Rroxscaffold_3G00252510

serine threonine-protein kinase cdc7

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0002088
Physical Location & Seq
Reverse (-)
46535625 .. 46542146
6522 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00252510.1

Sequence Viewer

Length: 2232 bp
ATGACTGACTACCTCAGCAGAAAAATAAATATGCTACCAAGTGATGTGGCTGTGGGGTTGAATAAACCGATGTTCAGTTCTCCATTATTTATTGAATATAGTGCTGAGCCATCCAGTGGTGGAGTGAAGAACATTGATAATGTTGAAGATCAAATGAAGACCAACCTAACTCTGCCAAGGAACATTAACAAAACAGTTATGGCCTGTGTAGATGATTTAGAGCCAACTGTTCCAACAGTGTCAGAAGATTTAGTACTTTATGAAGAAGCTAACATGCACGAGATACATAGCTTGGCCAAATCTTACCTAGAGAAAAGTAAAGAAAGCATTTTGTCACCTGTGCTGGATGAGAATGTTAGCGGTAGTTGTAAAGTTGCAAATTCTACAATCCTTGAAGATGAAAGAATTGTCGCAGATTCGGAGGAAGATTTGTTAGTAGATCCAGGCAACCGCAATGGTGAAAGAGAAAACATGTCCCACCCACAAACTGCTGTCTCTGATAAGCTGCCTGGAATTGACTCCAGAAGATTAGAAGAGGAGGACTATGAAGATACAATACCTTTGAGAAAAAGGCTTATAAGAATACTTGAGACCCGAGTCAAACTTCCAGTTACTGATTTCTCTGTTGCTGAAAAGCAATTGTTGCAGCCATTTGAAAAGGTGTCCAAGGATTTAGTACTCTATGAAAGAGCTAACATGCATGAGGAAACCAAAGAAAGCATAATCTCACCAGCTTTGGATGAGAGTGTTAGCGGTGGTCGTAAAGTTACAAACGCTACAATTCTTGAAGATGTAAGAACTGTGGGAAATCATGAGGAAGAACTGTTCATAGATCCTGGCAACCCTAATGGAGAGACTGAGAATCTATCACAGCCATTTGCTGCTGTTTCTGATAAGCAGCCTGGAACCGGCTCCAGAAGCTTAAAAGAGCAGGATTTTGAAGATACGATACCATTGCATAAAGAGCGACATGAGAACCAAACCATTTGTGTGGCCACTGATCTCTCCTCTCCTAAGGTGTCCAATGATTTAGTACTCTATGAAGGAGCTGACATGCATGAGATAGATATCCAGGGAAACTCTTACCAAGAGAAAATCAAAGAAAGCATAATGCCAGCTTTGGATGAGAGTGTTAGTGGTAACTGTAAAGGTACAAATGCTACAATCCTTGAAGATAAAATAATTGTGGGAGATGCAGAGGAAGGATTTTTAGTAAATCCTGGCAACCCTATTGGAGAAACAGAAATTCTATACCAGCCATATACTAATGTTTCTGATAAGCTGGCTGGAATTGATTTCAGAAGATTGAATGAGGATGATTATGAAGATACAACACCTGTGAATAAAAGTCTTATGACAAGAAATGAGACCCAAACCACCTGTCCTGCTACTGAATTCTATGTTCCTCAAAAGCAGTTGTTGAAGTCCTCTGCAACAATGAAGGCCATGAACAAGGATAAAATATCTTCAAGACTGCAATCTCTATATAGTTGTAGTCTAGAGCAAGATCAGACTGTTGCCACTCCCAAAGTGAACCTCCACCATAAAATGGATCAGAAGACAAATAGCATGGTACACAAATCAAAGCAGAATTGTGGTGACATGCATATTAATGAAAGAAAGAGACGATACAAATCTATTTCCTCTAAGGATCAGCCAGAGAAAAAAGAACTTCCAAATTTTGATTCTTATATGGTAGAAGAAGAAGAAGGTTCAGGTGGTTATGGCACTGTTTACAGGGCGAGGAGTAAGAATGACAGGACAAGGGGAATCGTACATAGAGATGTTAAACCGGGCAATTTCCTTTTCTCTCGTAAGGCCAACAAGGGTTACCTTATTGATTTCAATCTATCCATGGACTTGCATCAGAAGTATGGAAATAATAGTAAGCTTTCATCTCCCTTCATGAACATCAAGGACATAGCAAAGCTGAGAGGCAGTGAAGATTTATGGGAAGTTGCCAAGCTACACGACCGTGAATCCTCATTTCCAGTGGAGCTCTATAGTACAGATTGTTTGCCCTCTATTAAACTAAAGGAGTGGTGTAGAATGAACACAAAGAGACCGGACTTCTTTGAGCAAATCCCAAGACCCCTTTTCGATCTTGTGGATAAATGCTTGATGGTGAACCCTAGGGTTAGATTGAGTGCAGAGGAAGCGCTTAAACATGAGTTTTTCGCTCCATGCCATGAAGAACTGAGAAAGCACAGGCTTCAAAGGCAGGTATTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000082 GO:0000278 GO:0000724 GO:0000725 GO:0000727 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005819 GO:0005856 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006270 GO:0006275 GO:0006281 GO:0006302 GO:0006310 GO:0006464 GO:0006468 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006897 GO:0006909 GO:0006950 GO:0006974 GO:0007049 GO:0007346 GO:0008150 GO:0008152 GO:0008284 GO:0008360 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010389 GO:0010556 GO:0010557 GO:0010564 GO:0010571 GO:0010604 GO:0010948 GO:0010971 GO:0015630 GO:0016192 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018105 GO:0018193 GO:0018209 GO:0019219 GO:0019222 GO:0019538 GO:0022402 GO:0022603 GO:0022604 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031974 GO:0031981 GO:0033262 GO:0033554 GO:0034641 GO:0034645 GO:0036211 GO:0042127 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044421 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044446 GO:0044464 GO:0044770 GO:0044772 GO:0044843 GO:0045171 GO:0045740 GO:0045786 GO:0045787 GO:0045931 GO:0045935 GO:0046483 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051052 GO:0051054 GO:0051128 GO:0051171 GO:0051173 GO:0051179 GO:0051234 GO:0051716 GO:0051726 GO:0060255 GO:0065007 GO:0065008 GO:0070013 GO:0070316 GO:0070317 GO:0071704 GO:0072686 GO:0080090 GO:0090068 GO:0090304 GO:0090329 GO:0098657 GO:0140096 GO:1901360 GO:1901564 GO:1901576 GO:1901987 GO:1901989 GO:1901990 GO:1901992 GO:1902749 GO:1902751 GO:1903047 GO:2000105 GO:2000112
KEGG Pathways
Metabolic & Signaling
ko04110 ko04111 ko04113 map04110 map04111 map04113
Pfam Domains
Protein Families
Pkinase

Protein Analysis

743

Amino Acids

84.22

Weight (kDa)

5.22

Isoelectric Point (pI)

52.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 589 - 726 1.7e-10 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 578
Acc36I ACCTGC 1 cut(s) 2212
AccB7I CCANNNNNTGG 2 cut(s) 116, 1549
AciI CCGC 3 cut(s) 360, 451, 753
AclWI GGATC 4 cut(s) 434, 827, 1560, 1659
AcoI YGGCCR 2 cut(s) 294, 993
AcsI RAATTY 4 cut(s) 379, 1245, 1394, 1678
AfaI GTAC 7 cut(s) 255, 678, 1035, 1153, 1575, 1776, 2008
AfeI AGCGCT 1 cut(s) 2160
AfiI CCNNNNNNNGG 3 cut(s) 116, 908, 1549
AflIII ACRYGT 1 cut(s) 471
AjnI CCWGG 6 cut(s) 442, 508, 835, 901, 1071, 1219
AjuI GAANNNNNNNTTGG 2 cut(s) 1669, 1701
AleI CACNNNNGTG 1 cut(s) 1974
AloI GAACNNNNNNTCC 2 cut(s) 809, 841
Alw21I GWGCWC 1 cut(s) 2001
Alw26I GTCTC 6 cut(s) 499, 584, 848, 1361, 1618, 2056
AlwI GGATC 4 cut(s) 434, 827, 1560, 1659
AlwNI CAGNNNCTG 1 cut(s) 614
Ama87I CYCGRG 1 cut(s) 594
Aor51HI AGCGCT 1 cut(s) 2160
AoxI GGCC 5 cut(s) 201, 294, 993, 1443, 1818
ApeKI GCWGC 4 cut(s) 505, 646, 881, 898
ApoI RAATTY 4 cut(s) 379, 1245, 1394, 1678
ArsI GACNNNNNNTTYG 2 cut(s) 1366, 1398
AseI ATTAAT 1 cut(s) 1611
AspA2I CCTAGG 1 cut(s) 2132
AspLEI GCGC 1 cut(s) 2161
AsuC2I CCSGG 1 cut(s) 1794
AsuHPI GGTGA 5 cut(s) 327, 470, 720, 1610, 2137
AvaI CYCGRG 1 cut(s) 594
AvrII CCTAGG 1 cut(s) 2132
AxyI CCTNAGG 1 cut(s) 1014
BalI TGGCCA 2 cut(s) 296, 995
BanII GRGCYC 1 cut(s) 2001
BarI GAAGNNNNNNTAC 6 cut(s) 237, 269, 540, 572, 933, 965
BauI CACGAG 1 cut(s) 278
BbsI GAAGAC 2 cut(s) 164, 1565
Bbv12I GWGCWC 1 cut(s) 2001
BbvCI CCTCAGC 1 cut(s) 14
BbvI GCAGC 4 cut(s) 492, 658, 868, 910
BccI CCATC 2 cut(s) 118, 2116
BcgI CGANNNNNNTGC 2 cut(s) 937, 971
BciT130I CCWGG 6 cut(s) 444, 510, 837, 903, 1073, 1221
BcnI CCSGG 1 cut(s) 1794
BcoDI GTCTC 6 cut(s) 499, 584, 848, 1361, 1618, 2056
BfaI CTAG 3 cut(s) 308, 1499, 2133
BfmI CTRYAG 1 cut(s) 2002
BfoI RGCGCY 1 cut(s) 2162
BfuAI ACCTGC 1 cut(s) 2212
BisI GCNGC 4 cut(s) 506, 647, 882, 899
BlnI CCTAGG 1 cut(s) 2132
BlpI GCTNAGC 1 cut(s) 105
BlsI GCNGC 4 cut(s) 507, 648, 883, 900
BmcAI AGTACT 3 cut(s) 255, 678, 1035
Bme1390I CCNGG 7 cut(s) 444, 510, 837, 903, 1073, 1221, 1794
BmeT110I CYCGRG 1 cut(s) 594
BmiI GGNNCC 2 cut(s) 907, 913
BmrFI CCNGG 7 cut(s) 444, 510, 837, 903, 1073, 1221, 1794
BmsI GCATC 2 cut(s) 1183, 1873
BoxI GACNNNNGTC 1 cut(s) 596
BpiI GAAGAC 2 cut(s) 164, 1565
BpmI CTGGAG 2 cut(s) 505, 898
Bpu10I CCTNAGC 1 cut(s) 14
Bpu1102I GCTNAGC 1 cut(s) 105
BpuEI CTTGAG 1 cut(s) 608
BpuMI CCSGG 1 cut(s) 1794
BsaBI GATNNNNATC 3 cut(s) 1067, 1633, 1845
BsaI GGTCTC 3 cut(s) 584, 1361, 2056
BsaJI CCNNGG 5 cut(s) 176, 666, 1072, 1854, 2132
BsaWI WCCGGW 1 cut(s) 2065
Bsc4I CCNNNNNNNGG 3 cut(s) 116, 908, 1549
Bse118I RCCGGY 1 cut(s) 908
Bse1I ACTGG 3 cut(s) 114, 608, 1991
Bse21I CCTNAGG 1 cut(s) 1014
Bse3DI GCAATG 2 cut(s) 460, 953
Bse8I GATNNNNATC 3 cut(s) 1067, 1633, 1845
BseBI CCWGG 6 cut(s) 444, 510, 837, 903, 1073, 1221
BseDI CCNNGG 5 cut(s) 176, 666, 1072, 1854, 2132
BseGI GGATG 5 cut(s) 110, 352, 745, 1129, 1321
BseJI GATNNNNATC 3 cut(s) 1067, 1633, 1845
BseLI CCNNNNNNNGG 3 cut(s) 116, 908, 1549
BseMI GCAATG 2 cut(s) 460, 953
BseMII CTCAG 5 cut(s) 28, 96, 849, 1922, 2189
BseNI ACTGG 3 cut(s) 114, 608, 1991
BseRI GAGGAG 3 cut(s) 551, 997, 1759
BseXI GCAGC 4 cut(s) 492, 658, 868, 910
BsgI GTGCAG 1 cut(s) 2169
Bsh1285I CGRYCG 1 cut(s) 1975
BshFI GGCC 5 cut(s) 203, 296, 995, 1445, 1820
BsiEI CGRYCG 1 cut(s) 1975
BsiHKAI GWGCWC 1 cut(s) 2001
BsiHKCI CYCGRG 1 cut(s) 594
BsiSI CCGG 3 cut(s) 909, 1793, 2066
BslFI GGGAC 1 cut(s) 460
BslI CCNNNNNNNGG 3 cut(s) 116, 908, 1549
BsmAI GTCTC 6 cut(s) 499, 584, 848, 1361, 1618, 2056
BsmBI CGTCTC 1 cut(s) 1618
BsmFI GGGAC 1 cut(s) 460
BsnI GGCC 5 cut(s) 203, 296, 995, 1445, 1820
Bso31I GGTCTC 3 cut(s) 584, 1361, 2056
BsoBI CYCGRG 1 cut(s) 594
Bsp1286I GDGCHC 1 cut(s) 2001
Bsp143I GATC 8 cut(s) 148, 439, 832, 1000, 1507, 1552, 1651, 2101
Bsp1720I GCTNAGC 1 cut(s) 105
Bsp19I CCATGG 1 cut(s) 1854
BspACI CCGC 3 cut(s) 360, 451, 753
BspANI GGCC 5 cut(s) 203, 296, 995, 1445, 1820
BspCNI CTCAG 5 cut(s) 27, 97, 850, 1923, 2190
BspHI TCATGA 2 cut(s) 811, 1905
BspLI GGNNCC 2 cut(s) 907, 913
BspMI ACCTGC 1 cut(s) 2212
BspPI GGATC 4 cut(s) 434, 827, 1560, 1659
BspTNI GGTCTC 3 cut(s) 584, 1361, 2056
BsrDI GCAATG 2 cut(s) 460, 953
BsrFI RCCGGY 1 cut(s) 908
BsrI ACTGG 3 cut(s) 114, 608, 1991
BssAI RCCGGY 1 cut(s) 908
BssECI CCNNGG 5 cut(s) 176, 666, 1072, 1854, 2132
BssMI GATC 8 cut(s) 148, 439, 832, 1000, 1507, 1552, 1651, 2101
BssSI CACGAG 1 cut(s) 278
BssT1I CCWWGG 4 cut(s) 176, 666, 1854, 2132
Bst2BI CACGAG 1 cut(s) 278
Bst2UI CCWGG 6 cut(s) 444, 510, 837, 903, 1073, 1221
Bst4CI ACNGT 9 cut(s) 196, 229, 238, 802, 825, 1145, 1516, 1732, 1976
Bst6I CTCTTC 1 cut(s) 528
BstAPI GCANNNNNTGC 1 cut(s) 643
BstC8I GCNNGC 2 cut(s) 1116, 1284
BstDEI CTNAG 7 cut(s) 14, 105, 858, 1014, 1647, 1931, 2198
BstDSI CCRYGG 1 cut(s) 1854
BstEII GGTNACC 1 cut(s) 1829
BstF5I GGATG 5 cut(s) 110, 352, 745, 1129, 1321
BstH2I RGCGCY 1 cut(s) 2162
BstHHI GCGC 1 cut(s) 2161
BstKTI GATC 8 cut(s) 151, 442, 835, 1003, 1510, 1555, 1654, 2104
BstMAI GTCTC 6 cut(s) 499, 584, 848, 1361, 1618, 2056
BstMBI GATC 8 cut(s) 148, 439, 832, 1000, 1507, 1552, 1651, 2101
BstMCI CGRYCG 1 cut(s) 1975
BstMWI GCNNNNNNNGC 5 cut(s) 643, 918, 964, 2156, 2218
BstNI CCWGG 6 cut(s) 444, 510, 837, 903, 1073, 1221
BstNSI RCATGY 5 cut(s) 277, 475, 700, 1057, 1606
BstPAI GACNNNNGTC 1 cut(s) 596
BstPI GGTNACC 1 cut(s) 1829
BstSCI CCNGG 7 cut(s) 442, 508, 835, 901, 1071, 1219, 1792
BstSFI CTRYAG 1 cut(s) 2002
BstV1I GCAGC 4 cut(s) 492, 658, 868, 910
BstV2I GAAGAC 2 cut(s) 164, 1565
BstX2I RGATCY 2 cut(s) 439, 832
BstXI CCANNNNNNTGG 1 cut(s) 991
BstYI RGATCY 2 cut(s) 439, 832
Bsu36I CCTNAGG 1 cut(s) 1014
BsuRI GGCC 5 cut(s) 203, 296, 995, 1445, 1820
BtgI CCRYGG 1 cut(s) 1854
BtsCI GGATG 5 cut(s) 110, 352, 745, 1129, 1321
BtsI GCAGTG 1 cut(s) 1945
BtsIMutI CAGTG 6 cut(s) 121, 243, 996, 1728, 1945, 1998
BveI ACCTGC 1 cut(s) 2212
Cac8I GCNNGC 2 cut(s) 1116, 1284
CaiI CAGNNNCTG 1 cut(s) 614
CciI TCATGA 2 cut(s) 811, 1905
CfoI GCGC 1 cut(s) 2161
Cfr10I RCCGGY 1 cut(s) 908
Csp6I GTAC 7 cut(s) 254, 677, 1034, 1152, 1574, 1775, 2007
CspCI CAANNNNNGTGG 2 cut(s) 27, 62
CviQI GTAC 7 cut(s) 254, 677, 1034, 1152, 1574, 1775, 2007
DdeI CTNAG 7 cut(s) 14, 105, 858, 1014, 1647, 1931, 2198
DpnI GATC 8 cut(s) 150, 441, 834, 1002, 1509, 1554, 1653, 2103
DpnII GATC 8 cut(s) 148, 439, 832, 1000, 1507, 1552, 1651, 2101
EaeI YGGCCR 2 cut(s) 294, 993
Eam1104I CTCTTC 1 cut(s) 528
EarI CTCTTC 1 cut(s) 528
Ecl136II GAGCTC 1 cut(s) 1999
Eco130I CCWWGG 4 cut(s) 176, 666, 1854, 2132
Eco24I GRGCYC 1 cut(s) 2001
Eco31I GGTCTC 3 cut(s) 584, 1361, 2056
Eco32I GATATC 1 cut(s) 1069
Eco47III AGCGCT 1 cut(s) 2160
Eco53kI GAGCTC 1 cut(s) 1999
Eco81I CCTNAGG 1 cut(s) 1014
Eco88I CYCGRG 1 cut(s) 594
Eco91I GGTNACC 1 cut(s) 1829
EcoICRI GAGCTC 1 cut(s) 1999
EcoO65I GGTNACC 1 cut(s) 1829
EcoRI GAATTC 1 cut(s) 1394
EcoRII CCWGG 6 cut(s) 442, 508, 835, 901, 1071, 1219
EcoRV GATATC 1 cut(s) 1069
EcoT14I CCWWGG 4 cut(s) 176, 666, 1854, 2132
EcoT22I ATGCAT 3 cut(s) 702, 1059, 1608
EcoT38I GRGCYC 1 cut(s) 2001
ErhI CCWWGG 4 cut(s) 176, 666, 1854, 2132
Esp3I CGTCTC 1 cut(s) 1618
FaqI GGGAC 1 cut(s) 460
Fnu4HI GCNGC 4 cut(s) 506, 647, 882, 899
FokI GGATG 5 cut(s) 97, 359, 752, 1136, 1328
FriOI GRGCYC 1 cut(s) 2001
Fsp4HI GCNGC 4 cut(s) 506, 647, 882, 899
FspBI CTAG 3 cut(s) 308, 1499, 2133
GlaI GCGC 1 cut(s) 2160
GluI GCNGC 4 cut(s) 506, 647, 882, 899
GsuI CTGGAG 2 cut(s) 505, 898
HaeII RGCGCY 1 cut(s) 2162
HaeIII GGCC 5 cut(s) 203, 296, 995, 1445, 1820
HapII CCGG 3 cut(s) 909, 1793, 2066
HhaI GCGC 1 cut(s) 2161
Hin6I GCGC 1 cut(s) 2159
HinP1I GCGC 1 cut(s) 2159
HindIII AAGCTT 2 cut(s) 919, 1889
HinfI GANTC 7 cut(s) 416, 518, 597, 862, 1685, 1770, 1979
HpaII CCGG 3 cut(s) 909, 1793, 2066
HphI GGTGA 5 cut(s) 327, 470, 720, 1610, 2137
Hpy166II GTNNAC 4 cut(s) 1534, 1576, 1735, 2128
Hpy188I TCNGA 9 cut(s) 244, 421, 499, 892, 1276, 1301, 1512, 1557, 1869
Hpy188III TCNNGA 7 cut(s) 522, 785, 812, 915, 1470, 1499, 1906
Hpy8I GTNNAC 4 cut(s) 1534, 1576, 1735, 2128
HpyAV CCTTC 5 cut(s) 1037, 1196, 1435, 1703, 1912
HpyCH4III ACNGT 9 cut(s) 196, 229, 238, 802, 825, 1145, 1516, 1732, 1976
HpyF10VI GCNNNNNNNGC 5 cut(s) 643, 918, 964, 2156, 2218
HpyF3I CTNAG 7 cut(s) 14, 105, 858, 1014, 1647, 1931, 2198
HspAI GCGC 1 cut(s) 2159
Kzo9I GATC 8 cut(s) 148, 439, 832, 1000, 1507, 1552, 1651, 2101
LmnI GCTCC 4 cut(s) 917, 1046, 1996, 2185
Lsp1109I GCAGC 4 cut(s) 492, 658, 868, 910
LweI GCATC 2 cut(s) 1183, 1873
MaeI CTAG 3 cut(s) 308, 1499, 2133
MaeIII GTNAC 6 cut(s) 333, 610, 766, 1139, 1598, 1829
MalI GATC 8 cut(s) 150, 441, 834, 1002, 1509, 1554, 1653, 2103
MboI GATC 8 cut(s) 148, 439, 832, 1000, 1507, 1552, 1651, 2101
MfeI CAATTG 1 cut(s) 638
MflI RGATCY 2 cut(s) 439, 832
MhlI GDGCHC 1 cut(s) 2001
MlsI TGGCCA 2 cut(s) 296, 995
MluNI TGGCCA 2 cut(s) 296, 995
MlyI GAGTC 2 cut(s) 512, 606
MmeI TCCRAC 1 cut(s) 257
Mox20I TGGCCA 2 cut(s) 296, 995
Mph1103I ATGCAT 3 cut(s) 702, 1059, 1608
MscI TGGCCA 2 cut(s) 296, 995
MseI TTAA 6 cut(s) 186, 923, 1611, 1788, 2028, 2163
MslI CAYNNNNRTG 4 cut(s) 989, 1611, 1782, 1974
Msp20I TGGCCA 2 cut(s) 296, 995
MspI CCGG 3 cut(s) 909, 1793, 2066
MspR9I CCNGG 7 cut(s) 444, 510, 837, 903, 1073, 1221, 1794
MunI CAATTG 1 cut(s) 638
MvaI CCWGG 6 cut(s) 444, 510, 837, 903, 1073, 1221
MwoI GCNNNNNNNGC 5 cut(s) 643, 918, 964, 2156, 2218
NciI CCSGG 1 cut(s) 1794
NcoI CCATGG 1 cut(s) 1854
NdeII GATC 8 cut(s) 148, 439, 832, 1000, 1507, 1552, 1651, 2101
NlaIV GGNNCC 2 cut(s) 907, 913
NmuCI GTSAC 2 cut(s) 333, 1598
NsiI ATGCAT 3 cut(s) 702, 1059, 1608
NspI RCATGY 5 cut(s) 277, 475, 700, 1057, 1606
OliI CACNNNNGTG 1 cut(s) 1974
PagI TCATGA 2 cut(s) 811, 1905
PciI ACATGT 1 cut(s) 471
PfeI GAWTC 5 cut(s) 416, 862, 1685, 1770, 1979
PflMI CCANNNNNTGG 2 cut(s) 116, 1549
PkrI GCNGC 4 cut(s) 507, 648, 883, 900
PleI GAGTC 2 cut(s) 512, 605
PpsI GAGTC 2 cut(s) 512, 605
PscI ACATGT 1 cut(s) 471
PshAI GACNNNNGTC 1 cut(s) 596
PshBI ATTAAT 1 cut(s) 1611
PsiI TTATAA 1 cut(s) 578
Psp124BI GAGCTC 1 cut(s) 2001
Psp6I CCWGG 6 cut(s) 442, 508, 835, 901, 1071, 1219
PspEI GGTNACC 1 cut(s) 1829
PspGI CCWGG 6 cut(s) 442, 508, 835, 901, 1071, 1219
PspN4I GGNNCC 2 cut(s) 907, 913
PstNI CAGNNNCTG 1 cut(s) 614
PsuI RGATCY 2 cut(s) 439, 832
RsaI GTAC 7 cut(s) 255, 678, 1035, 1153, 1575, 1776, 2008
RsaNI GTAC 7 cut(s) 254, 677, 1034, 1152, 1574, 1775, 2007
RseI CAYNNNNRTG 4 cut(s) 989, 1611, 1782, 1974
SacI GAGCTC 1 cut(s) 2001
SaqAI TTAA 6 cut(s) 186, 923, 1611, 1788, 2028, 2163
SatI GCNGC 4 cut(s) 506, 647, 882, 899
Sau3AI GATC 8 cut(s) 148, 439, 832, 1000, 1507, 1552, 1651, 2101
ScaI AGTACT 3 cut(s) 255, 678, 1035
SchI GAGTC 2 cut(s) 512, 606
ScrFI CCNGG 7 cut(s) 444, 510, 837, 903, 1073, 1221, 1794
SduI GDGCHC 1 cut(s) 2001
SfaNI GCATC 2 cut(s) 1183, 1873
SfcI CTRYAG 1 cut(s) 2002
SmiMI CAYNNNNRTG 4 cut(s) 989, 1611, 1782, 1974
SmlI CTYRAG 1 cut(s) 587
SmoI CTYRAG 1 cut(s) 587
SsiI CCGC 3 cut(s) 360, 451, 753
SspMI CTAG 3 cut(s) 308, 1499, 2133
SstI GAGCTC 1 cut(s) 2001
StyD4I CCNGG 7 cut(s) 442, 508, 835, 901, 1071, 1219, 1792
StyI CCWWGG 4 cut(s) 176, 666, 1854, 2132
TaaI ACNGT 9 cut(s) 196, 229, 238, 802, 825, 1145, 1516, 1732, 1976
TaqI TCGA 1 cut(s) 2100
TatI WGTACW 4 cut(s) 253, 676, 1033, 2006
TfiI GAWTC 5 cut(s) 416, 862, 1685, 1770, 1979
Tru1I TTAA 6 cut(s) 186, 923, 1611, 1788, 2028, 2163
Tru9I TTAA 6 cut(s) 186, 923, 1611, 1788, 2028, 2163
TscAI CASTG 6 cut(s) 121, 243, 1003, 1735, 1945, 1998
TseFI GTSAC 2 cut(s) 333, 1598
TseI GCWGC 4 cut(s) 505, 646, 881, 898
Tsp45I GTSAC 2 cut(s) 333, 1598
TspRI CASTG 6 cut(s) 121, 243, 1003, 1735, 1945, 1998
Van91I CCANNNNNTGG 2 cut(s) 116, 1549
VspI ATTAAT 1 cut(s) 1611
XapI RAATTY 4 cut(s) 379, 1245, 1394, 1678
XbaI TCTAGA 1 cut(s) 1498
XceI RCATGY 5 cut(s) 277, 475, 700, 1057, 1606
XmaJI CCTAGG 1 cut(s) 2132
XspI CTAG 3 cut(s) 308, 1499, 2133
ZrmI AGTACT 3 cut(s) 255, 678, 1035
Zsp2I ATGCAT 3 cut(s) 702, 1059, 1608
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.