Prupe.5G058600_v2.0.a1

serine threonine-protein kinase cdc7

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
6322970 .. 6329023
6054 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G058600.1

Sequence Viewer

Length: 2709 bp
ATGGAAATGGCGACTCGCCCCACCGACTCAGCTCTCGTTGCCACAGCCATCTCCGACTCAGAGAAGGCCTGGCACCTCCTGGCCCTCCTCTTGTCACTAGGCCGCCCAACTCACCTCTCCGAGCTCGCCTCCCGATGCACGCTGTTCCCGGCGTCGCCTCCCTTGGTCCAATACCTCTGCTCCGTTCCCGGCTCACCTCTCGCCTTATCGGAATCTCTCTGCGTCACGCCGTCTCTGGCTTCCTTTGAAGCTTTCGTCGAGTCCGTTTCGTGTGGCGGTGCTGGTGATGCACTGAGAAGCTACTTGGGGAAGCGAAAGCGGTTCGTTGTGGATTGCGGATTCGGGCCTCTGGCCAAGCGGAGATTAATTGTGGATTTTGGAAATGTGAATGAAGAAATTGGAGCGCCGAAATCGGTTGGATATAGTGCTCCCAAGATACATTGCCGCATGACTGACTACATCAGCAGAAACATAAACATGTTAGATGAAATGAGGCCCAATATAATTGTGCAAACGAATGTCAACAAAACAATAATGGCATGTCAAGCTGATGCAGAACCAGCTAATCCCATCAGCATGTCCGATGCTTTGGTCCTTTACAAAGGAGCTAACTTACATGAGTTAGACTGCACGGGAACAAATTTCCTAGAGAAAGTCGAACGAAGCAATATATCAGCAGAGGTGGATGTGAATATTATTGGTAGATGTAAAGTTACAAATCTTAGAATTGTTGAAGATGAAAGAATTGTGGGAGGTGAGGACGAACAGTTGTTAGTAGGTCCTTCCAGCCCTAATGGAGAAATAGGAAATTTATTTCAGCCATATACTGCTCTTTCTGATATGCTGCCTGAAAGTGACTCCAGACTGAAAAATGCAAATTGTAAAGATACAATGCCTTCGAATAAAAATCAAACAACAAGACATGAGAGCTCTACCATATGTCCAGCTACTGAATTCTCTGTTCCTCGAAAGCAATTGTTGAAACCCTCTGCCAAAATCGCCATTCACAAGGATAAGATGGCTCCAAGACTGCAATCACACTACTTAGAGCATGATCAGGCTGTTGCCACTCCGAAAGAGAACCAGCACCAGAAAATAGATCAAAAGCCAAGCAGCATGGCACAGAAATCAAAGCAGAATTATGATGACAAGCATATCAATGAAAGAAAGAGACGCCATAACTCTATTTCTCCTAAGGATCAACCAGAGAAAAAAGAACTTCCTATTTTTGAATCTTACATTGTAGATGAAGAAGAAGGTTCAGGAGGTTATGGCACTGTTTACAGGGCACAAAGCAAGAATGACGGGACAAAGGTTGCTATTAAATGCCCGCATGCTAATGCTCATAAGCATCATGTTAACAATGAGTTAAGGATGCTGGAAAGGTTTGGGGGCAAAAACTTCGTGATAAAATATGAAGGCTGTATCACGAATGGAAATTCAAATTGCTTTGTATTGCAGCACGTTGAGCATGATAGGCCTGAGGTTTTAAAGAAAGAGATAGATCTTTTTCATCTCCAATGGTATGGCTATTGCTTGTTTAAAGCGCTGGCAAGCCTTCATAAACAGGGCATAGTGCATAGAGATGTTAAACCTGGTAACTTCCTTTTCTCTTGTAAGGCCAGCAAGGGTTACCTCATTGATTTCAATCTTGCCACGGATTTGCATCAGAAGTATGGAACAAGTGGCAAATCAAAAGTTGGATATGATGTAAACAGCCTTGATGAGAAACTTACCAATGCAAAATCTATTCCTCGAACCACGGTTAGGATGTCAACTGTTAAATCTTCAATAAAGGCCAATGGAGAGACCAAAAAAGGTCTCAAACCCACTTTTGATCCGAAGGACTTGAAAAAGAAGGCTTTCAGTCAAGTGAAGGCCTATAATGATTCAGGTAGTTGGAGTGTTATGAAAAGTCAAGGTGCAGATGGCTCAGGCATAACGTCAGCAAAGGATGTGACAAGTGCCAGGACTCCTCCAGCAGAAAGGCTGAGGGAACCTTTGCCATGCCAAGGAAGGAAAGAGCTCATCAGCCTAGTACAGGAAGCAAGGCAGAGTCCAAATCATGAAGCATCAGGTGTTTCAGCTCCTATGAGAAAGAGGGTTCCTGCCCCTCCTGGAAATGAGGATGGCAAGCTTTTCTATATCACTCCAATGCCTCTGCACTCAACTGGCAATGGTATAGGTGGTGCAGGCTTGATTAGAAACAGAGGGGGTGGAAAGCTGAAGAAAGAAGGTCCTTGTGCTGGAACTAAAGGCTTCCGGGCTCCAGAGGTTCTCTTGAGATCCCCACATCAAGGCCCCAAGGTTGATATCTGGTCTGCTGGAGTCACATTACTCTACTTAATAATTGGCAGAACACCCTTTTTTGGAGATCCTGAACAGAACATAAAGGACATAGCAAAGTTGAGGGGCAGTGAAGAATTATGGGAAGTTGCCAAGCTACACGACCGTGAATCTTCATTTCCAGTGGACCTCTATAGTACAGAGTCTTTGCCATCTATTAAACTACAGGATTGGTGTAGAAGGAGCACAAAGAGACCAGACTTCTTTAAGGAAATCCCTAGACCCCTTTTCGATCTAGTGGATAAATGCTTGACAGTGAACCCTAGGGTTAGGATAAGTGCAGAGGAAGCCCTTAGACATGAATTTTTTGCCCCATGCCATGAAGTGCTGAGAAAGCAAAGGCTCCAGAGGCAGGTGTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000082 GO:0000278 GO:0000724 GO:0000725 GO:0000727 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005819 GO:0005856 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006270 GO:0006275 GO:0006281 GO:0006302 GO:0006310 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006897 GO:0006909 GO:0006950 GO:0006974 GO:0007049 GO:0007346 GO:0008150 GO:0008152 GO:0008284 GO:0008360 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010389 GO:0010556 GO:0010557 GO:0010564 GO:0010571 GO:0010604 GO:0010948 GO:0010971 GO:0015630 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019219 GO:0019222 GO:0019538 GO:0022402 GO:0022603 GO:0022604 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0033262 GO:0033554 GO:0034641 GO:0034645 GO:0036211 GO:0042127 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044421 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044446 GO:0044464 GO:0044770 GO:0044772 GO:0044843 GO:0045171 GO:0045740 GO:0045786 GO:0045787 GO:0045931 GO:0045935 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051054 GO:0051128 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065008 GO:0070013 GO:0070316 GO:0070317 GO:0071704 GO:0072686 GO:0080090 GO:0090068 GO:0090304 GO:0090329 GO:0098657 GO:0140096 GO:1901360 GO:1901564 GO:1901576 GO:1901987 GO:1901989 GO:1901990 GO:1901992 GO:1902749 GO:1902751 GO:1903047 GO:2000105 GO:2000112
Pfam Domains
Protein Families

Protein Analysis

903

Amino Acids

100.09

Weight (kDa)

9.09

Isoelectric Point (pI)

44.84

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2707
AarI CACCTGC 1 cut(s) 2689
Acc36I ACCTGC 1 cut(s) 2689
AccB1I GGYRCC 1 cut(s) 72
AciI CCGC 7 cut(s) 103, 276, 319, 336, 358, 445, 1331
AclWI GGATC 4 cut(s) 1206, 1832, 2280, 2369
AcoI YGGCCR 1 cut(s) 351
AcsI RAATTY 5 cut(s) 640, 808, 953, 1438, 2648
AcuI CTGAAG 1 cut(s) 2246
AcyI GRCGYC 2 cut(s) 152, 1174
AfaI GTAC 2 cut(s) 2040, 2485
AfeI AGCGCT 1 cut(s) 1548
AfiI CCNNNNNNNGG 7 cut(s) 1767, 2012, 2041, 2246, 2297, 2369, 2698
AflIII ACRYGT 1 cut(s) 477
AgsI TTSAA 8 cut(s) 248, 734, 982, 1232, 1443, 1648, 1791, 1852
AjnI CCWGG 5 cut(s) 68, 78, 1594, 1967, 2116
AleI CACNNNNGTG 1 cut(s) 2451
Alw21I GWGCWC 5 cut(s) 126, 430, 932, 2028, 2534
Alw26I GTCTC 5 cut(s) 237, 1165, 1802, 1826, 2533
AlwI GGATC 4 cut(s) 1206, 1832, 2280, 2369
AlwNI CAGNNNCTG 1 cut(s) 950
Aor51HI AGCGCT 1 cut(s) 1548
ApeKI GCWGC 3 cut(s) 844, 1113, 1459
ApoI RAATTY 5 cut(s) 640, 808, 953, 1438, 2648
AseI ATTAAT 1 cut(s) 365
Asp700I GAANNNNTTC 1 cut(s) 1862
AspA2I CCTAGG 1 cut(s) 2609
AspLEI GCGC 2 cut(s) 406, 1549
AspS9I GGNCC 9 cut(s) 82, 166, 344, 495, 592, 779, 2237, 2300, 2473
AsuC2I CCSGG 3 cut(s) 149, 189, 2264
AsuHPI GGTGA 4 cut(s) 104, 186, 296, 767
AsuII TTCGAA 1 cut(s) 899
AvaII GGWCC 5 cut(s) 166, 592, 779, 2237, 2473
AvrII CCTAGG 1 cut(s) 2609
AxyI CCTNAGG 2 cut(s) 1194, 1482
BaeGI GKGCMC 1 cut(s) 1291
BalI TGGCCA 1 cut(s) 353
BanI GGYRCC 1 cut(s) 72
BanII GRGCYC 4 cut(s) 126, 932, 2028, 2269
Bbv12I GWGCWC 5 cut(s) 126, 430, 932, 2028, 2534
BbvCI CCTCAGC 1 cut(s) 1991
BbvI GCAGC 3 cut(s) 831, 1125, 1471
BccI CCATC 6 cut(s) 56, 578, 1012, 1922, 2123, 2506
BceAI ACGGC 1 cut(s) 214
BcgI CGANNNNNNTGC 2 cut(s) 1384, 1418
BciT130I CCWGG 5 cut(s) 70, 80, 1596, 1969, 2118
BclI TGATCA 1 cut(s) 1054
BcnI CCSGG 3 cut(s) 149, 189, 2264
BcoDI GTCTC 5 cut(s) 237, 1165, 1802, 1826, 2533
BfaI CTAG 6 cut(s) 98, 647, 2036, 2565, 2582, 2610
BfmI CTRYAG 2 cut(s) 2479, 2510
BfoI RGCGCY 2 cut(s) 407, 1550
BfuAI ACCTGC 1 cut(s) 2689
BglII AGATCT 1 cut(s) 1504
BisI GCNGC 5 cut(s) 103, 445, 845, 1114, 1460
BlnI CCTAGG 1 cut(s) 2609
BlsI GCNGC 5 cut(s) 104, 446, 846, 1115, 1461
Bme1390I CCNGG 8 cut(s) 70, 80, 149, 189, 1596, 1969, 2118, 2264
Bme18I GGWCC 5 cut(s) 166, 592, 779, 2237, 2473
BmgT120I GGNCC 9 cut(s) 82, 166, 344, 495, 592, 779, 2237, 2300, 2473
BmiI GGNNCC 7 cut(s) 74, 1023, 1998, 2106, 2268, 2302, 2690
BmrFI CCNGG 8 cut(s) 70, 80, 149, 189, 1596, 1969, 2118, 2264
BmsI GCATC 8 cut(s) 125, 277, 541, 574, 1360, 1365, 1675, 2081
BplI GAGNNNNNCTC 2 cut(s) 113, 145
BpmI CTGGAG 5 cut(s) 844, 1962, 2253, 2346, 2675
Bpu10I CCTNAGC 2 cut(s) 1933, 1991
Bpu14I TTCGAA 1 cut(s) 899
BpuEI CTTGAG 1 cut(s) 2302
BpuMI CCSGG 3 cut(s) 149, 189, 2264
BsaBI GATNNNNATC 2 cut(s) 1647, 1665
BsaHI GRCGYC 2 cut(s) 152, 1174
BsaI GGTCTC 3 cut(s) 1802, 1826, 2533
BsaJI CCNNGG 6 cut(s) 162, 1656, 1761, 2011, 2304, 2609
BsaXI ACNNNNNCTCC 2 cut(s) 164, 194
Bsc4I CCNNNNNNNGG 7 cut(s) 1767, 2012, 2041, 2246, 2297, 2369, 2698
Bse1I ACTGG 2 cut(s) 2176, 2468
Bse21I CCTNAGG 2 cut(s) 1194, 1482
Bse3DI GCAATG 2 cut(s) 439, 2182
Bse8I GATNNNNATC 2 cut(s) 1647, 1665
BseBI CCWGG 5 cut(s) 70, 80, 1596, 1969, 2118
BseDI CCNNGG 6 cut(s) 162, 1656, 1761, 2011, 2304, 2609
BseGI GGATG 5 cut(s) 691, 1380, 1776, 1960, 2134
BseJI GATNNNNATC 2 cut(s) 1647, 1665
BseLI CCNNNNNNNGG 7 cut(s) 1767, 2012, 2041, 2246, 2297, 2369, 2698
BseMI GCAATG 2 cut(s) 439, 2182
BseMII CTCAG 7 cut(s) 42, 72, 284, 1473, 1947, 1982, 2666
BseNI ACTGG 2 cut(s) 2176, 2468
BseRI GAGGAG 2 cut(s) 77, 1965
BseSI GKGCMC 1 cut(s) 1291
BseXI GCAGC 3 cut(s) 831, 1125, 1471
BsgI GTGCAG 5 cut(s) 613, 1944, 2147, 2211, 2646
Bsh1285I CGRYCG 1 cut(s) 2452
BshNI GGYRCC 1 cut(s) 72
BsiEI CGRYCG 1 cut(s) 2452
BsiHKAI GWGCWC 5 cut(s) 126, 430, 932, 2028, 2534
BsiSI CCGG 3 cut(s) 149, 189, 2263
BslFI GGGAC 1 cut(s) 1321
BslI CCNNNNNNNGG 7 cut(s) 1767, 2012, 2041, 2246, 2297, 2369, 2698
BsmAI GTCTC 5 cut(s) 237, 1165, 1802, 1826, 2533
BsmBI CGTCTC 2 cut(s) 237, 1165
BsmFI GGGAC 1 cut(s) 1321
Bso31I GGTCTC 3 cut(s) 1802, 1826, 2533
Bsp119I TTCGAA 1 cut(s) 899
Bsp1286I GDGCHC 7 cut(s) 126, 430, 932, 1291, 2028, 2269, 2534
Bsp143I GATC 8 cut(s) 1054, 1099, 1198, 1504, 1837, 2285, 2374, 2578
BspACI CCGC 7 cut(s) 103, 276, 319, 336, 358, 445, 1331
BspCNI CTCAG 7 cut(s) 41, 71, 285, 1474, 1946, 1983, 2667
BspHI TCATGA 1 cut(s) 2065
BspLI GGNNCC 7 cut(s) 74, 1023, 1998, 2106, 2268, 2302, 2690
BspMI ACCTGC 1 cut(s) 2689
BspPI GGATC 4 cut(s) 1206, 1832, 2280, 2369
BspT104I TTCGAA 1 cut(s) 899
BspT107I GGYRCC 1 cut(s) 72
BspTNI GGTCTC 3 cut(s) 1802, 1826, 2533
BsrDI GCAATG 2 cut(s) 439, 2182
BsrI ACTGG 2 cut(s) 2176, 2468
BssECI CCNNGG 6 cut(s) 162, 1656, 1761, 2011, 2304, 2609
BssMI GATC 8 cut(s) 1054, 1099, 1198, 1504, 1837, 2285, 2374, 2578
BssNI GRCGYC 2 cut(s) 152, 1174
BssT1I CCWWGG 4 cut(s) 162, 2011, 2304, 2609
Bst2UI CCWGG 5 cut(s) 70, 80, 1596, 1969, 2118
Bst4CI ACNGT 6 cut(s) 768, 1279, 1765, 1780, 2453, 2602
BstACI GRCGYC 2 cut(s) 152, 1174
BstBI TTCGAA 1 cut(s) 899
BstC8I GCNNGC 9 cut(s) 126, 140, 1331, 1335, 1551, 1555, 1624, 2135, 2194
BstDSI CCRYGG 2 cut(s) 1656, 1761
BstEII GGTNACC 1 cut(s) 1631
BstENI CCTNNNNNAGG 1 cut(s) 2039
BstF5I GGATG 5 cut(s) 691, 1380, 1776, 1960, 2134
BstH2I RGCGCY 2 cut(s) 407, 1550
BstHHI GCGC 2 cut(s) 406, 1549
BstKTI GATC 8 cut(s) 1057, 1102, 1201, 1507, 1840, 2288, 2377, 2581
BstMAI GTCTC 5 cut(s) 237, 1165, 1802, 1826, 2533
BstMBI GATC 8 cut(s) 1054, 1099, 1198, 1504, 1837, 2285, 2374, 2578
BstMCI CGRYCG 1 cut(s) 2452
BstNI CCWGG 5 cut(s) 70, 80, 1596, 1969, 2118
BstNSI RCATGY 4 cut(s) 481, 543, 580, 1337
BstPI GGTNACC 1 cut(s) 1631
BstSCI CCNGG 8 cut(s) 68, 78, 147, 187, 1594, 1967, 2116, 2262
BstSFI CTRYAG 2 cut(s) 2479, 2510
BstSLI GKGCMC 1 cut(s) 1291
BstV1I GCAGC 3 cut(s) 831, 1125, 1471
BstX2I RGATCY 3 cut(s) 1504, 2285, 2374
BstXI CCANNNNNNTGG 1 cut(s) 1526
BstYI RGATCY 3 cut(s) 1504, 2285, 2374
Bsu36I CCTNAGG 2 cut(s) 1194, 1482
BtgI CCRYGG 2 cut(s) 1656, 1761
BtsCI GGATG 5 cut(s) 691, 1380, 1776, 1960, 2134
BtsI GCAGTG 1 cut(s) 2422
BtsIMutI CAGTG 5 cut(s) 290, 1275, 2422, 2475, 2607
BveI ACCTGC 1 cut(s) 2689
Cac8I GCNNGC 9 cut(s) 126, 140, 1331, 1335, 1551, 1555, 1624, 2135, 2194
CaiI CAGNNNCTG 1 cut(s) 950
CciI TCATGA 1 cut(s) 2065
CfoI GCGC 2 cut(s) 406, 1549
Cfr13I GGNCC 9 cut(s) 82, 166, 344, 495, 592, 779, 2237, 2300, 2473
CseI GACGC 3 cut(s) 141, 211, 1182
CsiI ACCWGGT 1 cut(s) 1594
Csp6I GTAC 2 cut(s) 2039, 2484
CviQI GTAC 2 cut(s) 2039, 2484
DpnI GATC 8 cut(s) 1056, 1101, 1200, 1506, 1839, 2287, 2376, 2580
DpnII GATC 8 cut(s) 1054, 1099, 1198, 1504, 1837, 2285, 2374, 2578
DraI TTTAAA 2 cut(s) 1491, 1543
EaeI YGGCCR 1 cut(s) 351
Ecl136II GAGCTC 3 cut(s) 124, 930, 2026
Eco130I CCWWGG 4 cut(s) 162, 2011, 2304, 2609
Eco147I AGGCCT 3 cut(s) 68, 1480, 1880
Eco24I GRGCYC 4 cut(s) 126, 932, 2028, 2269
Eco31I GGTCTC 3 cut(s) 1802, 1826, 2533
Eco32I GATATC 1 cut(s) 2314
Eco47I GGWCC 5 cut(s) 166, 592, 779, 2237, 2473
Eco47III AGCGCT 1 cut(s) 1548
Eco53kI GAGCTC 3 cut(s) 124, 930, 2026
Eco57I CTGAAG 1 cut(s) 2246
Eco81I CCTNAGG 2 cut(s) 1194, 1482
Eco91I GGTNACC 1 cut(s) 1631
EcoICRI GAGCTC 3 cut(s) 124, 930, 2026
EcoNI CCTNNNNNAGG 1 cut(s) 2039
EcoO109I RGGNCCY 3 cut(s) 779, 2237, 2300
EcoO65I GGTNACC 1 cut(s) 1631
EcoRI GAATTC 1 cut(s) 953
EcoRII CCWGG 5 cut(s) 68, 78, 1594, 1967, 2116
EcoRV GATATC 1 cut(s) 2314
EcoT14I CCWWGG 4 cut(s) 162, 2011, 2304, 2609
EcoT38I GRGCYC 4 cut(s) 126, 932, 2028, 2269
ErhI CCWWGG 4 cut(s) 162, 2011, 2304, 2609
Esp3I CGTCTC 2 cut(s) 237, 1165
FaqI GGGAC 1 cut(s) 1321
FauI CCCGC 1 cut(s) 1338
FauNDI CATATG 1 cut(s) 938
FbaI TGATCA 1 cut(s) 1054
Fnu4HI GCNGC 5 cut(s) 103, 445, 845, 1114, 1460
FokI GGATG 5 cut(s) 698, 1387, 1783, 1967, 2141
FriOI GRGCYC 4 cut(s) 126, 932, 2028, 2269
Fsp4HI GCNGC 5 cut(s) 103, 445, 845, 1114, 1460
FspBI CTAG 6 cut(s) 98, 647, 2036, 2565, 2582, 2610
GlaI GCGC 2 cut(s) 405, 1548
GluI GCNGC 5 cut(s) 103, 445, 845, 1114, 1460
GsuI CTGGAG 5 cut(s) 844, 1962, 2253, 2346, 2675
HaeII RGCGCY 2 cut(s) 407, 1550
HapII CCGG 3 cut(s) 149, 189, 2263
HgaI GACGC 3 cut(s) 141, 211, 1182
HhaI GCGC 2 cut(s) 406, 1549
Hin1I GRCGYC 2 cut(s) 152, 1174
Hin6I GCGC 2 cut(s) 404, 1547
HinP1I GCGC 2 cut(s) 404, 1547
HincII GTYRAC 3 cut(s) 523, 1360, 1776
HindII GTYRAC 3 cut(s) 523, 1360, 1776
HindIII AAGCTT 2 cut(s) 249, 2135
HpaI GTTAAC 1 cut(s) 1360
HpaII CCGG 3 cut(s) 149, 189, 2263
HphI GGTGA 4 cut(s) 104, 186, 296, 767
Hpy166II GTNNAC 7 cut(s) 523, 1282, 1360, 1714, 1776, 2473, 2605
Hpy188I TCNGA 9 cut(s) 55, 61, 121, 211, 583, 838, 1074, 1671, 1842
Hpy8I GTNNAC 7 cut(s) 523, 1282, 1360, 1714, 1776, 2473, 2605
Hpy99I CGWCG 2 cut(s) 157, 260
HpyCH4III ACNGT 6 cut(s) 768, 1279, 1765, 1780, 2453, 2602
HpyCH4IV ACGT 2 cut(s) 1464, 1943
HpySE526I ACGT 2 cut(s) 1464, 1943
Hsp92I GRCGYC 2 cut(s) 152, 1174
HspAI GCGC 2 cut(s) 404, 1547
Ksp22I TGATCA 1 cut(s) 1054
KspAI GTTAAC 1 cut(s) 1360
Kzo9I GATC 8 cut(s) 1054, 1099, 1198, 1504, 1837, 2285, 2374, 2578
LmnI GCTCC 9 cut(s) 185, 401, 433, 605, 1027, 2092, 2272, 2529, 2694
Lsp1109I GCAGC 3 cut(s) 831, 1125, 1471
LweI GCATC 8 cut(s) 125, 277, 541, 574, 1360, 1365, 1675, 2081
MabI ACCWGGT 1 cut(s) 1594
MaeI CTAG 6 cut(s) 98, 647, 2036, 2565, 2582, 2610
MaeII ACGT 2 cut(s) 1464, 1943
MaeIII GTNAC 8 cut(s) 93, 223, 712, 854, 1598, 1631, 1957, 2329
MalI GATC 8 cut(s) 1056, 1101, 1200, 1506, 1839, 2287, 2376, 2580
MboI GATC 8 cut(s) 1054, 1099, 1198, 1504, 1837, 2285, 2374, 2578
MboII GAAGA 8 cut(s) 404, 746, 1262, 1265, 1779, 2239, 2432, 2451
MfeI CAATTG 1 cut(s) 974
MflI RGATCY 3 cut(s) 1504, 2285, 2374
MhlI GDGCHC 7 cut(s) 126, 430, 932, 1291, 2028, 2269, 2534
MlsI TGGCCA 1 cut(s) 353
MluNI TGGCCA 1 cut(s) 353
MlyI GAGTC 9 cut(s) 7, 20, 50, 269, 851, 1966, 2065, 2337, 2498
MmeI TCCRAC 4 cut(s) 78, 397, 1681, 1880
Mox20I TGGCCA 1 cut(s) 353
MroXI GAANNNNTTC 1 cut(s) 1862
MscI TGGCCA 1 cut(s) 353
MslI CAYNNNNRTG 7 cut(s) 476, 575, 1158, 1338, 1584, 2153, 2451
Msp20I TGGCCA 1 cut(s) 353
MspI CCGG 3 cut(s) 149, 189, 2263
MspR9I CCNGG 8 cut(s) 70, 80, 149, 189, 1596, 1969, 2118, 2264
MunI CAATTG 1 cut(s) 974
MvaI CCWGG 5 cut(s) 70, 80, 1596, 1969, 2118
NciI CCSGG 3 cut(s) 149, 189, 2264
NdeI CATATG 1 cut(s) 938
NdeII GATC 8 cut(s) 1054, 1099, 1198, 1504, 1837, 2285, 2374, 2578
NlaIV GGNNCC 7 cut(s) 74, 1023, 1998, 2106, 2268, 2302, 2690
NmuCI GTSAC 5 cut(s) 93, 223, 854, 1957, 2329
NspI RCATGY 4 cut(s) 481, 543, 580, 1337
NspV TTCGAA 1 cut(s) 899
OliI CACNNNNGTG 1 cut(s) 2451
PaeI GCATGC 1 cut(s) 1337
PagI TCATGA 1 cut(s) 2065
PaqCI CACCTGC 1 cut(s) 2689
PceI AGGCCT 3 cut(s) 68, 1480, 1880
PciI ACATGT 1 cut(s) 477
PcsI WCGNNNNNNNCGW 1 cut(s) 261
PdmI GAANNNNTTC 1 cut(s) 1862
PfeI GAWTC 5 cut(s) 212, 339, 1232, 1889, 2456
PfoI TCCNGGA 1 cut(s) 2116
PkrI GCNGC 5 cut(s) 104, 446, 846, 1115, 1461
PleI GAGTC 9 cut(s) 7, 20, 50, 268, 851, 1966, 2064, 2336, 2497
PpsI GAGTC 9 cut(s) 7, 20, 50, 268, 851, 1966, 2064, 2336, 2497
PpuMI RGGWCCY 2 cut(s) 779, 2237
PscI ACATGT 1 cut(s) 477
PshBI ATTAAT 1 cut(s) 365
PsiI TTATAA 1 cut(s) 2707
Psp124BI GAGCTC 3 cut(s) 126, 932, 2028
Psp5II RGGWCCY 2 cut(s) 779, 2237
Psp6I CCWGG 5 cut(s) 68, 78, 1594, 1967, 2116
PspEI GGTNACC 1 cut(s) 1631
PspGI CCWGG 5 cut(s) 68, 78, 1594, 1967, 2116
PspN4I GGNNCC 7 cut(s) 74, 1023, 1998, 2106, 2268, 2302, 2690
PspPI GGNCC 9 cut(s) 82, 166, 344, 495, 592, 779, 2237, 2300, 2473
PspPPI RGGWCCY 2 cut(s) 779, 2237
PstNI CAGNNNCTG 1 cut(s) 950
PsuI RGATCY 3 cut(s) 1504, 2285, 2374
RsaI GTAC 2 cut(s) 2040, 2485
RsaNI GTAC 2 cut(s) 2039, 2484
RseI CAYNNNNRTG 7 cut(s) 476, 575, 1158, 1338, 1584, 2153, 2451
SacI GAGCTC 3 cut(s) 126, 932, 2028
SatI GCNGC 5 cut(s) 103, 445, 845, 1114, 1460
Sau3AI GATC 8 cut(s) 1054, 1099, 1198, 1504, 1837, 2285, 2374, 2578
Sau96I GGNCC 9 cut(s) 82, 166, 344, 495, 592, 779, 2237, 2300, 2473
SchI GAGTC 9 cut(s) 7, 20, 50, 269, 851, 1966, 2065, 2337, 2498
ScrFI CCNGG 8 cut(s) 70, 80, 149, 189, 1596, 1969, 2118, 2264
SduI GDGCHC 7 cut(s) 126, 430, 932, 1291, 2028, 2269, 2534
SexAI ACCWGGT 1 cut(s) 1594
SfaNI GCATC 8 cut(s) 125, 277, 541, 574, 1360, 1365, 1675, 2081
SfcI CTRYAG 2 cut(s) 2479, 2510
SfuI TTCGAA 1 cut(s) 899
SinI GGWCC 5 cut(s) 166, 592, 779, 2237, 2473
SmiMI CAYNNNNRTG 7 cut(s) 476, 575, 1158, 1338, 1584, 2153, 2451
SmlI CTYRAG 1 cut(s) 2281
SmoI CTYRAG 1 cut(s) 2281
SphI GCATGC 1 cut(s) 1337
SseBI AGGCCT 3 cut(s) 68, 1480, 1880
SsiI CCGC 7 cut(s) 103, 276, 319, 336, 358, 445, 1331
SspI AATATT 1 cut(s) 694
SspMI CTAG 6 cut(s) 98, 647, 2036, 2565, 2582, 2610
SstI GAGCTC 3 cut(s) 126, 932, 2028
StuI AGGCCT 3 cut(s) 68, 1480, 1880
StyD4I CCNGG 8 cut(s) 68, 78, 147, 187, 1594, 1967, 2116, 2262
StyI CCWWGG 4 cut(s) 162, 2011, 2304, 2609
TaaI ACNGT 6 cut(s) 768, 1279, 1765, 1780, 2453, 2602
TaiI ACGT 2 cut(s) 1467, 1946
TaqI TCGA 6 cut(s) 258, 657, 899, 967, 1756, 2577
TatI WGTACW 2 cut(s) 2038, 2483
TauI GCSGC 2 cut(s) 105, 447
TfiI GAWTC 5 cut(s) 212, 339, 1232, 1889, 2456
TscAI CASTG 5 cut(s) 297, 1282, 2422, 2475, 2607
TseFI GTSAC 5 cut(s) 93, 223, 854, 1957, 2329
TseI GCWGC 3 cut(s) 844, 1113, 1459
Tsp45I GTSAC 5 cut(s) 93, 223, 854, 1957, 2329
TspGWI ACGGA 3 cut(s) 172, 253, 1673
TspRI CASTG 5 cut(s) 297, 1282, 2422, 2475, 2607
VpaK11BI GGWCC 5 cut(s) 166, 592, 779, 2237, 2473
VspI ATTAAT 1 cut(s) 365
XagI CCTNNNNNAGG 1 cut(s) 2039
XapI RAATTY 5 cut(s) 640, 808, 953, 1438, 2648
XceI RCATGY 4 cut(s) 481, 543, 580, 1337
XmaJI CCTAGG 1 cut(s) 2609
XmnI GAANNNNTTC 1 cut(s) 1862
XspI CTAG 6 cut(s) 98, 647, 2036, 2565, 2582, 2610
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.