Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0002088

Physical Location & Seq

Genomic Coordinates Reverse (-)

5174999 .. 5179547

Gene Structure 4549 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g04150.10

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1878 bp

ATGGATTGTGTAGTTGGTTTAGAACCGGTTCTTTCAATCATGGCATCCGATGATTTAGTCCTTTATGAAGGAGCTAACATACATGAGATGGATTGCAGTGGGTATTTTTTTCTGGAAGAAATGAAAGAGAACAATATATCACCAGTCGCGGATGAGAATGTTAATGGTAGTTGTAAAGCTACAAATGTTGGAATCGTTGAAGTTGAAAGAATTGTTGGAGGTGTGGAGGAAGAGTTGTTAGTGGCTACTCGCAGCCCTAATGGAGAGAGAGAAAATTTCTCCCAGCCAAATACTGCTAGTTATGATATGTTGCCTAGACGTAAGTTAAAAAGATTGAGAAAGGCAAATTGTGAAGATATGATGCCTCTGAATAAAAGGCAAACAAGTAGACATGAGACCAAGATCATATGTTCAGCTACTGAATTTTCTGTTTCGCAAAAGAAATTGTTGAAGCCCTCCTCCAAGACGAAGGGAAGTGACAAGGATAAAATGGCTCGGAGACTGCAATCACACAACTTAGAGCATGACCAGGCTGTTGCCACTCCCAAAGAGAACCAGCAGCGTGAAACAAATCAAAAGCCAATCAGCATAGTACAGAAATTAAAACGGAATTGTGATGGCATGCATACTAATGAAAGAAATGGACGCCATAAATCTGTTTCTCTTAAGGATCAACCCGAGAAAAAGGAATTTCCAATTTTTGAATCTTATGTTGTAGAAGAAGAAGAAGGTTCAGGCCCGCATGCTAATGCTCATAAGCATCATGTTAACAATGAGTTAAGGATGCTGGAAAGGTTTGGGGGCAAAAACTTTGTGATAAAATATGAAGGCCATATCAAGAATGAAAGTTCCAGTTGCTTTGTACTGCAGCACGTTGAGCATGATAGGCCTGAGGTTTTAAAGCAAGAGATAGGTCTTTCTCATCTACATTGGTACGGCTATTGCTTGTTTAAGGCATTGGCAACCCTTCATAGACAGACCAAAAAAGGTCTCAAATCGACTTTTGATCTTAAGGACTTGAAAAAAAAGGCTTTCAGCCAAATGAAGCCCTACAATTCTTCGGGTAGCTGTTGCGTAATCAAAAGTCAGGGTGCAGATGGCTCAGGTATAACGTCAGTAAAGGATGTGAGTAATATCAGGACGACTTCAGTAGAAAGGCTGATGGAACCTTTGCCATCCCAGGGAAGGAAAGAGCTCATCAACATAGTACAGGAAGCAATGCAGAATCGAAACCATATATCATCAGGTGTTTCGGCTCCTATGAGAAAGAGGATTCCTGCCCCTCCTAGAAATGTGGATGACAAGCTTTTCTGTATCACTCCAATGCCTCTGCACTCAACTGGCAATGGTGTTGGTGGTGCAGCCTTGATCAGAAGCAGAGGAGGTGGAAAGCAGAAAAAAGAAGGTCCTTGTGCTGGAACTAAAGGATACCGAGCTCCGGAGGTTCTCCTGAGATCCCCACATCAAGGCCCCAAGCTTGATATCTGGTCTGCCGGTGTCACTCTACTCTACTTCATGATTGGCAGAACGCCCTTTGGTGGCGATCCCGAACAGAACATAAAGGACATAGCAAAGTTGAGAGGCAGTGAGGATTTATGGGAAGTTGCCAAGCTACACGACCGCGAATTATCATTTCCAGTGGACCTCTATAGTACAGAGTCTTTGCCATCTCTCAAATTGCAGGATTGGTGTAGAAGGAGCACAAAGAGGCCGGATTTCTTCAACCAAATCCCTAGACCGCTCTTTGATCTCGTGGATAAGTGCTTGACAGTGAACCCCAGGGTTAGGATAAGCGCCGAGGAAGCACTTCGACATGAGTTTTTTGCTCCATGTCATGAAGAGCTCAGAAAGCTGAGGCTTCAGAGGCAGGTGCGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000082 GO:0000278 GO:0000724 GO:0000725 GO:0000727 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005819 GO:0005856 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006270 GO:0006275 GO:0006281 GO:0006302 GO:0006310 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006897 GO:0006909 GO:0006950 GO:0006974 GO:0007049 GO:0007346 GO:0008150 GO:0008152 GO:0008284 GO:0008360 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010389 GO:0010556 GO:0010557 GO:0010564 GO:0010571 GO:0010604 GO:0010948 GO:0010971 GO:0015630 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019219 GO:0019222 GO:0019538 GO:0022402 GO:0022603 GO:0022604 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0033262 GO:0033554 GO:0034641 GO:0034645 GO:0036211 GO:0042127 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044421 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044446 GO:0044464 GO:0044770 GO:0044772 GO:0044843 GO:0045171 GO:0045740 GO:0045786 GO:0045787 GO:0045931 GO:0045935 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051054 GO:0051128 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065008 GO:0070013 GO:0070316 GO:0070317 GO:0071704 GO:0072686 GO:0080090 GO:0090068 GO:0090304 GO:0090329 GO:0098657 GO:0140096 GO:1901360 GO:1901564 GO:1901576 GO:1901987 GO:1901989 GO:1901990 GO:1901992 GO:1902749 GO:1902751 GO:1903047 GO:2000105 GO:2000112

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 map04110 map04111 map04113

Pfam Domains

Protein Families

Pkinase

Protein Analysis

626

Amino Acids

70.66

Weight (kDa)

9.12

Isoelectric Point (pI)

49.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002088)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G16970
fragaria_vesca	FvH4_5g20210 FvH4_5g20210 FvH4_7g10370 FvH4_7g10370 FvH4_7g10370 FvH4_7g10370 FvH4_7g10370 FvH4_7g10370 FvH4_7g10370
malus_domestica	MD04G1051700.v1.1 MD06G1048400.v1.1 MD07G1109800.v1.1
prunus_persica	Prupe.5G058600_v2.0.a1 Prupe.5G058600_v2.0.a1
pyrus_communis	pycom04g04540 pycom06g04150 pycom07g09450 pycom07g09460
rosa_chinensis	RchiOBHm_Chr1g0348071 RchiOBHm_Chr7g0205281
rosa_laevigata	RLG00000003391 RLG00000028693
rosa_multiflora	Rmu_co8277205.1_g000001 Rmu_sc0000253.1_g000018 Rmu_sc0001072.1_g000017 Rmu_sc0002523.1_g000002
rosa_roxburghii	Rroxscaffold_3G00252510 Rroxscaffold_4G00307260 Rroxscaffold_4G00307270
rosa_rugosa	Rorug01G0192000 Rorug01G0192100 Rorug07G0089300 Rorug07G0089400.1
rosa_samantha	Rh1AG209800 Rh1BG175400 Rh1CG194200 Rh1DG205200 Rh7AG219800 Rh7BG215900 Rh7CG232700 Rh7DG226800
rosa_wichuraiana	Rw1G017500 Rw7G019010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1858
Acc36I	ACCTGC	1 cut(s)	1858
AccBSI	CCGCTC	1 cut(s)	1741
AccI	GTMKAC	1 cut(s)	388
AccII	CGCG	2 cut(s)	149, 1623
AccIII	TCCGGA	1 cut(s)	1438
AciI	CCGC	5 cut(s)	149, 740, 1621, 1739, 1873
AclWI	GGATC	3 cut(s)	678, 1449, 1538
AcsI	RAATTY	3 cut(s)	274, 422, 689
AcuI	CTGAAG	2 cut(s)	1131, 1844
AcyI	GRCGYC	1 cut(s)	646
AfaI	GTAC	5 cut(s)	594, 864, 935, 1209, 1654
AfiI	CCNNNNNNNGG	7 cut(s)	1181, 1185, 1415, 1438, 1466, 1538, 1785
AflII	CTTAAG	2 cut(s)	665, 1010
AgeI	ACCGGT	1 cut(s)	25
AgsI	TTSAA	7 cut(s)	36, 200, 206, 451, 704, 1021, 1723
AjnI	CCWGG	3 cut(s)	528, 1179, 1778
AjuI	GAANNNNNNNTTGG	2 cut(s)	198, 230
Alw21I	GWGCWC	4 cut(s)	1197, 1438, 1703, 1845
Alw26I	GTCTC	3 cut(s)	389, 493, 995
AlwI	GGATC	3 cut(s)	678, 1449, 1538
AlwNI	CAGNNNCTG	1 cut(s)	419
Ama87I	CYCGRG	1 cut(s)	677
Aor13HI	TCCGGA	1 cut(s)	1438
AoxI	GGCC	5 cut(s)	736, 829, 887, 1468, 1709
ApeKI	GCWGC	4 cut(s)	252, 559, 868, 1361
ApoI	RAATTY	3 cut(s)	274, 422, 689
AsiGI	ACCGGT	1 cut(s)	25
Asp700I	GAANNNNTTC	2 cut(s)	27, 1806
AspLEI	GCGC	1 cut(s)	1796
AspS9I	GGNCC	4 cut(s)	737, 1406, 1469, 1642
AsuHPI	GGTGA	1 cut(s)	132
AvaI	CYCGRG	1 cut(s)	677
AvaII	GGWCC	2 cut(s)	1406, 1642
AxyI	CCTNAGG	1 cut(s)	891
BanII	GRGCYC	3 cut(s)	1197, 1438, 1845
BauI	CACGAG	1 cut(s)	1751
Bbv12I	GWGCWC	4 cut(s)	1197, 1438, 1703, 1845
BbvCI	CCTCAGC	1 cut(s)	1853
BbvI	GCAGC	4 cut(s)	264, 571, 880, 1373
BccI	CCATC	6 cut(s)	82, 611, 1091, 1156, 1183, 1675
BceAI	ACGGC	1 cut(s)	952
BciT130I	CCWGG	3 cut(s)	530, 1181, 1780
BciVI	GTATCC	1 cut(s)	1421
BclI	TGATCA	1 cut(s)	1368
BcoDI	GTCTC	3 cut(s)	389, 493, 995
BfaI	CTAG	4 cut(s)	297, 315, 1287, 1734
BfmI	CTRYAG	2 cut(s)	866, 1648
BfoI	RGCGCY	1 cut(s)	1797
BfrI	CTTAAG	2 cut(s)	665, 1010
BfuAI	ACCTGC	1 cut(s)	1858
BfuI	GTATCC	1 cut(s)	1421
BisI	GCNGC	4 cut(s)	253, 560, 869, 1362
BlsI	GCNGC	4 cut(s)	254, 561, 870, 1363
Bme1390I	CCNGG	3 cut(s)	530, 1181, 1780
Bme18I	GGWCC	2 cut(s)	1406, 1642
BmeT110I	CYCGRG	1 cut(s)	677
BmgT120I	GGNCC	4 cut(s)	737, 1406, 1469, 1642
BmiI	GGNNCC	3 cut(s)	1167, 1257, 1471
BmrFI	CCNGG	3 cut(s)	530, 1181, 1780
BmsI	GCATC	4 cut(s)	53, 351, 769, 774
Bpu10I	CCTNAGC	2 cut(s)	1102, 1853
BsaHI	GRCGYC	1 cut(s)	646
BsaI	GGTCTC	2 cut(s)	389, 995
BsaJI	CCNNGG	5 cut(s)	1179, 1180, 1778, 1779, 1797
BsaWI	WCCGGW	2 cut(s)	25, 1438
BsaXI	ACNNNNNCTCC	2 cut(s)	218, 248
Bsc4I	CCNNNNNNNGG	7 cut(s)	1181, 1185, 1415, 1438, 1466, 1538, 1785
Bse118I	RCCGGY	2 cut(s)	25, 1493
Bse1I	ACTGG	4 cut(s)	143, 852, 1345, 1637
Bse21I	CCTNAGG	1 cut(s)	891
Bse3DI	GCAATG	2 cut(s)	1224, 1351
BseAI	TCCGGA	1 cut(s)	1438
BseBI	CCWGG	3 cut(s)	530, 1181, 1780
BseDI	CCNNGG	5 cut(s)	1179, 1180, 1778, 1779, 1797
BseGI	GGATG	6 cut(s)	44, 157, 789, 1129, 1175, 1303
BseLI	CCNNNNNNNGG	7 cut(s)	1181, 1185, 1415, 1438, 1466, 1538, 1785
BseMI	GCAATG	2 cut(s)	1224, 1351
BseMII	CTCAG	5 cut(s)	882, 1116, 1442, 1844, 1858
BseNI	ACTGG	4 cut(s)	143, 852, 1345, 1637
BseRI	GAGGAG	2 cut(s)	448, 1395
BseXI	GCAGC	4 cut(s)	264, 571, 880, 1373
BseYI	CCCAGC	1 cut(s)	282
BsgI	GTGCAG	3 cut(s)	1113, 1316, 1380
Bsh1236I	CGCG	2 cut(s)	149, 1623
Bsh1285I	CGRYCG	1 cut(s)	1621
BshFI	GGCC	5 cut(s)	738, 831, 889, 1470, 1711
BshTI	ACCGGT	1 cut(s)	25
BsiEI	CGRYCG	1 cut(s)	1621
BsiHKAI	GWGCWC	4 cut(s)	1197, 1438, 1703, 1845
BsiHKCI	CYCGRG	1 cut(s)	677
BsiSI	CCGG	4 cut(s)	26, 1439, 1494, 1712
BslI	CCNNNNNNNGG	7 cut(s)	1181, 1185, 1415, 1438, 1466, 1538, 1785
BsmAI	GTCTC	3 cut(s)	389, 493, 995
BsnI	GGCC	5 cut(s)	738, 831, 889, 1470, 1711
Bso31I	GGTCTC	2 cut(s)	389, 995
BsoBI	CYCGRG	1 cut(s)	677
Bsp1286I	GDGCHC	4 cut(s)	1197, 1438, 1703, 1845
Bsp13I	TCCGGA	1 cut(s)	1438
Bsp143I	GATC	7 cut(s)	402, 670, 1006, 1368, 1454, 1543, 1747
BspACI	CCGC	5 cut(s)	149, 740, 1621, 1739, 1873
BspANI	GGCC	5 cut(s)	738, 831, 889, 1470, 1711
BspCNI	CTCAG	5 cut(s)	883, 1115, 1443, 1845, 1857
BspEI	TCCGGA	1 cut(s)	1438
BspFNI	CGCG	2 cut(s)	149, 1623
BspHI	TCATGA	2 cut(s)	1515, 1834
BspLI	GGNNCC	3 cut(s)	1167, 1257, 1471
BspMAI	CTGCAG	1 cut(s)	870
BspMI	ACCTGC	1 cut(s)	1858
BspPI	GGATC	3 cut(s)	678, 1449, 1538
BspQI	GCTCTTC	1 cut(s)	1833
BspTI	CTTAAG	2 cut(s)	665, 1010
BspTNI	GGTCTC	2 cut(s)	389, 995
BsrBI	CCGCTC	1 cut(s)	1741
BsrDI	GCAATG	2 cut(s)	1224, 1351
BsrFI	RCCGGY	2 cut(s)	25, 1493
BsrI	ACTGG	4 cut(s)	143, 852, 1345, 1637
BssAI	RCCGGY	2 cut(s)	25, 1493
BssECI	CCNNGG	5 cut(s)	1179, 1180, 1778, 1779, 1797
BssMI	GATC	7 cut(s)	402, 670, 1006, 1368, 1454, 1543, 1747
BssNI	GRCGYC	1 cut(s)	646
BssSI	CACGAG	1 cut(s)	1751
Bst2BI	CACGAG	1 cut(s)	1751
Bst2UI	CCWGG	3 cut(s)	530, 1181, 1780
Bst4CI	ACNGT	1 cut(s)	1771
Bst6I	CTCTTC	2 cut(s)	225, 1833
BstACI	GRCGYC	1 cut(s)	646
BstAFI	CTTAAG	2 cut(s)	665, 1010
BstC8I	GCNNGC	3 cut(s)	623, 740, 744
BstDEI	CTNAG	6 cut(s)	517, 891, 1102, 1451, 1844, 1853
BstF5I	GGATG	6 cut(s)	44, 157, 789, 1129, 1175, 1303
BstFNI	CGCG	2 cut(s)	149, 1623
BstH2I	RGCGCY	1 cut(s)	1797
BstHHI	GCGC	1 cut(s)	1796
BstKTI	GATC	7 cut(s)	405, 673, 1009, 1371, 1457, 1546, 1750
BstMAI	GTCTC	3 cut(s)	389, 493, 995
BstMBI	GATC	7 cut(s)	402, 670, 1006, 1368, 1454, 1543, 1747
BstMCI	CGRYCG	1 cut(s)	1621
BstMWI	GCNNNNNNNGC	5 cut(s)	877, 886, 1802, 1849, 1864
BstNI	CCWGG	3 cut(s)	530, 1181, 1780
BstNSI	RCATGY	2 cut(s)	625, 746
BstSCI	CCNGG	3 cut(s)	528, 1179, 1778
BstSFI	CTRYAG	2 cut(s)	866, 1648
BstUI	CGCG	2 cut(s)	149, 1623
BstV1I	GCAGC	4 cut(s)	264, 571, 880, 1373
BstX2I	RGATCY	1 cut(s)	1454
BstYI	RGATCY	1 cut(s)	1454
Bsu36I	CCTNAGG	1 cut(s)	891
BsuI	GTATCC	1 cut(s)	1421
BsuRI	GGCC	5 cut(s)	738, 831, 889, 1470, 1711
BtsCI	GGATG	6 cut(s)	44, 157, 789, 1129, 1175, 1303
BtsI	GCAGTG	2 cut(s)	103, 1591
BtsIMutI	CAGTG	4 cut(s)	103, 1591, 1644, 1776
BveI	ACCTGC	1 cut(s)	1858
Cac8I	GCNNGC	3 cut(s)	623, 740, 744
CaiI	CAGNNNCTG	1 cut(s)	419
CciI	TCATGA	2 cut(s)	1515, 1834
CfoI	GCGC	1 cut(s)	1796
Cfr10I	RCCGGY	2 cut(s)	25, 1493
Cfr13I	GGNCC	4 cut(s)	737, 1406, 1469, 1642
CseI	GACGC	1 cut(s)	654
Csp6I	GTAC	5 cut(s)	593, 863, 934, 1208, 1653
CspAI	ACCGGT	1 cut(s)	25
CviQI	GTAC	5 cut(s)	593, 863, 934, 1208, 1653
DdeI	CTNAG	6 cut(s)	517, 891, 1102, 1451, 1844, 1853
DpnI	GATC	7 cut(s)	404, 672, 1008, 1370, 1456, 1545, 1749
DpnII	GATC	7 cut(s)	402, 670, 1006, 1368, 1454, 1543, 1747
DraI	TTTAAA	1 cut(s)	900
Eam1104I	CTCTTC	2 cut(s)	225, 1833
EarI	CTCTTC	2 cut(s)	225, 1833
Ecl136II	GAGCTC	3 cut(s)	1195, 1436, 1843
Eco147I	AGGCCT	1 cut(s)	889
Eco24I	GRGCYC	3 cut(s)	1197, 1438, 1845
Eco31I	GGTCTC	2 cut(s)	389, 995
Eco32I	GATATC	1 cut(s)	1483
Eco47I	GGWCC	2 cut(s)	1406, 1642
Eco53kI	GAGCTC	3 cut(s)	1195, 1436, 1843
Eco57I	CTGAAG	2 cut(s)	1131, 1844
Eco81I	CCTNAGG	1 cut(s)	891
Eco88I	CYCGRG	1 cut(s)	677
EcoICRI	GAGCTC	3 cut(s)	1195, 1436, 1843
EcoO109I	RGGNCCY	2 cut(s)	1406, 1469
EcoRII	CCWGG	3 cut(s)	528, 1179, 1778
EcoRV	GATATC	1 cut(s)	1483
EcoT22I	ATGCAT	1 cut(s)	627
EcoT38I	GRGCYC	3 cut(s)	1197, 1438, 1845
FauI	CCCGC	1 cut(s)	747
FauNDI	CATATG	1 cut(s)	407
FbaI	TGATCA	1 cut(s)	1368
FblI	GTMKAC	1 cut(s)	388
Fnu4HI	GCNGC	4 cut(s)	253, 560, 869, 1362
FokI	GGATG	6 cut(s)	31, 164, 796, 1136, 1162, 1310
FriOI	GRGCYC	3 cut(s)	1197, 1438, 1845
Fsp4HI	GCNGC	4 cut(s)	253, 560, 869, 1362
FspBI	CTAG	4 cut(s)	297, 315, 1287, 1734
GlaI	GCGC	1 cut(s)	1795
GluI	GCNGC	4 cut(s)	253, 560, 869, 1362
GsaI	CCCAGC	1 cut(s)	286
HaeII	RGCGCY	1 cut(s)	1797
HaeIII	GGCC	5 cut(s)	738, 831, 889, 1470, 1711
HapII	CCGG	4 cut(s)	26, 1439, 1494, 1712
HgaI	GACGC	1 cut(s)	654
HhaI	GCGC	1 cut(s)	1796
Hin1I	GRCGYC	1 cut(s)	646
Hin6I	GCGC	1 cut(s)	1794
HinP1I	GCGC	1 cut(s)	1794
HincII	GTYRAC	1 cut(s)	769
HindII	GTYRAC	1 cut(s)	769
HindIII	AAGCTT	2 cut(s)	1304, 1475
HinfI	GANTC	5 cut(s)	192, 704, 1225, 1273, 1658
HpaI	GTTAAC	1 cut(s)	769
HpaII	CCGG	4 cut(s)	26, 1439, 1494, 1712
HphI	GGTGA	1 cut(s)	132
Hpy166II	GTNNAC	4 cut(s)	389, 769, 1642, 1774
Hpy188I	TCNGA	6 cut(s)	49, 369, 498, 1373, 1847, 1863
Hpy188III	TCNNGA	8 cut(s)	113, 838, 1138, 1439, 1450, 1516, 1547, 1835
Hpy8I	GTNNAC	4 cut(s)	389, 769, 1642, 1774
HpyAV	CCTTC	8 cut(s)	62, 463, 722, 821, 977, 1179, 1397, 1689
HpyCH4III	ACNGT	1 cut(s)	1771
HpyCH4IV	ACGT	3 cut(s)	319, 873, 1112
HpyCH4V	TGCA	9 cut(s)	96, 505, 625, 868, 1094, 1222, 1333, 1361, 1681
HpyF10VI	GCNNNNNNNGC	5 cut(s)	877, 886, 1802, 1849, 1864
HpyF3I	CTNAG	6 cut(s)	517, 891, 1102, 1451, 1844, 1853
HpySE526I	ACGT	3 cut(s)	319, 873, 1112
Hsp92I	GRCGYC	1 cut(s)	646
HspAI	GCGC	1 cut(s)	1794
Kpn2I	TCCGGA	1 cut(s)	1438
Ksp22I	TGATCA	1 cut(s)	1368
KspAI	GTTAAC	1 cut(s)	769
Kzo9I	GATC	7 cut(s)	402, 670, 1006, 1368, 1454, 1543, 1747
LguI	GCTCTTC	1 cut(s)	1833
LmnI	GCTCC	5 cut(s)	71, 1261, 1441, 1698, 1831
Lsp1109I	GCAGC	4 cut(s)	264, 571, 880, 1373
LweI	GCATC	4 cut(s)	53, 351, 769, 774
MaeI	CTAG	4 cut(s)	297, 315, 1287, 1734
MaeII	ACGT	3 cut(s)	319, 873, 1112
MaeIII	GTNAC	2 cut(s)	476, 1498
MalI	GATC	7 cut(s)	404, 672, 1008, 1370, 1456, 1545, 1749
MbiI	CCGCTC	1 cut(s)	1741
MboI	GATC	7 cut(s)	402, 670, 1006, 1368, 1454, 1543, 1747
MboII	GAAGA	9 cut(s)	128, 242, 365, 731, 734, 737, 1050, 1711, 1850
MflI	RGATCY	1 cut(s)	1454
MhlI	GDGCHC	4 cut(s)	1197, 1438, 1703, 1845
MlyI	GAGTC	1 cut(s)	1667
MmeI	TCCRAC	2 cut(s)	169, 196
Mph1103I	ATGCAT	1 cut(s)	627
MroI	TCCGGA	1 cut(s)	1438
MroXI	GAANNNNTTC	2 cut(s)	27, 1806
MseI	TTAA	9 cut(s)	162, 326, 602, 666, 768, 779, 899, 951, 1011
MslI	CAYNNNNRTG	3 cut(s)	630, 747, 1322
MspCI	CTTAAG	2 cut(s)	665, 1010
MspI	CCGG	4 cut(s)	26, 1439, 1494, 1712
MspR9I	CCNGG	3 cut(s)	530, 1181, 1780
MvaI	CCWGG	3 cut(s)	530, 1181, 1780
MvnI	CGCG	2 cut(s)	149, 1623
MwoI	GCNNNNNNNGC	5 cut(s)	877, 886, 1802, 1849, 1864
NdeI	CATATG	1 cut(s)	407
NdeII	GATC	7 cut(s)	402, 670, 1006, 1368, 1454, 1543, 1747
NlaIV	GGNNCC	3 cut(s)	1167, 1257, 1471
NmeAIII	GCCGAG	1 cut(s)	1822
NmuCI	GTSAC	2 cut(s)	476, 1498
NsiI	ATGCAT	1 cut(s)	627
NspI	RCATGY	2 cut(s)	625, 746
PaeI	GCATGC	2 cut(s)	625, 746
PagI	TCATGA	2 cut(s)	1515, 1834
PaqCI	CACCTGC	1 cut(s)	1858
PasI	CCCWGGG	2 cut(s)	1180, 1779
PceI	AGGCCT	1 cut(s)	889
PciSI	GCTCTTC	1 cut(s)	1833
PdmI	GAANNNNTTC	2 cut(s)	27, 1806
PfeI	GAWTC	4 cut(s)	192, 704, 1225, 1273
PinAI	ACCGGT	1 cut(s)	25
PkrI	GCNGC	4 cut(s)	254, 561, 870, 1363
PleI	GAGTC	1 cut(s)	1666
PpsI	GAGTC	1 cut(s)	1666
PpuMI	RGGWCCY	1 cut(s)	1406
Psp124BI	GAGCTC	3 cut(s)	1197, 1438, 1845
Psp5II	RGGWCCY	1 cut(s)	1406
Psp6I	CCWGG	3 cut(s)	528, 1179, 1778
PspFI	CCCAGC	1 cut(s)	282
PspGI	CCWGG	3 cut(s)	528, 1179, 1778
PspN4I	GGNNCC	3 cut(s)	1167, 1257, 1471
PspPI	GGNCC	4 cut(s)	737, 1406, 1469, 1642
PspPPI	RGGWCCY	1 cut(s)	1406
PstI	CTGCAG	1 cut(s)	870
PstNI	CAGNNNCTG	1 cut(s)	419
PsuI	RGATCY	1 cut(s)	1454
RsaI	GTAC	5 cut(s)	594, 864, 935, 1209, 1654
RsaNI	GTAC	5 cut(s)	593, 863, 934, 1208, 1653
RseI	CAYNNNNRTG	3 cut(s)	630, 747, 1322
SacI	GAGCTC	3 cut(s)	1197, 1438, 1845
SapI	GCTCTTC	1 cut(s)	1833
SaqAI	TTAA	9 cut(s)	162, 326, 602, 666, 768, 779, 899, 951, 1011
SatI	GCNGC	4 cut(s)	253, 560, 869, 1362
Sau3AI	GATC	7 cut(s)	402, 670, 1006, 1368, 1454, 1543, 1747
Sau96I	GGNCC	4 cut(s)	737, 1406, 1469, 1642
SchI	GAGTC	1 cut(s)	1667
ScrFI	CCNGG	3 cut(s)	530, 1181, 1780
SduI	GDGCHC	4 cut(s)	1197, 1438, 1703, 1845
SfaNI	GCATC	4 cut(s)	53, 351, 769, 774
SfcI	CTRYAG	2 cut(s)	866, 1648
SinI	GGWCC	2 cut(s)	1406, 1642
SmiMI	CAYNNNNRTG	3 cut(s)	630, 747, 1322
SmlI	CTYRAG	2 cut(s)	665, 1010
SmoI	CTYRAG	2 cut(s)	665, 1010
SphI	GCATGC	2 cut(s)	625, 746
SseBI	AGGCCT	1 cut(s)	889
SsiI	CCGC	5 cut(s)	149, 740, 1621, 1739, 1873
SspMI	CTAG	4 cut(s)	297, 315, 1287, 1734
SstI	GAGCTC	3 cut(s)	1197, 1438, 1845
StuI	AGGCCT	1 cut(s)	889
StyD4I	CCNGG	3 cut(s)	528, 1179, 1778
TaaI	ACNGT	1 cut(s)	1771
TaiI	ACGT	3 cut(s)	322, 876, 1115
TaqI	TCGA	3 cut(s)	998, 1228, 1810
TatI	WGTACW	4 cut(s)	592, 862, 1207, 1652
TfiI	GAWTC	4 cut(s)	192, 704, 1225, 1273
Tru1I	TTAA	9 cut(s)	162, 326, 602, 666, 768, 779, 899, 951, 1011
Tru9I	TTAA	9 cut(s)	162, 326, 602, 666, 768, 779, 899, 951, 1011
TscAI	CASTG	4 cut(s)	103, 1591, 1644, 1776
TseFI	GTSAC	2 cut(s)	476, 1498
TseI	GCWGC	4 cut(s)	252, 559, 868, 1361
Tsp45I	GTSAC	2 cut(s)	476, 1498
TspDTI	ATGAA	9 cut(s)	81, 137, 648, 840, 858, 959, 1058, 1504, 1851
TspGWI	ACGGA	1 cut(s)	622
TspRI	CASTG	4 cut(s)	103, 1591, 1644, 1776
Vha464I	CTTAAG	2 cut(s)	665, 1010
VpaK11BI	GGWCC	2 cut(s)	1406, 1642
XapI	RAATTY	3 cut(s)	274, 422, 689
XceI	RCATGY	2 cut(s)	625, 746
XmiI	GTMKAC	1 cut(s)	388
XmnI	GAANNNNTTC	2 cut(s)	27, 1806
XspI	CTAG	4 cut(s)	297, 315, 1287, 1734
Zsp2I	ATGCAT	1 cut(s)	627

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.