RLG00000008398

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
Physical Location & Seq
Forward (+)
30031360 .. 30032107
748 bp
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UTR
Exon/CDS
Intron
RLM00000008398

Sequence Viewer

Length: 381 bp
ATGACATTTACATTGCAGGCCATCAATGAAACGGTTAGACTGGCAAATCAAGTGCCAGGCATCTTTCGCAAGGCAATAAAACAAGTACAGTTAAAGGGTAAGTACTGTCTTCCAAGTTCCAATTATCGAAACTTAATCGTCCGAGTGAAAGGTTGGTCAGTTCTGGGTAAGGAAAGTGGTGCATCTAAAGATTTTATGGCTTTTCATGGTGACTTGAGATCCTGCGTAGGAGCAGAAGTTGGTAAGGTGCAGATGGCTGTACTTGTCCATTGCTTAGTCACAAAGTACAGGTGGGAAGTGATTGGAGGAAAAATAGTCCGAAATCCTGGTTGCACATCCGGATACAGCAGAAAGATACAAGGAACAGCAAACAGCATATAA

Protein Analysis

127

Amino Acids

13.88

Weight (kDa)

10.08

Isoelectric Point (pI)

26.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 338
AclWI GGATC 1 cut(s) 213
AfaI GTAC 4 cut(s) 87, 104, 261, 287
AjnI CCWGG 2 cut(s) 55, 325
AlwI GGATC 1 cut(s) 213
Aor13HI TCCGGA 1 cut(s) 338
AoxI GGCC 1 cut(s) 18
AsuHPI GGTGA 1 cut(s) 221
BbsI GAAGAC 1 cut(s) 101
BccI CCATC 2 cut(s) 29, 247
BciT130I CCWGG 2 cut(s) 57, 327
BciVI GTATCC 1 cut(s) 335
BfuI GTATCC 1 cut(s) 335
BmcAI AGTACT 1 cut(s) 104
Bme1390I CCNGG 2 cut(s) 57, 327
BmrFI CCNGG 2 cut(s) 57, 327
BmsI GCATC 2 cut(s) 69, 191
BpiI GAAGAC 1 cut(s) 101
BpuEI CTTGAG 1 cut(s) 235
BsaWI WCCGGW 1 cut(s) 338
BsaXI ACNNNNNCTCC 2 cut(s) 222, 252
Bse1I ACTGG 1 cut(s) 45
Bse3DI GCAATG 2 cut(s) 11, 268
BseAI TCCGGA 1 cut(s) 338
BseBI CCWGG 2 cut(s) 57, 327
BseGI GGATG 1 cut(s) 335
BseMI GCAATG 2 cut(s) 11, 268
BseNI ACTGG 1 cut(s) 45
BsgI GTGCAG 1 cut(s) 269
BshFI GGCC 1 cut(s) 20
BsiSI CCGG 1 cut(s) 339
BsnI GGCC 1 cut(s) 20
Bsp13I TCCGGA 1 cut(s) 338
Bsp143I GATC 1 cut(s) 218
BspANI GGCC 1 cut(s) 20
BspEI TCCGGA 1 cut(s) 338
BspPI GGATC 1 cut(s) 213
BsrDI GCAATG 2 cut(s) 11, 268
BsrI ACTGG 1 cut(s) 45
BssMI GATC 1 cut(s) 218
Bst2UI CCWGG 2 cut(s) 57, 327
Bst4CI ACNGT 3 cut(s) 34, 90, 107
BstC8I GCNNGC 1 cut(s) 18
BstDEI CTNAG 1 cut(s) 274
BstF5I GGATG 1 cut(s) 335
BstKTI GATC 1 cut(s) 221
BstMBI GATC 1 cut(s) 218
BstMWI GCNNNNNNNGC 1 cut(s) 66
BstNI CCWGG 2 cut(s) 57, 327
BstSCI CCNGG 2 cut(s) 55, 325
BstV2I GAAGAC 1 cut(s) 101
BstX2I RGATCY 1 cut(s) 218
BstYI RGATCY 1 cut(s) 218
BsuI GTATCC 1 cut(s) 335
BsuRI GGCC 1 cut(s) 20
BtsCI GGATG 1 cut(s) 335
Cac8I GCNNGC 1 cut(s) 18
Csp6I GTAC 4 cut(s) 86, 103, 260, 286
CviAII CATG 1 cut(s) 206
CviJI RGCY 3 cut(s) 20, 200, 257
CviKI_1 RGCY 3 cut(s) 20, 200, 257
CviQI GTAC 4 cut(s) 86, 103, 260, 286
DdeI CTNAG 1 cut(s) 274
DpnI GATC 1 cut(s) 220
DpnII GATC 1 cut(s) 218
EcoRII CCWGG 2 cut(s) 55, 325
FaeI CATG 1 cut(s) 209
FaiI YATR 4 cut(s) 197, 207, 377, 379
FatI CATG 1 cut(s) 205
FokI GGATG 1 cut(s) 322
HaeIII GGCC 1 cut(s) 20
HapII CCGG 1 cut(s) 339
Hin1II CATG 1 cut(s) 209
HpaII CCGG 1 cut(s) 339
HphI GGTGA 1 cut(s) 221
Hpy188I TCNGA 2 cut(s) 143, 320
Hpy188III TCNNGA 1 cut(s) 339
HpyCH4III ACNGT 3 cut(s) 34, 90, 107
HpyCH4V TGCA 4 cut(s) 16, 182, 250, 333
HpyF10VI GCNNNNNNNGC 1 cut(s) 66
HpyF3I CTNAG 1 cut(s) 274
Hsp92II CATG 1 cut(s) 209
Kpn2I TCCGGA 1 cut(s) 338
Kzo9I GATC 1 cut(s) 218
LmnI GCTCC 1 cut(s) 230
LweI GCATC 2 cut(s) 69, 191
MaeIII GTNAC 2 cut(s) 209, 277
MalI GATC 1 cut(s) 220
MboI GATC 1 cut(s) 218
MboII GAAGA 1 cut(s) 101
MflI RGATCY 1 cut(s) 218
MluCI AATT 1 cut(s) 121
MnlI CCTC 1 cut(s) 299
MroI TCCGGA 1 cut(s) 338
MseI TTAA 2 cut(s) 92, 134
MspI CCGG 1 cut(s) 339
MspR9I CCNGG 2 cut(s) 57, 327
MvaI CCWGG 2 cut(s) 57, 327
MwoI GCNNNNNNNGC 1 cut(s) 66
NdeII GATC 1 cut(s) 218
NlaIII CATG 1 cut(s) 209
NmuCI GTSAC 2 cut(s) 209, 277
Psp6I CCWGG 2 cut(s) 55, 325
PspGI CCWGG 2 cut(s) 55, 325
PsuI RGATCY 1 cut(s) 218
RsaI GTAC 4 cut(s) 87, 104, 261, 287
RsaNI GTAC 4 cut(s) 86, 103, 260, 286
SaqAI TTAA 2 cut(s) 92, 134
Sau3AI GATC 1 cut(s) 218
ScaI AGTACT 1 cut(s) 104
ScrFI CCNGG 2 cut(s) 57, 327
SetI ASST 3 cut(s) 154, 249, 293
SfaNI GCATC 2 cut(s) 69, 191
SmlI CTYRAG 1 cut(s) 214
SmoI CTYRAG 1 cut(s) 214
Sse9I AATT 1 cut(s) 121
StyD4I CCNGG 2 cut(s) 55, 325
TaaI ACNGT 3 cut(s) 34, 90, 107
TaqI TCGA 1 cut(s) 127
TasI AATT 1 cut(s) 121
TatI WGTACW 4 cut(s) 85, 102, 259, 285
Tru1I TTAA 2 cut(s) 92, 134
Tru9I TTAA 2 cut(s) 92, 134
TseFI GTSAC 2 cut(s) 209, 277
Tsp45I GTSAC 2 cut(s) 209, 277
TspDTI ATGAA 2 cut(s) 42, 194
ZrmI AGTACT 1 cut(s) 104
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.