FvH4_5g20210

serine threonine-protein kinase cdc7

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0002088
Physical Location & Seq
Forward (+)
11927981 .. 11933688
5708 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g20210.t2

Sequence Viewer

Length: 2805 bp
ATGGCAACTACCCCACTCGACTCAGCCCTCACCGCCTCAACCATCTCCGACTCCGACAAGGCCTGGCACCTCCTCGCCCTCCTCTTATCTCTCGGCCGCCGGACCCGCCCCTTCGAGCTCGCCGCTCGATGCACGGCGTTCCCCGCAACCGCTCATTTGGTCCAACGCCTTTGCTCCGTCGCTAATTCGCCAATCTCCTTGTCCGAAGATCTCCACGTCACGCCGTCTCTGTTCGCCGTAACCGCTCTGGCGGAGTCCGTCTCTAGTTCCTGCGGCGACGGCGCACTGAGAACGAACTTAGGGAAGAGAAAACGCCTCGTTTTGGATTGCGGATTTGTGACCTCGGCTAAACGGAGATTGATTGTGGATTTTGAAAACGTAAATGACGATAATGGAGCGCGGAAATCAGTCATATGTATTCCTCCGAAGATACATTTTCATATGACTGACTATCTCAGCAGAAGAATAAGTATGCTACCAAGTAATGTGGCTGTGGGGTTGGATAAATCGATCTTCAGTTCTCCATTATTTATTGAAGATAGTGCTGGGCCATCTAGTTGTGGAGTGAAGAACATTGGGAATGTAGAAGATCAAATGGAGACCGATATAACTCTGCAAAGGAATGTTAATAAAACAGTTATGGCCTGTGTAGATGATTTAGAGCCAACTGTTCCAACAGTGTCAGAAGATTTAGTACTTTATGAGATAGATAGCTTGGCCAAATCTTACCTAGAGAAAAGTAAAAAAACCATTACGTCACCAGTGCTGGATGAGAATGGTAGTGTTAATTGCAAAGTTGCAAATTGTTCGGTCCTTGAAGATGAAAGAGTTGTGGGAGATTCGGAGGAAGAATTGTTAGTAGATCCACACAACCCTAATGGAGAAGCAGAAAGTCTATATCAGCCATACACTGCTGTTTCTGATAAGCTGCCTGGAACTGAAATCAGAAAATCGAATAAGGAGGATTTCGAAGTTACAAAACATGTTAGTAAAAGTCTAATGACAAGAAATGAGGCCCAGAACACATGTCCAGCCAAGGAATTCTATGTTCCTCAAAAGCAGTTGCTGAAGTCCTCTGCAACAATTAAGGTCATTCACACGGATAAGATCTCTTCAAGACTGCAATCTCTATACGGCTGTAATTTAGAGCAGGATCAGGCCGTTGCCACTTCCAAAGTGAGCCTTCACCATAAATTGGATCAGAAGACAAATAGCATGGTACACAAATCAAAACAGAATTGTGGTGACATGCATATTAATGAAAGAAAAAGACGATACAAATCTATTTCTTCTAAGGATCAACCAGAGAAAAAAGAATTTCCAAATTTTGATTCTTATATGGTAGAAGAAGAAGAAGGTTCAGGTGGTTATGGTACTGTTTACAGGGCGAGGAGTAAGAATGACAGGACAAGGGTTGCCATTAAGTGTCCACATGCTAATGCTCATAAGAGCCATGTTAACAACGAGTTGAGAATGCTGGAAAGGTTTGGGGGAAGAAATTTTGTGATCAAATATGAAGGCTGTATCAAGAATGGGAATTCAAGTTGCTTTGTATTACAGCATGTTGAGCATGATAGACCAGAGGTTTTAAAGAGAGAGATAGATGTCCGTGAGCTCCGGTGGTATGGATATTGCTTGTTTAGAGCACTTGCTAGCCTTCATAAGCAGGGAATAGTACATAGAGATATTAAACCCGGCAATTTCCTTTTCTCTCGTAAGGCCAACAAGGGCTACCTAATTGATTTCAATCTATCCATGGACTTGCATCAGAAGTATGGAAATATTAGTAAGTCAAGAGGGGGATTTGATGTAAACAGTGATGAGAAGCTTATGACTGCAAAAAGTATACCTCCAATCACACTTAGGAAGTTGCCAAGTGGTAAATCTTTACTAACAGCCAATGGAGAGACCTCAAAAGGTTTGAAATCCACTTTTGATATGAAGGATCTAAAGAAAATGGCTTTCAGCCAAATGAAGGTAAATAAAGATTCGGGTAGTAGAAAGGTAATCAAAAGTCAGGGTGCAGATGGCTCAGGCATAACGTCAGTAAAGGATGTTACAAGCACCAGGACTCTGTCGGCTGAAAGGATGAGAGAACCTTTGCCATGCCAAGGAAGGAAAGAATTGATCAATCTAGTACAGGAAGCAAGGGAAAGTACAAATAATGAGGCGTCAAGTATTTCAGCTCTTATGAGAAAGAGGGTTCCTGCCCCTCCCGTAAATGTCGATGGCAAGTTTTTCCATGTCACTCCAATGCCTATGCACTCAACTTCCAATGGTTTTGGTGGTCCATGCTTGATAAGAAGCAGAGGTTCTGGAAAACATAAAGAAGGCCCTTGCGCTGGGACTAAAGGCTTCAGGGCTCCAGAGGTTCTCTTAAGATCTCCTCATCAGGGCCCCAAAGTTGATATCTGGTCTGCCGGAGTCACGTTACTATACTTGTTGATTGGCAGAACACCTTTCCTTGGCGAACCTGAACTGAACATCAAGGATATTGCAAAGCTGAGAGGCAGTGAAGACTTATGGGAAGTCGCCAAGCTACACGACCGCGAATCCTCATTTCCAGCGGAGCTCTACAGTACAGATTGTTTGCCCTCTATTAAAGTAAAGGATTGGTGCAGAAAGAATACAAGGAGACCAGACTTCTTTGAGGAAATCCCAAGACCACTTTTCGATCTTGTGGATAAATGCTTAATGGTGAATCCTAGGGTTAGAATAAGTGCAGAGGAAGCGCTTAAACATGAGTTTTTCGCTCCATGCCATGAAGAACTGAGAAAGCACAAGCTTCAGAGGTTGGTATCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000082 GO:0000278 GO:0000724 GO:0000725 GO:0000727 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005819 GO:0005856 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006270 GO:0006275 GO:0006281 GO:0006302 GO:0006310 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006897 GO:0006909 GO:0006950 GO:0006974 GO:0007049 GO:0007346 GO:0008150 GO:0008152 GO:0008284 GO:0008360 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010389 GO:0010556 GO:0010557 GO:0010564 GO:0010571 GO:0010604 GO:0010948 GO:0010971 GO:0015630 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019219 GO:0019222 GO:0019538 GO:0022402 GO:0022603 GO:0022604 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0033262 GO:0033554 GO:0034641 GO:0034645 GO:0036211 GO:0042127 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044421 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044446 GO:0044464 GO:0044770 GO:0044772 GO:0044843 GO:0045171 GO:0045740 GO:0045786 GO:0045787 GO:0045931 GO:0045935 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051054 GO:0051128 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065008 GO:0070013 GO:0070316 GO:0070317 GO:0071704 GO:0072686 GO:0080090 GO:0090068 GO:0090304 GO:0090329 GO:0098657 GO:0140096 GO:1901360 GO:1901564 GO:1901576 GO:1901987 GO:1901989 GO:1901990 GO:1901992 GO:1902749 GO:1902751 GO:1903047 GO:2000105 GO:2000112
KEGG Pathways
Metabolic & Signaling
ko04110 ko04111 ko04113 map04110 map04111 map04113
Pfam Domains
Protein Families
Pkinase

Protein Analysis

935

Amino Acids

104.22

Weight (kDa)

9.03

Isoelectric Point (pI)

45.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 300 - 445 1.4e-23 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 303 - 445 5.9e-11 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 633 - 676 4.7e-09 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 66
AccB7I CCANNNNNTGG 1 cut(s) 1195
AccBSI CCGCTC 3 cut(s) 125, 152, 245
AccI GTMKAC 1 cut(s) 1846
AccII CGCG 2 cut(s) 400, 2550
AclWI GGATC 5 cut(s) 857, 1161, 1206, 1305, 1953
AcoI YGGCCR 2 cut(s) 94, 717
AcsI RAATTY 5 cut(s) 1040, 1316, 1324, 1498, 1537
AcuI CTGAAG 4 cut(s) 499, 1088, 2341, 2771
AcyI GRCGYC 1 cut(s) 2171
AfaI GTAC 7 cut(s) 696, 1221, 1375, 1677, 2139, 2158, 2581
AfeI AGCGCT 1 cut(s) 2733
AfiI CCNNNNNNNGG 7 cut(s) 322, 1195, 1975, 2111, 2342, 2393, 2465
AflII CTTAAG 1 cut(s) 2377
AflIII ACRYGT 2 cut(s) 982, 1025
AgsI TTSAA 7 cut(s) 374, 536, 818, 1116, 1542, 1747, 1924
AjiI CACGTC 1 cut(s) 217
AjnI CCWGG 3 cut(s) 62, 931, 2066
AjuI GAANNNNNNNTTGG 2 cut(s) 1315, 1347
Alw21I GWGCWC 4 cut(s) 120, 1617, 1648, 2574
Alw26I GTCTC 5 cut(s) 231, 265, 593, 1901, 2629
AlwI GGATC 5 cut(s) 857, 1161, 1206, 1305, 1953
AlwNI CAGNNNCTG 1 cut(s) 1066
Aor51HI AGCGCT 1 cut(s) 2733
ApaI GGGCCC 1 cut(s) 2399
ApeKI GCWGC 1 cut(s) 928
ApoI RAATTY 5 cut(s) 1040, 1316, 1324, 1498, 1537
AseI ATTAAT 1 cut(s) 1257
AspA2I CCTAGG 1 cut(s) 2705
AspLEI GCGC 4 cut(s) 284, 400, 2342, 2734
AspS9I GGNCC 9 cut(s) 102, 160, 548, 811, 1015, 2288, 2333, 2395, 2396
AsuC2I CCSGG 1 cut(s) 1695
AsuHPI GGTGA 5 cut(s) 22, 750, 1178, 1256, 2710
AsuII TTCGAA 1 cut(s) 969
AsuNHI GCTAGC 1 cut(s) 1652
AvaII GGWCC 4 cut(s) 102, 160, 811, 2288
AvrII CCTAGG 1 cut(s) 2705
BaeGI GKGCMC 1 cut(s) 2399
BalI TGGCCA 1 cut(s) 719
BanI GGYRCC 1 cut(s) 66
BanII GRGCYC 5 cut(s) 120, 1617, 2365, 2399, 2574
BarI GAAGNNNNNNTAC 2 cut(s) 678, 710
BbsI GAAGAC 2 cut(s) 1211, 2523
Bbv12I GWGCWC 4 cut(s) 120, 1617, 1648, 2574
BbvI GCAGC 1 cut(s) 915
BccI CCATC 4 cut(s) 50, 559, 2021, 2222
BceAI ACGGC 6 cut(s) 150, 208, 221, 295, 1145, 1150
BcgI CGANNNNNNTGC 2 cut(s) 789, 823
BciT130I CCWGG 3 cut(s) 64, 933, 2068
BclI TGATCA 2 cut(s) 1506, 2127
BcnI CCSGG 1 cut(s) 1695
BcoDI GTCTC 5 cut(s) 231, 265, 593, 1901, 2629
BfaI CTAG 6 cut(s) 264, 555, 731, 1653, 2135, 2706
BfmI CTRYAG 1 cut(s) 2575
BfoI RGCGCY 1 cut(s) 2735
BfrI CTTAAG 1 cut(s) 2377
BglII AGATCT 3 cut(s) 208, 1107, 2381
BisI GCNGC 4 cut(s) 97, 123, 274, 929
BlnI CCTAGG 1 cut(s) 2705
BlsI GCNGC 4 cut(s) 98, 124, 275, 930
BmcAI AGTACT 1 cut(s) 696
Bme1390I CCNGG 4 cut(s) 64, 933, 1695, 2068
Bme18I GGWCC 4 cut(s) 102, 160, 811, 2288
BmgBI CACGTC 1 cut(s) 217
BmgT120I GGNCC 9 cut(s) 102, 160, 548, 811, 1015, 2288, 2333, 2395, 2396
BmiI GGNNCC 6 cut(s) 68, 104, 2205, 2364, 2397, 2398
BmrFI CCNGG 4 cut(s) 64, 933, 1695, 2068
BmsI GCATC 2 cut(s) 119, 1774
BmtI GCTAGC 1 cut(s) 1656
BpiI GAAGAC 2 cut(s) 1211, 2523
BplI GAGNNNNNCTC 2 cut(s) 245, 277
BpmI CTGGAG 1 cut(s) 2349
Bpu10I CCTNAGC 1 cut(s) 2032
Bpu14I TTCGAA 1 cut(s) 969
BpuMI CCSGG 1 cut(s) 1695
Bsa29I ATCGAT 1 cut(s) 509
BsaBI GATNNNNATC 2 cut(s) 1279, 1746
BsaHI GRCGYC 1 cut(s) 2171
BsaI GGTCTC 3 cut(s) 593, 1901, 2629
BsaJI CCNNGG 6 cut(s) 342, 1035, 1755, 2110, 2464, 2705
BsaWI WCCGGW 1 cut(s) 1617
Bsc4I CCNNNNNNNGG 7 cut(s) 322, 1195, 1975, 2111, 2342, 2393, 2465
Bse1I ACTGG 1 cut(s) 761
Bse8I GATNNNNATC 2 cut(s) 1279, 1746
BseBI CCWGG 3 cut(s) 64, 933, 2068
BseCI ATCGAT 1 cut(s) 509
BseDI CCNNGG 6 cut(s) 342, 1035, 1755, 2110, 2464, 2705
BseGI GGATG 3 cut(s) 775, 2059, 2094
BseJI GATNNNNATC 2 cut(s) 1279, 1746
BseLI CCNNNNNNNGG 7 cut(s) 322, 1195, 1975, 2111, 2342, 2393, 2465
BseMII CTCAG 6 cut(s) 36, 278, 469, 2046, 2495, 2762
BseNI ACTGG 1 cut(s) 761
BseRI GAGGAG 4 cut(s) 62, 71, 1405, 2376
BseSI GKGCMC 1 cut(s) 2399
BseX3I CGGCCG 1 cut(s) 94
BseXI GCAGC 1 cut(s) 915
BseYI CCCAGC 2 cut(s) 545, 2342
BsgI GTGCAG 3 cut(s) 2043, 2638, 2742
Bsh1236I CGCG 2 cut(s) 400, 2550
Bsh1285I CGRYCG 2 cut(s) 97, 2548
BshNI GGYRCC 1 cut(s) 66
BshVI ATCGAT 1 cut(s) 509
BsiEI CGRYCG 2 cut(s) 97, 2548
BsiHKAI GWGCWC 4 cut(s) 120, 1617, 1648, 2574
BsiSI CCGG 4 cut(s) 100, 1618, 1695, 2421
BslFI GGGAC 1 cut(s) 2359
BslI CCNNNNNNNGG 7 cut(s) 322, 1195, 1975, 2111, 2342, 2393, 2465
BsmAI GTCTC 5 cut(s) 231, 265, 593, 1901, 2629
BsmBI CGTCTC 2 cut(s) 231, 265
BsmFI GGGAC 1 cut(s) 2359
BsmI GAATGC 1 cut(s) 1479
Bso31I GGTCTC 3 cut(s) 593, 1901, 2629
Bsp119I TTCGAA 1 cut(s) 969
Bsp120I GGGCCC 1 cut(s) 2395
Bsp1286I GDGCHC 6 cut(s) 120, 1617, 1648, 2365, 2399, 2574
Bsp19I CCATGG 1 cut(s) 1755
BspCNI CTCAG 6 cut(s) 35, 279, 468, 2045, 2496, 2763
BspDI ATCGAT 1 cut(s) 509
BspFNI CGCG 2 cut(s) 400, 2550
BspLI GGNNCC 6 cut(s) 68, 104, 2205, 2364, 2397, 2398
BspOI GCTAGC 1 cut(s) 1656
BspPI GGATC 5 cut(s) 857, 1161, 1206, 1305, 1953
BspT104I TTCGAA 1 cut(s) 969
BspT107I GGYRCC 1 cut(s) 66
BspTI CTTAAG 1 cut(s) 2377
BspTNI GGTCTC 3 cut(s) 593, 1901, 2629
BsrBI CCGCTC 3 cut(s) 125, 152, 245
BsrI ACTGG 1 cut(s) 761
BssECI CCNNGG 6 cut(s) 342, 1035, 1755, 2110, 2464, 2705
BssNAI GTATAC 1 cut(s) 1847
BssNI GRCGYC 1 cut(s) 2171
BssT1I CCWWGG 5 cut(s) 1035, 1755, 2110, 2464, 2705
Bst1107I GTATAC 1 cut(s) 1847
Bst2UI CCWGG 3 cut(s) 64, 933, 2068
Bst4CI ACNGT 6 cut(s) 637, 670, 679, 1378, 1817, 2579
Bst6I CTCTTC 2 cut(s) 299, 1117
BstACI GRCGYC 1 cut(s) 2171
BstAFI CTTAAG 1 cut(s) 2377
BstBI TTCGAA 1 cut(s) 969
BstC8I GCNNGC 2 cut(s) 120, 1654
BstDEI CTNAG 9 cut(s) 22, 287, 298, 455, 1293, 1862, 2032, 2504, 2771
BstDSI CCRYGG 1 cut(s) 1755
BstF5I GGATG 3 cut(s) 775, 2059, 2094
BstFNI CGCG 2 cut(s) 400, 2550
BstH2I RGCGCY 1 cut(s) 2735
BstHHI GCGC 4 cut(s) 284, 400, 2342, 2734
BstMAI GTCTC 5 cut(s) 231, 265, 593, 1901, 2629
BstMCI CGRYCG 2 cut(s) 97, 2548
BstMWI GCNNNNNNNGC 7 cut(s) 32, 105, 143, 242, 279, 1567, 2729
BstNI CCWGG 3 cut(s) 64, 933, 2068
BstNSI RCATGY 5 cut(s) 986, 1029, 1252, 1436, 1565
BstSCI CCNGG 4 cut(s) 62, 931, 1693, 2066
BstSFI CTRYAG 1 cut(s) 2575
BstSLI GKGCMC 1 cut(s) 2399
BstUI CGCG 2 cut(s) 400, 2550
BstV1I GCAGC 1 cut(s) 915
BstV2I GAAGAC 2 cut(s) 1211, 2523
BstX2I RGATCY 5 cut(s) 208, 862, 1107, 1945, 2381
BstYI RGATCY 5 cut(s) 208, 862, 1107, 1945, 2381
BstZ17I GTATAC 1 cut(s) 1847
BstZI CGGCCG 1 cut(s) 94
Bsu15I ATCGAT 1 cut(s) 509
BsuTUI ATCGAT 1 cut(s) 509
BtgI CCRYGG 1 cut(s) 1755
BtrI CACGTC 1 cut(s) 217
BtsCI GGATG 3 cut(s) 775, 2059, 2094
BtsI GCAGTG 2 cut(s) 909, 2518
BtsIMutI CAGTG 6 cut(s) 284, 684, 768, 909, 1822, 2518
Cac8I GCNNGC 2 cut(s) 120, 1654
CaiI CAGNNNCTG 1 cut(s) 1066
CfoI GCGC 4 cut(s) 284, 400, 2342, 2734
Cfr13I GGNCC 9 cut(s) 102, 160, 548, 811, 1015, 2288, 2333, 2395, 2396
ClaI ATCGAT 1 cut(s) 509
CseI GACGC 1 cut(s) 2160
Csp6I GTAC 7 cut(s) 695, 1220, 1374, 1676, 2138, 2157, 2580
CspCI CAANNNNNGTGG 2 cut(s) 468, 503
CviQI GTAC 7 cut(s) 695, 1220, 1374, 1676, 2138, 2157, 2580
DdeI CTNAG 9 cut(s) 22, 287, 298, 455, 1293, 1862, 2032, 2504, 2771
DraI TTTAAA 1 cut(s) 1590
EaeI YGGCCR 2 cut(s) 94, 717
EagI CGGCCG 1 cut(s) 94
Eam1104I CTCTTC 2 cut(s) 299, 1117
EarI CTCTTC 2 cut(s) 299, 1117
EciI GGCGGA 1 cut(s) 266
Ecl136II GAGCTC 3 cut(s) 118, 1615, 2572
EclXI CGGCCG 1 cut(s) 94
Eco130I CCWWGG 5 cut(s) 1035, 1755, 2110, 2464, 2705
Eco147I AGGCCT 1 cut(s) 62
Eco24I GRGCYC 5 cut(s) 120, 1617, 2365, 2399, 2574
Eco31I GGTCTC 3 cut(s) 593, 1901, 2629
Eco32I GATATC 1 cut(s) 2410
Eco47I GGWCC 4 cut(s) 102, 160, 811, 2288
Eco47III AGCGCT 1 cut(s) 2733
Eco52I CGGCCG 1 cut(s) 94
Eco53kI GAGCTC 3 cut(s) 118, 1615, 2572
Eco57I CTGAAG 4 cut(s) 499, 1088, 2341, 2771
EcoICRI GAGCTC 3 cut(s) 118, 1615, 2572
EcoO109I RGGNCCY 3 cut(s) 2333, 2395, 2396
EcoRI GAATTC 2 cut(s) 1040, 1537
EcoRII CCWGG 3 cut(s) 62, 931, 2066
EcoRV GATATC 1 cut(s) 2410
EcoT14I CCWWGG 5 cut(s) 1035, 1755, 2110, 2464, 2705
EcoT22I ATGCAT 1 cut(s) 1254
EcoT38I GRGCYC 5 cut(s) 120, 1617, 2365, 2399, 2574
ErhI CCWWGG 5 cut(s) 1035, 1755, 2110, 2464, 2705
Esp3I CGTCTC 2 cut(s) 231, 265
FalI AAGNNNNNCTT 2 cut(s) 1167, 1199
FaqI GGGAC 1 cut(s) 2359
FauI CCCGC 2 cut(s) 113, 151
FauNDI CATATG 2 cut(s) 413, 441
FbaI TGATCA 2 cut(s) 1506, 2127
FblI GTMKAC 1 cut(s) 1846
Fnu4HI GCNGC 4 cut(s) 97, 123, 274, 929
FokI GGATG 3 cut(s) 782, 2066, 2101
FriOI GRGCYC 5 cut(s) 120, 1617, 2365, 2399, 2574
Fsp4HI GCNGC 4 cut(s) 97, 123, 274, 929
FspBI CTAG 6 cut(s) 264, 555, 731, 1653, 2135, 2706
GlaI GCGC 4 cut(s) 283, 399, 2341, 2733
GluI GCNGC 4 cut(s) 97, 123, 274, 929
GsaI CCCAGC 2 cut(s) 549, 2346
GsuI CTGGAG 1 cut(s) 2349
HaeII RGCGCY 1 cut(s) 2735
HapII CCGG 4 cut(s) 100, 1618, 1695, 2421
HgaI GACGC 1 cut(s) 2160
HhaI GCGC 4 cut(s) 284, 400, 2342, 2734
Hin1I GRCGYC 1 cut(s) 2171
Hin6I GCGC 4 cut(s) 282, 398, 2340, 2732
HinP1I GCGC 4 cut(s) 282, 398, 2340, 2732
HincII GTYRAC 1 cut(s) 1459
HindII GTYRAC 1 cut(s) 1459
HindIII AAGCTT 2 cut(s) 1826, 2783
HpaI GTTAAC 1 cut(s) 1459
HpaII CCGG 4 cut(s) 100, 1618, 1695, 2421
HphI GGTGA 5 cut(s) 22, 750, 1178, 1256, 2710
Hpy166II GTNNAC 6 cut(s) 1222, 1381, 1430, 1459, 1813, 1847
Hpy188III TCNNGA 5 cut(s) 1116, 1528, 1794, 2316, 2366
Hpy8I GTNNAC 6 cut(s) 1222, 1381, 1430, 1459, 1813, 1847
Hpy99I CGWCG 2 cut(s) 182, 281
HpyAV CCTTC 9 cut(s) 121, 1193, 1349, 1511, 1667, 1936, 1969, 2109, 2324
HpyCH4III ACNGT 6 cut(s) 637, 670, 679, 1378, 1817, 2579
HpyCH4IV ACGT 5 cut(s) 216, 378, 755, 2042, 2429
HpyF10VI GCNNNNNNNGC 7 cut(s) 32, 105, 143, 242, 279, 1567, 2729
HpyF3I CTNAG 9 cut(s) 22, 287, 298, 455, 1293, 1862, 2032, 2504, 2771
HpySE526I ACGT 5 cut(s) 216, 378, 755, 2042, 2429
Hsp92I GRCGYC 1 cut(s) 2171
HspAI GCGC 4 cut(s) 282, 398, 2340, 2732
Ksp22I TGATCA 2 cut(s) 1506, 2127
KspAI GTTAAC 1 cut(s) 1459
LmnI GCTCC 6 cut(s) 179, 395, 1620, 2368, 2569, 2758
Lsp1109I GCAGC 1 cut(s) 915
LweI GCATC 2 cut(s) 119, 1774
MaeI CTAG 6 cut(s) 264, 555, 731, 1653, 2135, 2706
MaeII ACGT 5 cut(s) 216, 378, 755, 2042, 2429
MbiI CCGCTC 3 cut(s) 125, 152, 245
MflI RGATCY 5 cut(s) 208, 862, 1107, 1945, 2381
MhlI GDGCHC 6 cut(s) 120, 1617, 1648, 2365, 2399, 2574
MlsI TGGCCA 1 cut(s) 719
MluNI TGGCCA 1 cut(s) 719
MlyI GAGTC 5 cut(s) 14, 44, 263, 2065, 2433
MmeI TCCRAC 5 cut(s) 72, 78, 187, 480, 698
Mox20I TGGCCA 1 cut(s) 719
Mph1103I ATGCAT 1 cut(s) 1254
MscI TGGCCA 1 cut(s) 719
MslI CAYNNNNRTG 3 cut(s) 1257, 1437, 2252
Msp20I TGGCCA 1 cut(s) 719
MspA1I CMGCKG 1 cut(s) 2567
MspCI CTTAAG 1 cut(s) 2377
MspI CCGG 4 cut(s) 100, 1618, 1695, 2421
MspR9I CCNGG 4 cut(s) 64, 933, 1695, 2068
Mva1269I GAATGC 1 cut(s) 1479
MvaI CCWGG 3 cut(s) 64, 933, 2068
MvnI CGCG 2 cut(s) 400, 2550
MwoI GCNNNNNNNGC 7 cut(s) 32, 105, 143, 242, 279, 1567, 2729
NciI CCSGG 1 cut(s) 1695
NcoI CCATGG 1 cut(s) 1755
NdeI CATATG 2 cut(s) 413, 441
NheI GCTAGC 1 cut(s) 1652
NlaIV GGNNCC 6 cut(s) 68, 104, 2205, 2364, 2397, 2398
NmeAIII GCCGAG 2 cut(s) 72, 323
NmuCI GTSAC 6 cut(s) 217, 337, 756, 1244, 2245, 2425
NsiI ATGCAT 1 cut(s) 1254
NspI RCATGY 5 cut(s) 986, 1029, 1252, 1436, 1565
NspV TTCGAA 1 cut(s) 969
PceI AGGCCT 1 cut(s) 62
PciI ACATGT 2 cut(s) 982, 1025
PcsI WCGNNNNNNNCGW 1 cut(s) 384
PctI GAATGC 1 cut(s) 1479
PfeI GAWTC 5 cut(s) 839, 1331, 1988, 2552, 2701
PflFI GACNNNGTC 1 cut(s) 2074
PflMI CCANNNNNTGG 1 cut(s) 1195
PkrI GCNGC 4 cut(s) 98, 124, 275, 930
PleI GAGTC 5 cut(s) 14, 44, 262, 2065, 2432
PpsI GAGTC 5 cut(s) 14, 44, 262, 2065, 2432
PscI ACATGT 2 cut(s) 982, 1025
PshBI ATTAAT 1 cut(s) 1257
Psp124BI GAGCTC 3 cut(s) 120, 1617, 2574
Psp6I CCWGG 3 cut(s) 62, 931, 2066
PspFI CCCAGC 2 cut(s) 545, 2342
PspGI CCWGG 3 cut(s) 62, 931, 2066
PspN4I GGNNCC 6 cut(s) 68, 104, 2205, 2364, 2397, 2398
PspOMI GGGCCC 1 cut(s) 2395
PspPI GGNCC 9 cut(s) 102, 160, 548, 811, 1015, 2288, 2333, 2395, 2396
PstNI CAGNNNCTG 1 cut(s) 1066
PsuI RGATCY 5 cut(s) 208, 862, 1107, 1945, 2381
PsyI GACNNNGTC 1 cut(s) 2074
RsaI GTAC 7 cut(s) 696, 1221, 1375, 1677, 2139, 2158, 2581
RsaNI GTAC 7 cut(s) 695, 1220, 1374, 1676, 2138, 2157, 2580
RseI CAYNNNNRTG 3 cut(s) 1257, 1437, 2252
SacI GAGCTC 3 cut(s) 120, 1617, 2574
SatI GCNGC 4 cut(s) 97, 123, 274, 929
Sau96I GGNCC 9 cut(s) 102, 160, 548, 811, 1015, 2288, 2333, 2395, 2396
ScaI AGTACT 1 cut(s) 696
SchI GAGTC 5 cut(s) 14, 44, 263, 2065, 2433
ScrFI CCNGG 4 cut(s) 64, 933, 1695, 2068
SduI GDGCHC 6 cut(s) 120, 1617, 1648, 2365, 2399, 2574
SfaNI GCATC 2 cut(s) 119, 1774
SfcI CTRYAG 1 cut(s) 2575
SfuI TTCGAA 1 cut(s) 969
SinI GGWCC 4 cut(s) 102, 160, 811, 2288
SmiMI CAYNNNNRTG 3 cut(s) 1257, 1437, 2252
SmlI CTYRAG 1 cut(s) 2377
SmoI CTYRAG 1 cut(s) 2377
SseBI AGGCCT 1 cut(s) 62
SspI AATATT 1 cut(s) 1783
SspMI CTAG 6 cut(s) 264, 555, 731, 1653, 2135, 2706
SstI GAGCTC 3 cut(s) 120, 1617, 2574
StuI AGGCCT 1 cut(s) 62
StyD4I CCNGG 4 cut(s) 62, 931, 1693, 2066
StyI CCWWGG 5 cut(s) 1035, 1755, 2110, 2464, 2705
TaaI ACNGT 6 cut(s) 637, 670, 679, 1378, 1817, 2579
TaiI ACGT 5 cut(s) 219, 381, 758, 2045, 2432
TaqI TCGA 8 cut(s) 18, 114, 127, 509, 953, 969, 2226, 2673
TaqII GACCGA 2 cut(s) 617, 799
TatI WGTACW 5 cut(s) 694, 1675, 2137, 2156, 2579
TauI GCSGC 3 cut(s) 99, 125, 276
TfiI GAWTC 5 cut(s) 839, 1331, 1988, 2552, 2701
TscAI CASTG 6 cut(s) 291, 684, 768, 916, 1822, 2518
TseFI GTSAC 6 cut(s) 217, 337, 756, 1244, 2245, 2425
TseI GCWGC 1 cut(s) 928
Tsp45I GTSAC 6 cut(s) 217, 337, 756, 1244, 2245, 2425
TspDTI ATGAA 8 cut(s) 428, 837, 1275, 1530, 1649, 1955, 1988, 2778
TspGWI ACGGA 5 cut(s) 166, 247, 367, 1115, 1598
TspRI CASTG 6 cut(s) 291, 684, 768, 916, 1822, 2518
Tth111I GACNNNGTC 1 cut(s) 2074
Van91I CCANNNNNTGG 1 cut(s) 1195
Vha464I CTTAAG 1 cut(s) 2377
VpaK11BI GGWCC 4 cut(s) 102, 160, 811, 2288
VspI ATTAAT 1 cut(s) 1257
XapI RAATTY 5 cut(s) 1040, 1316, 1324, 1498, 1537
XceI RCATGY 5 cut(s) 986, 1029, 1252, 1436, 1565
XmaJI CCTAGG 1 cut(s) 2705
XmiI GTMKAC 1 cut(s) 1846
XspI CTAG 6 cut(s) 264, 555, 731, 1653, 2135, 2706
ZrmI AGTACT 1 cut(s) 696
Zsp2I ATGCAT 1 cut(s) 1254
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.