F-box FBD LRR-repeat protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g25150 FvH4_5g01320 FvH4_5g01330 FvH4_5g09560 FvH4_5g09560 FvH4_5g09560 FvH4_5g09560 FvH4_5g09560 FvH4_5g09560 |
| rosa_chinensis | RchiOBHm_Chr5g0049261 RchiOBHm_Chr7g0188631 RchiOBHm_Chr7g0199601 |
| rosa_laevigata | RLG00000003784 RLG00000004676 RLG00000034607 |
| rosa_multiflora | Rmu_co8228169.1_g000001 Rmu_sc0005358.1_g000008 Rmu_sc0009191.1_g000012 Rmu_sc0018006.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00032400 Rroxscaffold_3G00256570 Rroxscaffold_3G00256590 Rroxscaffold_3G00266180 |
| rosa_rugosa | Rorug05G0246700 Rorug06G0491900 Rorug07G0055400 |
| rosa_samantha | Rh5BG334700 Rh5DG346800 Rh7CG099700 Rh7CG189900 Rh7CG190000 Rh7DG098800 |
| rosa_wichuraiana | Rw7G008360 Rw7G015840 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 922 |
| Acc36I | ACCTGC | 1 cut(s) | 922 |
| AccB1I | GGYRCC | 2 cut(s) | 797, 1123 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 111, 406 |
| AccI | GTMKAC | 4 cut(s) | 297, 856, 1065, 1248 |
| AccII | CGCG | 2 cut(s) | 139, 1311 |
| AciI | CCGC | 3 cut(s) | 83, 137, 1493 |
| AclWI | GGATC | 2 cut(s) | 1565, 1578 |
| AcsI | RAATTY | 7 cut(s) | 353, 614, 933, 1077, 1159, 1360, 1597 |
| AcuI | CTGAAG | 5 cut(s) | 218, 448, 1080, 1263, 1440 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 111, 406, 1003, 1186 |
| AflII | CTTAAG | 1 cut(s) | 836 |
| AjnI | CCWGG | 1 cut(s) | 34 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 393, 425, 513, 545 |
| Alw21I | GWGCWC | 1 cut(s) | 1094 |
| Alw26I | GTCTC | 4 cut(s) | 146, 369, 547, 1150 |
| AlwI | GGATC | 2 cut(s) | 1565, 1578 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 111, 1589, 1652 |
| AoxI | GGCC | 1 cut(s) | 241 |
| ApeKI | GCWGC | 3 cut(s) | 284, 814, 887 |
| ApoI | RAATTY | 7 cut(s) | 353, 614, 933, 1077, 1159, 1360, 1597 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 82, 114, 1328, 1360 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 338 |
| AspS9I | GGNCC | 2 cut(s) | 242, 1525 |
| AsuC2I | CCSGG | 1 cut(s) | 359 |
| AvaII | GGWCC | 1 cut(s) | 1525 |
| BamHI | GGATCC | 1 cut(s) | 1570 |
| BanI | GGYRCC | 2 cut(s) | 797, 1123 |
| BauI | CACGAG | 1 cut(s) | 143 |
| BbsI | GAAGAC | 2 cut(s) | 200, 473 |
| Bbv12I | GWGCWC | 1 cut(s) | 1094 |
| BbvI | GCAGC | 3 cut(s) | 271, 801, 874 |
| BccI | CCATC | 2 cut(s) | 297, 594 |
| BceAI | ACGGC | 1 cut(s) | 485 |
| BciT130I | CCWGG | 1 cut(s) | 36 |
| BclI | TGATCA | 1 cut(s) | 154 |
| BcnI | CCSGG | 1 cut(s) | 359 |
| BcoDI | GTCTC | 4 cut(s) | 146, 369, 547, 1150 |
| BfaI | CTAG | 4 cut(s) | 288, 705, 714, 1112 |
| BfmI | CTRYAG | 3 cut(s) | 849, 960, 1295 |
| BfrI | CTTAAG | 1 cut(s) | 836 |
| BfuAI | ACCTGC | 1 cut(s) | 922 |
| BisI | GCNGC | 3 cut(s) | 285, 815, 888 |
| BlsI | GCNGC | 3 cut(s) | 286, 816, 889 |
| Bme1390I | CCNGG | 2 cut(s) | 36, 359 |
| Bme18I | GGWCC | 1 cut(s) | 1525 |
| BmgT120I | GGNCC | 2 cut(s) | 242, 1525 |
| BmiI | GGNNCC | 4 cut(s) | 244, 799, 1125, 1572 |
| BmrFI | CCNGG | 2 cut(s) | 36, 359 |
| BmrI | ACTGGG | 1 cut(s) | 1195 |
| BmsI | GCATC | 5 cut(s) | 241, 502, 589, 1162, 1540 |
| BmuI | ACTGGG | 1 cut(s) | 1195 |
| BpiI | GAAGAC | 2 cut(s) | 200, 473 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 313, 345, 544, 576 |
| BpmI | CTGGAG | 2 cut(s) | 133, 987 |
| BpuEI | CTTGAG | 6 cut(s) | 509, 569, 575, 710, 1484, 1655 |
| BpuMI | CCSGG | 1 cut(s) | 359 |
| Bsa29I | ATCGAT | 1 cut(s) | 597 |
| BsaI | GGTCTC | 1 cut(s) | 369 |
| BsaJI | CCNNGG | 3 cut(s) | 358, 801, 1340 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 111, 406, 1003, 1186 |
| Bse1I | ACTGG | 3 cut(s) | 116, 1190, 1528 |
| BseBI | CCWGG | 1 cut(s) | 36 |
| BseCI | ATCGAT | 1 cut(s) | 597 |
| BseDI | CCNNGG | 3 cut(s) | 358, 801, 1340 |
| BseGI | GGATG | 4 cut(s) | 12, 649, 1476, 1555 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 111, 406, 1003, 1186 |
| BseMII | CTCAG | 2 cut(s) | 893, 1161 |
| BseNI | ACTGG | 3 cut(s) | 116, 1190, 1528 |
| BseRI | GAGGAG | 3 cut(s) | 202, 824, 890 |
| BseXI | GCAGC | 3 cut(s) | 271, 801, 874 |
| BsgI | GTGCAG | 1 cut(s) | 1409 |
| Bsh1236I | CGCG | 2 cut(s) | 139, 1311 |
| BshFI | GGCC | 1 cut(s) | 243 |
| BshNI | GGYRCC | 2 cut(s) | 797, 1123 |
| BshVI | ATCGAT | 1 cut(s) | 597 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1094 |
| BsiSI | CCGG | 1 cut(s) | 358 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 111, 406, 1003, 1186 |
| BsmAI | GTCTC | 4 cut(s) | 146, 369, 547, 1150 |
| BsmBI | CGTCTC | 1 cut(s) | 146 |
| BsmI | GAATGC | 3 cut(s) | 1007, 1190, 1401 |
| BsnI | GGCC | 1 cut(s) | 243 |
| Bso31I | GGTCTC | 1 cut(s) | 369 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1094 |
| Bsp143I | GATC | 9 cut(s) | 72, 154, 217, 237, 594, 1135, 1312, 1570, 1630 |
| Bsp68I | TCGCGA | 1 cut(s) | 1311 |
| BspACI | CCGC | 3 cut(s) | 83, 137, 1493 |
| BspANI | GGCC | 1 cut(s) | 243 |
| BspCNI | CTCAG | 2 cut(s) | 894, 1160 |
| BspDI | ATCGAT | 1 cut(s) | 597 |
| BspFNI | CGCG | 2 cut(s) | 139, 1311 |
| BspLI | GGNNCC | 4 cut(s) | 244, 799, 1125, 1572 |
| BspMI | ACCTGC | 1 cut(s) | 922 |
| BspPI | GGATC | 2 cut(s) | 1565, 1578 |
| BspQI | GCTCTTC | 1 cut(s) | 1290 |
| BspT107I | GGYRCC | 2 cut(s) | 797, 1123 |
| BspTI | CTTAAG | 1 cut(s) | 836 |
| BspTNI | GGTCTC | 1 cut(s) | 369 |
| BsrI | ACTGG | 3 cut(s) | 116, 1190, 1528 |
| BssECI | CCNNGG | 3 cut(s) | 358, 801, 1340 |
| BssMI | GATC | 9 cut(s) | 72, 154, 217, 237, 594, 1135, 1312, 1570, 1630 |
| BssNAI | GTATAC | 1 cut(s) | 857 |
| BssSI | CACGAG | 1 cut(s) | 143 |
| BssT1I | CCWWGG | 1 cut(s) | 1340 |
| Bst1107I | GTATAC | 1 cut(s) | 857 |
| Bst2BI | CACGAG | 1 cut(s) | 143 |
| Bst2UI | CCWGG | 1 cut(s) | 36 |
| Bst6I | CTCTTC | 2 cut(s) | 470, 1290 |
| BstAFI | CTTAAG | 1 cut(s) | 836 |
| BstC8I | GCNNGC | 2 cut(s) | 348, 1309 |
| BstDEI | CTNAG | 3 cut(s) | 902, 1147, 1577 |
| BstF5I | GGATG | 4 cut(s) | 12, 649, 1476, 1555 |
| BstFNI | CGCG | 2 cut(s) | 139, 1311 |
| BstKTI | GATC | 9 cut(s) | 75, 157, 220, 240, 597, 1138, 1315, 1573, 1633 |
| BstMAI | GTCTC | 4 cut(s) | 146, 369, 547, 1150 |
| BstMBI | GATC | 9 cut(s) | 72, 154, 217, 237, 594, 1135, 1312, 1570, 1630 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 512, 714, 797, 971 |
| BstNI | CCWGG | 1 cut(s) | 36 |
| BstSCI | CCNGG | 2 cut(s) | 34, 357 |
| BstSFI | CTRYAG | 3 cut(s) | 849, 960, 1295 |
| BstUI | CGCG | 2 cut(s) | 139, 1311 |
| BstV1I | GCAGC | 3 cut(s) | 271, 801, 874 |
| BstV2I | GAAGAC | 2 cut(s) | 200, 473 |
| BstX2I | RGATCY | 1 cut(s) | 1570 |
| BstYI | RGATCY | 1 cut(s) | 1570 |
| BstZ17I | GTATAC | 1 cut(s) | 857 |
| Bsu15I | ATCGAT | 1 cut(s) | 597 |
| BsuRI | GGCC | 1 cut(s) | 243 |
| BsuTUI | ATCGAT | 1 cut(s) | 597 |
| BtsCI | GGATG | 4 cut(s) | 12, 649, 1476, 1555 |
| BtsIMutI | CAGTG | 1 cut(s) | 1551 |
| BtuMI | TCGCGA | 1 cut(s) | 1311 |
| BveI | ACCTGC | 1 cut(s) | 922 |
| Cac8I | GCNNGC | 2 cut(s) | 348, 1309 |
| CaiI | CAGNNNCTG | 3 cut(s) | 111, 1589, 1652 |
| Cfr13I | GGNCC | 2 cut(s) | 242, 1525 |
| ClaI | ATCGAT | 1 cut(s) | 597 |
| CseI | GACGC | 1 cut(s) | 128 |
| CsiI | ACCWGGT | 1 cut(s) | 34 |
| CviAII | CATG | 2 cut(s) | 629, 1406 |
| DdeI | CTNAG | 3 cut(s) | 902, 1147, 1577 |
| DpnI | GATC | 9 cut(s) | 74, 156, 219, 239, 596, 1137, 1314, 1572, 1632 |
| DpnII | GATC | 9 cut(s) | 72, 154, 217, 237, 594, 1135, 1312, 1570, 1630 |
| Eam1104I | CTCTTC | 2 cut(s) | 470, 1290 |
| EarI | CTCTTC | 2 cut(s) | 470, 1290 |
| Eco130I | CCWWGG | 1 cut(s) | 1340 |
| Eco31I | GGTCTC | 1 cut(s) | 369 |
| Eco47I | GGWCC | 1 cut(s) | 1525 |
| Eco57I | CTGAAG | 5 cut(s) | 218, 448, 1080, 1263, 1440 |
| EcoRI | GAATTC | 2 cut(s) | 1159, 1597 |
| EcoRII | CCWGG | 1 cut(s) | 34 |
| EcoT14I | CCWWGG | 1 cut(s) | 1340 |
| ErhI | CCWWGG | 1 cut(s) | 1340 |
| Esp3I | CGTCTC | 1 cut(s) | 146 |
| FaeI | CATG | 2 cut(s) | 632, 1409 |
| FatI | CATG | 2 cut(s) | 628, 1405 |
| FbaI | TGATCA | 1 cut(s) | 154 |
| FblI | GTMKAC | 4 cut(s) | 297, 856, 1065, 1248 |
| Fnu4HI | GCNGC | 3 cut(s) | 285, 815, 888 |
| FokI | GGATG | 4 cut(s) | 19, 656, 1483, 1562 |
| Fsp4HI | GCNGC | 3 cut(s) | 285, 815, 888 |
| FspBI | CTAG | 4 cut(s) | 288, 705, 714, 1112 |
| GluI | GCNGC | 3 cut(s) | 285, 815, 888 |
| GsuI | CTGGAG | 2 cut(s) | 133, 987 |
| HaeIII | GGCC | 1 cut(s) | 243 |
| HapII | CCGG | 1 cut(s) | 358 |
| HgaI | GACGC | 1 cut(s) | 128 |
| Hin1II | CATG | 2 cut(s) | 632, 1409 |
| HincII | GTYRAC | 3 cut(s) | 298, 655, 1395 |
| HindII | GTYRAC | 3 cut(s) | 298, 655, 1395 |
| HindIII | AAGCTT | 1 cut(s) | 699 |
| HpaI | GTTAAC | 1 cut(s) | 1395 |
| HpaII | CCGG | 1 cut(s) | 358 |
| Hpy166II | GTNNAC | 9 cut(s) | 298, 342, 655, 857, 943, 1066, 1249, 1395, 1454 |
| Hpy188III | TCNNGA | 9 cut(s) | 366, 466, 488, 592, 1103, 1149, 1289, 1310, 1634 |
| Hpy8I | GTNNAC | 9 cut(s) | 298, 342, 655, 857, 943, 1066, 1249, 1395, 1454 |
| Hpy99I | CGWCG | 1 cut(s) | 385 |
| HpyAV | CCTTC | 4 cut(s) | 456, 944, 1051, 1234 |
| HpyCH4IV | ACGT | 1 cut(s) | 200 |
| HpyCH4V | TGCA | 6 cut(s) | 120, 170, 350, 602, 1390, 1553 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 512, 714, 797, 971 |
| HpyF3I | CTNAG | 3 cut(s) | 902, 1147, 1577 |
| HpySE526I | ACGT | 1 cut(s) | 200 |
| Hsp92II | CATG | 2 cut(s) | 632, 1409 |
| Ksp22I | TGATCA | 1 cut(s) | 154 |
| KspAI | GTTAAC | 1 cut(s) | 1395 |
| Kzo9I | GATC | 9 cut(s) | 72, 154, 217, 237, 594, 1135, 1312, 1570, 1630 |
| LguI | GCTCTTC | 1 cut(s) | 1290 |
| LmnI | GCTCC | 1 cut(s) | 811 |
| Lsp1109I | GCAGC | 3 cut(s) | 271, 801, 874 |
| LweI | GCATC | 5 cut(s) | 241, 502, 589, 1162, 1540 |
| MabI | ACCWGGT | 1 cut(s) | 34 |
| MaeI | CTAG | 4 cut(s) | 288, 705, 714, 1112 |
| MaeII | ACGT | 1 cut(s) | 200 |
| MaeIII | GTNAC | 3 cut(s) | 533, 1033, 1216 |
| MalI | GATC | 9 cut(s) | 74, 156, 219, 239, 596, 1137, 1314, 1572, 1632 |
| MboI | GATC | 9 cut(s) | 72, 154, 217, 237, 594, 1135, 1312, 1570, 1630 |
| MfeI | CAATTG | 3 cut(s) | 427, 684, 979 |
| MflI | RGATCY | 1 cut(s) | 1570 |
| MhlI | GDGCHC | 1 cut(s) | 1094 |
| MlyI | GAGTC | 4 cut(s) | 487, 553, 1419, 1646 |
| MmeI | TCCRAC | 1 cut(s) | 1045 |
| MroXI | GAANNNNTTC | 1 cut(s) | 338 |
| MseI | TTAA | 8 cut(s) | 572, 648, 665, 837, 1053, 1257, 1271, 1394 |
| MslI | CAYNNNNRTG | 1 cut(s) | 829 |
| MspA1I | CMGCKG | 1 cut(s) | 965 |
| MspCI | CTTAAG | 1 cut(s) | 836 |
| MspI | CCGG | 1 cut(s) | 358 |
| MspR9I | CCNGG | 2 cut(s) | 36, 359 |
| MunI | CAATTG | 3 cut(s) | 427, 684, 979 |
| Mva1269I | GAATGC | 3 cut(s) | 1007, 1190, 1401 |
| MvaI | CCWGG | 1 cut(s) | 36 |
| MvnI | CGCG | 2 cut(s) | 139, 1311 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 512, 714, 797, 971 |
| NciI | CCSGG | 1 cut(s) | 359 |
| NdeII | GATC | 9 cut(s) | 72, 154, 217, 237, 594, 1135, 1312, 1570, 1630 |
| NlaIII | CATG | 2 cut(s) | 632, 1409 |
| NlaIV | GGNNCC | 4 cut(s) | 244, 799, 1125, 1572 |
| NmeAIII | GCCGAG | 1 cut(s) | 782 |
| NmuCI | GTSAC | 2 cut(s) | 1033, 1216 |
| NruI | TCGCGA | 1 cut(s) | 1311 |
| PaqCI | CACCTGC | 1 cut(s) | 922 |
| PciSI | GCTCTTC | 1 cut(s) | 1290 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 68 |
| PctI | GAATGC | 3 cut(s) | 1007, 1190, 1401 |
| PdmI | GAANNNNTTC | 1 cut(s) | 338 |
| PfeI | GAWTC | 6 cut(s) | 55, 307, 1586, 1610, 1643, 1649 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 111, 406 |
| PkrI | GCNGC | 3 cut(s) | 286, 816, 889 |
| PleI | GAGTC | 4 cut(s) | 486, 553, 1418, 1645 |
| PpsI | GAGTC | 4 cut(s) | 486, 553, 1418, 1645 |
| Psp6I | CCWGG | 1 cut(s) | 34 |
| PspGI | CCWGG | 1 cut(s) | 34 |
| PspN4I | GGNNCC | 4 cut(s) | 244, 799, 1125, 1572 |
| PspPI | GGNCC | 2 cut(s) | 242, 1525 |
| PstNI | CAGNNNCTG | 3 cut(s) | 111, 1589, 1652 |
| PsuI | RGATCY | 1 cut(s) | 1570 |
| PvuII | CAGCTG | 1 cut(s) | 965 |
| RruI | TCGCGA | 1 cut(s) | 1311 |
| RseI | CAYNNNNRTG | 1 cut(s) | 829 |
| SalI | GTCGAC | 1 cut(s) | 296 |
| SapI | GCTCTTC | 1 cut(s) | 1290 |
| SaqAI | TTAA | 8 cut(s) | 572, 648, 665, 837, 1053, 1257, 1271, 1394 |
| SatI | GCNGC | 3 cut(s) | 285, 815, 888 |
| Sau3AI | GATC | 9 cut(s) | 72, 154, 217, 237, 594, 1135, 1312, 1570, 1630 |
| Sau96I | GGNCC | 2 cut(s) | 242, 1525 |
| SchI | GAGTC | 4 cut(s) | 487, 553, 1419, 1646 |
| ScrFI | CCNGG | 2 cut(s) | 36, 359 |
| SduI | GDGCHC | 1 cut(s) | 1094 |
| SexAI | ACCWGGT | 1 cut(s) | 34 |
| SfaNI | GCATC | 5 cut(s) | 241, 502, 589, 1162, 1540 |
| SfcI | CTRYAG | 3 cut(s) | 849, 960, 1295 |
| SinI | GGWCC | 1 cut(s) | 1525 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 829 |
| SmlI | CTYRAG | 7 cut(s) | 488, 548, 590, 725, 836, 1463, 1634 |
| SmoI | CTYRAG | 7 cut(s) | 488, 548, 590, 725, 836, 1463, 1634 |
| SsiI | CCGC | 3 cut(s) | 83, 137, 1493 |
| SspMI | CTAG | 4 cut(s) | 288, 705, 714, 1112 |
| StyD4I | CCNGG | 2 cut(s) | 34, 357 |
| StyI | CCWWGG | 1 cut(s) | 1340 |
| TaiI | ACGT | 1 cut(s) | 203 |
| TaqI | TCGA | 3 cut(s) | 297, 367, 597 |
| TfiI | GAWTC | 6 cut(s) | 55, 307, 1586, 1610, 1643, 1649 |
| Tru1I | TTAA | 8 cut(s) | 572, 648, 665, 837, 1053, 1257, 1271, 1394 |
| Tru9I | TTAA | 8 cut(s) | 572, 648, 665, 837, 1053, 1257, 1271, 1394 |
| TscAI | CASTG | 1 cut(s) | 1551 |
| TseFI | GTSAC | 2 cut(s) | 1033, 1216 |
| TseI | GCWGC | 3 cut(s) | 284, 814, 887 |
| Tsp45I | GTSAC | 2 cut(s) | 1033, 1216 |
| TspDTI | ATGAA | 8 cut(s) | 302, 401, 1005, 1043, 1060, 1243, 1394, 1420 |
| TspRI | CASTG | 1 cut(s) | 1551 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 111, 406 |
| Vha464I | CTTAAG | 1 cut(s) | 836 |
| VpaK11BI | GGWCC | 1 cut(s) | 1525 |
| XapI | RAATTY | 7 cut(s) | 353, 614, 933, 1077, 1159, 1360, 1597 |
| XmiI | GTMKAC | 4 cut(s) | 297, 856, 1065, 1248 |
| XmnI | GAANNNNTTC | 1 cut(s) | 338 |
| XspI | CTAG | 4 cut(s) | 288, 705, 714, 1112 |