut(s)	250, 633, 751, 1162, 1247
Bsp19I	CCATGG	1 cut(s)	1181
BspACI	CCGC	1 cut(s)	303
BspANI	GGCC	2 cut(s)	408, 1172
BspCNI	CTCAG	1 cut(s)	584
BspDI	ATCGAT	1 cut(s)	741
BspHI	TCATGA	1 cut(s)	546
BspMI	ACCTGC	1 cut(s)	997
BspPI	GGATC	4 cut(s)	245, 628, 1157, 1242
BspTI	CTTAAG	2 cut(s)	580, 770
BspTNI	GGTCTC	1 cut(s)	119
BsrDI	GCAATG	6 cut(s)	85, 476, 626, 726, 1001, 1297
BsrI	ACTGG	1 cut(s)	53
BssECI	CCNNGG	4 cut(s)	637, 1181, 1358, 1373
BssMI	GATC	5 cut(s)	250, 633, 751, 1162, 1247
BssT1I	CCWWGG	2 cut(s)	1181, 1358
Bst2UI	CCWGG	3 cut(s)	96, 1047, 1374
Bst4CI	ACNGT	5 cut(s)	135, 345, 787, 1024, 1418
BstAFI	CTTAAG	2 cut(s)	580, 770
BstAPI	GCANNNNNTGC	3 cut(s)	29, 533, 916
BstBAI	YACGTR	1 cut(s)	757
BstC8I	GCNNGC	4 cut(s)	589, 701, 717, 838
BstDEI	CTNAG	1 cut(s)	571
BstDSI	CCRYGG	1 cut(s)	1181
BstF5I	GGATG	2 cut(s)	192, 892
BstKTI	GATC	5 cut(s)	253, 636, 754, 1165, 1250
BstMAI	GTCTC	1 cut(s)	119
BstMBI	GATC	5 cut(s)	250, 633, 751, 1162, 1247
BstMWI	GCNNNNNNNGC	4 cut(s)	29, 414, 533, 916
BstNI	CCWGG	3 cut(s)	96, 1047, 1374
BstNSI	RCATGY	1 cut(s)	703
BstSCI	CCNGG	4 cut(s)	94, 637, 1045, 1372
BstSFI	CTRYAG	3 cut(s)	33, 489, 704
BstV1I	GCAGC	2 cut(s)	903, 1274
BstV2I	GAAGAC	1 cut(s)	265
BstX2I	RGATCY	3 cut(s)	250, 1162, 1247
BstXI	CCANNNNNNTGG	2 cut(s)	1107, 1188
BstYI	RGATCY	3 cut(s)	250, 1162, 1247
Bsu15I	ATCGAT	1 cut(s)	741
BsuI	GTATCC	2 cut(s)	318, 1356
BsuRI	GGCC	2 cut(s)	408, 1172
BsuTUI	ATCGAT	1 cut(s)	741
BtgI	CCRYGG	1 cut(s)	1181
BtsCI	GGATG	2 cut(s)	192, 892
BtsI	GCAGTG	1 cut(s)	531
BtsIMutI	CAGTG	3 cut(s)	46, 113, 531
BveI	ACCTGC	1 cut(s)	997
Cac8I	GCNNGC	4 cut(s)	589, 701, 717, 838
CaiI	CAGNNNCTG	1 cut(s)	317
CciI	TCATGA	1 cut(s)	546
Cfr13I	GGNCC	2 cut(s)	200, 407
ClaI	ATCGAT	1 cut(s)	741
CsiI	ACCWGGT	1 cut(s)	94
Csp6I	GTAC	4 cut(s)	196, 1076, 1315, 1394
CviQI	GTAC	4 cut(s)	196, 1076, 1315, 1394
DdeI	CTNAG	1 cut(s)	571
DpnI	GATC	5 cut(s)	252, 635, 753, 1164, 1249
DpnII	GATC	5 cut(s)	250, 633, 751, 1162, 1247
DraIII	CACNNNGTG	1 cut(s)	52
Eco130I	CCWWGG	2 cut(s)	1181, 1358
Eco31I	GGTCTC	1 cut(s)	119
Eco47I	GGWCC	1 cut(s)	200
Eco57I	CTGAAG	2 cut(s)	495, 1418
Eco72I	CACGTG	1 cut(s)	757
Eco88I	CYCGRG	2 cut(s)	606, 726
EcoRII	CCWGG	3 cut(s)	94, 1045, 1372
EcoT14I	CCWWGG	2 cut(s)	1181, 1358
EcoT22I	ATGCAT	2 cut(s)	601, 701
ErhI	CCWWGG	2 cut(s)	1181, 1358
FaqI	GGGAC	2 cut(s)	709, 1110
FauI	CCCGC	1 cut(s)	296
FbaI	TGATCA	1 cut(s)	751
FblI	GTMKAC	1 cut(s)	1420
Fnu4HI	GCNGC	2 cut(s)	917, 1263
FokI	GGATG	2 cut(s)	199, 879
Fsp4HI	GCNGC	2 cut(s)	917, 1263
GluI	GCNGC	2 cut(s)	917, 1263
HaeIII	GGCC	2 cut(s)	408, 1172
HapII	CCGG	1 cut(s)	639
HindIII	AAGCTT	1 cut(s)	589
HinfI	GANTC	4 cut(s)	314, 451, 557, 865
HpaII	CCGG	1 cut(s)	639
HphI	GGTGA	1 cut(s)	347
Hpy166II	GTNNAC	3 cut(s)	370, 662, 1421
Hpy188I	TCNGA	4 cut(s)	514, 574, 889, 1352
Hpy188III	TCNNGA	9 cut(s)	211, 254, 311, 382, 482, 547, 726, 1100, 1436
Hpy8I	GTNNAC	3 cut(s)	370, 662, 1421
HpyAV	CCTTC	4 cut(s)	181, 773, 1097, 1183
HpyCH4III	ACNGT	5 cut(s)	135, 345, 787, 1024, 1418
HpyCH4IV	ACGT	1 cut(s)	756
HpyF10VI	GCNNNNNNNGC	4 cut(s)	29, 414, 533, 916
HpyF3I	CTNAG	1 cut(s)	571
HpySE526I	ACGT	1 cut(s)	756
Ksp22I	TGATCA	1 cut(s)	751
Kzo9I	GATC	5 cut(s)	250, 633, 751, 1162, 1247
LmnI	GCTCC	3 cut(s)	227, 435, 1259
Lsp1109I	GCAGC	2 cut(s)	903, 1274
LweI	GCATC	4 cut(s)	65, 381, 586, 1220
MabI	ACCWGGT	1 cut(s)	94
MaeII	ACGT	1 cut(s)	756
MaeIII	GTNAC	3 cut(s)	825, 1306, 1412
MalI	GATC	5 cut(s)	252, 635, 753, 1164, 1249
MboI	GATC	5 cut(s)	250, 633, 751, 1162, 1247
MboII	GAAGA	6 cut(s)	265, 776, 989, 1172, 1286, 1411
MfeI	CAATTG	2 cut(s)	218, 911
MflI	RGATCY	3 cut(s)	250, 1162, 1247
MhlI	GDGCHC	1 cut(s)	232
MluCI	AATT	9 cut(s)	218, 290, 494, 801, 911, 958, 1079, 1095, 1367
MlyI	GAGTC	2 cut(s)	445, 859
MmeI	TCCRAC	2 cut(s)	301, 1159
Mph1103I	ATGCAT	2 cut(s)	601, 701
MroXI	GAANNNNTTC	1 cut(s)	1220
MseI	TTAA	6 cut(s)	177, 396, 581, 771, 791, 815
MslI	CAYNNNNRTG	4 cut(s)	359, 694, 860, 1186
MspCI	CTTAAG	2 cut(s)	580, 770
MspI	CCGG	1 cut(s)	639
MspR9I	CCNGG	4 cut(s)	96, 639, 1047, 1374
MunI	CAATTG	2 cut(s)	218, 911
Mva1269I	GAATGC	2 cut(s)	599, 958
MvaI	CCWGG	3 cut(s)	96, 1047, 1374
MwoI	GCNNNNNNNGC	4 cut(s)	29, 414, 533, 916
NciI	CCSGG	1 cut(s)	639
NcoI	CCATGG	1 cut(s)	1181
NdeII	GATC	5 cut(s)	250, 633, 751, 1162, 1247
NsiI	ATGCAT	2 cut(s)	601, 701
NspI	RCATGY	1 cut(s)	703
PaeI	GCATGC	1 cut(s)	703
PagI	TCATGA	1 cut(s)	546
PctI	GAATGC	2 cut(s)	599, 958
PdmI	GAANNNNTTC	1 cut(s)	1220
PfeI	GAWTC	2 cut(s)	314, 557
PflMI	CCANNNNNTGG	2 cut(s)	223, 898
PfoI	TCCNGGA	1 cut(s)	1045
PkrI	GCNGC	2 cut(s)	918, 1264
PleI	GAGTC	2 cut(s)	445, 859
PmaCI	CACGTG	1 cut(s)	757
PmlI	CACGTG	1 cut(s)	757
PpsI	GAGTC	2 cut(s)	445, 859
Ppu21I	YACGTR	1 cut(s)	757
Psp6I	CCWGG	3 cut(s)	94, 1045, 1372
PspCI	CACGTG	1 cut(s)	757
PspGI	CCWGG	3 cut(s)	94, 1045, 1372
PspPI	GGNCC	2 cut(s)	200, 407
PstNI	CAGNNNCTG	1 cut(s)	317
PsuI	RGATCY	3 cut(s)	250, 1162, 1247
RsaI	GTAC	4 cut(s)	197, 1077, 1316, 1395
RsaNI	GTAC	4 cut(s)	196, 1076, 1315, 1394
RseI	CAYNNNNRTG	4 cut(s)	359, 694, 860, 1186
SaqAI	TTAA	6 cut(s)	177, 396, 581, 771, 791, 815
SatI	GCNGC	2 cut(s)	917, 1263
Sau3AI	GATC	5 cut(s)	250, 633, 751, 1162, 1247
Sau96I	GGNCC	2 cut(s)	200, 407
SchI	GAGTC	2 cut(s)	445, 859
ScrFI	CCNGG	4 cut(s)	96, 639, 1047, 1374
SduI	GDGCHC	1 cut(s)	232
SexAI	ACCWGGT	1 cut(s)	94
SfaNI	GCATC	4 cut(s)	65, 381, 586, 1220
SfcI	CTRYAG	3 cut(s)	33, 489, 704
SinI	GGWCC	1 cut(s)	200
SmiMI	CAYNNNNRTG	4 cut(s)	359, 694, 860, 1186
SmlI	CTYRAG	5 cut(s)	380, 580, 770, 875, 1243
SmoI	CTYRAG	5 cut(s)	380, 580, 770, 875, 1243
SphI	GCATGC	1 cut(s)	703
Sse9I	AATT	9 cut(s)	218, 290, 494, 801, 911, 958, 1079, 1095, 1367
SsiI	CCGC	1 cut(s)	303
SspI	AATATT	1 cut(s)	207
StyD4I	CCNGG	4 cut(s)	94, 637, 1045, 1372
StyI	CCWWGG	2 cut(s)	1181, 1358
TaaI	ACNGT	5 cut(s)	135, 345, 787, 1024, 1418
TaiI	ACGT	1 cut(s)	759
TaqI	TCGA	6 cut(s)	245, 441, 449, 594, 741, 1214
TasI	AATT	9 cut(s)	218, 290, 494, 801, 911, 958, 1079, 1095, 1367
TatI	WGTACW	2 cut(s)	1075, 1314
TfiI	GAWTC	2 cut(s)	314, 557
Tru1I	TTAA	6 cut(s)	177, 396, 581, 771, 791, 815
Tru9I	TTAA	6 cut(s)	177, 396, 581, 771, 791, 815
TscAI	CASTG	3 cut(s)	53, 120, 538
TseI	GCWGC	2 cut(s)	916, 1262
TspDTI	ATGAA	7 cut(s)	163, 226, 347, 1032, 1173, 1213, 1286
TspGWI	ACGGA	2 cut(s)	213, 809
TspRI	CASTG	3 cut(s)	53, 120, 538
Van91I	CCANNNNNTGG	2 cut(s)	223, 898
Vha464I	CTTAAG	2 cut(s)	580, 770
VpaK11BI	GGWCC	1 cut(s)	200
XapI	RAATTY	1 cut(s)	801
XceI	RCATGY	1 cut(s)	703
XmiI	GTMKAC	1 cut(s)	1420
XmnI	GAANNNNTTC	1 cut(s)	1220
Zsp2I	ATGCAT	2 cut(s)	601, 701

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.